Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGATTGAAGATTATCTGTACCAGAAAAATATTCACGAACCCCTATTGGAGGTTAAGCTGGATACTATGACCACGGAACAATGGAAGCTCAAGGATCAACAGGTCTTAGGGTTGATCCTGGTGACGCTGTCCAGAAACGTGGCGTTCAACATTATCAAAGAGAAGACAACGTTAGGTATGTTGAAGGCGTTGTCGAATTTCTATGAAAAACCATCGACTATAAACAAGGTGTATTTGATGCAGAGATTGTTCAATCTACAAATGTCTGAAGGTGGATCTGTTGCTAATCATATAAATGAATTCAATATGATTGTAAGAAAACCGAGTTCGGTGGAAATTAATTTTGAAGATGAAATTAAAGCATTGATTTTGATGTCATCTTTACCCGAGTCATGGGATACTGTTATTGCCGCGACTAGTAGTTTCCAAGGATCTGAGAAACTCAAGTTCAATGAAATCCAAGATATAGTTATTAGTGAGAGTATTCCCAAACGAGAAATTGAGGATTCATCTGGTAGAGATCCTAGTGTTGACCAAAGGGGAAAAAGTAAATCGAAGGGTCCAAACAAATGCCGATCAAAATAAAAAAAAAACCGTAAAAATTTTCCAAATAGACCAAACATGACGTGTTGAAGTTGTGGAAAAAATGGTCACTTTCAGACAGATTGTACAAGACCAAAGAGGAAGCAAAATCACAAGTTAGAGGATGACGATGATTCTATAAATTCAGCAGAAGATATTGAGGATGCTCTAATCCTTAGTGTGGACAATCCGATTGAATCCTAGATTTTGGAATCAGGTGTATCTTTTCATTCGTCTCCAAATAAAGAGTTGTTTTAGAATTTCAAGTCTGAAAATTTCGAGATGACATACCTTGCCGACAACAAAATCTTGAATATTGAAGGAAAATGGTATGTCTATATAAAAACTCAGGTAGAAAATCAGTGAACATTAAAGGATGTCAGAAATATGTTCTTGGTCTCAAGAAGAACTAGATCTCTATTAGTCAGTTGGATAGCACATGTTGTGCAATAGAATTTGGGAAGAGTTCGTGGAAGATTGTGAAGGGTGCTATGGTGGTAGCACGTGGCACAAAATTTAGAACCCCATACACCACTTTAGGGTGTATGAACATGGCTGCTGTTGCTAAGAGTGATTCAAATTCAAGTTTATGGCACAATAGACTTGAACATACGAGCGTCAAAGGAATGAAGATGCTGGTTGTGGAAGTAGTTTTGGAAGGTTTGAAATCTATTGATATGAGTACTTGTGAGAACTGCGTTATGAGCAAACAGAAACTAGTTAGCTTCACAAAGGCTGCCAAATAATTAAAGAAAGTGCGGTTGGAAATGGTCAATACAGACGTTTGGGGACCATCTTCAATTCCATCACTTGGCGGATCAAAGTTCTACTTCACCTTTATCGATGATTTTAGTAGGAAGGTGTGGATTTATTTCTTGAAACACAAGTCAGATGTGTTTGCCACCTTCAAGAAGTGAAAAGCTGAAGTTCAAAATCAGACCGGCTTGAATATCAAATGCTTGAGGTCTGACAATGAAGGAGAGTATGACAAGTCAGAATTCAAAGCATTTTGTGAAGCTGAAGAAATTTGATTAATGAGGACAATTCTCGGTAAAGCAAGACAAAATGGATTTGCTGAAACGATGAATAAAACATTGAATGAGCGACAAAGAGTAAGAGGTTTCATTCTAGATTGCCAAAAATATTTTGGGTTGATGCTATAATACAGCAGTCTACTTGATCAATAGAGAGCCGTTAGTACCCTTGGAGTTCAAGTTGCCAGAAGAAACATGGACAAAAAAAGAACTCAAGTACTCTCACTTGAGAACTTTTGGTTGCACTGCGTATGTTCGTATTGATCCAGAGAAGAGTGACTAGCTTTACGCTGAGGCTGTGAAGCGCTATTTCATAGGCTATAGGTCTGACATGTCCGAGTACTTGTTTTGGGATGATAAGAACATAAAAGTCCTAAGACATTGTGACGTGACCTTTGATGAAAATTTCATGTACAAGAACAAAAAGAAGAAAGGAGAGAAGAAAGGTTCCAAGACAATGAAGCAATTGGGAGTTGAGGTTAAGTTGTTGAAAGATTCACCTAGTGATGTTGTAGCAAATACTCAAGAAACTCTTGAGACTATTGCTGAGGAACCAGAGGTGGAGTAA
mRNA sequence
ATGCAGATTGAAGATTATCTGTACCAGAAAAATATTCACGAACCCCTATTGGAGGTTAAGCTGGATACTATGACCACGGAACAATGGAAGCTCAAGGATCAACAGGTCTTAGGGTTGATCCTGGTGACGCTGTCCAGAAACGTGGCGTTCAACATTATCAAAGAGAAGACAACGTTAGGTATGTTGAAGGCGTTGTCGAATTTCTATGAAAAACCATCGACTATAAACAAGGTGTATTTGATGCAGAGATTGTTCAATCTACAAATGTCTGAAGGTGGATCTGTTGCTAATCATATAAATGAATTCAATATGATTGTAAGAAAACCGAGTTCGGTGGAAATTAATTTTGAAGATGAAATTAAAGCATTGATTTTGATGTCATCTTTACCCGAGTCATGGGATACTGTTATTGCCGCGACTAGTAGTTTCCAAGGATCTGAGAAACTCAAGTTCAATGAAATCCAAGATATAGTTATTAGTGAGAGTATTCCCAAACGAGAAATTGAGGATTCATCTGGTAGAGATCCTAGTGTTGACCAAAGGGGAAAAAAATTTGGGAAGAGTTCGTGGAAGATTGTGAAGGGTGCTATGGTGGTAGCACGTGGCACAAAATTTAGAACCCCATACACCACTTTAGGGTGTATGAACATGGCTGCTGTTGCTAAGAGTGATTCAAATTCAAGTTTATGGCACAATAGACTTGAACATACGAGCGTCAAAGGAATGAAGATGCTGGTTGTGGAAGTAGTTTTGGAAGGCTATAGGTCTGACATGTCCGAGTACTTGTTTTGGGATGATAAGAACATAAAAGTCCTAAGACATTGTGACGTGACCTTTGATGAAAATTTCATGTACAAGAACAAAAAGAAGAAAGGAGAGAAGAAAGGTTCCAAGACAATGAAGCAATTGGGAGTTGAGGTTAAGTTGTTGAAAGATTCACCTAGTGATGTTGTAGCAAATACTCAAGAAACTCTTGAGACTATTGCTGAGGAACCAGAGGTGGAGTAA
Coding sequence (CDS)
ATGCAGATTGAAGATTATCTGTACCAGAAAAATATTCACGAACCCCTATTGGAGGTTAAGCTGGATACTATGACCACGGAACAATGGAAGCTCAAGGATCAACAGGTCTTAGGGTTGATCCTGGTGACGCTGTCCAGAAACGTGGCGTTCAACATTATCAAAGAGAAGACAACGTTAGGTATGTTGAAGGCGTTGTCGAATTTCTATGAAAAACCATCGACTATAAACAAGGTGTATTTGATGCAGAGATTGTTCAATCTACAAATGTCTGAAGGTGGATCTGTTGCTAATCATATAAATGAATTCAATATGATTGTAAGAAAACCGAGTTCGGTGGAAATTAATTTTGAAGATGAAATTAAAGCATTGATTTTGATGTCATCTTTACCCGAGTCATGGGATACTGTTATTGCCGCGACTAGTAGTTTCCAAGGATCTGAGAAACTCAAGTTCAATGAAATCCAAGATATAGTTATTAGTGAGAGTATTCCCAAACGAGAAATTGAGGATTCATCTGGTAGAGATCCTAGTGTTGACCAAAGGGGAAAAAAATTTGGGAAGAGTTCGTGGAAGATTGTGAAGGGTGCTATGGTGGTAGCACGTGGCACAAAATTTAGAACCCCATACACCACTTTAGGGTGTATGAACATGGCTGCTGTTGCTAAGAGTGATTCAAATTCAAGTTTATGGCACAATAGACTTGAACATACGAGCGTCAAAGGAATGAAGATGCTGGTTGTGGAAGTAGTTTTGGAAGGCTATAGGTCTGACATGTCCGAGTACTTGTTTTGGGATGATAAGAACATAAAAGTCCTAAGACATTGTGACGTGACCTTTGATGAAAATTTCATGTACAAGAACAAAAAGAAGAAAGGAGAGAAGAAAGGTTCCAAGACAATGAAGCAATTGGGAGTTGAGGTTAAGTTGTTGAAAGATTCACCTAGTGATGTTGTAGCAAATACTCAAGAAACTCTTGAGACTATTGCTGAGGAACCAGAGGTGGAGTAA
Protein sequence
MQIEDYLYQKNIHEPLLEVKLDTMTTEQWKLKDQQVLGLILVTLSRNVAFNIIKEKTTLGMLKALSNFYEKPSTINKVYLMQRLFNLQMSEGGSVANHINEFNMIVRKPSSVEINFEDEIKALILMSSLPESWDTVIAATSSFQGSEKLKFNEIQDIVISESIPKREIEDSSGRDPSVDQRGKKFGKSSWKIVKGAMVVARGTKFRTPYTTLGCMNMAAVAKSDSNSSLWHNRLEHTSVKGMKMLVVEVVLEGYRSDMSEYLFWDDKNIKVLRHCDVTFDENFMYKNKKKKGEKKGSKTMKQLGVEVKLLKDSPSDVVANTQETLETIAEEPEVE
Homology
BLAST of CmoCh04G021010 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 92.4 bits (228), Expect = 1.0e-17
Identity = 59/192 (30.73%), Postives = 112/192 (58.33%), Query Frame = 0
Query: 2 QIEDYLYQKNIHEPLLEV---KLDTMTTEQWKLKDQQVLGLILVTLSRNVAFNIIKEKTT 61
++ D L Q+ +H+ +L+V K DTM E W D++ I + LS +V NII E T
Sbjct: 23 RMRDLLIQQGLHK-VLDVDSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTA 82
Query: 62 LGMLKALSNFYEKPSTINKVYLMQRLFNLQMSEGGSVANHINEFNMIVRKPSSVEINFED 121
G+ L + Y + NK+YL ++L+ L MSEG + +H+N FN ++ + +++ + E+
Sbjct: 83 RGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEE 142
Query: 122 EIKALILMSSLPESWDTVIAATSSFQGSEKLKFNEIQD-IVISESIPKREIEDSSGRDPS 181
E KA++L++SLP S+D + AT+ G ++ ++ ++++E + K+ ++ G+
Sbjct: 143 EDKAILLLNSLPSSYDNL--ATTILHGKTTIELKDVTSALLLNEKMRKK--PENQGQALI 202
Query: 182 VDQRGKKFGKSS 190
+ RG+ + +SS
Sbjct: 203 TEGRGRSYQRSS 209
BLAST of CmoCh04G021010 vs. ExPASy TrEMBL
Match:
A0A484NK44 (CCHC-type domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS42494 PE=4 SV=1)
HSP 1 Score: 280.8 bits (717), Expect = 7.5e-72
Identity = 190/462 (41.13%), Postives = 241/462 (52.16%), Query Frame = 0
Query: 1 MQIEDYLYQKNIHEPLLEVKLDTMTTEQWKLKDQQVLGLILVTLSRNVAFNIIKEKTTLG 60
MQIEDYLYQK++HEPL VK D+MT EQWKLKD+Q LG+I +TL++NVAFNI+KE TT G
Sbjct: 139 MQIEDYLYQKDLHEPLTGVKPDSMTEEQWKLKDRQALGMIRLTLTKNVAFNIVKENTTAG 198
Query: 61 MLKALSNFYEKPSTINKVYLMQRLFNLQMSEGGSVANHINEFNMIVRKPSSVEINFEDEI 120
++KALSN YEKPS +NKVYLM+RLFNLQM E GSVANHIN+FNMIV + SVEINFEDEI
Sbjct: 199 LMKALSNMYEKPSAMNKVYLMRRLFNLQMPESGSVANHINDFNMIVSQLCSVEINFEDEI 258
Query: 121 KALILMSSLP-------------------------------------------------- 180
KALIL+SS+P
Sbjct: 259 KALILLSSMPESWDTVNVAFNIVKENTTAGLMKALSNMYEKPSAMNKVYLMRRLFNLQMP 318
Query: 181 ----------------------------------------ESWDTVIAATSSFQGSEKLK 240
ESWDTV+AA SS +GSEKL+
Sbjct: 319 ESGSVANHINDFNMIVSQLCSVEINFEDEIKALILLSSMLESWDTVVAAISSSRGSEKLR 378
Query: 241 FNEIQDIVISESIPKREIEDSSGRDPSVDQRGKKFGKSSWKIVKGAMVVARGTKFRTPYT 300
F+EI+D+V+SESI KRE+ DSSG SVDQ+G+ K + + + R+ T
Sbjct: 379 FDEIRDVVLSESIRKREMGDSSGSALSVDQKGRSKFKGQHQHGRSKSKNRGKSPNRSNIT 438
Query: 301 TLGC----------------MNMAAVAKSDS------------------NSSLW---HNR 336
C N + DS N W H
Sbjct: 439 CWNCGDKGHFKADCKKPKKKQNQKSGDDGDSVNSAEDIGDALILSVAQLNPGFWILVHPS 498
BLAST of CmoCh04G021010 vs. ExPASy TrEMBL
Match:
A0A484K039 (Uncharacterized protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS897 PE=4 SV=1)
HSP 1 Score: 256.1 bits (653), Expect = 2.0e-64
Identity = 129/183 (70.49%), Postives = 158/183 (86.34%), Query Frame = 0
Query: 1 MQIEDYLYQKNIHEPLLEVKLDTMTTEQWKLKDQQVLGLILVTLSRNVAFNIIKEKTTLG 60
MQIEDYLYQK++ +PL EVK D+MT EQWK+KD+Q LG+I +TL++NVAFNI+KE TT G
Sbjct: 21 MQIEDYLYQKDLRKPLTEVKPDSMTEEQWKIKDRQALGMIRLTLTKNVAFNIVKENTTAG 80
Query: 61 MLKALSNFYEKPSTINKVYLMQRLFNLQMSEGGSVANHINEFNMIVRKPSSVEINFEDEI 120
++KALSN YEKPS +NKVYLM+RLFNLQM E GSVANHIN+FNMIV + VEINFEDEI
Sbjct: 81 LMKALSNLYEKPSAMNKVYLMRRLFNLQMPESGSVANHINDFNMIVSQLCYVEINFEDEI 140
Query: 121 KALILMSSLPESWDTVIAATSSFQGSEKLKFNEIQDIVISESIPKREIEDSSGRDPSVDQ 180
K LIL+SS+PESWD V+AA SS +GSEKL+F+EI+D+V+SESI KRE+ DSSG SVD+
Sbjct: 141 KVLILLSSMPESWDIVVAAISSSRGSEKLRFDEIRDVVLSESIRKREMVDSSGSALSVDR 200
Query: 181 RGK 184
RG+
Sbjct: 201 RGR 203
BLAST of CmoCh04G021010 vs. ExPASy TrEMBL
Match:
A0A6A2WDE1 (NAC domain-containing protein 48 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117016pilonHSYRG00601 PE=4 SV=1)
HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 141/320 (44.06%), Postives = 193/320 (60.31%), Query Frame = 0
Query: 1 MQIEDYLYQKNIHEPLLEVKLDTMTTEQWKLKDQQVLGLILVTLSRNVAFNIIKEKTTLG 60
MQIED++YQKN+++PLL + + + E W L D+Q LG+I +TLSRNVAFNI KEKTT G
Sbjct: 1 MQIEDFMYQKNLYQPLLGKQPEGLKNEDWALLDRQALGVIRLTLSRNVAFNIEKEKTTTG 60
Query: 61 MLKALSNFYEKPSTINKVYLMQRLFNLQMSEGGSVANHINEFNMIVRKPSSVEINFEDEI 120
++ ALS+ YEKP T NKV+LM+RLFNL+M+E SVA H+NE N I + SSVEI F+DE+
Sbjct: 61 LMAALSSMYEKPLTSNKVHLMRRLFNLRMAERASVAQHLNELNTITTQLSSVEIEFDDEV 120
Query: 121 KALILMSSLPESWDTVIAATSSFQGSEKLKFNEIQDIVISESIPKRE------------- 180
+ALIL+SSLP+SW+ + A S+ G+ KLKF+++ D+V+SE I +RE
Sbjct: 121 RALILLSSLPDSWNVTVTAISNSSGNSKLKFDDVIDLVLSEEIRRRESGAYFHSTPCQEI 180
Query: 181 IEDSSGRDPSVDQRGKKFGKSSWKIVKGAMVVARGTKFRTPYTTLGCMNMAAVAKSDSNS 240
+E+ + F WKI K +V+ARG K T Y T N+ A A +D S
Sbjct: 181 MENYVSGQLDGEGYSTTFSGYKWKITKRVLVIARGKKMGTLYVTSNLENIIATADADGKS 240
Query: 241 SLWHNRLEHTSVKGMKMLVVEVVLEGYRSDMSEYLFWDDKNIKVLRHCDVTFDENFMYKN 300
+LWH RL H S KGMK L +G SD L+ DV E++++
Sbjct: 241 NLWHQRLGHMSEKGMKTL----FSKGKLSD--------------LKTVDVGLYEDYIFGK 300
Query: 301 KKKKGEKKGSKTMKQLGVEV 308
+KK K KT K +E+
Sbjct: 301 QKKVSLAKIDKTPKAEKLEL 302
BLAST of CmoCh04G021010 vs. ExPASy TrEMBL
Match:
A0A2G2YBC9 (Intron_maturas2 domain-containing protein OS=Capsicum annuum OX=4072 GN=T459_31493 PE=4 SV=1)
HSP 1 Score: 226.5 bits (576), Expect = 1.7e-55
Identity = 121/165 (73.33%), Postives = 139/165 (84.24%), Query Frame = 0
Query: 1 MQIEDYLYQKNIHEPLLEVKLDTMTTEQWKLKDQQVLGLILVTLSRNVAFNIIKEKTTLG 60
MQIEDYLYQK +HEPL+ VKL M + WKLKD+Q LGLI +TLSRNVAFNI+KEKTT
Sbjct: 173 MQIEDYLYQKGLHEPLIGVKLQYMKEKDWKLKDRQALGLIRLTLSRNVAFNIVKEKTTSD 232
Query: 61 MLKALSNFYEKPSTINKVYLMQRLFNLQMSEGGSVANHINEFNMIVRKPSSVEINFEDEI 120
+LKALSN YEKPS NKVYLM+RLFNLQM E GSVA+HINEFN+IV + SV+INFEDEI
Sbjct: 233 LLKALSNMYEKPSARNKVYLMRRLFNLQMPENGSVADHINEFNIIVSQLCSVDINFEDEI 292
Query: 121 KALILMSSLPESWDTVIAATSSFQGSEKLKFNEIQDIVISESIPK 166
KALILMSSLPE T++AA SSF GSEKLKF++I+D+V SESI K
Sbjct: 293 KALILMSSLPEY--TIVAAISSFLGSEKLKFDKIRDVVRSESIRK 335
BLAST of CmoCh04G021010 vs. ExPASy TrEMBL
Match:
A0A6A3ATL2 (E3 ubiquitin-protein ligase SINAT3 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110357pilonHSYRG00005 PE=3 SV=1)
HSP 1 Score: 225.3 bits (573), Expect = 3.7e-55
Identity = 140/324 (43.21%), Postives = 193/324 (59.57%), Query Frame = 0
Query: 1 MQIEDYLYQKNIHEPLLEVKLDTMTTEQWKLKDQQVLGLILVTLSRNVAFNIIKEKTTLG 60
MQIED+LYQKN+++ LL + + M E W L D+Q LG+I +TL RNVAFNI KEKTT+G
Sbjct: 302 MQIEDFLYQKNLYQSLLGKQPEGMKDEDWALLDKQALGVIRLTLFRNVAFNIAKEKTTVG 361
Query: 61 MLKALSNFYEKPSTINKVYLMQRLFNLQMSEGGSVANHINEFNMIVRKPSSVEINFEDEI 120
++ LS+ YEK S NKV+LM+RLFNL+M+E SVA H+NE N I + SSV+I F+DE+
Sbjct: 362 LIATLSSMYEKSSASNKVHLMRRLFNLRMAEASSVAQHLNELNTITTQLSSVKIEFDDEV 421
Query: 121 KALILMSSLPESWDTVIAATSSFQGSEKLKFNEIQDI----VISESIPKREIEDSSGRDP 180
+ALIL+SSLP+SW+ + A SS G+ KLKF+++QD+ VI E+ + +S
Sbjct: 422 RALILLSSLPDSWNATVTAVSSSSGNSKLKFDDVQDLDSAKVIEETGDAMILIVNSPTKL 481
Query: 181 SVDQRGKKFGKS-------------SWKIVKGAMVVARGTKFRTPYTTLGCMNMAAVAKS 240
+ G F + WKI KGA+V+ARG K T Y T N+ AVA +
Sbjct: 482 CILDLGASFHSTPCREIMENYVSGCEWKITKGALVIARGKKTDTLYITSNLENIIAVADA 541
Query: 241 DSNSSLWHNRLEHTSVKGMKMLVVEVVLEGYRSDMSEYLFWDDKNIKVLRHCDVTFDENF 300
D S++WH RL H S KGMK L + +G SD L++ DV E+
Sbjct: 542 DGKSNIWHQRLGHMSEKGMKTL----LSKGKLSD--------------LKNVDVGLCEDC 601
Query: 301 MYKNKKKKGEKKGSKTMKQLGVEV 308
++ +KK K KT K +E+
Sbjct: 602 IFGKQKKVSFAKIGKTPKTEKLEL 607
BLAST of CmoCh04G021010 vs. NCBI nr
Match:
KAG7011443.1 (hypothetical protein SDJN02_26349, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 360.1 bits (923), Expect = 2.0e-95
Identity = 229/480 (47.71%), Postives = 270/480 (56.25%), Query Frame = 0
Query: 1 MQIEDYLYQKNIHEPLLEVKLDTMTTEQWKLKDQQVLGLILVTLSRNVAFNIIKEKTTLG 60
MQIEDYLY+K++HEPL VKLDTMTTEQWKLKD+Q L LI +TLSRN AFNIIKEKTT
Sbjct: 286 MQIEDYLYKKDLHEPLWGVKLDTMTTEQWKLKDRQALWLIRLTLSRNAAFNIIKEKTTSD 345
Query: 61 MLKALSNFYEKPSTINKVYLMQRLFNLQMSEGGSVANHINEFNMIVRKPSSVEINFEDEI 120
+LKALSN YEK S +NKVYLM+RLFNLQMSEGGS+A++INEFNMIV + S VEINF+DEI
Sbjct: 346 LLKALSNMYEKLSAMNKVYLMRRLFNLQMSEGGSIADYINEFNMIVSRLSLVEINFKDEI 405
Query: 121 KALILMSSLPESWDTVIAATSSFQGSEKLKFNEIQDIVISESIPKREIEDSSGRDPSVD- 180
KALILMSSLPESWDTV+AA +S +GS+KLKF+EI+D+V+ ESI R+ DSSG+ S D
Sbjct: 406 KALILMSSLPESWDTVVAAINSSRGSDKLKFDEIRDLVLGESIRTRKTGDSSGKALSTDC 465
Query: 181 ------------------------------------------QRG--KKFGKSSWKIVKG 240
Q+G +FGKSSWKIVKG
Sbjct: 466 TKLKKKQNHKSEDDDDSIYTTEDTEDALILSVDSPAESGFWIQQGYAAEFGKSSWKIVKG 525
Query: 241 AMVVARGTKFRTPYTTLGCMNMAAVAKSDSNSSLWHNRLEHTSVKGMKMLVVEVVLE--- 300
AMVVARGTK T YTT C+NM A S SNSSLWHNRL H SVKGMKML+ + LE
Sbjct: 526 AMVVARGTKSGTLYTTAECINMTATDGSTSNSSLWHNRLGHLSVKGMKMLIAKGALEGLK 585
Query: 301 ------------------------------------------------------------ 336
Sbjct: 586 SVDIDVWGPSPVSSLGGSRLYVTFINDFSRKANAVNTTYLINRGSSVPLKFKLPEEVWTG 645
BLAST of CmoCh04G021010 vs. NCBI nr
Match:
VFR00719.1 (unnamed protein product [Cuscuta campestris])
HSP 1 Score: 280.8 bits (717), Expect = 1.5e-71
Identity = 190/462 (41.13%), Postives = 241/462 (52.16%), Query Frame = 0
Query: 1 MQIEDYLYQKNIHEPLLEVKLDTMTTEQWKLKDQQVLGLILVTLSRNVAFNIIKEKTTLG 60
MQIEDYLYQK++HEPL VK D+MT EQWKLKD+Q LG+I +TL++NVAFNI+KE TT G
Sbjct: 139 MQIEDYLYQKDLHEPLTGVKPDSMTEEQWKLKDRQALGMIRLTLTKNVAFNIVKENTTAG 198
Query: 61 MLKALSNFYEKPSTINKVYLMQRLFNLQMSEGGSVANHINEFNMIVRKPSSVEINFEDEI 120
++KALSN YEKPS +NKVYLM+RLFNLQM E GSVANHIN+FNMIV + SVEINFEDEI
Sbjct: 199 LMKALSNMYEKPSAMNKVYLMRRLFNLQMPESGSVANHINDFNMIVSQLCSVEINFEDEI 258
Query: 121 KALILMSSLP-------------------------------------------------- 180
KALIL+SS+P
Sbjct: 259 KALILLSSMPESWDTVNVAFNIVKENTTAGLMKALSNMYEKPSAMNKVYLMRRLFNLQMP 318
Query: 181 ----------------------------------------ESWDTVIAATSSFQGSEKLK 240
ESWDTV+AA SS +GSEKL+
Sbjct: 319 ESGSVANHINDFNMIVSQLCSVEINFEDEIKALILLSSMLESWDTVVAAISSSRGSEKLR 378
Query: 241 FNEIQDIVISESIPKREIEDSSGRDPSVDQRGKKFGKSSWKIVKGAMVVARGTKFRTPYT 300
F+EI+D+V+SESI KRE+ DSSG SVDQ+G+ K + + + R+ T
Sbjct: 379 FDEIRDVVLSESIRKREMGDSSGSALSVDQKGRSKFKGQHQHGRSKSKNRGKSPNRSNIT 438
Query: 301 TLGC----------------MNMAAVAKSDS------------------NSSLW---HNR 336
C N + DS N W H
Sbjct: 439 CWNCGDKGHFKADCKKPKKKQNQKSGDDGDSVNSAEDIGDALILSVAQLNPGFWILVHPS 498
BLAST of CmoCh04G021010 vs. NCBI nr
Match:
VFQ59121.1 (unnamed protein product [Cuscuta campestris])
HSP 1 Score: 256.1 bits (653), Expect = 4.1e-64
Identity = 129/183 (70.49%), Postives = 158/183 (86.34%), Query Frame = 0
Query: 1 MQIEDYLYQKNIHEPLLEVKLDTMTTEQWKLKDQQVLGLILVTLSRNVAFNIIKEKTTLG 60
MQIEDYLYQK++ +PL EVK D+MT EQWK+KD+Q LG+I +TL++NVAFNI+KE TT G
Sbjct: 21 MQIEDYLYQKDLRKPLTEVKPDSMTEEQWKIKDRQALGMIRLTLTKNVAFNIVKENTTAG 80
Query: 61 MLKALSNFYEKPSTINKVYLMQRLFNLQMSEGGSVANHINEFNMIVRKPSSVEINFEDEI 120
++KALSN YEKPS +NKVYLM+RLFNLQM E GSVANHIN+FNMIV + VEINFEDEI
Sbjct: 81 LMKALSNLYEKPSAMNKVYLMRRLFNLQMPESGSVANHINDFNMIVSQLCYVEINFEDEI 140
Query: 121 KALILMSSLPESWDTVIAATSSFQGSEKLKFNEIQDIVISESIPKREIEDSSGRDPSVDQ 180
K LIL+SS+PESWD V+AA SS +GSEKL+F+EI+D+V+SESI KRE+ DSSG SVD+
Sbjct: 141 KVLILLSSMPESWDIVVAAISSSRGSEKLRFDEIRDVVLSESIRKREMVDSSGSALSVDR 200
Query: 181 RGK 184
RG+
Sbjct: 201 RGR 203
BLAST of CmoCh04G021010 vs. NCBI nr
Match:
KAF3643966.1 (Pleiotropic drug resistance protein 1 [Capsicum annuum])
HSP 1 Score: 240.0 bits (611), Expect = 3.0e-59
Identity = 165/409 (40.34%), Postives = 196/409 (47.92%), Query Frame = 0
Query: 9 QKNIHEPLLEVKLDTMTTEQWKLKDQQVLGLILVTLSRNVAFNIIKEKTTLGMLKALSNF 68
+K +HEPL+ VKL+ M + WKLKD+Q LGLI +TLSRNVAFNI+KEKTT +LKALSN
Sbjct: 1390 KKGLHEPLIGVKLEYMKEKDWKLKDRQTLGLIRLTLSRNVAFNIVKEKTTSDLLKALSNM 1449
Query: 69 YEKPSTINKVYLMQRLFNLQMSEGGSVANHINEFNMIVRKPSSVEINFEDEIKALILMSS 128
YEKPS NKVYLM+RLFNLQM E GSVA+HINEFNMIV + SV+INFEDEIKALILMSS
Sbjct: 1450 YEKPSARNKVYLMRRLFNLQMPENGSVADHINEFNMIVSQLCSVDINFEDEIKALILMSS 1509
Query: 129 LPESWDTVIAATSSFQGSEKLKFNEIQDIVISESIPKREIEDSSGRDPSVDQRGK----- 188
LPE T++ A SS GSEKLKF++I+D+V S+SI KREI +SSG SVD+RG+
Sbjct: 1510 LPEY--TIVVAISSSLGSEKLKFDKIRDVVRSKSIRKREIGESSGSALSVDRRGRDQSRG 1569
Query: 189 ------------------------------------------------------------ 248
Sbjct: 1570 RNTHDRSKSKNRGKSPQKSNVTCWNCGEKGHFWTECKKPKKMKNQKSGDDNDSVNSTEDI 1629
Query: 249 ------------------------------------------------------------ 256
Sbjct: 1630 GNALILSVDSPVESCILDFGASFHLFPSKELFQNFKFGNFKKVYLVDNKPLVIERKGDVC 1689
BLAST of CmoCh04G021010 vs. NCBI nr
Match:
KAE8655918.1 (NAC domain-containing protein 48 [Hibiscus syriacus])
HSP 1 Score: 236.5 bits (602), Expect = 3.3e-58
Identity = 141/320 (44.06%), Postives = 193/320 (60.31%), Query Frame = 0
Query: 1 MQIEDYLYQKNIHEPLLEVKLDTMTTEQWKLKDQQVLGLILVTLSRNVAFNIIKEKTTLG 60
MQIED++YQKN+++PLL + + + E W L D+Q LG+I +TLSRNVAFNI KEKTT G
Sbjct: 1 MQIEDFMYQKNLYQPLLGKQPEGLKNEDWALLDRQALGVIRLTLSRNVAFNIEKEKTTTG 60
Query: 61 MLKALSNFYEKPSTINKVYLMQRLFNLQMSEGGSVANHINEFNMIVRKPSSVEINFEDEI 120
++ ALS+ YEKP T NKV+LM+RLFNL+M+E SVA H+NE N I + SSVEI F+DE+
Sbjct: 61 LMAALSSMYEKPLTSNKVHLMRRLFNLRMAERASVAQHLNELNTITTQLSSVEIEFDDEV 120
Query: 121 KALILMSSLPESWDTVIAATSSFQGSEKLKFNEIQDIVISESIPKRE------------- 180
+ALIL+SSLP+SW+ + A S+ G+ KLKF+++ D+V+SE I +RE
Sbjct: 121 RALILLSSLPDSWNVTVTAISNSSGNSKLKFDDVIDLVLSEEIRRRESGAYFHSTPCQEI 180
Query: 181 IEDSSGRDPSVDQRGKKFGKSSWKIVKGAMVVARGTKFRTPYTTLGCMNMAAVAKSDSNS 240
+E+ + F WKI K +V+ARG K T Y T N+ A A +D S
Sbjct: 181 MENYVSGQLDGEGYSTTFSGYKWKITKRVLVIARGKKMGTLYVTSNLENIIATADADGKS 240
Query: 241 SLWHNRLEHTSVKGMKMLVVEVVLEGYRSDMSEYLFWDDKNIKVLRHCDVTFDENFMYKN 300
+LWH RL H S KGMK L +G SD L+ DV E++++
Sbjct: 241 NLWHQRLGHMSEKGMKTL----FSKGKLSD--------------LKTVDVGLYEDYIFGK 300
Query: 301 KKKKGEKKGSKTMKQLGVEV 308
+KK K KT K +E+
Sbjct: 301 QKKVSLAKIDKTPKAEKLEL 302
BLAST of CmoCh04G021010 vs. TAIR 10
Match:
AT3G29785.1 (unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 78.2 bits (191), Expect = 1.4e-14
Identity = 38/88 (43.18%), Postives = 63/88 (71.59%), Query Frame = 0
Query: 1 MQIEDYLYQKNIHEPLLEVKLDTMTTEQWKLKDQQVLGLILVTLSRNVAFNIIKEKTTLG 60
M+IEDYLY K +H+PL + K++TM+ + W + +QVL +I +T+S+N+A N+ KEK+ G
Sbjct: 19 MKIEDYLYGKKLHQPLGK-KVETMSQDDWNILYRQVLDVIRLTISKNIAHNVAKEKSPDG 78
Query: 61 MLKALSNFYEKPSTINKVYLMQRLFNLQ 89
++K LS+ Y+KPST N V + +++
Sbjct: 79 LMKVLSDIYKKPSTNNTVISHEETISIE 105
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P10978 | 1.0e-17 | 30.73 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Match Name | E-value | Identity | Description | |
A0A484NK44 | 7.5e-72 | 41.13 | CCHC-type domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCU... | [more] |
A0A484K039 | 2.0e-64 | 70.49 | Uncharacterized protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS897 PE=4 SV... | [more] |
A0A6A2WDE1 | 1.6e-58 | 44.06 | NAC domain-containing protein 48 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0011... | [more] |
A0A2G2YBC9 | 1.7e-55 | 73.33 | Intron_maturas2 domain-containing protein OS=Capsicum annuum OX=4072 GN=T459_314... | [more] |
A0A6A3ATL2 | 3.7e-55 | 43.21 | E3 ubiquitin-protein ligase SINAT3 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00... | [more] |
Match Name | E-value | Identity | Description | |
KAG7011443.1 | 2.0e-95 | 47.71 | hypothetical protein SDJN02_26349, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
VFR00719.1 | 1.5e-71 | 41.13 | unnamed protein product [Cuscuta campestris] | [more] |
VFQ59121.1 | 4.1e-64 | 70.49 | unnamed protein product [Cuscuta campestris] | [more] |
KAF3643966.1 | 3.0e-59 | 40.34 | Pleiotropic drug resistance protein 1 [Capsicum annuum] | [more] |
KAE8655918.1 | 3.3e-58 | 44.06 | NAC domain-containing protein 48 [Hibiscus syriacus] | [more] |
Match Name | E-value | Identity | Description | |
AT3G29785.1 | 1.4e-14 | 43.18 | unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bact... | [more] |