Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGCATCTCTCTCCACCAAGCACATCGCGCAATCGGCCTGGGAGGGAATCAAATCCCGTCGGGTCGGTGTACAGCGAGTGCTGGAATCCAACATCGAGCAGCTGCGAAAGGAGCTCTCGGATATTCACTTTAAGGACGGCGAATGCATCGATGATTTTTCAATGCGGAACACGGGGCTCGCCAACAGCAACACCACTCTTGGTGGCAGCATCAGCAAGACAAAAATCGTGAAGAAGATGCTGCAGGTCGTCCCTGATCACCTTAAGCAAGTCGCAATTACAATCGAGACATTACTTGACGAGAACGACCTAACGGTGGAAGAGGTGACCGGAAGACTGCGTAACGTCGAACAGCGGAAGAAAAATACCGTTTCAGCTGTCGACAAGGAGGGTCGTCTACTCCTCATTGAGGAGGAATGGCTTGCACGCCTAAAGCTCCGTGACGGCACCGGCGAGAGCAATGGGCCCTCCAGCCGCAAAGGAGGTAAAAAGCCATATTACGATCTGTGCCCCAGAGATGTTGGTATCTCTCTCCACCAAGCGCACCACGCAATCGGCAGAAGTCATATTACGATCTATGCCCCCAGAGATGCTGGCATCTCTCTCCACCAAGCGCACCGTGCAATCGGCCTGAGAGAGAATCAAATCCCGTCGGGTTCGGTGAACAACGAGTGCGGGAATCCAACATCGAGCAGCTGCGAAAGGAGCTCTTAGAGATTCGCTTTAAGGACGGCGAATCCGTCGATGATTTTTCATTGCGGATCACGGGGCTCGCCAACAGCATCACCACTCTTGGTGGCAGCATCAGCGAGATAGAAATTGTGAAGAAGATGTTGCAGGTCATCCCCGATCACCTTGAGCAAGTCGCGATTTCAATCGAGACATTGCTTGACGTGAACGACCTAACGATGGAAGAGGTGACCGGAAGACTGCGTAACGTCGAGCAGCGGAAGAAAAATACCGTTTCAGCTGTCGACAAGGAGGGTCGTCTACTCCTCACTGAGGAGGAATGGCTTGCACGCCTAAAGCTCCGTGAAGGCACTGGTGAGAGCAATGGGCCCTCCAGCCGCAAAGGCAGTAAGAAGCCATATTACGATCTGTGCCCCAGAGATGTTGGCATCTCTCTCCACCAAGCGCACCGCGCAATCGGCAGAAGCCATATTACAATCTGTGCCCCCAGAGATGCTGGCATCTCTCTCCACCAAGCGCACCGCGCAATCGGCCTGAGAGAGAATCAAATCTCGTCGGGTCGGTGA
mRNA sequence
ATGCTGGCATCTCTCTCCACCAAGCACATCGCGCAATCGGCCTGGGAGGGAATCAAATCCCGTCGGGTCGGTGTACAGCGAGTGCTGGAATCCAACATCGAGCAGCTGCGAAAGGAGCTCTCGGATATTCACTTTAAGGACGGCGAATGCATCGATGATTTTTCAATGCGGAACACGGGGCTCGCCAACAGCAACACCACTCTTGGTGGCAGCATCAGCAAGACAAAAATCGTGAAGAAGATGCTGCAGGTCGTCCCTGATCACCTTAAGCAAGTCGCAATTACAATCGAGACATTACTTGACGAGAACGACCTAACGGTGGAAGAGGTGACCGGAAGACTGCGTAACGTCGAACAGCGGAAGAAAAATACCGTTTCAGCTGTCGACAAGGAGGGTCGTCTACTCCTCATTGAGGAGGAATGGCTTGCACGCCTAAAGCTCCGTGACGGCACCGGCGAGAGCAATGGGCCCTCCAGCCGCAAAGGAGGTAAAAAGCCATATTACGATCTGTGCCCCAGAGATAGATGCTGGCATCTCTCTCCACCAAGCGCACCGTGCAATCGGCCTGAGAGAGAATCAAATCCCGTCGGGTTCGGTGAACAACGAGTGCGGGAATCCAACATCGAGCAGCTGCGAAAGGAGCTCTTAGAGATTCGCTTTAAGGACGGCGAATCCGTCGATGATTTTTCATTGCGGATCACGGGGCTCGCCAACAGCATCACCACTCTTGGTGGCAGCATCAGCGAGATAGAAATTGTGAAGAAGATGTTGCAGGTCATCCCCGATCACCTTGAGCAAGTCGCGATTTCAATCGAGACATTGCTTGACGTGAACGACCTAACGATGGAAGAGGTGACCGGAAGACTGCGTAACGTCGAGCAGCGGAAGAAAAATACCGTTTCAGCTGTCGACAAGGAGGGTCGTCTACTCCTCACTGAGGAGGAATGGCTTGCACGCCTAAAGCTCCGTGAAGGCACTGGTGAGAGCAATGGGCCCTCCAGCCGCAAAGGCAGTAAGAAGCCATATTACGATCTGTGCCCCAGAGATGTTGGCATCTCTCTCCACCAAGCGCACCGCGCAATCGGCAGAAGCCATATTACAATCTGTGCCCCCAGAGATGCTGGCATCTCTCTCCACCAAGCGCACCGCGCAATCGGCCTGAGAGAGAATCAAATCTCGTCGGGTCGGTGA
Coding sequence (CDS)
ATGCTGGCATCTCTCTCCACCAAGCACATCGCGCAATCGGCCTGGGAGGGAATCAAATCCCGTCGGGTCGGTGTACAGCGAGTGCTGGAATCCAACATCGAGCAGCTGCGAAAGGAGCTCTCGGATATTCACTTTAAGGACGGCGAATGCATCGATGATTTTTCAATGCGGAACACGGGGCTCGCCAACAGCAACACCACTCTTGGTGGCAGCATCAGCAAGACAAAAATCGTGAAGAAGATGCTGCAGGTCGTCCCTGATCACCTTAAGCAAGTCGCAATTACAATCGAGACATTACTTGACGAGAACGACCTAACGGTGGAAGAGGTGACCGGAAGACTGCGTAACGTCGAACAGCGGAAGAAAAATACCGTTTCAGCTGTCGACAAGGAGGGTCGTCTACTCCTCATTGAGGAGGAATGGCTTGCACGCCTAAAGCTCCGTGACGGCACCGGCGAGAGCAATGGGCCCTCCAGCCGCAAAGGAGGTAAAAAGCCATATTACGATCTGTGCCCCAGAGATAGATGCTGGCATCTCTCTCCACCAAGCGCACCGTGCAATCGGCCTGAGAGAGAATCAAATCCCGTCGGGTTCGGTGAACAACGAGTGCGGGAATCCAACATCGAGCAGCTGCGAAAGGAGCTCTTAGAGATTCGCTTTAAGGACGGCGAATCCGTCGATGATTTTTCATTGCGGATCACGGGGCTCGCCAACAGCATCACCACTCTTGGTGGCAGCATCAGCGAGATAGAAATTGTGAAGAAGATGTTGCAGGTCATCCCCGATCACCTTGAGCAAGTCGCGATTTCAATCGAGACATTGCTTGACGTGAACGACCTAACGATGGAAGAGGTGACCGGAAGACTGCGTAACGTCGAGCAGCGGAAGAAAAATACCGTTTCAGCTGTCGACAAGGAGGGTCGTCTACTCCTCACTGAGGAGGAATGGCTTGCACGCCTAAAGCTCCGTGAAGGCACTGGTGAGAGCAATGGGCCCTCCAGCCGCAAAGGCAGTAAGAAGCCATATTACGATCTGTGCCCCAGAGATGTTGGCATCTCTCTCCACCAAGCGCACCGCGCAATCGGCAGAAGCCATATTACAATCTGTGCCCCCAGAGATGCTGGCATCTCTCTCCACCAAGCGCACCGCGCAATCGGCCTGAGAGAGAATCAAATCTCGTCGGGTCGGTGA
Protein sequence
MLASLSTKHIAQSAWEGIKSRRVGVQRVLESNIEQLRKELSDIHFKDGECIDDFSMRNTGLANSNTTLGGSISKTKIVKKMLQVVPDHLKQVAITIETLLDENDLTVEEVTGRLRNVEQRKKNTVSAVDKEGRLLLIEEEWLARLKLRDGTGESNGPSSRKGGKKPYYDLCPRDRCWHLSPPSAPCNRPERESNPVGFGEQRVRESNIEQLRKELLEIRFKDGESVDDFSLRITGLANSITTLGGSISEIEIVKKMLQVIPDHLEQVAISIETLLDVNDLTMEEVTGRLRNVEQRKKNTVSAVDKEGRLLLTEEEWLARLKLREGTGESNGPSSRKGSKKPYYDLCPRDVGISLHQAHRAIGRSHITICAPRDAGISLHQAHRAIGLRENQISSGR
Homology
BLAST of CmoCh04G021140 vs. ExPASy TrEMBL
Match:
Q8LMZ0 (Putative lectin receptor kinase OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0013H08.4 PE=4 SV=1)
HSP 1 Score: 193.0 bits (489), Expect = 2.4e-45
Identity = 146/424 (34.43%), Postives = 201/424 (47.41%), Query Frame = 0
Query: 1 MLASLSTKHIAQSAWEGIKSRRVGVQRVLESNIEQLRKELSDIHFKDGECIDDFSMRNTG 60
ML +L+ K A+ AWE +K+ RVGV RV E+ + LR E I K+ E +D+FSMR
Sbjct: 127 MLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFELIRMKESESVDEFSMRLNA 186
Query: 61 LANSNTTLGGSISKTKIVKKMLQVVPDHLKQVAITIETLLDENDLTVEEVTGRLRNVEQR 120
+ N+ LG + + K+V+K L+VVP QVAI IE LLD L++EEVTGRLR VE+R
Sbjct: 187 IVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLDLKTLSIEEVTGRLRTVEER 246
Query: 121 KK--NTVSAVDKEGRLLLIEEEWLARLKLRDGTG---------------------ESNGP 180
+ + VD GRLLL EE+WL R + R G E NG
Sbjct: 247 YRPGDNDGGVD-GGRLLLTEEQWLERRRNRKKNGDTFDKSKVRCYNCQEYGHYSWEKNGS 306
Query: 181 SSRKGGK-------------------------KPYYDLCPRDR----------------C 240
S G Y + R
Sbjct: 307 GSGSGADGSGTDGGNNGGQQIIVQRVMKETAGSVVYPMLTRTNYTDWALVMRVNLQAQGL 366
Query: 241 WHLSPPSAPCNRPERES-----------------------------NPVGFGEQRVRESN 300
W P + +R + + G RVRE+
Sbjct: 367 WSAIEPGYAEYQDDRMALSAILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARVREAK 426
Query: 301 IEQLRKELLEIRFKDGESVDDFSLRITGLANSITTLGGSISEIEIVKKMLQVIPDHLEQV 330
+ LR E IR K+ ESVDDFS+R+ + N++ LG + E ++V+K L+V+P QV
Sbjct: 427 AQTLRNEFELIRMKESESVDDFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQV 486
BLAST of CmoCh04G021140 vs. ExPASy TrEMBL
Match:
Q7G2S6 (Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os10g32150 PE=4 SV=1)
HSP 1 Score: 185.7 bits (470), Expect = 3.9e-43
Identity = 144/439 (32.80%), Postives = 203/439 (46.24%), Query Frame = 0
Query: 1 MLASLSTKHIAQSAWEGIKSRRVGVQRVLESNIEQLRKELSDIHFKDGECIDDFSMRNTG 60
ML +L+ K A+ AWE +K+ RVGV RV E+ + LR E I K+ E +D+FSMR
Sbjct: 127 MLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFELIRMKESESVDEFSMRLNA 186
Query: 61 LANSNTTLGGSISKTKIVKKMLQVVPDHLKQVAITIETLLDENDLTVEEVTGRLRNVEQR 120
+ N+ LG + + K+V+K L+VVP QVAI IE LLD L++EEVTGRLR VE+R
Sbjct: 187 IVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLDLKTLSIEEVTGRLRTVEER 246
Query: 121 KK--NTVSAVDKEGRLLLIEEEWLARLKLR------------------------------ 180
+ + VD GRLLL EE+WL R + R
Sbjct: 247 YRPGDNDGGVD-GGRLLLTEEQWLERRRNRKKNGDTFDKSKHVYLYAYVCVAWSGELAIC 306
Query: 181 ---------------------DGTGESNGPSS----------RKGGKKPYYDLCPRDR-- 240
DG+G G + ++ Y + R
Sbjct: 307 TWVLHGLVSSGWHGSGSGSGADGSGTDGGNNGGQQIIVQRVMKETAGSVVYPMLTRTNYT 366
Query: 241 --------------CWHLSPPSAPCNRPERES---------------------------- 300
W P + +R +
Sbjct: 367 DWALVMRVNLQAQGLWSAIEPGYAEYQDDRMALSAILRAVPPEMLPTLAVKDTAKEAWES 426
Query: 301 -NPVGFGEQRVRESNIEQLRKELLEIRFKDGESVDDFSLRITGLANSITTLGGSISEIEI 330
+ G RVRE+ + LR E IR K+ ESVDDFS+R+ + N++ LG + E ++
Sbjct: 427 VKTMRVGVARVREAKAQTLRNEFELIRMKESESVDDFSMRLNAIVNNLRMLGDPLEEEKV 486
BLAST of CmoCh04G021140 vs. ExPASy TrEMBL
Match:
C7J7K5 (Os10g0459550 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0459550 PE=4 SV=1)
HSP 1 Score: 185.3 bits (469), Expect = 5.1e-43
Identity = 150/455 (32.97%), Postives = 211/455 (46.37%), Query Frame = 0
Query: 1 MLASLSTKHIAQSAWEGIKSRRVGVQRVLESNIEQLRKELSDIHFKDGECIDDFSMRNTG 60
ML +L+ K A+ AWE +K+ RVGV RV E+ + LR E I K+ E +D+FSMR
Sbjct: 133 MLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFELIRMKESESVDEFSMRLNA 192
Query: 61 LANSNTTLGGSISKTKIVKKMLQVVPDHLKQVAITIETLLDENDLTVEEVTGRLRNVEQR 120
+ N+ LG + + K+V+K L+VVP QVAI IE LLD L++EEVTGRLR VE+R
Sbjct: 193 IVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLDLKTLSIEEVTGRLRTVEER 252
Query: 121 KK--NTVSAVDKEGRLLLIEEEWL---------ARLKLR--------------------- 180
+ + VD GRLLL EE+WL +KLR
Sbjct: 253 YRPGDNDGGVD-GGRLLLTEEQWLEPTNVGEDSVLVKLRPSKRDVGVVCGLRSGTTSFVG 312
Query: 181 -------DGTGESNGPSS----------RKGGKKPYYDLCPRDR---------------- 240
DG+G G + ++ Y + R
Sbjct: 313 SGSGSGADGSGTDGGNNGGQQIIVQRVMKETAGSVVYPMLTRTNYTDWALVMRVNLQAQG 372
Query: 241 CWHLSPPSAPCNRPERES-----------------------------NPVGFGEQRVRES 300
W P + +R + + G RVRE+
Sbjct: 373 LWSAIEPGYAEYQDDRMALSAILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARVREA 432
Query: 301 NIEQLRKELLEIRFKDGESVDDFSLRITGLANSITTLGGSISEIEIVKKMLQVIPDHLEQ 360
+ LR E IR K+ ESVDDFS+R+ + N++ LG + E ++V+K L+V+P Q
Sbjct: 433 KAQTLRNEFELIRMKESESVDDFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQ 492
BLAST of CmoCh04G021140 vs. ExPASy TrEMBL
Match:
Q7XPB1 (OSJNBb0026E15.10 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0026E15.10 PE=4 SV=2)
HSP 1 Score: 181.4 bits (459), Expect = 7.3e-42
Identity = 100/176 (56.82%), Postives = 131/176 (74.43%), Query Frame = 0
Query: 1 MLASLSTKHIAQSAWEGIKSRRVGVQRVLESNIEQLRKELSDIHFKDGECIDDFSMRNTG 60
MLA+L+ K AQ AWE IK+RR+GVQRV E+N +QLR+E DI FKD E +DDFSMR G
Sbjct: 105 MLATLAVKETAQEAWEAIKTRRIGVQRVREANAQQLRREFGDILFKDDETVDDFSMRIGG 164
Query: 61 LANSNTTLGGSISKTKIVKKMLQVVPDHLKQVAITIETLLDENDLTVEEVTGRLRNVEQR 120
LAN+ TLG +I++ ++V+K+LQVVP+HL+Q+AI+IETLLD N+L++EEVTGRLR+VEQR
Sbjct: 165 LANNLRTLGDNITEAEVVQKLLQVVPEHLQQIAISIETLLDVNELSLEEVTGRLRSVEQR 224
Query: 121 KKNTVSA----VDKEGRLLLIEEEWLARLK----LRDGTGESNGPSSRKG---GKK 166
K+ +A VD GRLL EEEWLA+ + L+D S+G R+G GKK
Sbjct: 225 KQCKTAAASSRVDANGRLLFTEEEWLAKFRKAASLQDAAHSSSGNGDRRGRGRGKK 280
BLAST of CmoCh04G021140 vs. ExPASy TrEMBL
Match:
A0A5S6RCQ1 (Putative pol polyprotein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0042K08.6 PE=4 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 1.2e-41
Identity = 99/176 (56.25%), Postives = 129/176 (73.30%), Query Frame = 0
Query: 1 MLASLSTKHIAQSAWEGIKSRRVGVQRVLESNIEQLRKELSDIHFKDGECIDDFSMRNTG 60
MLA+L+ K AQ AWE IK+RR+GVQRV E N +QLR+E DI FKDGE +DDFSMR G
Sbjct: 199 MLATLAVKETAQEAWEAIKTRRIGVQRVREVNAQQLRREFGDILFKDGETVDDFSMRIGG 258
Query: 61 LANSNTTLGGSISKTKIVKKMLQVVPDHLKQVAITIETLLDENDLTVEEVTGRLRNVEQR 120
LAN+ TLG +I++ ++V+K+LQVVP+HL+Q+AI+IETLLD N++++EEVTGRLR+VEQR
Sbjct: 259 LANNLRTLGDNITEAEVVQKLLQVVPEHLQQIAISIETLLDVNEVSLEEVTGRLRSVEQR 318
Query: 121 KKNTVSA----VDKEGRLLLIEEEWLARLK----LRDGTGESNGPSSRKG---GKK 166
K+ +A VD GRLL EEEWLA+ + L+D S G +G GKK
Sbjct: 319 KQRKTAAASSQVDANGRLLFTEEEWLAKFRKAASLQDAAHSSGGNGDHRGRGRGKK 374
BLAST of CmoCh04G021140 vs. NCBI nr
Match:
AAM94550.1 (putative lectin receptor kinase [Oryza sativa Japonica Group])
HSP 1 Score: 193.0 bits (489), Expect = 5.0e-45
Identity = 146/424 (34.43%), Postives = 201/424 (47.41%), Query Frame = 0
Query: 1 MLASLSTKHIAQSAWEGIKSRRVGVQRVLESNIEQLRKELSDIHFKDGECIDDFSMRNTG 60
ML +L+ K A+ AWE +K+ RVGV RV E+ + LR E I K+ E +D+FSMR
Sbjct: 127 MLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFELIRMKESESVDEFSMRLNA 186
Query: 61 LANSNTTLGGSISKTKIVKKMLQVVPDHLKQVAITIETLLDENDLTVEEVTGRLRNVEQR 120
+ N+ LG + + K+V+K L+VVP QVAI IE LLD L++EEVTGRLR VE+R
Sbjct: 187 IVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLDLKTLSIEEVTGRLRTVEER 246
Query: 121 KK--NTVSAVDKEGRLLLIEEEWLARLKLRDGTG---------------------ESNGP 180
+ + VD GRLLL EE+WL R + R G E NG
Sbjct: 247 YRPGDNDGGVD-GGRLLLTEEQWLERRRNRKKNGDTFDKSKVRCYNCQEYGHYSWEKNGS 306
Query: 181 SSRKGGK-------------------------KPYYDLCPRDR----------------C 240
S G Y + R
Sbjct: 307 GSGSGADGSGTDGGNNGGQQIIVQRVMKETAGSVVYPMLTRTNYTDWALVMRVNLQAQGL 366
Query: 241 WHLSPPSAPCNRPERES-----------------------------NPVGFGEQRVRESN 300
W P + +R + + G RVRE+
Sbjct: 367 WSAIEPGYAEYQDDRMALSAILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARVREAK 426
Query: 301 IEQLRKELLEIRFKDGESVDDFSLRITGLANSITTLGGSISEIEIVKKMLQVIPDHLEQV 330
+ LR E IR K+ ESVDDFS+R+ + N++ LG + E ++V+K L+V+P QV
Sbjct: 427 AQTLRNEFELIRMKESESVDDFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQV 486
BLAST of CmoCh04G021140 vs. NCBI nr
Match:
AAP54120.2 (retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group])
HSP 1 Score: 185.7 bits (470), Expect = 8.0e-43
Identity = 144/439 (32.80%), Postives = 203/439 (46.24%), Query Frame = 0
Query: 1 MLASLSTKHIAQSAWEGIKSRRVGVQRVLESNIEQLRKELSDIHFKDGECIDDFSMRNTG 60
ML +L+ K A+ AWE +K+ RVGV RV E+ + LR E I K+ E +D+FSMR
Sbjct: 127 MLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFELIRMKESESVDEFSMRLNA 186
Query: 61 LANSNTTLGGSISKTKIVKKMLQVVPDHLKQVAITIETLLDENDLTVEEVTGRLRNVEQR 120
+ N+ LG + + K+V+K L+VVP QVAI IE LLD L++EEVTGRLR VE+R
Sbjct: 187 IVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLDLKTLSIEEVTGRLRTVEER 246
Query: 121 KK--NTVSAVDKEGRLLLIEEEWLARLKLR------------------------------ 180
+ + VD GRLLL EE+WL R + R
Sbjct: 247 YRPGDNDGGVD-GGRLLLTEEQWLERRRNRKKNGDTFDKSKHVYLYAYVCVAWSGELAIC 306
Query: 181 ---------------------DGTGESNGPSS----------RKGGKKPYYDLCPRDR-- 240
DG+G G + ++ Y + R
Sbjct: 307 TWVLHGLVSSGWHGSGSGSGADGSGTDGGNNGGQQIIVQRVMKETAGSVVYPMLTRTNYT 366
Query: 241 --------------CWHLSPPSAPCNRPERES---------------------------- 300
W P + +R +
Sbjct: 367 DWALVMRVNLQAQGLWSAIEPGYAEYQDDRMALSAILRAVPPEMLPTLAVKDTAKEAWES 426
Query: 301 -NPVGFGEQRVRESNIEQLRKELLEIRFKDGESVDDFSLRITGLANSITTLGGSISEIEI 330
+ G RVRE+ + LR E IR K+ ESVDDFS+R+ + N++ LG + E ++
Sbjct: 427 VKTMRVGVARVREAKAQTLRNEFELIRMKESESVDDFSMRLNAIVNNLRMLGDPLEEEKV 486
BLAST of CmoCh04G021140 vs. NCBI nr
Match:
BAH94919.1 (Os10g0459550 [Oryza sativa Japonica Group])
HSP 1 Score: 185.3 bits (469), Expect = 1.0e-42
Identity = 150/455 (32.97%), Postives = 211/455 (46.37%), Query Frame = 0
Query: 1 MLASLSTKHIAQSAWEGIKSRRVGVQRVLESNIEQLRKELSDIHFKDGECIDDFSMRNTG 60
ML +L+ K A+ AWE +K+ RVGV RV E+ + LR E I K+ E +D+FSMR
Sbjct: 133 MLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFELIRMKESESVDEFSMRLNA 192
Query: 61 LANSNTTLGGSISKTKIVKKMLQVVPDHLKQVAITIETLLDENDLTVEEVTGRLRNVEQR 120
+ N+ LG + + K+V+K L+VVP QVAI IE LLD L++EEVTGRLR VE+R
Sbjct: 193 IVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLDLKTLSIEEVTGRLRTVEER 252
Query: 121 KK--NTVSAVDKEGRLLLIEEEWL---------ARLKLR--------------------- 180
+ + VD GRLLL EE+WL +KLR
Sbjct: 253 YRPGDNDGGVD-GGRLLLTEEQWLEPTNVGEDSVLVKLRPSKRDVGVVCGLRSGTTSFVG 312
Query: 181 -------DGTGESNGPSS----------RKGGKKPYYDLCPRDR---------------- 240
DG+G G + ++ Y + R
Sbjct: 313 SGSGSGADGSGTDGGNNGGQQIIVQRVMKETAGSVVYPMLTRTNYTDWALVMRVNLQAQG 372
Query: 241 CWHLSPPSAPCNRPERES-----------------------------NPVGFGEQRVRES 300
W P + +R + + G RVRE+
Sbjct: 373 LWSAIEPGYAEYQDDRMALSAILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARVREA 432
Query: 301 NIEQLRKELLEIRFKDGESVDDFSLRITGLANSITTLGGSISEIEIVKKMLQVIPDHLEQ 360
+ LR E IR K+ ESVDDFS+R+ + N++ LG + E ++V+K L+V+P Q
Sbjct: 433 KAQTLRNEFELIRMKESESVDDFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQ 492
BLAST of CmoCh04G021140 vs. NCBI nr
Match:
CAE03692.2 (OSJNBb0026E15.10 [Oryza sativa Japonica Group])
HSP 1 Score: 181.4 bits (459), Expect = 1.5e-41
Identity = 100/176 (56.82%), Postives = 131/176 (74.43%), Query Frame = 0
Query: 1 MLASLSTKHIAQSAWEGIKSRRVGVQRVLESNIEQLRKELSDIHFKDGECIDDFSMRNTG 60
MLA+L+ K AQ AWE IK+RR+GVQRV E+N +QLR+E DI FKD E +DDFSMR G
Sbjct: 105 MLATLAVKETAQEAWEAIKTRRIGVQRVREANAQQLRREFGDILFKDDETVDDFSMRIGG 164
Query: 61 LANSNTTLGGSISKTKIVKKMLQVVPDHLKQVAITIETLLDENDLTVEEVTGRLRNVEQR 120
LAN+ TLG +I++ ++V+K+LQVVP+HL+Q+AI+IETLLD N+L++EEVTGRLR+VEQR
Sbjct: 165 LANNLRTLGDNITEAEVVQKLLQVVPEHLQQIAISIETLLDVNELSLEEVTGRLRSVEQR 224
Query: 121 KKNTVSA----VDKEGRLLLIEEEWLARLK----LRDGTGESNGPSSRKG---GKK 166
K+ +A VD GRLL EEEWLA+ + L+D S+G R+G GKK
Sbjct: 225 KQCKTAAASSRVDANGRLLFTEEEWLAKFRKAASLQDAAHSSSGNGDRRGRGRGKK 280
BLAST of CmoCh04G021140 vs. NCBI nr
Match:
AAL77140.1 (Putative pol polyprotein [Oryza sativa Japonica Group] >AAP52245.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group])
HSP 1 Score: 180.6 bits (457), Expect = 2.6e-41
Identity = 99/176 (56.25%), Postives = 129/176 (73.30%), Query Frame = 0
Query: 1 MLASLSTKHIAQSAWEGIKSRRVGVQRVLESNIEQLRKELSDIHFKDGECIDDFSMRNTG 60
MLA+L+ K AQ AWE IK+RR+GVQRV E N +QLR+E DI FKDGE +DDFSMR G
Sbjct: 199 MLATLAVKETAQEAWEAIKTRRIGVQRVREVNAQQLRREFGDILFKDGETVDDFSMRIGG 258
Query: 61 LANSNTTLGGSISKTKIVKKMLQVVPDHLKQVAITIETLLDENDLTVEEVTGRLRNVEQR 120
LAN+ TLG +I++ ++V+K+LQVVP+HL+Q+AI+IETLLD N++++EEVTGRLR+VEQR
Sbjct: 259 LANNLRTLGDNITEAEVVQKLLQVVPEHLQQIAISIETLLDVNEVSLEEVTGRLRSVEQR 318
Query: 121 KKNTVSA----VDKEGRLLLIEEEWLARLK----LRDGTGESNGPSSRKG---GKK 166
K+ +A VD GRLL EEEWLA+ + L+D S G +G GKK
Sbjct: 319 KQRKTAAASSQVDANGRLLFTEEEWLAKFRKAASLQDAAHSSGGNGDHRGRGRGKK 374
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Q8LMZ0 | 2.4e-45 | 34.43 | Putative lectin receptor kinase OS=Oryza sativa subsp. japonica OX=39947 GN=OSJN... | [more] |
| Q7G2S6 | 3.9e-43 | 32.80 | Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. jap... | [more] |
| C7J7K5 | 5.1e-43 | 32.97 | Os10g0459550 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0459550 PE... | [more] |
| Q7XPB1 | 7.3e-42 | 56.82 | OSJNBb0026E15.10 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0026E... | [more] |
| A0A5S6RCQ1 | 1.2e-41 | 56.25 | Putative pol polyprotein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0042K... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AAM94550.1 | 5.0e-45 | 34.43 | putative lectin receptor kinase [Oryza sativa Japonica Group] | [more] |
| AAP54120.2 | 8.0e-43 | 32.80 | retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Gro... | [more] |
| BAH94919.1 | 1.0e-42 | 32.97 | Os10g0459550 [Oryza sativa Japonica Group] | [more] |
| CAE03692.2 | 1.5e-41 | 56.82 | OSJNBb0026E15.10 [Oryza sativa Japonica Group] | [more] |
| AAL77140.1 | 2.6e-41 | 56.25 | Putative pol polyprotein [Oryza sativa Japonica Group] >AAP52245.1 retrotranspos... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
