CmoCh04G021380 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G021380
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cmo_Chr04: 14558344 .. 14558847 (+)
RNA-Seq Expression	CmoCh04G021380
Synteny	CmoCh04G021380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGACTCAAACCCTTCCGATCATGGTCGCTTTCATTGCCACTTTCATTTTCCTCCTTGCCCTAACCAACGCTCAAAATGCCCTCGGTGACTACCTCGCGCTTCACAATCGAGCTCGAGCTCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGTCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTGTGGGTGAACGAGAAGCCGCTGTATGATCATGTGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTGCGGCTTGGATGTGCTAGAGTACCCTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGCAACTATATTGGAGAAAAGCCTTATGATTCTTGGGTGGTATGA

mRNA sequence

ATGTGGACTCAAACCCTTCCGATCATGGTCGCTTTCATTGCCACTTTCATTTTCCTCCTTGCCCTAACCAACGCTCAAAATGCCCTCGGTGACTACCTCGCGCTTCACAATCGAGCTCGAGCTCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGTCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTGTGGGTGAACGAGAAGCCGCTGTATGATCATGTGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTGCGGCTTGGATGTGCTAGAGTACCCTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGCAACTATATTGGAGAAAAGCCTTATGATTCTTGGGTGGTATGA

Coding sequence (CDS)

ATGTGGACTCAAACCCTTCCGATCATGGTCGCTTTCATTGCCACTTTCATTTTCCTCCTTGCCCTAACCAACGCTCAAAATGCCCTCGGTGACTACCTCGCGCTTCACAATCGAGCTCGAGCTCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGTCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTGTGGGTGAACGAGAAGCCGCTGTATGATCATGTGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTGCGGCTTGGATGTGCTAGAGTACCCTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGCAACTATATTGGAGAAAAGCCTTATGATTCTTGGGTGGTATGA

Protein sequence

MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGHYTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV

Homology

[Close]

BLAST of CmoCh04G021380 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.7e-50
Identity = 94/157 (59.87%), Postives = 113/157 (71.97%), Query Frame = 0


Query: 6   LPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKR 65
           L  +VA   TF  L+  + AQN+  DYL  HN AR QVGVGPM W N +AAYAQ YA +R
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 66  KGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGHYTQMV 125
            GDC MIHS G YGEN+AA  +P+   A AVK+WV+EK  YD+ SN CVGG CGHYTQ+V
Sbjct: 64  IGDCGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVV 123

Query: 126 WRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPY 163
           WR+SVRLGCARV       F+ CNYDPPGN+IG++P+
Sbjct: 124 WRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of CmoCh04G021380 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.4e-44
Identity = 84/156 (53.85%), Postives = 104/156 (66.67%), Query Frame = 0


Query: 8   IMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKG 67
           ++V+ +  F+ +     AQN+  DYL  HN ARA VGV P+ W + VAAYAQ YA +   
Sbjct: 13  LLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 72

Query: 68  DCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGE-CGHYTQMVW 127
           DC ++HS G YGEN+A G     T A AV++WV+EK  YDH SN C  G+ CGHYTQ+VW
Sbjct: 73  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

Query: 128 RSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPY 163
           R+SVR+GCARV C      V CNYDPPGNY GE PY
Sbjct: 133 RNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of CmoCh04G021380 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.2e-44
Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 9   MVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
           +V+ +  F+ +   ++AQN+  DYL  HN ARA VGV P+ W N VAAYAQ Y  +   D
Sbjct: 14  LVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAAD 73

Query: 69  CAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGE-CGHYTQMVWR 128
           C ++HS G YGEN+A G     T A AV++WV+EK  YDH SN C  G+ CGHYTQ+VWR
Sbjct: 74  CNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWR 133

Query: 129 SSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPY 163
           +SVR+GCARV C      V CNYDPPGN IG+ PY
Sbjct: 134 NSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of CmoCh04G021380 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.6e-43
Identity = 81/154 (52.60%), Postives = 108/154 (70.13%), Query Frame = 0


Query: 9   MVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
           ++ F+A    L+  + AQ++  DYL +HN+AR  VGVGPMQW   VAAYA++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 69  CAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGHYTQMVWRS 128
           C +IHS G YGEN+A G   + +G  AV +WV+EK  Y++ +N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 129 SVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPY 163
           SVRLGCA+V C      + CNYDP GNY+ EKPY
Sbjct: 130 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmoCh04G021380 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 176.8 bits (447), Expect = 2.1e-43
Identity = 83/155 (53.55%), Postives = 103/155 (66.45%), Query Frame = 0


Query: 9   MVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
           +V+ +  F+ +    +AQN+  DYL  HN ARA VGV P+ W + VAAYAQ YA +   D
Sbjct: 14  LVSTLLLFLIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAAD 73

Query: 69  CAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGE-CGHYTQMVWR 128
           C ++HS G YGEN+A G     T A AV++WVNEK  Y H SN C  G+ CGHYTQ+VWR
Sbjct: 74  CNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWR 133

Query: 129 SSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPY 163
           +SVR+GCARV C      V CNYDPPGN IG+ PY
Sbjct: 134 NSVRVGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

[Close]

BLAST of CmoCh04G021380 vs. ExPASy TrEMBL
Match: A0A6J1H4L4 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460100 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.4e-95
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH 120
           YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]

BLAST of CmoCh04G021380 vs. ExPASy TrEMBL
Match: A0A6J1H3H8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460070 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.5e-92
Identity = 162/166 (97.59%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 2   WTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQAY 61
           WTQTLPIMVAFIATFIFLLALTNAQNA GDYLALHNRARAQVGVGPMQWSNTVAAYAQAY
Sbjct: 33  WTQTLPIMVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAY 92

Query: 62  AEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGHY 121
           A+KRKGDCAMIHSTG YGENIAAGYYPEFTGADAVKLWVNEKPLYDH SNKCVGGECGHY
Sbjct: 93  AKKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHY 152

Query: 122 TQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 168
           TQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV
Sbjct: 153 TQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 198

[Close]

BLAST of CmoCh04G021380 vs. ExPASy TrEMBL
Match: A0A6J1H381 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459977 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 5.5e-92
Identity = 161/167 (96.41%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMVAFIATFIFLLALTNAQNA GDYLALHNRARAQVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH 120
           YA+KRKGDCAMIHSTG YGENIAAGYYP+FTGADAVKLWVNEKPLYDH SNKCVGGECGH
Sbjct: 61  YAKKRKGDCAMIHSTGPYGENIAAGYYPKFTGADAVKLWVNEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPY+SWVV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYNSWVV 167

[Close]

BLAST of CmoCh04G021380 vs. ExPASy TrEMBL
Match: A0A6J1H6F3 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460042 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 9.4e-92
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMVAFIATF FLLALTNAQNA GDYLALHNRARAQV +GPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFNFLLALTNAQNAPGDYLALHNRARAQVSIGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH 120
           YAEKRKGDCAMIHSTG YGENIAAGYYPEFTGADAVKLWVNEKPLYDH SNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCAR+PCKANSQFVVCNYDPPGNYIGEKPYDSWVV
Sbjct: 121 YTQMVWRSSVRLGCARIPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]

BLAST of CmoCh04G021380 vs. ExPASy TrEMBL
Match: A0A6J1EQJ7 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436551 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 4.7e-91
Identity = 161/167 (96.41%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMVAFIATFIFLLALTNAQNA GDYL LHNRARAQVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH 120
           YAEKRKGDCAMIHSTG YGENIAAGYYPEFTGADAVKLW NEKPLYDH SNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDS VV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSLVV 167

[Close]

BLAST of CmoCh04G021380 vs. NCBI nr
Match: XP_022958973.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 357.8 bits (917), Expect = 5.0e-95
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH 120
           YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]

BLAST of CmoCh04G021380 vs. NCBI nr
Match: XP_022958926.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 348.6 bits (893), Expect = 3.0e-92
Identity = 162/166 (97.59%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 2   WTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQAY 61
           WTQTLPIMVAFIATFIFLLALTNAQNA GDYLALHNRARAQVGVGPMQWSNTVAAYAQAY
Sbjct: 33  WTQTLPIMVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAY 92

Query: 62  AEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGHY 121
           A+KRKGDCAMIHSTG YGENIAAGYYPEFTGADAVKLWVNEKPLYDH SNKCVGGECGHY
Sbjct: 93  AKKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHY 152

Query: 122 TQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 168
           TQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV
Sbjct: 153 TQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 198

[Close]

BLAST of CmoCh04G021380 vs. NCBI nr
Match: XP_022958826.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 346.7 bits (888), Expect = 1.1e-91
Identity = 161/167 (96.41%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMVAFIATFIFLLALTNAQNA GDYLALHNRARAQVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH 120
           YA+KRKGDCAMIHSTG YGENIAAGYYP+FTGADAVKLWVNEKPLYDH SNKCVGGECGH
Sbjct: 61  YAKKRKGDCAMIHSTGPYGENIAAGYYPKFTGADAVKLWVNEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPY+SWVV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYNSWVV 167

[Close]

BLAST of CmoCh04G021380 vs. NCBI nr
Match: XP_022958894.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 345.9 bits (886), Expect = 1.9e-91
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMVAFIATF FLLALTNAQNA GDYLALHNRARAQV +GPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFNFLLALTNAQNAPGDYLALHNRARAQVSIGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH 120
           YAEKRKGDCAMIHSTG YGENIAAGYYPEFTGADAVKLWVNEKPLYDH SNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCAR+PCKANSQFVVCNYDPPGNYIGEKPYDSWVV
Sbjct: 121 YTQMVWRSSVRLGCARIPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]

BLAST of CmoCh04G021380 vs. NCBI nr
Match: XP_022930064.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022930070.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022954130.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 343.6 bits (880), Expect = 9.7e-91
Identity = 161/167 (96.41%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMVAFIATFIFLLALTNAQNA GDYL LHNRARAQVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH 120
           YAEKRKGDCAMIHSTG YGENIAAGYYPEFTGADAVKLW NEKPLYDH SNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 168
           YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDS VV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSLVV 167

[Close]

BLAST of CmoCh04G021380 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 2.7e-46
Identity = 86/151 (56.95%), Postives = 109/151 (72.19%), Query Frame = 0


Query: 13  IATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMI 72
           I  F+ L+    AQ++  D+LA+HNRARA+VGVGP++W   VAAYA+ YA +RKGDCAM 
Sbjct: 14  ITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMK 73

Query: 73  HSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCV-GGECGHYTQMVWRSSVR 132
           HS+GSYGENIA       TG  AV +WV+E+  YD+ SN C    +CGHYTQ+VWR+S R
Sbjct: 74  HSSGSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSER 133

Query: 133 LGCARVPCKANSQFVVCNYDPPGNYIGEKPY 163
           LGCA+V C     F+ CNYDPPGN++GE PY
Sbjct: 134 LGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of CmoCh04G021380 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 177.2 bits (448), Expect = 1.1e-44
Identity = 81/154 (52.60%), Postives = 108/154 (70.13%), Query Frame = 0


Query: 9   MVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
           ++ F+A    L+  + AQ++  DYL +HN+AR  VGVGPMQW   VAAYA++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 69  CAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGHYTQMVWRS 128
           C +IHS G YGEN+A G   + +G  AV +WV+EK  Y++ +N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 129 SVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPY 163
           SVRLGCA+V C      + CNYDP GNY+ EKPY
Sbjct: 130 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmoCh04G021380 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 176.8 bits (447), Expect = 1.5e-44
Identity = 87/163 (53.37%), Postives = 105/163 (64.42%), Query Frame = 0


Query: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           M T   P +V  I    FL+  TNAQN   DYL  HN ARAQVGV  + W  T+AAYA  
Sbjct: 1   MNTFKTPFLV--IVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALN 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGG-ECG 120
           Y+  RK DC ++HS G YGEN+A G    F+   AVKLWV+EKP Y +  N C GG +C 
Sbjct: 61  YSNFRKADCNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCL 120

Query: 121 HYTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPY 163
           HYTQ+VWR SV++GCARV C     FV CNY+ PGN++GE PY
Sbjct: 121 HYTQVVWRDSVKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmoCh04G021380 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-43
Identity = 81/161 (50.31%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 2   WTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQAY 61
           +++ L I+ A +   +  L    AQ++  DY+  HN+AR+Q+GVGPMQW   +AAYA+ Y
Sbjct: 6   YSRILIILAALVGALVVPL---KAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNY 65

Query: 62  AEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGHY 121
           A + KGDC ++HS G YGEN+A     + +G  AV LWVNEK  Y++ +N C  G CGHY
Sbjct: 66  ANQLKGDCRLVHSRGPYGENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHY 125

Query: 122 TQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPY 163
           TQ+VWR+SVRLGCA+V C      + CNYDPPGNY  +KPY
Sbjct: 126 TQVVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of CmoCh04G021380 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 169.9 bits (429), Expect = 1.8e-42
Identity = 82/143 (57.34%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 27  NALGDY-----LALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGSYGEN 86
           NA GD      L +HN+ARA VGVGPM W+ T+A YAQ+YA +R  DCAM HS G +GEN
Sbjct: 35  NANGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGEN 94

Query: 87  IAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVG-GECGHYTQMVWRSSVRLGCARVPCK 146
           +AAG +   +G  A + W+ EK  YD+ SN C G G CGHYTQ+VWR SVRLGCA V CK
Sbjct: 95  LAAG-WGTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCK 154

Query: 147 ANSQ-FVVCNYDPPGNYIGEKPY 163
            +   +V+C+YDPPGNYIG++PY
Sbjct: 155 NDEYIWVICSYDPPGNYIGQRPY 176

The following BLAST results are available for this feature:

BLAST of CmoCh04G021380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	1.7e-50	59.87	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P08299	2.4e-44	53.85	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
P07053	3.2e-44	53.55	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P33154	1.6e-43	52.60	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
P09042	2.1e-43	53.55	Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3	[more]

BLAST of CmoCh04G021380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H4L4	2.4e-95	100.00	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1H3H8	1.5e-92	97.59	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1H381	5.5e-92	96.41	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1H6F3	9.4e-92	95.81	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1EQJ7	4.7e-91	96.41	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of CmoCh04G021380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958973.1	5.0e-95	100.00	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_022958926.1	3.0e-92	97.59	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_022958826.1	1.1e-91	96.41	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_022958894.1	1.9e-91	95.81	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_022930064.1	9.7e-91	96.41	basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_02293...	[more]

BLAST of CmoCh04G021380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33720.1	2.7e-46	56.95	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	1.1e-44	52.60	pathogenesis-related gene 1	[more]
AT1G50060.1	1.5e-44	53.37	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	1.2e-43	50.31	basic pathogenesis-related protein 1	[more]
AT2G19990.1	1.8e-42	57.34	pathogenesis-related protein-1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 95..108 score: 40.9 coord: 145..158 score: 58.05 coord: 48..66 score: 36.79 coord: 118..134 score: 63.28
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 21..162
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 93..108 score: 30.47 coord: 117..136 score: 49.69 coord: 48..66 score: 27.63
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 27..158 e-value: 1.1E-57 score: 207.6
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..150 e-value: 2.5E-22 score: 80.0
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 24..167 e-value: 2.2E-44 score: 153.3
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 17..163
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 21..162
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 31..162 e-value: 3.31314E-82 score: 237.147
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 119..129
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 145..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G021380.1	CmoCh04G021380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane