CmoCh04G021340 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G021340
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cmo_Chr04: 14402171 .. 14402674 (+)
RNA-Seq Expression	CmoCh04G021340
Synteny	CmoCh04G021340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGACCCAAACCCTTCCAATCATGGCCGCTTTCATGGCCACTTTCATGTTCCTCCTCACCCTAACCAACGCTCAAAACGCCCTCGGTGACTATCTCGCGCTTCACAACCGCGCTCGAGCCCAGGTCGGCATCGGCCCCATGCAATGGAGCAATACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGTCGTACGGGGAAAACATAGCCGTTGGGTACTATCCTGAGTTCACCGGGGTGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTATATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAACTCGGTCCGACTTGGATGTGCTAGAGTGCCCTGTCAGGCTAATTCTCAGTTTGTTGTTTGCAATTACAATCCTCCTGGCAACTATATTGGGGAAAAGCCTTATGATTCTTTGGTGGCTTGA

mRNA sequence

ATGTGGACCCAAACCCTTCCAATCATGGCCGCTTTCATGGCCACTTTCATGTTCCTCCTCACCCTAACCAACGCTCAAAACGCCCTCGGTGACTATCTCGCGCTTCACAACCGCGCTCGAGCCCAGGTCGGCATCGGCCCCATGCAATGGAGCAATACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGTCGTACGGGGAAAACATAGCCGTTGGGTACTATCCTGAGTTCACCGGGGTGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTATATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAACTCGGTCCGACTTGGATGTGCTAGAGTGCCCTGTCAGGCTAATTCTCAGTTTGTTGTTTGCAATTACAATCCTCCTGGCAACTATATTGGGGAAAAGCCTTATGATTCTTTGGTGGCTTGA

Coding sequence (CDS)

ATGTGGACCCAAACCCTTCCAATCATGGCCGCTTTCATGGCCACTTTCATGTTCCTCCTCACCCTAACCAACGCTCAAAACGCCCTCGGTGACTATCTCGCGCTTCACAACCGCGCTCGAGCCCAGGTCGGCATCGGCCCCATGCAATGGAGCAATACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGTCGTACGGGGAAAACATAGCCGTTGGGTACTATCCTGAGTTCACCGGGGTGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTATATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAACTCGGTCCGACTTGGATGTGCTAGAGTGCCCTGTCAGGCTAATTCTCAGTTTGTTGTTTGCAATTACAATCCTCCTGGCAACTATATTGGGGAAAAGCCTTATGATTCTTTGGTGGCTTGA

Protein sequence

MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLVA

Homology

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BLAST of CmoCh04G021340 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.3e-49
Identity = 90/160 (56.25%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 6   LPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQAYAEKR 65
           L  + A   TF  L+  + AQN+  DYL  HN AR QVG+GPM W N +AAYAQ YA +R
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 66  KGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGHYTQMV 125
            GDC MIHS G YGEN+A   +P+     AVK+W +EK  YD+ SN CVGG CGHYTQ+V
Sbjct: 64  IGDCGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVV 123

Query: 126 WRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSL 166
           WRNSVRLGCARV       F+ CNY+PPGN+IG++P+  L
Sbjct: 124 WRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPFGDL 162

[Close]

BLAST of CmoCh04G021340 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.0e-43
Identity = 80/156 (51.28%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 8   IMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQAYAEKRKG 67
           ++ + +  F+ +     AQN+  DYL  HN ARA VG+ P+ W + VAAYAQ YA +   
Sbjct: 13  LLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 72

Query: 68  DCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVW 127
           DC ++HS G YGEN+A G     T   AV++W +EK  YDH SN C  G+ CGHYTQ+VW
Sbjct: 73  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

Query: 128 RNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPY 163
           RNSVR+GCARV C      V CNY+PPGNY GE PY
Sbjct: 133 RNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of CmoCh04G021340 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 7.8e-43
Identity = 79/155 (50.97%), Postives = 101/155 (65.16%), Query Frame = 0


Query: 9   MAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQAYAEKRKGD 68
           + + +  F+ +   ++AQN+  DYL  HN ARA VG+ P+ W N VAAYAQ Y  +   D
Sbjct: 14  LVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAAD 73

Query: 69  CAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVWR 128
           C ++HS G YGEN+A G     T   AV++W +EK  YDH SN C  G+ CGHYTQ+VWR
Sbjct: 74  CNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWR 133

Query: 129 NSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPY 163
           NSVR+GCARV C      V CNY+PPGN IG+ PY
Sbjct: 134 NSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of CmoCh04G021340 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-42
Identity = 80/154 (51.95%), Postives = 108/154 (70.13%), Query Frame = 0


Query: 9   MAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQAYAEKRKGD 68
           +  F+A    L+  + AQ++  DYL +HN+AR  VG+GPMQW   VAAYA++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 69  CAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRN 128
           C +IHS G YGEN+A G   + +GV AV +W +EK  Y++A+N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 129 SVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPY 163
           SVRLGCA+V C      + CNY+P GNY+ EKPY
Sbjct: 130 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmoCh04G021340 vs. ExPASy Swiss-Prot
Match: Q04108 (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-42
Identity = 81/139 (58.27%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 25  AQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGSYGENIAV 84
           AQN+  DYLA+HN ARAQVG+GPM W   +A+ AQ YA  R GDC +IHS    GEN+A 
Sbjct: 24  AQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHS--GAGENLAK 83

Query: 85  GYYPEFTGVDAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVWRNSVRLGCARVPCQANS 144
           G   +FTG  AV+LW +E+P Y++A+N+CVGG+ CGHYTQ+VWRNSVRLGC R  C    
Sbjct: 84  G-GGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVWRNSVRLGCGRARCNNGW 143

Query: 145 QFVVCNYNPPGNYIGEKPY 163
            F+ CNY+P GN++GE+PY
Sbjct: 144 WFISCNYDPVGNWVGERPY 159

[Close]

BLAST of CmoCh04G021340 vs. ExPASy TrEMBL
Match: A0A6J1H4C1 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460033 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.1e-95
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA 60
           MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLVA 168
           YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLVA
Sbjct: 121 YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLVA 167

[Close]

BLAST of CmoCh04G021340 vs. ExPASy TrEMBL
Match: A0A6J1H4L4 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460100 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.2e-88
Identity = 153/166 (92.17%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA 60
           MWTQTLPIM AF+ATF+FLL LTNAQNALGDYLALHNRARAQVG+GPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGSYGENIA GYYPEFTG DAVKLW NEKPLYDH SNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH 120

Query: 121 YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLV 167
           YTQMVWR+SVRLGCARVPC+ANSQFVVCNY+PPGNYIGEKPYDS V
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 166

[Close]

BLAST of CmoCh04G021340 vs. ExPASy TrEMBL
Match: A0A6J1EQJ7 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436551 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.7e-88
Identity = 153/166 (92.17%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA 60
           MWTQTLPIM AF+ATF+FLL LTNAQNA GDYL LHNRARAQVG+GPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTG YGENIA GYYPEFTG DAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLV 167
           YTQMVWR+SVRLGCARVPC+ANSQFVVCNY+PPGNYIGEKPYDSLV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSLV 166

[Close]

BLAST of CmoCh04G021340 vs. ExPASy TrEMBL
Match: A0A6J1H3C4 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460023 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.3e-88
Identity = 155/167 (92.81%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA 60
           MWTQTL IMAAFMATFMFLL LTNAQNA GDYLALHNRARAQV +G MQWSNTVAAYAQA
Sbjct: 1   MWTQTLSIMAAFMATFMFLLALTNAQNAPGDYLALHNRARAQVSVGRMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTG YGENIA GYYPEFTGVDAVKLWANEKP YDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGVDAVKLWANEKPFYDHASNKCVGGECGH 120

Query: 121 YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLVA 168
           YTQMVWR+SVRLGCARVPC+ANSQFVVCNY+PPGNYIGEKPYDSLVA
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSLVA 167

[Close]

BLAST of CmoCh04G021340 vs. ExPASy TrEMBL
Match: A0A6J1IC05 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111473363 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 9.1e-87
Identity = 152/166 (91.57%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA 60
           MWTQTL IMAAFM TF+FLL LT AQNA GDYLALHNRARA+VG+GPMQWSNTVAAYAQA
Sbjct: 28  MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 87

Query: 61  YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTG YGENIAVGYYPEFTG DAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 88  YAEKRKGDCAMIHSTGPYGENIAVGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 147

Query: 121 YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLV 167
           YTQMVWR+SVRLGCARVPC+ANSQFVVCNY+PPGNYIGEKPYDS V
Sbjct: 148 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 193

[Close]

BLAST of CmoCh04G021340 vs. NCBI nr
Match: XP_022958883.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 357.1 bits (915), Expect = 8.4e-95
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA 60
           MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLVA 168
           YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLVA
Sbjct: 121 YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLVA 167

[Close]

BLAST of CmoCh04G021340 vs. NCBI nr
Match: XP_023522017.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.1 bits (858), Expect = 3.4e-88
Identity = 155/166 (93.37%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA 60
           MWTQTLPIMAAFMATFMFLL LTNAQNA  DYLALHNRARAQVG+ PMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMAAFMATFMFLLALTNAQNAPSDYLALHNRARAQVGVDPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTG YGENIA GYYPEFTG DAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLV 167
           YTQMVWR+SVRLGCARVPC+ANSQFVVCNY+PPGNYIGEKPYDSLV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSLV 166

[Close]

BLAST of CmoCh04G021340 vs. NCBI nr
Match: XP_022958973.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 334.7 bits (857), Expect = 4.5e-88
Identity = 153/166 (92.17%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA 60
           MWTQTLPIM AF+ATF+FLL LTNAQNALGDYLALHNRARAQVG+GPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNALGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTGSYGENIA GYYPEFTG DAVKLW NEKPLYDH SNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGSYGENIAAGYYPEFTGADAVKLWVNEKPLYDHVSNKCVGGECGH 120

Query: 121 YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLV 167
           YTQMVWR+SVRLGCARVPC+ANSQFVVCNY+PPGNYIGEKPYDS V
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWV 166

[Close]

BLAST of CmoCh04G021340 vs. NCBI nr
Match: XP_022930064.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022930070.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022954130.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 334.0 bits (855), Expect = 7.7e-88
Identity = 153/166 (92.17%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA 60
           MWTQTLPIM AF+ATF+FLL LTNAQNA GDYL LHNRARAQVG+GPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTG YGENIA GYYPEFTG DAVKLWANEKPLYDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

Query: 121 YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLV 167
           YTQMVWR+SVRLGCARVPC+ANSQFVVCNY+PPGNYIGEKPYDSLV
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSLV 166

[Close]

BLAST of CmoCh04G021340 vs. NCBI nr
Match: XP_022958871.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 332.8 bits (852), Expect = 1.7e-87
Identity = 155/167 (92.81%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQA 60
           MWTQTL IMAAFMATFMFLL LTNAQNA GDYLALHNRARAQV +G MQWSNTVAAYAQA
Sbjct: 1   MWTQTLSIMAAFMATFMFLLALTNAQNAPGDYLALHNRARAQVSVGRMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGH 120
           YAEKRKGDCAMIHSTG YGENIA GYYPEFTGVDAVKLWANEKP YDHASNKCVGGECGH
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGVDAVKLWANEKPFYDHASNKCVGGECGH 120

Query: 121 YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPYDSLVA 168
           YTQMVWR+SVRLGCARVPC+ANSQFVVCNY+PPGNYIGEKPYDSLVA
Sbjct: 121 YTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSLVA 167

[Close]

BLAST of CmoCh04G021340 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 2.7e-46
Identity = 84/148 (56.76%), Postives = 108/148 (72.97%), Query Frame = 0


Query: 16  FMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQAYAEKRKGDCAMIHST 75
           F+ L+    AQ++  D+LA+HNRARA+VG+GP++W   VAAYA+ YA +RKGDCAM HS+
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 76  GSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCV-GGECGHYTQMVWRNSVRLGC 135
           GSYGENIA       TGV AV +W +E+  YD+ SN C    +CGHYTQ+VWRNS RLGC
Sbjct: 77  GSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGC 136

Query: 136 ARVPCQANSQFVVCNYNPPGNYIGEKPY 163
           A+V C     F+ CNY+PPGN++GE PY
Sbjct: 137 AKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of CmoCh04G021340 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 5.9e-46
Identity = 82/146 (56.16%), Postives = 101/146 (69.18%), Query Frame = 0


Query: 18  FLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGS 77
           FL+  TNAQN   DYL  HN ARAQVG+  + W  T+AAYA  Y+  RK DC ++HS G 
Sbjct: 16  FLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGP 75

Query: 78  YGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGG-ECGHYTQMVWRNSVRLGCAR 137
           YGEN+A G    F+ + AVKLW +EKP Y +A N C GG +C HYTQ+VWR+SV++GCAR
Sbjct: 76  YGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGCAR 135

Query: 138 VPCQANSQFVVCNYNPPGNYIGEKPY 163
           V C     FV CNYN PGN++GE PY
Sbjct: 136 VQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmoCh04G021340 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 174.5 bits (441), Expect = 7.2e-44
Identity = 80/154 (51.95%), Postives = 108/154 (70.13%), Query Frame = 0


Query: 9   MAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQAYAEKRKGD 68
           +  F+A    L+  + AQ++  DYL +HN+AR  VG+GPMQW   VAAYA++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 69  CAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRN 128
           C +IHS G YGEN+A G   + +GV AV +W +EK  Y++A+N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 129 SVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPY 163
           SVRLGCA+V C      + CNY+P GNY+ EKPY
Sbjct: 130 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmoCh04G021340 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 173.3 bits (438), Expect = 1.6e-43
Identity = 81/161 (50.31%), Postives = 110/161 (68.32%), Query Frame = 0


Query: 2   WTQTLPIMAAFMATFMFLLTLTNAQNALGDYLALHNRARAQVGIGPMQWSNTVAAYAQAY 61
           +++ L I+AA +     L+    AQ++  DY+  HN+AR+Q+G+GPMQW   +AAYA+ Y
Sbjct: 6   YSRILIILAALVGA---LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNY 65

Query: 62  AEKRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKCVGGECGHY 121
           A + KGDC ++HS G YGEN+A     + +GV AV LW NEK  Y++ +N C  G CGHY
Sbjct: 66  ANQLKGDCRLVHSRGPYGENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHY 125

Query: 122 TQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPY 163
           TQ+VWRNSVRLGCA+V C      + CNY+PPGNY  +KPY
Sbjct: 126 TQVVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of CmoCh04G021340 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 166.4 bits (420), Expect = 2.0e-41
Identity = 77/162 (47.53%), Postives = 105/162 (64.81%), Query Frame = 0


Query: 9   MAAFMATFMFLLTLTNAQNALGD-----YLALHNRARAQVGIGPMQWSNTVAAYAQAYAE 68
           M+      +FLL +     +L +     +L  HN AR +VG+ P+ W + VAAYA +YA 
Sbjct: 1   MSLLKTNILFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYAN 60

Query: 69  KRKGDCAMIHSTGSYGENIAVGYYPEFTGVDAVKLWANEKPLYDHASNKC---VGGECGH 128
           +R  DCA++HS G +GENIA+    E +  DA ++W NEK  YD+ SN C    GG C H
Sbjct: 61  QRINDCALVHSNGPFGENIAMS-SGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLH 120

Query: 129 YTQMVWRNSVRLGCARVPCQANSQFVVCNYNPPGNYIGEKPY 163
           YTQ+VW+N+VRLGCA+V C +   F+ CNY+PPGNYIGEKP+
Sbjct: 121 YTQVVWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

The following BLAST results are available for this feature:

BLAST of CmoCh04G021340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	3.3e-49	56.25	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P08299	6.0e-43	51.28	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
P07053	7.8e-43	50.97	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P33154	1.0e-42	51.95	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
Q04108	1.3e-42	58.27	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]

BLAST of CmoCh04G021340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H4C1	4.1e-95	100.00	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1H4L4	2.2e-88	92.17	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1EQJ7	3.7e-88	92.17	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1H3C4	8.3e-88	92.81	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1IC05	9.1e-87	91.57	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CmoCh04G021340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958883.1	8.4e-95	100.00	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_023522017.1	3.4e-88	93.37	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022958973.1	4.5e-88	92.17	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_022930064.1	7.7e-88	92.17	basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_02293...	[more]
XP_022958871.1	1.7e-87	92.81	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]

BLAST of CmoCh04G021340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33720.1	2.7e-46	56.76	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT1G50060.1	5.9e-46	56.16	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	7.2e-44	51.95	pathogenesis-related gene 1	[more]
AT2G14580.1	1.6e-43	50.31	basic pathogenesis-related protein 1	[more]
AT3G19690.1	2.0e-41	47.53	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 145..158 score: 56.47 coord: 118..134 score: 63.84 coord: 48..66 score: 36.79 coord: 95..108 score: 38.5
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 23..162
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 48..66 score: 27.63 coord: 93..108 score: 33.2 coord: 117..136 score: 51.25
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 27..158 e-value: 1.6E-55 score: 200.4
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..150 e-value: 1.4E-22 score: 80.8
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 24..167 e-value: 2.5E-44 score: 153.1
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 21..163
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 23..162
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 31..162 e-value: 1.221E-80 score: 232.909
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 119..129
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 145..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G021340.1	CmoCh04G021340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane