CmoCh04G021020 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G021020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	AP2/ERF and B3 domain-containing transcription factor RAV1-like
Location	Cmo_Chr04: 13302123 .. 13303100 (-)
RNA-Seq Expression	CmoCh04G021020
Synteny	CmoCh04G021020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACAACAAGCTCTTTAGACGACAGCGCCGCCAGTGACTCCACCTCCGTCTCTCCCGTCACCCCATTACTCTTCCACTCCTCCTCCTCCCCCGGAGTACCCCACGACGCCGAATCCCGGAAGCTTCCATCTTCCCGTTTCAAAGGGGTCGTCCCTCAGCCCAACGGCCGATGGGGGGCTCAGATTTACGAGAAGCACCAAAGGGTCTGGTTGGGCACATTCAACCACGAACACCAGGCCGCCAAAGCCTACGACATCGCCGCCCTCCGCTTCCGCGGCCGCGACGCTGTCACCAATTTCAAGCCCGGCGCCTTCTCTTCCGTCGACGCCGCCTTCGAGGCTGACTTTCTCAACTCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACCTACAATGACGAGCTCCAGCAAAGCAAGCGATACGGTGGAGGAACGACGACGACGACGACGACAGCGGCGGCGGCGGCGCACTCTCTCCAGAACGCGGCGTCGGAGTCGGACCGGGAGGTGCTGTTTGAGAAAACCGTGACGCCGAGCGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAGCACGCGGAGAAGAATTTTCCATTGGGGGAAGGGATGGGTTCGGCCAAAGGAGTACTCCTGAATTTCGAGGATATGGGAGGGAAGCTGTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACCAAGGGATGGAGCCGGTTCGTAAAAGAGAAAACCCTCAGAGCCGGGGACGTGGTCCGGTTCCTACGCTCGACCGGCCCGGATAAGAAGCTTTACATCGATGGCAGAGCAGGCGGAGTGAAGCCGGTTCAAGTGGTAAAGCTATTTGGAGTGAATATTTTGGAAGTGCCGGTGGGGTGGTGCGGGAAGAGAGACAGAGAAGGCCTGTCGGAATTAGAAAGGACGAAGAAGCAAAGAATAATCAAAGCATTGTAA

mRNA sequence

ATGGACACAACAAGCTCTTTAGACGACAGCGCCGCCAGTGACTCCACCTCCGTCTCTCCCGTCACCCCATTACTCTTCCACTCCTCCTCCTCCCCCGGAGTACCCCACGACGCCGAATCCCGGAAGCTTCCATCTTCCCGTTTCAAAGGGGTCGTCCCTCAGCCCAACGGCCGATGGGGGGCTCAGATTTACGAGAAGCACCAAAGGGTCTGGTTGGGCACATTCAACCACGAACACCAGGCCGCCAAAGCCTACGACATCGCCGCCCTCCGCTTCCGCGGCCGCGACGCTGTCACCAATTTCAAGCCCGGCGCCTTCTCTTCCGTCGACGCCGCCTTCGAGGCTGACTTTCTCAACTCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACCTACAATGACGAGCTCCAGCAAAGCAAGCGATACGGTGGAGGAACGACGACGACGACGACGACAGCGGCGGCGGCGGCGCACTCTCTCCAGAACGCGGCGTCGGAGTCGGACCGGGAGGTGCTGTTTGAGAAAACCGTGACGCCGAGCGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAGCACGCGGAGAAGAATTTTCCATTGGGGGAAGGGATGGGTTCGGCCAAAGGAGTACTCCTGAATTTCGAGGATATGGGAGGGAAGCTGTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACCAAGGGATGGAGCCGGTTCGTAAAAGAGAAAACCCTCAGAGCCGGGGACGTGGTCCGGTTCCTACGCTCGACCGGCCCGGATAAGAAGCTTTACATCGATGGCAGAGCAGGCGGAGTGAAGCCGGTTCAAGTGGTAAAGCTATTTGGAGTGAATATTTTGGAAGTGCCGGTGGGGTGGTGCGGGAAGAGAGACAGAGAAGGCCTGTCGGAATTAGAAAGGACGAAGAAGCAAAGAATAATCAAAGCATTGTAA

Coding sequence (CDS)

ATGGACACAACAAGCTCTTTAGACGACAGCGCCGCCAGTGACTCCACCTCCGTCTCTCCCGTCACCCCATTACTCTTCCACTCCTCCTCCTCCCCCGGAGTACCCCACGACGCCGAATCCCGGAAGCTTCCATCTTCCCGTTTCAAAGGGGTCGTCCCTCAGCCCAACGGCCGATGGGGGGCTCAGATTTACGAGAAGCACCAAAGGGTCTGGTTGGGCACATTCAACCACGAACACCAGGCCGCCAAAGCCTACGACATCGCCGCCCTCCGCTTCCGCGGCCGCGACGCTGTCACCAATTTCAAGCCCGGCGCCTTCTCTTCCGTCGACGCCGCCTTCGAGGCTGACTTTCTCAACTCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACCTACAATGACGAGCTCCAGCAAAGCAAGCGATACGGTGGAGGAACGACGACGACGACGACGACAGCGGCGGCGGCGGCGCACTCTCTCCAGAACGCGGCGTCGGAGTCGGACCGGGAGGTGCTGTTTGAGAAAACCGTGACGCCGAGCGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAGCACGCGGAGAAGAATTTTCCATTGGGGGAAGGGATGGGTTCGGCCAAAGGAGTACTCCTGAATTTCGAGGATATGGGAGGGAAGCTGTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACCAAGGGATGGAGCCGGTTCGTAAAAGAGAAAACCCTCAGAGCCGGGGACGTGGTCCGGTTCCTACGCTCGACCGGCCCGGATAAGAAGCTTTACATCGATGGCAGAGCAGGCGGAGTGAAGCCGGTTCAAGTGGTAAAGCTATTTGGAGTGAATATTTTGGAAGTGCCGGTGGGGTGGTGCGGGAAGAGAGACAGAGAAGGCCTGTCGGAATTAGAAAGGACGAAGAAGCAAAGAATAATCAAAGCATTGTAA

Protein sequence

MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEVPVGWCGKRDREGLSELERTKKQRIIKAL

Homology

[Close]

BLAST of CmoCh04G021020 vs. ExPASy Swiss-Prot
Match: Q9C6M5 (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana OX=3702 GN=TEM1 PE=1 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 3.0e-91
Identity = 194/310 (62.58%), Postives = 216/310 (69.68%), Query Frame = 0


Query: 37  DAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRD 96
           + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA +YDIA  RFRGRD
Sbjct: 61  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRD 120

Query: 97  AVTNFKPGAFSSVDA-AFEADFLNSHSKLEIVDMLRKHTYNDELQQSKR---YGGGTTTT 156
           AVTNFK    S VD    E+ FL++HSK EIVDMLRKHTY DE +QS+R    G G  + 
Sbjct: 121 AVTNFK----SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGDGKRSG 180

Query: 157 TTTAAAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-------G 216
             TA     ++  A     REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FPL       G
Sbjct: 181 LETATYGNDAVLRA-----REVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMG 240

Query: 217 EGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRS 276
                 KGVL+N ED  GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RS
Sbjct: 241 MNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERS 300

Query: 277 TGPDKKLYIDGRAGGVKPVQVVKLFGVNIL--------EVPVGWCG-KRDRE-GLSELER 326
           TGPD++LYI  +        VV+LFGVNI         +V V   G KR RE  L  L  
Sbjct: 301 TGPDRQLYIHWKVRSSPVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSREDDLFSLGC 360

[Close]

BLAST of CmoCh04G021020 vs. ExPASy Swiss-Prot
Match: Q9ZWM9 (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana OX=3702 GN=RAV1 PE=1 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.7e-91
Identity = 201/346 (58.09%), Postives = 229/346 (66.18%), Query Frame = 0


Query: 4   TSSLDDSAASDST--SVSPVTPL-------LFHSSSSPGVPHD------AESRKLPSSRF 63
           +SS+D+S  S  +      +TP        L+   S   V  D      AESRKLPSS++
Sbjct: 3   SSSVDESTTSTGSICETPAITPAKKSSVGNLYRMGSGSSVVLDSENGVEAESRKLPSSKY 62

Query: 64  KGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSS 123
           KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+A  RFR RDAVTNFK      
Sbjct: 63  KGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDVKMDE 122

Query: 124 VDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQSK--RYGGGTTTTTTTAAAAAHSLQNA 183
                E DFLNSHSK EIVDMLRKHTYN+EL+QSK  R G G  T T   +  ++   + 
Sbjct: 123 ----DEVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVST 182

Query: 184 ASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLW 243
                 E LFEK VTPSDVGKLNRLVIPK HAEK+FPL     S KGVLLNFED+ GK+W
Sbjct: 183 TGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVW 242

Query: 244 RFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYI--DGRAGG-VKP 303
           RFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RS G D++LYI    R+G  +  
Sbjct: 243 RFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSGSDLDA 302

Query: 304 VQVVKLFGVNILEVP-----VGWCGKRDREGLSELERTKKQRIIKA 325
            +V++LFGVNI         VG     D E LS L  +KKQRI  A
Sbjct: 303 GRVLRLFGVNISPESSRNDVVGNKRVNDTEMLS-LVCSKKQRIFHA 343

[Close]

BLAST of CmoCh04G021020 vs. ExPASy Swiss-Prot
Match: P82280 (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana OX=3702 GN=RAV2 PE=1 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.6e-90
Identity = 186/304 (61.18%), Postives = 213/304 (70.07%), Query Frame = 0


Query: 37  DAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRD 96
           + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN + +AA++YDIAA RFRGRD
Sbjct: 54  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRD 113

Query: 97  AVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTA 156
           AV NFK       D A    FL +HSK EIVDMLRKHTY DEL+Q+ +     +      
Sbjct: 114 AVVNFK-NVLEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGK 173

Query: 157 AAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-GEGMGSAKGVL 216
              + + QN      REVLFEK VTPSDVGKLNRLVIPKQHAEK+FPL        KGVL
Sbjct: 174 RNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVL 233

Query: 217 LNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYID 276
           +NFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RSTG +++LYID
Sbjct: 234 INFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYID 293

Query: 277 GRAGG---VKPVQ-VVKLFGVNILEVP-------VGWCG---KRDREGLSELERTKKQRI 326
            +        PVQ VV+LFGV+I  V        V  CG    RD + +  L  +KKQ I
Sbjct: 294 WKVRSGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAI 352

[Close]

BLAST of CmoCh04G021020 vs. ExPASy Swiss-Prot
Match: Q9LS06 (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana OX=3702 GN=ARF14 PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 6.3e-89
Identity = 191/341 (56.01%), Postives = 229/341 (67.16%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDST-----SVSPV---------TPLLFHSSSSPGVPHDAESRKLPSS 60
           MD  SS+D+S+ +  +     S SP          T ++  S +   V  +AESRKLPSS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAF 120
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+AA RFRGRDAVTNFK   F
Sbjct: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTF 120

Query: 121 SSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNA 180
                  E +FLN+HSK EIVDMLRKHTY +EL Q KR   G    TT  A A+  +   
Sbjct: 121 EE-----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTG 180

Query: 181 ASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNF--PLGEGMGSAKGVLLNFEDMGGK 240
              +  E+LFEKTVTPSDVGKLNRLVIPK  AEK+F  PLG    S KG+LLNFED+ GK
Sbjct: 181 FKTA--ELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGK 240

Query: 241 LWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGG---V 300
           +WRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++ F RS   D+K +I  ++     +
Sbjct: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDL 300

Query: 301 KPVQVVKLFGVNILEVPVGWCGKRDREGLSELERTKKQRII 323
           +  +V++LFGV+I  +      K   E L    R KKQR++
Sbjct: 301 ETGRVMRLFGVDI-SLNAVVVVKETTEVLMSSLRCKKQRVL 333

[Close]

BLAST of CmoCh04G021020 vs. ExPASy Swiss-Prot
Match: Q8RZX9 (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0693400 PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.3e-86
Identity = 177/282 (62.77%), Postives = 204/282 (72.34%), Query Frame = 0


Query: 42  KLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNF 101
           KLPSS+FKGVVPQPNGRWGAQIYE+HQRVWLGTF  E  AA+AYD+AA RFRGRDAVTNF
Sbjct: 76  KLPSSKFKGVVPQPNGRWGAQIYERHQRVWLGTFAGEDDAARAYDVAAQRFRGRDAVTNF 135

Query: 102 KPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQSKR-YGGGTTTTTTTAAAAA 161
           +P A +  DAA E  FL + SK E+VDMLRKHTY DEL QSKR +   T +  TT A+ +
Sbjct: 136 RPLAEADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLS 195

Query: 162 HSLQNA-----ASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFP--LGEGMGSAKG 221
           +   ++     A  + R+ LF+KTVTPSDVGKLNRLVIPKQHAEK+FP  L    G +KG
Sbjct: 196 NGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKG 255

Query: 222 VLLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLR---STGPDK 281
           VLLNFED  GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK L AGDVV F R   S G D 
Sbjct: 256 VLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDG 315

Query: 282 KLYID---GRAGGV-----------KPVQVVKLFGVNILEVP 299
           KL+ID    R+ G             PV+ V+LFGV++L  P
Sbjct: 316 KLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAP 357

[Close]

BLAST of CmoCh04G021020 vs. ExPASy TrEMBL
Match: A0A6J1EPB7 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita moschata OX=3662 GN=LOC111436555 PE=3 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.3e-182
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWG 60

Query: 61  AQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNS 120
           AQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNS
Sbjct: 61  AQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNS 120

Query: 121 HSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFEKTV 180
           HSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFEKTV
Sbjct: 121 HSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFEKTV 180

Query: 181 TPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYV 240
           TPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYV
Sbjct: 181 TPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYV 240

Query: 241 LTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEVPVG 300
           LTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEVPVG
Sbjct: 241 LTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEVPVG 300

Query: 301 WCGKRDREGLSELERTKKQRIIKAL 326
           WCGKRDREGLSELERTKKQRIIKAL
Sbjct: 301 WCGKRDREGLSELERTKKQRIIKAL 325

[Close]

BLAST of CmoCh04G021020 vs. ExPASy TrEMBL
Match: A0A6J1IBU1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita maxima OX=3661 GN=LOC111472203 PE=3 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 5.0e-174
Identity = 314/328 (95.73%), Postives = 319/328 (97.26%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSS---PGVPHDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDS ASDSTSVSPVTPLLFHSSSS   PGVP+DAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSTASDSTSVSPVTPLLFHSSSSSSPPGVPYDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFN EHQAAKAYDIAALR+RGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNQEHQAAKAYDIAALRYRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFE 180
           LNSHSKLEIVDMLRKHTYNDELQQSKRYGGG TTTT TA AAAHSL NAASESDREVLFE
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGG-TTTTATATAAAHSLHNAASESDREVLFE 180

Query: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240
           KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ
Sbjct: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240

Query: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEV 300
           SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDG+AGGVKPVQVV+LFGVNILEV
Sbjct: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVRLFGVNILEV 300

Query: 301 PVGWCGKRDREGLSELERTKKQRIIKAL 326
           PVGWCGKRDREGLSELERTKKQR+IKAL
Sbjct: 301 PVGWCGKRDREGLSELERTKKQRMIKAL 327

[Close]

BLAST of CmoCh04G021020 vs. ExPASy TrEMBL
Match: A0A6J1IG08 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita maxima OX=3661 GN=LOC111472990 PE=3 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 1.1e-131
Identity = 250/328 (76.22%), Postives = 276/328 (84.15%), Query Frame = 0


Query: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWGAQIY 64
           SS+D+S+ SDSTS+SP+TPLLFHSS +PG+PH+AESRKLPSSRFKGVVPQPNGRWGAQIY
Sbjct: 29  SSIDESSGSDSTSISPITPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGAQIY 88

Query: 65  EKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKL 124
           EKHQRVWLGTFN EH AA AYDIAALRFRGRDAVTNFK       + A E +FLNSHSKL
Sbjct: 89  EKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDDDDNDAMEGEFLNSHSKL 148

Query: 125 EIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFEKTVTPSD 184
           EIVDMLRKHTYN+ELQQSKR  G         AAA   + ++  +S REVLFEKTVTPSD
Sbjct: 149 EIVDMLRKHTYNEELQQSKRQRG-------AIAAANTPVHHSGVDSKREVLFEKTVTPSD 208

Query: 185 VGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYVLTKG 244
           VGKLNRLVIPKQHAEKNFP GEG+GS KG+LLN EDMGGK+WRFRYSYWNSSQSYVLTKG
Sbjct: 209 VGKLNRLVIPKQHAEKNFPTGEGLGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKG 268

Query: 245 WSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRA---GGVKPVQVVKLFGVNILEV--PV 304
           WSRFVKEK+LRAGDVVRFLRSTG DK+LYIDG+A   GGVK V VVKLFGVNILEV  PV
Sbjct: 269 WSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAVHVVKLFGVNILEVPLPV 328

Query: 305 GWCG--KRDREGLSELERTKKQRIIKAL 326
           G CG   +++  L EL+ +KKQRIIKAL
Sbjct: 329 GRCGGEPKNQGVLLELQPSKKQRIIKAL 349

[Close]

BLAST of CmoCh04G021020 vs. ExPASy TrEMBL
Match: A0A6J1E5P2 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita moschata OX=3662 GN=LOC111430186 PE=3 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.8e-131
Identity = 250/328 (76.22%), Postives = 276/328 (84.15%), Query Frame = 0


Query: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWGAQIY 64
           SS+D+S  SDSTS+SPVTPLLFHSS +PG+PH+AESRKLPSSRFKGVVPQPNGRWGAQIY
Sbjct: 4   SSIDESRGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGAQIY 63

Query: 65  EKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKL 124
           EKHQRVWLGTFN EH AA AYDIAALRFRGRDAVTNFK         A E +FLNSHSKL
Sbjct: 64  EKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDEDDKDAMEGEFLNSHSKL 123

Query: 125 EIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFEKTVTPSD 184
           EIVDMLRKHTYN+EL+QSKR  G         AAA  ++ ++  +S REVLFEKTVTPSD
Sbjct: 124 EIVDMLRKHTYNEELEQSKRQRG-------AIAAANTAVHHSGVDSKREVLFEKTVTPSD 183

Query: 185 VGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYVLTKG 244
           VGKLNRLVIPKQHAEKNFP+GEG+GS KG+LLN EDMGGK+WRFRYSYWNSSQSYVLTKG
Sbjct: 184 VGKLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKG 243

Query: 245 WSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRA---GGVKPVQVVKLFGVNILEV--PV 304
           WSRFVKEK+LRAGDVVRFLRSTG DK+LYIDG+A   GGVK V VVKLFGVNILEV  PV
Sbjct: 244 WSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKATSEGGVKAVHVVKLFGVNILEVPLPV 303

Query: 305 GWCG--KRDREGLSELERTKKQRIIKAL 326
           G CG   +++  L EL+ +KKQRIIKAL
Sbjct: 304 GRCGGEPKNQGVLLELQPSKKQRIIKAL 324

[Close]

BLAST of CmoCh04G021020 vs. ExPASy TrEMBL
Match: A0A5D3BWI9 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00090 PE=3 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 6.7e-126
Identity = 243/324 (75.00%), Postives = 266/324 (82.10%), Query Frame = 0


Query: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWGAQIY 64
           SS+D+S ASDSTS+SPVTPLLFH  SSP    +AESRKLPSSRFKGVVPQPNGRWGAQIY
Sbjct: 4   SSIDESTASDSTSISPVTPLLFH--SSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQIY 63

Query: 65  EKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKL 124
           EKHQRVWLGTFN E+ AAKAYDIAALRFRGRDAVTNFKP      D A EADFLNSHSKL
Sbjct: 64  EKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDHALEADFLNSHSKL 123

Query: 125 EIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFEKTVTPSD 184
           EIVDMLRKHTYN+ELQQSKR+  G      + +   +S   + S+S REVLFEKTVTPSD
Sbjct: 124 EIVDMLRKHTYNEELQQSKRHQRG-AMAVDSGSFPHYSGSGSGSDSKREVLFEKTVTPSD 183

Query: 185 VGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYVLTKG 244
           VGKLNRLVIPKQHAEKNFP+ EG+ S KG+LLNFEDMGGK+WRFRYSYWNSSQSYVLTKG
Sbjct: 184 VGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKG 243

Query: 245 WSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDG---RAGGVKPVQVVKLFGVNILEVPVGW 304
           WSRFVK+ TLRAGDVVRFLRSTGPDK+LYI      A G+KPV VVKLFGVNIL++PV  
Sbjct: 244 WSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPINAPGIKPVHVVKLFGVNILQLPV-- 303

Query: 305 CGKRDREGLSELERTKKQRIIKAL 326
            GK +   L   + TKKQRIIK L
Sbjct: 304 -GKTEGAFLELQQPTKKQRIIKPL 321

[Close]

BLAST of CmoCh04G021020 vs. NCBI nr
Match: XP_022930067.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita moschata])

HSP 1 Score: 648.7 bits (1672), Expect = 2.7e-182
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWG 60

Query: 61  AQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNS 120
           AQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNS
Sbjct: 61  AQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNS 120

Query: 121 HSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFEKTV 180
           HSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFEKTV
Sbjct: 121 HSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFEKTV 180

Query: 181 TPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYV 240
           TPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYV
Sbjct: 181 TPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYV 240

Query: 241 LTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEVPVG 300
           LTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEVPVG
Sbjct: 241 LTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEVPVG 300

Query: 301 WCGKRDREGLSELERTKKQRIIKAL 326
           WCGKRDREGLSELERTKKQRIIKAL
Sbjct: 301 WCGKRDREGLSELERTKKQRIIKAL 325

[Close]

BLAST of CmoCh04G021020 vs. NCBI nr
Match: KAG6601748.1 (AP2/ERF and B3 domain-containing transcription factor ARF14, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 629.0 bits (1621), Expect = 2.2e-176
Identity = 319/328 (97.26%), Postives = 321/328 (97.87%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFH---SSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFH   SSSSPGVPHDAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFE 180
           LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTT  AAAAHSLQNAASESDREVLFE
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTT--AAAAHSLQNAASESDREVLFE 180

Query: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240
           KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKG+LLNFEDMGGKLWRFRYSYWNSSQ
Sbjct: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGLLLNFEDMGGKLWRFRYSYWNSSQ 240

Query: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEV 300
           SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDG+AGGVKPVQVVKLFGVNILEV
Sbjct: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEV 300

Query: 301 PVGWCGKRDREGLSELERTKKQRIIKAL 326
           PVGWCGKRDREGLSELER KKQRI KAL
Sbjct: 301 PVGWCGKRDREGLSELERAKKQRITKAL 326

[Close]

BLAST of CmoCh04G021020 vs. NCBI nr
Match: KAG7032471.1 (AP2/ERF and B3 domain-containing transcription repressor TEM1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 628.6 bits (1620), Expect = 2.9e-176
Identity = 319/328 (97.26%), Postives = 320/328 (97.56%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFH---SSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFH   SSSSPGVPHDAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFE 180
           LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTT   AAAHSLQNAASESDREVLFE
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTT---AAAHSLQNAASESDREVLFE 180

Query: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240
           KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ
Sbjct: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240

Query: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEV 300
           SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDG+AGGVKPVQVVKLFGVNILEV
Sbjct: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEV 300

Query: 301 PVGWCGKRDREGLSELERTKKQRIIKAL 326
           PVGWCGKRDREGLSELER KKQRI KAL
Sbjct: 301 PVGWCGKRDREGLSELERAKKQRITKAL 325

[Close]

BLAST of CmoCh04G021020 vs. NCBI nr
Match: XP_023541268.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 623.6 bits (1607), Expect = 9.4e-175
Identity = 315/328 (96.04%), Postives = 320/328 (97.56%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSS---PGVPHDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFHSSSS   PGVP+DAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFE 180
           LNSHSKLEIVDMLRKHTYNDE+QQSKRYGGGTTTTTT  AAAAHSLQNAASESDREVLFE
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTT--AAAAHSLQNAASESDREVLFE 180

Query: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240
           KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGS KG+LLNFEDMGGKLWRFRYSYWNSSQ
Sbjct: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQ 240

Query: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEV 300
           SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDG+ GGVK VQVVKLFGVNILEV
Sbjct: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGGVKAVQVVKLFGVNILEV 300

Query: 301 PVGWCGKRDREGLSELERTKKQRIIKAL 326
           PVGWCGKRDREGLSELERTKKQRI+KAL
Sbjct: 301 PVGWCGKRDREGLSELERTKKQRIVKAL 326

[Close]

BLAST of CmoCh04G021020 vs. NCBI nr
Match: XP_022973620.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita maxima])

HSP 1 Score: 620.2 bits (1598), Expect = 1.0e-173
Identity = 314/328 (95.73%), Postives = 319/328 (97.26%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSS---PGVPHDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDS ASDSTSVSPVTPLLFHSSSS   PGVP+DAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSTASDSTSVSPVTPLLFHSSSSSSPPGVPYDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFN EHQAAKAYDIAALR+RGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNQEHQAAKAYDIAALRYRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFE 180
           LNSHSKLEIVDMLRKHTYNDELQQSKRYGGG TTTT TA AAAHSL NAASESDREVLFE
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGG-TTTTATATAAAHSLHNAASESDREVLFE 180

Query: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240
           KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ
Sbjct: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240

Query: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEV 300
           SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDG+AGGVKPVQVV+LFGVNILEV
Sbjct: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVRLFGVNILEV 300

Query: 301 PVGWCGKRDREGLSELERTKKQRIIKAL 326
           PVGWCGKRDREGLSELERTKKQR+IKAL
Sbjct: 301 PVGWCGKRDREGLSELERTKKQRMIKAL 327

[Close]

BLAST of CmoCh04G021020 vs. TAIR 10
Match: AT1G25560.1 (AP2/B3 transcription factor family protein )

HSP 1 Score: 336.7 bits (862), Expect = 2.1e-92
Identity = 194/310 (62.58%), Postives = 216/310 (69.68%), Query Frame = 0


Query: 37  DAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRD 96
           + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA +YDIA  RFRGRD
Sbjct: 61  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRD 120

Query: 97  AVTNFKPGAFSSVDA-AFEADFLNSHSKLEIVDMLRKHTYNDELQQSKR---YGGGTTTT 156
           AVTNFK    S VD    E+ FL++HSK EIVDMLRKHTY DE +QS+R    G G  + 
Sbjct: 121 AVTNFK----SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGDGKRSG 180

Query: 157 TTTAAAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-------G 216
             TA     ++  A     REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FPL       G
Sbjct: 181 LETATYGNDAVLRA-----REVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMG 240

Query: 217 EGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRS 276
                 KGVL+N ED  GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RS
Sbjct: 241 MNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERS 300

Query: 277 TGPDKKLYIDGRAGGVKPVQVVKLFGVNIL--------EVPVGWCG-KRDRE-GLSELER 326
           TGPD++LYI  +        VV+LFGVNI         +V V   G KR RE  L  L  
Sbjct: 301 TGPDRQLYIHWKVRSSPVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSREDDLFSLGC 360

[Close]

BLAST of CmoCh04G021020 vs. TAIR 10
Match: AT1G13260.1 (related to ABI3/VP1 1 )

HSP 1 Score: 335.5 bits (859), Expect = 4.8e-92
Identity = 201/346 (58.09%), Postives = 229/346 (66.18%), Query Frame = 0


Query: 4   TSSLDDSAASDST--SVSPVTPL-------LFHSSSSPGVPHD------AESRKLPSSRF 63
           +SS+D+S  S  +      +TP        L+   S   V  D      AESRKLPSS++
Sbjct: 3   SSSVDESTTSTGSICETPAITPAKKSSVGNLYRMGSGSSVVLDSENGVEAESRKLPSSKY 62

Query: 64  KGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSS 123
           KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+A  RFR RDAVTNFK      
Sbjct: 63  KGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDVKMDE 122

Query: 124 VDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQSK--RYGGGTTTTTTTAAAAAHSLQNA 183
                E DFLNSHSK EIVDMLRKHTYN+EL+QSK  R G G  T T   +  ++   + 
Sbjct: 123 ----DEVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVST 182

Query: 184 ASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLW 243
                 E LFEK VTPSDVGKLNRLVIPK HAEK+FPL     S KGVLLNFED+ GK+W
Sbjct: 183 TGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVW 242

Query: 244 RFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYI--DGRAGG-VKP 303
           RFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RS G D++LYI    R+G  +  
Sbjct: 243 RFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSGSDLDA 302

Query: 304 VQVVKLFGVNILEVP-----VGWCGKRDREGLSELERTKKQRIIKA 325
            +V++LFGVNI         VG     D E LS L  +KKQRI  A
Sbjct: 303 GRVLRLFGVNISPESSRNDVVGNKRVNDTEMLS-LVCSKKQRIFHA 343

[Close]

BLAST of CmoCh04G021020 vs. TAIR 10
Match: AT1G68840.1 (related to ABI3/VP1 2 )

HSP 1 Score: 333.6 bits (854), Expect = 1.8e-91
Identity = 186/304 (61.18%), Postives = 213/304 (70.07%), Query Frame = 0


Query: 37  DAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRD 96
           + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN + +AA++YDIAA RFRGRD
Sbjct: 54  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRD 113

Query: 97  AVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTA 156
           AV NFK       D A    FL +HSK EIVDMLRKHTY DEL+Q+ +     +      
Sbjct: 114 AVVNFK-NVLEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGK 173

Query: 157 AAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-GEGMGSAKGVL 216
              + + QN      REVLFEK VTPSDVGKLNRLVIPKQHAEK+FPL        KGVL
Sbjct: 174 RNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVL 233

Query: 217 LNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYID 276
           +NFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RSTG +++LYID
Sbjct: 234 INFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYID 293

Query: 277 GRAGG---VKPVQ-VVKLFGVNILEVP-------VGWCG---KRDREGLSELERTKKQRI 326
            +        PVQ VV+LFGV+I  V        V  CG    RD + +  L  +KKQ I
Sbjct: 294 WKVRSGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAI 352

[Close]

BLAST of CmoCh04G021020 vs. TAIR 10
Match: AT1G68840.2 (related to ABI3/VP1 2 )

HSP 1 Score: 333.6 bits (854), Expect = 1.8e-91
Identity = 186/304 (61.18%), Postives = 213/304 (70.07%), Query Frame = 0


Query: 37  DAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRD 96
           + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN + +AA++YDIAA RFRGRD
Sbjct: 54  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRD 113

Query: 97  AVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTA 156
           AV NFK       D A    FL +HSK EIVDMLRKHTY DEL+Q+ +     +      
Sbjct: 114 AVVNFK-NVLEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGK 173

Query: 157 AAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-GEGMGSAKGVL 216
              + + QN      REVLFEK VTPSDVGKLNRLVIPKQHAEK+FPL        KGVL
Sbjct: 174 RNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVL 233

Query: 217 LNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYID 276
           +NFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RSTG +++LYID
Sbjct: 234 INFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYID 293

Query: 277 GRAGG---VKPVQ-VVKLFGVNILEVP-------VGWCG---KRDREGLSELERTKKQRI 326
            +        PVQ VV+LFGV+I  V        V  CG    RD + +  L  +KKQ I
Sbjct: 294 WKVRSGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAI 352

[Close]

BLAST of CmoCh04G021020 vs. TAIR 10
Match: AT3G25730.1 (ethylene response DNA binding factor 3 )

HSP 1 Score: 328.9 bits (842), Expect = 4.5e-90
Identity = 191/341 (56.01%), Postives = 229/341 (67.16%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDST-----SVSPV---------TPLLFHSSSSPGVPHDAESRKLPSS 60
           MD  SS+D+S+ +  +     S SP          T ++  S +   V  +AESRKLPSS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAF 120
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+AA RFRGRDAVTNFK   F
Sbjct: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTF 120

Query: 121 SSVDAAFEADFLNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNA 180
                  E +FLN+HSK EIVDMLRKHTY +EL Q KR   G    TT  A A+  +   
Sbjct: 121 EE-----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTG 180

Query: 181 ASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNF--PLGEGMGSAKGVLLNFEDMGGK 240
              +  E+LFEKTVTPSDVGKLNRLVIPK  AEK+F  PLG    S KG+LLNFED+ GK
Sbjct: 181 FKTA--ELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGK 240

Query: 241 LWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGG---V 300
           +WRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++ F RS   D+K +I  ++     +
Sbjct: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDL 300

Query: 301 KPVQVVKLFGVNILEVPVGWCGKRDREGLSELERTKKQRII 323
           +  +V++LFGV+I  +      K   E L    R KKQR++
Sbjct: 301 ETGRVMRLFGVDI-SLNAVVVVKETTEVLMSSLRCKKQRVL 333

The following BLAST results are available for this feature:

BLAST of CmoCh04G021020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C6M5	3.0e-91	62.58	AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis tha...	[more]
Q9ZWM9	6.7e-91	58.09	AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thalia...	[more]
P82280	2.6e-90	61.18	AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis tha...	[more]
Q9LS06	6.3e-89	56.01	AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thali...	[more]
Q8RZX9	1.3e-86	62.77	AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. jap...	[more]

BLAST of CmoCh04G021020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EPB7	1.3e-182	100.00	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita mos...	[more]
A0A6J1IBU1	5.0e-174	95.73	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita max...	[more]
A0A6J1IG08	1.1e-131	76.22	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita max...	[more]
A0A6J1E5P2	1.8e-131	76.22	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita mos...	[more]
A0A5D3BWI9	6.7e-126	75.00	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo ...	[more]

BLAST of CmoCh04G021020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930067.1	2.7e-182	100.00	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita mosch...	[more]
KAG6601748.1	2.2e-176	97.26	AP2/ERF and B3 domain-containing transcription factor ARF14, partial [Cucurbita ...	[more]
KAG7032471.1	2.9e-176	97.26	AP2/ERF and B3 domain-containing transcription repressor TEM1, partial [Cucurbit...	[more]
XP_023541268.1	9.4e-175	96.04	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita pepo ...	[more]
XP_022973620.1	1.0e-173	95.73	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita maxim...	[more]

BLAST of CmoCh04G021020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25560.1	2.1e-92	62.58	AP2/B3 transcription factor family protein	[more]
AT1G13260.1	4.8e-92	58.09	related to ABI3/VP1 1	[more]
AT1G68840.1	1.8e-91	61.18	related to ABI3/VP1 2	[more]
AT1G68840.2	1.8e-91	61.18	related to ABI3/VP1 2	[more]
AT3G25730.1	4.5e-90	56.01	ethylene response DNA binding factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 176..278 e-value: 1.2E-22 score: 91.2
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 176..273 e-value: 8.8E-27 score: 92.9
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 176..278 score: 13.662183
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 175..262 e-value: 1.9847E-26 score: 98.554
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 47..108 e-value: 1.4E-27 score: 107.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 46..94 e-value: 1.3E-7 score: 31.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 47..102 score: 19.941164
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 46..101 e-value: 1.09434E-24 score: 92.7198
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 164..282 e-value: 1.1E-43 score: 149.7
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 172..267
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 46..103 e-value: 2.8E-20 score: 74.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR31140:SF1	AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR TEM1	coord: 35..301
IPR044800	B3 domain-containing transcription factor LEC2-like	PANTHER	PTHR31140	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	coord: 35..301
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 46..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G021020.1	CmoCh04G021020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity