CmoCh04G021690 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G021690
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionMAG2-interacting protein 2-like
LocationCmo_Chr04: 15795306 .. 15796540 (-)
RNA-Seq ExpressionCmoCh04G021690
SyntenyCmoCh04G021690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGCTCGAACAGAAAGTACTTTACGAAACTCGTCGCCACGCCTCGAGACCATTCCGTCCCAACTATCCTCCTCACCAGGTCCCTACTCAACTCCTTTCTTCTTACCTCTCACTGATTCGAACTATATTACCCCAACTCTGTAGTGTTCAATTTGTTTTTCTCGATTTCCTTGTTGTTGTATTATATGTGGATTTCTCTGTTTGCGTTTAGGCGATCGTGGGTTCCAAATGGAGCTTCCTTTCTCTGTTTCGCATTGGAGGTATGTTGCATTTCTGTGCAATTTTCTTTCGGATTCAATTTTCAGACAAGTTTTTCTCTCCATAAATTGGCCTGTTGCTCAATTGAATTGTCACGCTTGTGTAAATCAATCGTTTTTGAAAGCTTTTACTGTTCAATTGTGATGTAATTGGGATCAATTCAAGTTAAGATGAATAAGAAATGTCGAAAGTTGTTATTGAAGAATGTATATCTTGTGAATGGCTGTGTTCTTAAAATCACTTAGTTGCAAGATAACAATTCTTGATTTGTTCGTGAAGACTGAGCTTCTTGACAATGTTCATTCTTTTGAGATATTCTATGAATTTATTCTTACCTTTCTCCTGATACGTGCAATGGCAGGTAGACTCAGGAATAAATGGATTGGATATAACCAACCGCAGAGAATAGAAAGATCGGTATCATTATTTATTTCTTCAAGCGGGGAACGTGTGGCAGTGGCTGCTGGAAATCAGATAACGATATTGAGGAAGAAAGATGACTACTTGGACTCATTTGGCATTTTTTTGGGTATTGTTTTTCTTATGAATTTCGATCTTCTCATGCATCAGACACCAATGTTATCAGACACAGATAGTTGAGTAAGGAGAGAAAAATAAAAATAGTTTATCTTCATCTTCCCATGCATTAGACACCAATGTTGCTTCATTCACTATGGGAGCATGGTCTGAAAGTTGCAATGTTCTTGGAGTCGTTGATGATACCAATACAATATATTTTATCAAATCAAACGGTGAAGAGATATCAATTATCCAATACTATGGGAGCATGATCTTACTTGTAAGCAATTATCAAGATTGGCTATAAATAAGTTCTTGTTTGTGTAGTATTTAGTTGGGATTTCTAGTTACGTTTTTTTGATCAATCGTGTAATCTGTTCAACTTCTATATTTCAGGTGTACCTTCATCATTGTTGCATCAGATGGTTCTATTTGGCAAATGGAGATCAGTAA

mRNA sequence

ATGGAGGAGCTCGAACAGAAAGTACTTTACGAAACTCGTCGCCACGCCTCGAGACCATTCCGTCCCAACTATCCTCCTCACCAGGCGATCGTGGGTTCCAAATGGAGCTTCCTTTCTCTGTTTCGCATTGGAGGTAGACTCAGGAATAAATGGATTGGATATAACCAACCGCAGAGAATAGAAAGATCGGTATCATTATTTATTTCTTCAAGCGGGGAACGTGTGGCAGTGGCTGCTGGAAATCAGATAACGATATTGAGGAAGAAAGATGACTACTTGGACTCATTTGGCATTTTTTTGGACACCAATGTTGCTTCATTCACTATGGGAGCATGGTCTGAAAGTTGCAATGTTCTTGGAGTCGTTGATGATACCAATACAATATATTTTATCAAATCAAACGGTGAAGAGATATCAATTATCCAATACTATGGGAGCATGATCTTACTTGTGTACCTTCATCATTGTTGCATCAGATGGTTCTATTTGGCAAATGGAGATCAGTAA

Coding sequence (CDS)

ATGGAGGAGCTCGAACAGAAAGTACTTTACGAAACTCGTCGCCACGCCTCGAGACCATTCCGTCCCAACTATCCTCCTCACCAGGCGATCGTGGGTTCCAAATGGAGCTTCCTTTCTCTGTTTCGCATTGGAGGTAGACTCAGGAATAAATGGATTGGATATAACCAACCGCAGAGAATAGAAAGATCGGTATCATTATTTATTTCTTCAAGCGGGGAACGTGTGGCAGTGGCTGCTGGAAATCAGATAACGATATTGAGGAAGAAAGATGACTACTTGGACTCATTTGGCATTTTTTTGGACACCAATGTTGCTTCATTCACTATGGGAGCATGGTCTGAAAGTTGCAATGTTCTTGGAGTCGTTGATGATACCAATACAATATATTTTATCAAATCAAACGGTGAAGAGATATCAATTATCCAATACTATGGGAGCATGATCTTACTTGTGTACCTTCATCATTGTTGCATCAGATGGTTCTATTTGGCAAATGGAGATCAGTAA

Protein sequence

MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRIERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLGVVDDTNTIYFIKSNGEEISIIQYYGSMILLVYLHHCCIRWFYLANGDQ
Homology
[Close]
BLAST of CmoCh04G021690 vs. ExPASy Swiss-Prot
Match: Q9FIN7 (MAG2-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIP2 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-30
Identity = 73/143 (51.05%), Postives = 90/143 (62.94%), Query Frame = 0 

Query: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVG--SKWSFLSLFRIGG--RLRNKWIGYNQ 60
           ME   +KVLYE R HAS P+ P YPP     G  SK    SL  I G  +L+ KW  Y  
Sbjct: 1   MESPGRKVLYEIRHHASLPYVPRYPPLPQADGTNSKGGLRSLVSIKGVSQLKEKWSEYWN 60

Query: 61  PQRIERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESC 120
           P++  + VSLFIS  GE VAV +GN +TILRK DDY    G F  +   SFT G WSE  
Sbjct: 61  PKKTNKPVSLFISPRGELVAVTSGNHVTILRKDDDYRKPCGNFTSSISGSFTSGVWSEKH 120

Query: 121 NVLGVVDDTNTIYFIKSNGEEIS 140
           +VLG+VDD+ T++FI++NGEEIS
Sbjct: 121 DVLGLVDDSETLFFIRANGEEIS 143

[Close]
BLAST of CmoCh04G021690 vs. ExPASy TrEMBL
Match: A0A6J1H5I1 (MAG2-interacting protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111460309 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.1e-92
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 

Query: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRI 60
           MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRI
Sbjct: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRI 60

Query: 61  ERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120
           ERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLG
Sbjct: 61  ERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120

Query: 121 VVDDTNTIYFIKSNGEEISIIQYYGSMILLVYLHHCCIRWFYLANGDQ 169
           VVDDTNTIYFIKSNGEEISIIQYYGSMILLVYLHHCCIRWFYLANGDQ
Sbjct: 121 VVDDTNTIYFIKSNGEEISIIQYYGSMILLVYLHHCCIRWFYLANGDQ 168

[Close]
BLAST of CmoCh04G021690 vs. ExPASy TrEMBL
Match: A0A6J1I6S6 (MAG2-interacting protein 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470491 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.0e-69
Identity = 133/139 (95.68%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRI 60
           MEELE+KVLYETRRHASRPFRPNYPPHQAI GSK SFLSLFRIGGRLR+KWIGYNQ QRI
Sbjct: 1   MEELEEKVLYETRRHASRPFRPNYPPHQAIAGSKGSFLSLFRIGGRLRDKWIGYNQRQRI 60

Query: 61  ERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120
           ERSVSLFISSSGERVAVAAGNQITILRK+DDYLDSFGIFLDTNVASFTMGAWSESCNVLG
Sbjct: 61  ERSVSLFISSSGERVAVAAGNQITILRKEDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120

Query: 121 VVDDTNTIYFIKSNGEEIS 140
           VVDDTNTIYFIKSNGEEIS
Sbjct: 121 VVDDTNTIYFIKSNGEEIS 139

[Close]
BLAST of CmoCh04G021690 vs. ExPASy TrEMBL
Match: A0A6J1H784 (MAG2-interacting protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111460242 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.3e-68
Identity = 131/139 (94.24%), Postives = 133/139 (95.68%), Query Frame = 0 

Query: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRI 60
           MEELEQKVLYETRRHASRPFRPNYPPHQ I GSK SFLSLFRIGGRLR+KWIGYNQPQRI
Sbjct: 1   MEELEQKVLYETRRHASRPFRPNYPPHQVIAGSKGSFLSLFRIGGRLRDKWIGYNQPQRI 60

Query: 61  ERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120
           ER VSLFISSSGERVAVAAGNQITILRK+DDYLD FGIFLDTNV SFTMGAWSESCNVLG
Sbjct: 61  ERLVSLFISSSGERVAVAAGNQITILRKEDDYLDPFGIFLDTNVNSFTMGAWSESCNVLG 120

Query: 121 VVDDTNTIYFIKSNGEEIS 140
           VVDDTNTIYFIKSNGEEIS
Sbjct: 121 VVDDTNTIYFIKSNGEEIS 139

[Close]
BLAST of CmoCh04G021690 vs. ExPASy TrEMBL
Match: A0A6J1I823 (MAG2-interacting protein 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470491 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.3e-68
Identity = 133/140 (95.00%), Postives = 136/140 (97.14%), Query Frame = 0 

Query: 1   MEELEQKVLYETRRHASRPFRPNYPP-HQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQR 60
           MEELE+KVLYETRRHASRPFRPNYPP HQAI GSK SFLSLFRIGGRLR+KWIGYNQ QR
Sbjct: 1   MEELEEKVLYETRRHASRPFRPNYPPHHQAIAGSKGSFLSLFRIGGRLRDKWIGYNQRQR 60

Query: 61  IERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVL 120
           IERSVSLFISSSGERVAVAAGNQITILRK+DDYLDSFGIFLDTNVASFTMGAWSESCNVL
Sbjct: 61  IERSVSLFISSSGERVAVAAGNQITILRKEDDYLDSFGIFLDTNVASFTMGAWSESCNVL 120

Query: 121 GVVDDTNTIYFIKSNGEEIS 140
           GVVDDTNTIYFIKSNGEEIS
Sbjct: 121 GVVDDTNTIYFIKSNGEEIS 140

[Close]
BLAST of CmoCh04G021690 vs. ExPASy TrEMBL
Match: A0A6J1I490 (MAG2-interacting protein 2 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111470491 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67
Identity = 131/139 (94.24%), Postives = 134/139 (96.40%), Query Frame = 0 

Query: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRI 60
           MEELEQKVLYETRRHA+RPF  NYPPHQAI GSK SFLSLFRIGGRLR+KWIGYNQ QRI
Sbjct: 1   MEELEQKVLYETRRHAARPFYSNYPPHQAIAGSKGSFLSLFRIGGRLRDKWIGYNQRQRI 60

Query: 61  ERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120
           ERSVSLFISSSGERVAVAAGNQITILRK+DDYLDSFGIFLDTNVASFTMGAWSESCNVLG
Sbjct: 61  ERSVSLFISSSGERVAVAAGNQITILRKEDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120

Query: 121 VVDDTNTIYFIKSNGEEIS 140
           VVDDTNTIYFIKSNGEEIS
Sbjct: 121 VVDDTNTIYFIKSNGEEIS 139

[Close]
BLAST of CmoCh04G021690 vs. NCBI nr
Match: XP_022959283.1 (MAG2-interacting protein 2-like [Cucurbita moschata])

HSP 1 Score: 349.0 bits (894), Expect = 2.3e-92
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 

Query: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRI 60
           MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRI
Sbjct: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRI 60

Query: 61  ERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120
           ERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLG
Sbjct: 61  ERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120

Query: 121 VVDDTNTIYFIKSNGEEISIIQYYGSMILLVYLHHCCIRWFYLANGDQ 169
           VVDDTNTIYFIKSNGEEISIIQYYGSMILLVYLHHCCIRWFYLANGDQ
Sbjct: 121 VVDDTNTIYFIKSNGEEISIIQYYGSMILLVYLHHCCIRWFYLANGDQ 168

[Close]
BLAST of CmoCh04G021690 vs. NCBI nr
Match: XP_023531844.1 (MAG2-interacting protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 329.7 bits (844), Expect = 1.5e-86
Identity = 159/168 (94.64%), Postives = 161/168 (95.83%), Query Frame = 0 

Query: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRI 60
           MEELEQKVLYET RHASRPF PNYPPHQAI GSKWSFLSLFRIGGRL +KWIGYNQPQRI
Sbjct: 1   MEELEQKVLYETCRHASRPFHPNYPPHQAITGSKWSFLSLFRIGGRLGDKWIGYNQPQRI 60

Query: 61  ERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120
           ERSVSLFISSSGERVAVAAGNQITILRK+DDYLDSFGIFLDTNVASFTMGAWSESCNVLG
Sbjct: 61  ERSVSLFISSSGERVAVAAGNQITILRKEDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120

Query: 121 VVDDTNTIYFIKSNGEEISIIQYYGSMILLVYLHHCCIRWFYLANGDQ 169
           VVDDTNTIYFIKSNGEEISIIQYYGSMILLVYLHHCCI WFY  NGDQ
Sbjct: 121 VVDDTNTIYFIKSNGEEISIIQYYGSMILLVYLHHCCIGWFYSTNGDQ 168

[Close]
BLAST of CmoCh04G021690 vs. NCBI nr
Match: XP_022971815.1 (MAG2-interacting protein 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 271.2 bits (692), Expect = 6.1e-69
Identity = 133/139 (95.68%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRI 60
           MEELE+KVLYETRRHASRPFRPNYPPHQAI GSK SFLSLFRIGGRLR+KWIGYNQ QRI
Sbjct: 1   MEELEEKVLYETRRHASRPFRPNYPPHQAIAGSKGSFLSLFRIGGRLRDKWIGYNQRQRI 60

Query: 61  ERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120
           ERSVSLFISSSGERVAVAAGNQITILRK+DDYLDSFGIFLDTNVASFTMGAWSESCNVLG
Sbjct: 61  ERSVSLFISSSGERVAVAAGNQITILRKEDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120

Query: 121 VVDDTNTIYFIKSNGEEIS 140
           VVDDTNTIYFIKSNGEEIS
Sbjct: 121 VVDDTNTIYFIKSNGEEIS 139

[Close]
BLAST of CmoCh04G021690 vs. NCBI nr
Match: KAG6601818.1 (MAG2-interacting protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 267.7 bits (683), Expect = 6.8e-68
Identity = 131/139 (94.24%), Postives = 133/139 (95.68%), Query Frame = 0 

Query: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRI 60
           MEELEQKVLYETRRHASRPFRPNYPPHQ I GSK SFLSLFRIGGRLR+KWIGYNQPQRI
Sbjct: 1   MEELEQKVLYETRRHASRPFRPNYPPHQVIAGSKGSFLSLFRIGGRLRDKWIGYNQPQRI 60

Query: 61  ERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120
           ER VSLFISSSGERVAVAAGNQITILRK+DDYLD FGIFLDTNV SFTMGAWSESCNVLG
Sbjct: 61  ERLVSLFISSSGERVAVAAGNQITILRKEDDYLDPFGIFLDTNVNSFTMGAWSESCNVLG 120

Query: 121 VVDDTNTIYFIKSNGEEIS 140
           VVDDTNTIYFIKSNGEEIS
Sbjct: 121 VVDDTNTIYFIKSNGEEIS 139

[Close]
BLAST of CmoCh04G021690 vs. NCBI nr
Match: XP_022959174.1 (MAG2-interacting protein 2-like [Cucurbita moschata] >XP_022959184.1 MAG2-interacting protein 2-like [Cucurbita moschata])

HSP 1 Score: 267.7 bits (683), Expect = 6.8e-68
Identity = 131/139 (94.24%), Postives = 133/139 (95.68%), Query Frame = 0 

Query: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVGSKWSFLSLFRIGGRLRNKWIGYNQPQRI 60
           MEELEQKVLYETRRHASRPFRPNYPPHQ I GSK SFLSLFRIGGRLR+KWIGYNQPQRI
Sbjct: 1   MEELEQKVLYETRRHASRPFRPNYPPHQVIAGSKGSFLSLFRIGGRLRDKWIGYNQPQRI 60

Query: 61  ERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESCNVLG 120
           ER VSLFISSSGERVAVAAGNQITILRK+DDYLD FGIFLDTNV SFTMGAWSESCNVLG
Sbjct: 61  ERLVSLFISSSGERVAVAAGNQITILRKEDDYLDPFGIFLDTNVNSFTMGAWSESCNVLG 120

Query: 121 VVDDTNTIYFIKSNGEEIS 140
           VVDDTNTIYFIKSNGEEIS
Sbjct: 121 VVDDTNTIYFIKSNGEEIS 139

[Close]
BLAST of CmoCh04G021690 vs. TAIR 10
Match: AT5G24350.1 (CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31
Identity = 73/143 (51.05%), Postives = 90/143 (62.94%), Query Frame = 0 

Query: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVG--SKWSFLSLFRIGG--RLRNKWIGYNQ 60
           ME   +KVLYE R HAS P+ P YPP     G  SK    SL  I G  +L+ KW  Y  
Sbjct: 1   MESPGRKVLYEIRHHASLPYVPRYPPLPQADGTNSKGGLRSLVSIKGVSQLKEKWSEYWN 60

Query: 61  PQRIERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESC 120
           P++  + VSLFIS  GE VAV +GN +TILRK DDY    G F  +   SFT G WSE  
Sbjct: 61  PKKTNKPVSLFISPRGELVAVTSGNHVTILRKDDDYRKPCGNFTSSISGSFTSGVWSEKH 120

Query: 121 NVLGVVDDTNTIYFIKSNGEEIS 140
           +VLG+VDD+ T++FI++NGEEIS
Sbjct: 121 DVLGLVDDSETLFFIRANGEEIS 143

[Close]
BLAST of CmoCh04G021690 vs. TAIR 10
Match: AT5G24350.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244). )

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31
Identity = 73/143 (51.05%), Postives = 90/143 (62.94%), Query Frame = 0 

Query: 1   MEELEQKVLYETRRHASRPFRPNYPPHQAIVG--SKWSFLSLFRIGG--RLRNKWIGYNQ 60
           ME   +KVLYE R HAS P+ P YPP     G  SK    SL  I G  +L+ KW  Y  
Sbjct: 1   MESPGRKVLYEIRHHASLPYVPRYPPLPQADGTNSKGGLRSLVSIKGVSQLKEKWSEYWN 60

Query: 61  PQRIERSVSLFISSSGERVAVAAGNQITILRKKDDYLDSFGIFLDTNVASFTMGAWSESC 120
           P++  + VSLFIS  GE VAV +GN +TILRK DDY    G F  +   SFT G WSE  
Sbjct: 61  PKKTNKPVSLFISPRGELVAVTSGNHVTILRKDDDYRKPCGNFTSSISGSFTSGVWSEKH 120

Query: 121 NVLGVVDDTNTIYFIKSNGEEIS 140
           +VLG+VDD+ T++FI++NGEEIS
Sbjct: 121 DVLGLVDDSETLFFIRANGEEIS 143

The following BLAST results are available for this feature:
BLAST of CmoCh04G021690 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FIN71.5e-3051.05MAG2-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIP2 PE=1 SV=1[more]
BLAST of CmoCh04G021690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H5I11.1e-92100.00MAG2-interacting protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111460309 PE... [more]
A0A6J1I6S63.0e-6995.68MAG2-interacting protein 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11147049... [more]
A0A6J1H7843.3e-6894.24MAG2-interacting protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111460242 PE... [more]
A0A6J1I8237.3e-6895.00MAG2-interacting protein 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11147049... [more]
A0A6J1I4901.6e-6794.24MAG2-interacting protein 2 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC11147049... [more]
BLAST of CmoCh04G021690 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022959283.12.3e-92100.00MAG2-interacting protein 2-like [Cucurbita moschata][more]
XP_023531844.11.5e-8694.64MAG2-interacting protein 2-like [Cucurbita pepo subsp. pepo][more]
XP_022971815.16.1e-6995.68MAG2-interacting protein 2 isoform X2 [Cucurbita maxima][more]
KAG6601818.16.8e-6894.24MAG2-interacting protein 2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022959174.16.8e-6894.24MAG2-interacting protein 2-like [Cucurbita moschata] >XP_022959184.1 MAG2-intera... [more]
BLAST of CmoCh04G021690 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G24350.11.1e-3151.05CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244); Has 18... [more]
AT5G24350.21.1e-3151.05FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15922NEUROBLASTOMA-AMPLIFIED SEQUENCEcoord: 1..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G021690.1CmoCh04G021690.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport
biological_process GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component GO:0070939 Dsl1/NZR complex
cellular_component GO:0005789 endoplasmic reticulum membrane
molecular_function GO:0000149 SNARE binding