CmoCh04G021930 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G021930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	leucine-rich repeat extensin-like protein 1
Location	Cmo_Chr04: 16247802 .. 16248319 (-)
RNA-Seq Expression	CmoCh04G021930
Synteny	CmoCh04G021930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCACACCTAAACAAGGTTCTCTCCACAATCCTCCTGGCCTTGATCGTTTCCGTCCTTCCGCCGGCGACTAGCTCCGACGACACCTGCCCATATCCCTGCTACCCTCCGCCAACCGGCACCAGCTATCCCACCACTCCGGCCACTCTAACTCCGCCGTCGCAAACAGACTCAGGCTCCTACTCTCCTCCAGCGTACTACTCTCCGCCGGCTGCATATTACCCATATAACCCGCCGCCGTACGATGGCGACAGCTTCGACGGCATCACTCCACCGCCACCGGATCCGATTCTTCCGTACTTCCCTTACTATTACAAGAAGCCTCCTCACAAACCGGAGGATGAATCCGGTGGTACCGCCGTGTCGGAGATCGGAGCTTTTGTATTTATTTGTGTCTCCGTCTTATTGAATTTGATGTAATGGAATAAGGTAGCTACCTGGCTTTAATTTAATTTTTTTCCCCTTTCGTCTGCAGCAGCTATGAATTTTTATTCACAAATTCAAATCATTTATAA

mRNA sequence

ATGGGTTCACACCTAAACAAGGTTCTCTCCACAATCCTCCTGGCCTTGATCGTTTCCGTCCTTCCGCCGGCGACTAGCTCCGACGACACCTGCCCATATCCCTGCTACCCTCCGCCAACCGGCACCAGCTATCCCACCACTCCGGCCACTCTAACTCCGCCGTCGCAAACAGACTCAGGCTCCTACTCTCCTCCAGCGTACTACTCTCCGCCGGCTGCATATTACCCATATAACCCGCCGCCGTACGATGGCGACAGCTTCGACGGCATCACTCCACCGCCACCGGATCCGATTCTTCCGTACTTCCCTTACTATTACAAGAAGCCTCCTCACAAACCGGAGGATGAATCCGGTGGTACCGCCGTGTCGGAGATCGGAGCTTTTGTATTTATTTGTGTCTCCGTCTTATTGAATTTGATCAGCTATGAATTTTTATTCACAAATTCAAATCATTTATAA

Coding sequence (CDS)

ATGGGTTCACACCTAAACAAGGTTCTCTCCACAATCCTCCTGGCCTTGATCGTTTCCGTCCTTCCGCCGGCGACTAGCTCCGACGACACCTGCCCATATCCCTGCTACCCTCCGCCAACCGGCACCAGCTATCCCACCACTCCGGCCACTCTAACTCCGCCGTCGCAAACAGACTCAGGCTCCTACTCTCCTCCAGCGTACTACTCTCCGCCGGCTGCATATTACCCATATAACCCGCCGCCGTACGATGGCGACAGCTTCGACGGCATCACTCCACCGCCACCGGATCCGATTCTTCCGTACTTCCCTTACTATTACAAGAAGCCTCCTCACAAACCGGAGGATGAATCCGGTGGTACCGCCGTGTCGGAGATCGGAGCTTTTGTATTTATTTGTGTCTCCGTCTTATTGAATTTGATCAGCTATGAATTTTTATTCACAAATTCAAATCATTTATAA

Protein sequence

MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLISYEFLFTNSNHL

Homology

[Close]

BLAST of CmoCh04G021930 vs. ExPASy TrEMBL
Match: A0A6J1HBK1 (leucine-rich repeat extensin-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111462593 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.4e-72
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60
           MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG
Sbjct: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60

Query: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120
           SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT
Sbjct: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120

Query: 121 AVSEIGAFVFICVSVLLNLI 141
           AVSEIGAFVFICVSVLLNL+
Sbjct: 121 AVSEIGAFVFICVSVLLNLM 140

[Close]

BLAST of CmoCh04G021930 vs. ExPASy TrEMBL
Match: A0A6J1JLQ1 (extensin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111487020 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.5e-67
Identity = 131/140 (93.57%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60
           MGSHLNKVLS ILLALIVSVLPPAT SDDTCPYPCYPPPTGT YP TPAT TPPSQTDSG
Sbjct: 1   MGSHLNKVLSPILLALIVSVLPPATVSDDTCPYPCYPPPTGTGYPATPATRTPPSQTDSG 60

Query: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120
           SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT
Sbjct: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120

Query: 121 AVSEIGAFVFICVSVLLNLI 141
           AVSEIGA VFICVSV LN +
Sbjct: 121 AVSEIGAVVFICVSVFLNFM 140

[Close]

BLAST of CmoCh04G021930 vs. ExPASy TrEMBL
Match: A0A0A0KUZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576580 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 7.1e-46
Identity = 98/138 (71.01%), Postives = 113/138 (81.88%), Query Frame = 0


Query: 9   LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYY 68
           +  +LLAL++++ PPAT SDDTCPYPCYPPPTG S  TTPATL+PPSQT   SYSPPAYY
Sbjct: 9   IPAVLLALVIALFPPATRSDDTCPYPCYPPPTG-SGTTTPATLSPPSQTGYSSYSPPAYY 68

Query: 69  SPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAV----SE 128
           SPPAAYYPYNPP  DG+SFDG+TPPPPDPILPYFPYYYKKPPHKP+DESGG+AV    SE
Sbjct: 69  SPPAAYYPYNPPTSDGNSFDGVTPPPPDPILPYFPYYYKKPPHKPDDESGGSAVAGRKSE 128

Query: 129 IGAFVFICVSVLLNLISY 143
           +G      V + L+L S+
Sbjct: 129 VGLLAGTFVLIALSLFSF 145

[Close]

BLAST of CmoCh04G021930 vs. ExPASy TrEMBL
Match: A0A5D3E4I6 (Proline-rich receptor-like protein kinase PERK8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00110 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.1e-45
Identity = 97/142 (68.31%), Postives = 114/142 (80.28%), Query Frame = 0


Query: 9   LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYY 68
           +  +LLAL++++LPPAT SDDTCPYPCYPPPTG    TTPAT +PPSQ    SYSPPAYY
Sbjct: 5   IPAVLLALVIALLPPATRSDDTCPYPCYPPPTGPG-TTTPATPSPPSQPGYSSYSPPAYY 64

Query: 69  SPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAV----SE 128
           SPPAAYYPYNPPP DG+SFDG+TPPPPDPILPYFPYYYKKPPHKP+DESGG+AV    SE
Sbjct: 65  SPPAAYYPYNPPPSDGNSFDGVTPPPPDPILPYFPYYYKKPPHKPDDESGGSAVAGRKSE 124

Query: 129 IGAFVFICVSVLLNLISYEFLF 147
           +G      V + L+L S+  ++
Sbjct: 125 VGLIAGTFVFIFLSLFSFILMY 145

[Close]

BLAST of CmoCh04G021930 vs. ExPASy TrEMBL
Match: A0A1S3CU56 (proline-rich receptor-like protein kinase PERK8 OS=Cucumis melo OX=3656 GN=LOC103504577 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.1e-45
Identity = 97/142 (68.31%), Postives = 114/142 (80.28%), Query Frame = 0


Query: 9   LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYY 68
           +  +LLAL++++LPPAT SDDTCPYPCYPPPTG    TTPAT +PPSQ    SYSPPAYY
Sbjct: 5   IPAVLLALVIALLPPATRSDDTCPYPCYPPPTGPG-TTTPATPSPPSQPGYSSYSPPAYY 64

Query: 69  SPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAV----SE 128
           SPPAAYYPYNPPP DG+SFDG+TPPPPDPILPYFPYYYKKPPHKP+DESGG+AV    SE
Sbjct: 65  SPPAAYYPYNPPPSDGNSFDGVTPPPPDPILPYFPYYYKKPPHKPDDESGGSAVAGRKSE 124

Query: 129 IGAFVFICVSVLLNLISYEFLF 147
           +G      V + L+L S+  ++
Sbjct: 125 VGLIAGTFVFIFLSLFSFILMY 145

[Close]

BLAST of CmoCh04G021930 vs. NCBI nr
Match: XP_022961992.1 (leucine-rich repeat extensin-like protein 1 [Cucurbita moschata])

HSP 1 Score: 280.8 bits (717), Expect = 7.0e-72
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60
           MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG
Sbjct: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60

Query: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120
           SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT
Sbjct: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120

Query: 121 AVSEIGAFVFICVSVLLNLI 141
           AVSEIGAFVFICVSVLLNL+
Sbjct: 121 AVSEIGAFVFICVSVLLNLM 140

[Close]

BLAST of CmoCh04G021930 vs. NCBI nr
Match: XP_023520931.1 (extensin-1-like [Cucurbita pepo subsp. pepo] >XP_023523091.1 extensin-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.2 bits (705), Expect = 1.7e-70
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60
           MGSHLNKVLSTILLALI+SVLPPATSSDDTCPYPCYPPPTGT YP TPATLTPPSQTDSG
Sbjct: 1   MGSHLNKVLSTILLALILSVLPPATSSDDTCPYPCYPPPTGTGYPATPATLTPPSQTDSG 60

Query: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120
           SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT
Sbjct: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120

Query: 121 AVSEIGAFVFICVSVLLNLI 141
           AVSEIGAFVFICVSVLLNL+
Sbjct: 121 AVSEIGAFVFICVSVLLNLM 140

[Close]

BLAST of CmoCh04G021930 vs. NCBI nr
Match: KAG6601836.1 (hypothetical protein SDJN03_07069, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275.4 bits (703), Expect = 2.9e-70
Identity = 136/140 (97.14%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60
           MGSHLNKVLSTILL LIVSVLPPATSSDDTCPYPCYPPPTGT YP TPATLTPPSQTDSG
Sbjct: 1   MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTGTGYPATPATLTPPSQTDSG 60

Query: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120
           SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT
Sbjct: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120

Query: 121 AVSEIGAFVFICVSVLLNLI 141
           AVSEIGAFVFICVSVLLNL+
Sbjct: 121 AVSEIGAFVFICVSVLLNLM 140

[Close]

BLAST of CmoCh04G021930 vs. NCBI nr
Match: KAG7032542.1 (hypothetical protein SDJN02_06591, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272.7 bits (696), Expect = 1.9e-69
Identity = 135/140 (96.43%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60
           MGSHLNKVLSTILL LIVSVLPPATSSDDTCPYPCYPPPT T YP TPATLTPPSQTDSG
Sbjct: 1   MGSHLNKVLSTILLPLIVSVLPPATSSDDTCPYPCYPPPTDTGYPATPATLTPPSQTDSG 60

Query: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120
           SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT
Sbjct: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120

Query: 121 AVSEIGAFVFICVSVLLNLI 141
           AVSEIGAFVFICVSVLLNL+
Sbjct: 121 AVSEIGAFVFICVSVLLNLM 140

[Close]

BLAST of CmoCh04G021930 vs. NCBI nr
Match: XP_022989991.1 (extensin-2-like [Cucurbita maxima])

HSP 1 Score: 264.6 bits (675), Expect = 5.2e-67
Identity = 131/140 (93.57%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSG 60
           MGSHLNKVLS ILLALIVSVLPPAT SDDTCPYPCYPPPTGT YP TPAT TPPSQTDSG
Sbjct: 1   MGSHLNKVLSPILLALIVSVLPPATVSDDTCPYPCYPPPTGTGYPATPATRTPPSQTDSG 60

Query: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120
           SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT
Sbjct: 61  SYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGT 120

Query: 121 AVSEIGAFVFICVSVLLNLI 141
           AVSEIGA VFICVSV LN +
Sbjct: 121 AVSEIGAVVFICVSVFLNFM 140

[Close]

BLAST of CmoCh04G021930 vs. TAIR 10
Match: AT1G23050.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 72.0 bits (175), Expect = 4.6e-13
Identity = 52/134 (38.81%), Postives = 66/134 (49.25%), Query Frame = 0


Query: 11  TILLALIVSVLPPATSSDDTCPYPCYP-PPTGTSYPTTPATLTPPSQTDSGSYSPPA--- 70
           T++    +   P    SD  CPYPCYP PP G    T   T  PP      +Y  PA   
Sbjct: 12  TLIFVFSLVYFPYLVISDTPCPYPCYPTPPIGGGSSTPSMTQPPPYPPPGVNYPTPAGNL 71

Query: 71  -YYSPPAAYYP-YNPPPYDGDSFDGIT---PPPPDPILPYFPYYYKKPPHKPEDESGGTA 130
             Y PP    P Y  PPY G    G +   PPPP+ ILPYFPYY++KPPH+ +  S  + 
Sbjct: 72  PNYPPPVGNIPNYPSPPYGGGDSSGSSFYGPPPPNAILPYFPYYFRKPPHQTDQTSSSSH 131

Query: 131 VSEIGAFVFICVSV 136
           V+  G +    V+V
Sbjct: 132 VAVPGKWTVRIVAV 145

[Close]

BLAST of CmoCh04G021930 vs. TAIR 10
Match: AT1G70985.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 52/139 (37.41%), Postives = 70/139 (50.36%), Query Frame = 0


Query: 9   LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYY 68
           L ++L    + + P  T S   CPYPC P P   +  T PA   P          P  YY
Sbjct: 8   LISLLFVFSLVMFPFITISQTPCPYPCNPLPIAGTGSTQPAGYYP---------QPTGYY 67

Query: 69  SPPAA----YYPYNPPPYDGDSFDGIT-PPPPDPILPYFPYYYKKPPHKPEDESGGTAVS 128
            PP++     YP +PP Y G+   G   PPPPDPILPYFP+YY+KPPH+  D+S  +  S
Sbjct: 68  PPPSSSNVPNYP-SPPYYGGNPSGGYNGPPPPDPILPYFPFYYRKPPHQ-TDQSSSSMKS 127

Query: 129 EIGAFVFICVSVLLNLISY 143
            +       +  +L L S+
Sbjct: 128 TVKIVTVANLLAVLMLFSW 135

[Close]

BLAST of CmoCh04G021930 vs. TAIR 10
Match: AT5G49280.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 57/156 (36.54%), Postives = 76/156 (48.72%), Query Frame = 0


Query: 9   LSTILLALIVSVLPPATSSDD--------TCPYPC-----YPPPTGTSYPTTPATLTPPS 68
           LST+++ L+VSV P  TS D+        +C  PC      PPP     P+TP T  PP 
Sbjct: 9   LSTLVVMLLVSVTPTVTSKDEVVSCTMCSSCDNPCSPVQSSPPPPSPPPPSTPTTACPPP 68

Query: 69  QTDSGSYSPPAYYSPP------AAYYP----------YNPPPYDGDSFDGITPPPPDPIL 128
            +   S    +YY PP       + YP          Y PPPY G+     TPPPP+PI+
Sbjct: 69  PSPPSSGGGSSYYYPPPSQSGGGSKYPPPYGGGGQGYYYPPPYSGNY---PTPPPPNPIV 128

Query: 129 PYFPYYYKKPPHKPEDESGGTAVSEIGAF--VFICV 134
           PYFP+YY  PP     +   ++ S I A   VF+C+
Sbjct: 129 PYFPFYYHTPPPGSGSDRFMSSYSIIFALFAVFLCL 161

[Close]

BLAST of CmoCh04G021930 vs. TAIR 10
Match: AT3G06750.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 55.8 bits (133), Expect = 3.4e-08
Identity = 48/119 (40.34%), Postives = 59/119 (49.58%), Query Frame = 0


Query: 13  LLALIVSVLPPATSSDDT--------CPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSP 72
           LL L++S+    TS D+T        C  PC P P+  S P  P    P S    GSY  
Sbjct: 12  LLILLMSLPLLVTSKDETVSCTMCSSCDNPCNPVPSSYSPPPPP----PSSSGGGGSY-- 71

Query: 73  PAYYSPP---AAYYPYNPPPYDGDSFDGI----------TPPPPDPILPYFPYYYKKPP 111
             YYSPP   ++     PPPY GD + G           TPPPP+PI+PYFP+YY  PP
Sbjct: 72  --YYSPPPPSSSGGVKYPPPYGGDGYGGYYPPPYYGNYGTPPPPNPIVPYFPFYYHTPP 122

[Close]

BLAST of CmoCh04G021930 vs. TAIR 10
Match: AT4G16140.1 (proline-rich family protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05
Identity = 42/103 (40.78%), Postives = 51/103 (49.51%), Query Frame = 0


Query: 25  TSSDDTC-PYPCYPPPTGTSYPTTPA---TLTPPSQTDSGSYSPPAYYSPPA----AYYP 84
           TS D+ C P P  PPP     P  P+   T  PP  + SG    P YY PPA    +Y P
Sbjct: 35  TSCDNPCQPNPSPPPPPSNPSPPPPSPTTTACPPPPSSSG--GGPYYYYPPASQSGSYRP 94

Query: 85  ---------YNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPP 111
                    Y PPP  G ++     PPP+PI+PYFP+YY  PP
Sbjct: 95  PPSSSSGGYYYPPPKSGGNYP--YTPPPNPIVPYFPFYYYNPP 133

The following BLAST results are available for this feature:

BLAST of CmoCh04G021930 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh04G021930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBK1	3.4e-72	99.29	leucine-rich repeat extensin-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JLQ1	2.5e-67	93.57	extensin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111487020 PE=4 SV=1	[more]
A0A0A0KUZ1	7.1e-46	71.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576580 PE=4 SV=1	[more]
A0A5D3E4I6	2.1e-45	68.31	Proline-rich receptor-like protein kinase PERK8 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CU56	2.1e-45	68.31	proline-rich receptor-like protein kinase PERK8 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CmoCh04G021930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961992.1	7.0e-72	99.29	leucine-rich repeat extensin-like protein 1 [Cucurbita moschata]	[more]
XP_023520931.1	1.7e-70	97.14	extensin-1-like [Cucurbita pepo subsp. pepo] >XP_023523091.1 extensin-1-like [Cu...	[more]
KAG6601836.1	2.9e-70	97.14	hypothetical protein SDJN03_07069, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7032542.1	1.9e-69	96.43	hypothetical protein SDJN02_06591, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022989991.1	5.2e-67	93.57	extensin-2-like [Cucurbita maxima]	[more]

BLAST of CmoCh04G021930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23050.1	4.6e-13	38.81	hydroxyproline-rich glycoprotein family protein	[more]
AT1G70985.1	1.9e-11	37.41	hydroxyproline-rich glycoprotein family protein	[more]
AT5G49280.1	1.9e-11	36.54	hydroxyproline-rich glycoprotein family protein	[more]
AT3G06750.1	3.4e-08	40.34	hydroxyproline-rich glycoprotein family protein	[more]
AT4G16140.1	1.2e-05	40.78	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37702	PROLINE-RICH FAMILY PROTEIN	coord: 3..140
None	No IPR available	PANTHER	PTHR37702:SF1	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	coord: 3..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G021930.1	CmoCh04G021930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity