CmoCh04G021200 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G021200
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	nudix hydrolase 1-like
Location	Cmo_Chr04: 13836809 .. 13837603 (+)
RNA-Seq Expression	CmoCh04G021200
Synteny	CmoCh04G021200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATACCCTCCCAACATTGTGAAGACTTGTGGTGGAAAGACCAAAAAAATGGAGAACCCGGTGGAAGCGGCGGCGGCGGCGGTGCCGAGAGTCGGGGTGGTGGTTTATATCCTGAAGGGAAAGTCAGTGCTGTTGGGTCGAAGGCTGTCCTCCAGCGGTGACTCCAGTCACGCCACATTCGCACTCCCCGGCGGCCATCTCGAATTTGGTGAATCTCTCGTTTTTTGCTCACACTTAAATTTTGATTTCGTTTTAGAGATGGGTACCATTTTTCTAATAAGGGAAATTCCAGGGGAGTCGTTTGAGGAATGTGGTGTGAGAGAGGTGAAGGAAGAGACGGGGTTAGACATTGAGAAAACAGAGTTCCTGACTGCAACAAACAACCCTTTTGTGAATGATCCGAAACCTTCCCATTATGTGGTCATTTTTATGCGCGCAGTTTTATCAGATCCCCTGCAACAGCCTCAGAATCTGGAGCCGAGTAAGTGCGGTGGGTGGGACTGGTACGATTGGGATGATCTTCCAAGCCCTCTGTTTTGGCCTTTAGAGAAGATGGTCAAAAGTGGGTTTAATCCGTTTCCTGTTTGATTGGAGTTGGAGTTTGTAATGGTAATCAACATTAGCTTGCCCTATCTTGTGTTTAGTTTGTAATGCTTTACTTATGTGAATCTGGTATTAATCATACATAAAAAGGGGTCTGTAATAATCAAACTCCTCCCTTTGCTGCCTTTTCTTTCACCACCTTTAAACCATAAATAACTCAACCTAAACCGACCCAACAAAGCAGATGTAGA

mRNA sequence

TTTATACCCTCCCAACATTGTGAAGACTTGTGGTGGAAAGACCAAAAAAATGGAGAACCCGGTGGAAGCGGCGGCGGCGGCGGTGCCGAGAGTCGGGGTGGTGGTTTATATCCTGAAGGGAAAGTCAGTGCTGTTGGGTCGAAGGCTGTCCTCCAGCGGTGACTCCAGTCACGCCACATTCGCACTCCCCGGCGGCCATCTCGAATTTGGGGAGTCGTTTGAGGAATGTGGTGTGAGAGAGGTGAAGGAAGAGACGGGGTTAGACATTGAGAAAACAGAGTTCCTGACTGCAACAAACAACCCTTTTGTGAATGATCCGAAACCTTCCCATTATGTGGTCATTTTTATGCGCGCAGTTTTATCAGATCCCCTGCAACAGCCTCAGAATCTGGAGCCGAGTAAGTGCGGTGGGTGGGACTGGTACGATTGGGATGATCTTCCAAGCCCTCTGTTTTGGCCTTTAGAGAAGATGGTCAAAAGTGGGTTTAATCCGTTTCCTGTTTGATTGGAGTTGGAGTTTGTAATGGTAATCAACATTAGCTTGCCCTATCTTGTGTTTAGTTTGTAATGCTTTACTTATGTGAATCTGGTATTAATCATACATAAAAAGGGGTCTGTAATAATCAAACTCCTCCCTTTGCTGCCTTTTCTTTCACCACCTTTAAACCATAAATAACTCAACCTAAACCGACCCAACAAAGCAGATGTAGA

Coding sequence (CDS)

ATGGAGAACCCGGTGGAAGCGGCGGCGGCGGCGGTGCCGAGAGTCGGGGTGGTGGTTTATATCCTGAAGGGAAAGTCAGTGCTGTTGGGTCGAAGGCTGTCCTCCAGCGGTGACTCCAGTCACGCCACATTCGCACTCCCCGGCGGCCATCTCGAATTTGGGGAGTCGTTTGAGGAATGTGGTGTGAGAGAGGTGAAGGAAGAGACGGGGTTAGACATTGAGAAAACAGAGTTCCTGACTGCAACAAACAACCCTTTTGTGAATGATCCGAAACCTTCCCATTATGTGGTCATTTTTATGCGCGCAGTTTTATCAGATCCCCTGCAACAGCCTCAGAATCTGGAGCCGAGTAAGTGCGGTGGGTGGGACTGGTACGATTGGGATGATCTTCCAAGCCCTCTGTTTTGGCCTTTAGAGAAGATGGTCAAAAGTGGGTTTAATCCGTTTCCTGTTTGA

Protein sequence

MENPVEAAAAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV

Homology

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BLAST of CmoCh04G021200 vs. ExPASy Swiss-Prot
Match: Q9CA40 (Nudix hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=NUDT1 PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.4e-53
Identity = 97/139 (69.78%), Postives = 110/139 (79.14%), Query Frame = 0


Query: 11  AVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETG 70
           A+PRV VVV+IL G S+LLGRR SS G+S   TFALPGGHLEFGESFEEC  REV EETG
Sbjct: 6   AIPRVAVVVFILNGNSILLGRRRSSIGNS---TFALPGGHLEFGESFEECAAREVMEETG 65

Query: 71  LDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL 130
           L IEK + LT TNN F   P PSHYV + +RAVL DP Q+P+N+EP KC GWDWYDW++L
Sbjct: 66  LKIEKMKLLTVTNNVFKEAPTPSHYVSVSIRAVLVDPSQEPKNMEPEKCEGWDWYDWENL 125

Query: 131 PSPLFWPLEKMVKSGFNPF 150
           P PLFWPLEK+  SGFNPF
Sbjct: 126 PKPLFWPLEKLFGSGFNPF 141

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BLAST of CmoCh04G021200 vs. ExPASy Swiss-Prot
Match: M4I1C6 (Geranyl diphosphate phosphohydrolase OS=Rosa hybrid cultivar OX=128735 GN=NUDIX1 PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.4e-51
Identity = 95/149 (63.76%), Postives = 114/149 (76.51%), Query Frame = 0


Query: 2   ENPVEAAAAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECG 61
           E  V A  A   +V VVV +L+G++VLLGRR SS GDS   TF+LP GHLEFGESFEEC 
Sbjct: 4   ETVVVAETAGSIKVAVVVCLLRGQNVLLGRRRSSLGDS---TFSLPSGHLEFGESFEECA 63

Query: 62  VREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGG 121
            RE+KEET LDI K E LT TNN F+++ KPS YV +FMRAVL+DP Q+PQN+EP  C G
Sbjct: 64  ARELKEETDLDIGKIELLTVTNNLFLDEAKPSQYVAVFMRAVLADPRQEPQNIEPEFCDG 123

Query: 122 WDWYDWDDLPSPLFWPLEKMVKSGFNPFP 151
           W WY+WD+LP PLFWPL+ +V+ GFNPFP
Sbjct: 124 WGWYEWDNLPKPLFWPLDNVVQDGFNPFP 149

[Close]

BLAST of CmoCh04G021200 vs. ExPASy Swiss-Prot
Match: Q8BG93 (Nucleotide triphosphate diphosphatase NUDT15 OS=Mus musculus OX=10090 GN=Nudt15 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.8e-21
Identity = 60/143 (41.96%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 13  PRVGVVVYILK---GKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEET 72
           P VGV V +L     + VLLG+R  S G  S   F LPGGHLEFGE++EEC  RE  EE 
Sbjct: 11  PGVGVGVVVLSCEHPRCVLLGKRKGSFGAGS---FQLPGGHLEFGETWEECAQRETWEEA 70

Query: 73  GLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRA-VLSDPLQQPQNLEPSKCGGWDWYDWD 132
           GL ++   F +  N+ FV + +  HYV I M+  V      +P+N+EP K   W+W  W+
Sbjct: 71  GLHLKNVCFASVVNS-FV-EKENYHYVTILMKGEVDMTHDSEPRNMEPEKNESWEWVPWE 130

Query: 133 DLP--SPLFWPLEKMVKSGFNPF 150
           + P    LFW L  + + G++PF
Sbjct: 131 EFPPLDQLFWALRCLKEQGYDPF 148

[Close]

BLAST of CmoCh04G021200 vs. ExPASy Swiss-Prot
Match: Q9NV35 (Nucleotide triphosphate diphosphatase NUDT15 OS=Homo sapiens OX=9606 GN=NUDT15 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-20
Identity = 64/154 (41.56%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 9   AAAVPR-------VGVVVYILK-GKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC 68
           A+A PR       VGVVV   K  + VLLG+R  S G  S   F LPGGHLEFGE++EEC
Sbjct: 3   ASAQPRGRRPGVGVGVVVTSCKHPRCVLLGKRKGSVGAGS---FQLPGGHLEFGETWEEC 62

Query: 69  GVREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRA---VLSDPLQQPQNLEPS 128
             RE  EE  L ++   F +  N+ F+ + +  HYV I M+    V  D   +P+N+EP 
Sbjct: 63  AQRETWEEAALHLKNVHFASVVNS-FI-EKENYHYVTILMKGEVDVTHD--SEPKNVEPE 122

Query: 129 KCGGWDWYDWDDLP--SPLFWPLEKMVKSGFNPF 150
           K   W+W  W++LP    LFW L  + + G++PF
Sbjct: 123 KNESWEWVPWEELPPLDQLFWGLRCLKEQGYDPF 149

[Close]

BLAST of CmoCh04G021200 vs. ExPASy Swiss-Prot
Match: Q58549 (ADP-ribose pyrophosphatase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=nudF PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07
Identity = 43/131 (32.82%), Postives = 68/131 (51.91%), Query Frame = 0


Query: 13  PRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGLD 72
           P V V   I K   +LL +R     +     FALPGG +E GE+ EE  VRE+KEETGL 
Sbjct: 41  PAVAVDGIIEKDNKILLIKR---KNNPFKGCFALPGGFVECGETVEEAVVREIKEETGL- 100

Query: 73  IEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPS 132
           I K + L    +    DP+     ++F+  V+   L+   + + +     +++D ++LP 
Sbjct: 101 IPKVKSLLGVYSSPDRDPRGHVISIVFILDVIGGELKAGDDAKEA-----EFFDLNNLPK 160

Query: 133 PLFWPLEKMVK 144
            L +  EK++K
Sbjct: 161 -LAFDHEKIIK 161

[Close]

BLAST of CmoCh04G021200 vs. ExPASy TrEMBL
Match: A0A6J1EPE6 (nudix hydrolase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436581 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.5e-83
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MENPVEAAAAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC 60
           MENPVEAAAAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC
Sbjct: 1   MENPVEAAAAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC 60

Query: 61  GVREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG 120
           GVREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG
Sbjct: 61  GVREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG 120

Query: 121 GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV 152
           GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
Sbjct: 121 GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV 151

[Close]

BLAST of CmoCh04G021200 vs. ExPASy TrEMBL
Match: A0A6J1I9N4 (nudix hydrolase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111472824 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 135/140 (96.43%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 12  VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL 71
           VPRVGV VYILKG SVLLGRRLSSSGDSSHATFALPGGHLEFGESF+ECGVREVKEETGL
Sbjct: 6   VPRVGVAVYILKGNSVLLGRRLSSSGDSSHATFALPGGHLEFGESFDECGVREVKEETGL 65

Query: 72  DIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 131
           DIEKTEFLT TNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP
Sbjct: 66  DIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 125

Query: 132 SPLFWPLEKMVKSGFNPFPV 152
           SPLFWPLEKM+KSGFNPFPV
Sbjct: 126 SPLFWPLEKMIKSGFNPFPV 145

[Close]

BLAST of CmoCh04G021200 vs. ExPASy TrEMBL
Match: A0A6J1DTS6 (nudix hydrolase 1-like OS=Momordica charantia OX=3673 GN=LOC111023417 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.5e-69
Identity = 125/151 (82.78%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 1   MENPVEAAAAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC 60
           ME       A VPRV VVVYILKG SVLLGRRLSS+GDSSH+TFALPGGHLEFGE+F+EC
Sbjct: 55  MEKTTSGTEAPVPRVAVVVYILKGNSVLLGRRLSSAGDSSHSTFALPGGHLEFGEAFDEC 114

Query: 61  GVREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG 120
            VREVKEETGLDIEKTEFLT TNNPF+NDPKPSHYV IFMRA LSD  QQPQNLEPSKCG
Sbjct: 115 AVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRADLSDAQQQPQNLEPSKCG 174

Query: 121 GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV 152
           GWDWYDW  LP+PLFWPL+KMV+SGFNPFPV
Sbjct: 175 GWDWYDWSHLPNPLFWPLDKMVRSGFNPFPV 205

[Close]

BLAST of CmoCh04G021200 vs. ExPASy TrEMBL
Match: A0A5D3BLX3 (Nudix hydrolase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00150 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.6e-68
Identity = 124/151 (82.12%), Postives = 131/151 (86.75%), Query Frame = 0


Query: 1   MENPVEAAAAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC 60
           ME      A  VPRV VVVYILKGKSVL+GRRLSS+GDS H TFALPGGHLEFGESFEEC
Sbjct: 1   MEKGTAETAVPVPRVAVVVYILKGKSVLMGRRLSSAGDSGHFTFALPGGHLEFGESFEEC 60

Query: 61  GVREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG 120
            VREVKEETGLDIEKTEFLT TN PF+NDPKPSHYV I MRAVLSDP Q PQNLEP+KC 
Sbjct: 61  AVREVKEETGLDIEKTEFLTVTNVPFLNDPKPSHYVTISMRAVLSDPSQVPQNLEPNKCS 120

Query: 121 GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV 152
           GWDWYDWD LP+PLFWP+EKMV+SGFNPFPV
Sbjct: 121 GWDWYDWDHLPNPLFWPMEKMVRSGFNPFPV 151

[Close]

BLAST of CmoCh04G021200 vs. ExPASy TrEMBL
Match: A0A1S3CT01 (nudix hydrolase 1-like OS=Cucumis melo OX=3656 GN=LOC103504605 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.6e-68
Identity = 124/151 (82.12%), Postives = 131/151 (86.75%), Query Frame = 0


Query: 1   MENPVEAAAAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC 60
           ME      A  VPRV VVVYILKGKSVL+GRRLSS+GDS H TFALPGGHLEFGESFEEC
Sbjct: 1   MEKGTAETAVPVPRVAVVVYILKGKSVLMGRRLSSAGDSGHFTFALPGGHLEFGESFEEC 60

Query: 61  GVREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG 120
            VREVKEETGLDIEKTEFLT TN PF+NDPKPSHYV I MRAVLSDP Q PQNLEP+KC 
Sbjct: 61  AVREVKEETGLDIEKTEFLTVTNVPFLNDPKPSHYVTISMRAVLSDPSQVPQNLEPNKCS 120

Query: 121 GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV 152
           GWDWYDWD LP+PLFWP+EKMV+SGFNPFPV
Sbjct: 121 GWDWYDWDHLPNPLFWPMEKMVRSGFNPFPV 151

[Close]

BLAST of CmoCh04G021200 vs. NCBI nr
Match: XP_022930097.1 (nudix hydrolase 1-like [Cucurbita moschata])

HSP 1 Score: 318.5 bits (815), Expect = 3.0e-83
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MENPVEAAAAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC 60
           MENPVEAAAAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC
Sbjct: 1   MENPVEAAAAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC 60

Query: 61  GVREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG 120
           GVREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG
Sbjct: 61  GVREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG 120

Query: 121 GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV 152
           GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
Sbjct: 121 GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV 151

[Close]

BLAST of CmoCh04G021200 vs. NCBI nr
Match: KAG6601762.1 (Nudix hydrolase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315.1 bits (806), Expect = 3.3e-82
Identity = 149/151 (98.68%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MENPVEAAAAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC 60
           MENPVEAAAA VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC
Sbjct: 1   MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC 60

Query: 61  GVREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG 120
           GVREVKEETGLDIEKTEFLT TNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG
Sbjct: 61  GVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG 120

Query: 121 GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV 152
           GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
Sbjct: 121 GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV 151

[Close]

BLAST of CmoCh04G021200 vs. NCBI nr
Match: KAG7032485.1 (Nudix hydrolase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313.9 bits (803), Expect = 7.4e-82
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MENPVEAAAAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEEC 60
           MENPVEAAAA VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFE+C
Sbjct: 1   MENPVEAAAAPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEDC 60

Query: 61  GVREVKEETGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG 120
           GVREVKEETGLDIEKTEFLT TNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG
Sbjct: 61  GVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCG 120

Query: 121 GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV 152
           GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV
Sbjct: 121 GWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV 151

[Close]

BLAST of CmoCh04G021200 vs. NCBI nr
Match: XP_023550111.1 (nudix hydrolase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.4 bits (760), Expect = 7.2e-77
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 12  VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL 71
           VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL
Sbjct: 6   VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL 65

Query: 72  DIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 131
           DIEKTEFLT TNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP
Sbjct: 66  DIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 125

Query: 132 SPLFWPLEKMVKSGFNPFPV 152
           SPLFWPLEKMVKSGFNPFPV
Sbjct: 126 SPLFWPLEKMVKSGFNPFPV 145

[Close]

BLAST of CmoCh04G021200 vs. NCBI nr
Match: XP_022974207.1 (nudix hydrolase 1-like [Cucurbita maxima])

HSP 1 Score: 292.4 bits (747), Expect = 2.3e-75
Identity = 135/140 (96.43%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 12  VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL 71
           VPRVGV VYILKG SVLLGRRLSSSGDSSHATFALPGGHLEFGESF+ECGVREVKEETGL
Sbjct: 6   VPRVGVAVYILKGNSVLLGRRLSSSGDSSHATFALPGGHLEFGESFDECGVREVKEETGL 65

Query: 72  DIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 131
           DIEKTEFLT TNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP
Sbjct: 66  DIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 125

Query: 132 SPLFWPLEKMVKSGFNPFPV 152
           SPLFWPLEKM+KSGFNPFPV
Sbjct: 126 SPLFWPLEKMIKSGFNPFPV 145

[Close]

BLAST of CmoCh04G021200 vs. TAIR 10
Match: AT1G68760.1 (nudix hydrolase 1 )

HSP 1 Score: 209.1 bits (531), Expect = 2.4e-54
Identity = 97/139 (69.78%), Postives = 110/139 (79.14%), Query Frame = 0


Query: 11  AVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETG 70
           A+PRV VVV+IL G S+LLGRR SS G+S   TFALPGGHLEFGESFEEC  REV EETG
Sbjct: 6   AIPRVAVVVFILNGNSILLGRRRSSIGNS---TFALPGGHLEFGESFEECAAREVMEETG 65

Query: 71  LDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL 130
           L IEK + LT TNN F   P PSHYV + +RAVL DP Q+P+N+EP KC GWDWYDW++L
Sbjct: 66  LKIEKMKLLTVTNNVFKEAPTPSHYVSVSIRAVLVDPSQEPKNMEPEKCEGWDWYDWENL 125

Query: 131 PSPLFWPLEKMVKSGFNPF 150
           P PLFWPLEK+  SGFNPF
Sbjct: 126 PKPLFWPLEKLFGSGFNPF 141

[Close]

BLAST of CmoCh04G021200 vs. TAIR 10
Match: AT5G47650.1 (nudix hydrolase homolog 2 )

HSP 1 Score: 41.6 bits (96), Expect = 6.6e-04
Identity = 30/121 (24.79%), Postives = 49/121 (40.50%), Query Frame = 0


Query: 9   AAAVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEE 68
           A A  RVG+  +++     +L  +  +        +  P G +  GE   +  VREVKEE
Sbjct: 107 ANASHRVGIGAFVINHNKEVLVVQEKTGRFQGQGIWKFPTGVVNEGEDIHDGSVREVKEE 166

Query: 69  TGLDIEKTEFLTATNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWD 128
           TG+D E  + L           K   + V  ++     PL    N + S+     W  W+
Sbjct: 167 TGVDTEFDQILAFRQTHKAFFGKSDLFFVCMLK-----PLSLEINAQESEIEAAQWMPWE 222

Query: 129 D 130
           +
Sbjct: 227 E 222

The following BLAST results are available for this feature:

BLAST of CmoCh04G021200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA40	3.4e-53	69.78	Nudix hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=NUDT1 PE=1 SV=1	[more]
M4I1C6	2.4e-51	63.76	Geranyl diphosphate phosphohydrolase OS=Rosa hybrid cultivar OX=128735 GN=NUDIX1...	[more]
Q8BG93	5.8e-21	41.96	Nucleotide triphosphate diphosphatase NUDT15 OS=Mus musculus OX=10090 GN=Nudt15 ...	[more]
Q9NV35	1.3e-20	41.56	Nucleotide triphosphate diphosphatase NUDT15 OS=Homo sapiens OX=9606 GN=NUDT15 P...	[more]
Q58549	1.6e-07	32.82	ADP-ribose pyrophosphatase OS=Methanocaldococcus jannaschii (strain ATCC 43067 /...	[more]

BLAST of CmoCh04G021200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EPE6	1.5e-83	100.00	nudix hydrolase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436581 PE=4 SV=1	[more]
A0A6J1I9N4	1.1e-75	96.43	nudix hydrolase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111472824 PE=4 SV=1	[more]
A0A6J1DTS6	3.5e-69	82.78	nudix hydrolase 1-like OS=Momordica charantia OX=3673 GN=LOC111023417 PE=3 SV=1	[more]
A0A5D3BLX3	6.6e-68	82.12	Nudix hydrolase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3CT01	6.6e-68	82.12	nudix hydrolase 1-like OS=Cucumis melo OX=3656 GN=LOC103504605 PE=3 SV=1	[more]

BLAST of CmoCh04G021200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930097.1	3.0e-83	100.00	nudix hydrolase 1-like [Cucurbita moschata]	[more]
KAG6601762.1	3.3e-82	98.68	Nudix hydrolase 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032485.1	7.4e-82	98.01	Nudix hydrolase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023550111.1	7.2e-77	99.29	nudix hydrolase 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022974207.1	2.3e-75	96.43	nudix hydrolase 1-like [Cucurbita maxima]	[more]

BLAST of CmoCh04G021200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68760.1	2.4e-54	69.78	nudix hydrolase 1	[more]
AT5G47650.1	6.6e-04	24.79	nudix hydrolase homolog 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020476	NUDIX hydrolase	PRINTS	PR00502	NUDIXFAMILY	coord: 44..58 score: 43.51 coord: 58..73 score: 47.33
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 6..150 e-value: 1.2E-47 score: 163.2
None	No IPR available	PANTHER	PTHR16099	8-OXO-DGTP DIPHOSPHATES NUDT15	coord: 5..150
None	No IPR available	CDD	cd04678	Nudix_Hydrolase_19	coord: 23..140 e-value: 3.71443E-53 score: 162.431
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 14..137 e-value: 5.3E-19 score: 68.5
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 12..148 score: 16.419924
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 11..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G021200.1	CmoCh04G021200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0006203	dGTP catabolic process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0035539	8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
molecular_function	GO:0008413	8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
molecular_function	GO:0019177	dihydroneopterin triphosphate pyrophosphohydrolase activity