CmoCh04G019880 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G019880
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Description40S ribosomal protein S9-2-like
LocationCmo_Chr04: 10296137 .. 10297729 (-)
RNA-Seq ExpressionCmoCh04G019880
SyntenyCmoCh04G019880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGGGAGAGAGAGAGAGAGAGAGAGATTAAACCCTAGCTCCTCCCTCTTCAACCTCCACCATTCCGCTTGGTTGAAGCCCTAGCAGAGAGCATACCATGGTCCACGTCTCTTTCTACAGGAACTGTGAGTATGCTCAACTTACCATCTATTATTTCCTTTCAATTTCTTCTCTTAATTGCTTCATTTCAATCTGGGAACCTACGGTTTCATCACATTAAATTGCACAATCTCAGATTTTCTAGGGTTAGATTCTTGTAGCTCAATACATTTTTACGACTGTTTTAAGCGGGAACTGGATGCCATTGTAAGTTTCACTTTCTGGACTCGACCTTCTAGGGTGTTATAAAATCAACGACGATATTGGGTGTAAATGATACAGAAAATGTTTGAAAAACAATAATGCTTGGGTGATGTTTGCTTCTTCATGCTTTTATATAGACCCAGGATCATTGAATTGTGGATTTATCATTATGTAGATGGGAAGACCTTCAAAAAACCTCGGCGCCCTTATGAGAAGGAGCGTCTGGATGCAGAGCTCAAACTTGTAGGTGAATATGGGCTTCGTTGTAAAAGAGAGCTATGGCGTGTTCAATATGCATTGAGCCGAATCCGAAATAATGCCAGGATGCTTTTGACGCTTGATGAAAAGAATCCACGAAGAATTTTTGAGGGAGAGGCCCTGCTTAGGAGGATGAACAGGTATGGTCTTTTGGATGAAAGTCAAAACAAGCTCGATTATGTCTTGGCACTTACTGTTGAGAATTTCCTTGAGCGTCGTCTCCAAACCCTTGTGTTCAAGTCTGGAATGGCAAAATCTATCCACCACGCTAGAGTGCTCATCAGGCAGAAGCATATAAGGTAGGGTGCCTCACTATCCATCTTTTTCCCAGAATGAAATAGAGTTCATCGTTCTAGTTCATGATGATGCTCAATACATAGCACATTTTTCTTCTTTGCCTTGATAGGGTAGGGAGGCAGGTAGTTAACATCCCCTCTTTCATGGTGAGGGTTGATTCCCAAAAGCACATAGATTTCTCTCTCACAAGTCCATTTGGAGGCGGACGTCCTGGAAGGGTGAAGAGAAAGAACCAGAAGGCGGCTGCGAAAAAGGCTGCTGGCGGAGATGGAGATGAAGAAGAAGAGGATTGAGCTGTGGGCTTAGTTAAAAGTAGTGTTTTACCTCAATTTTGTGTTGTCTGTGTTTTATTACGTCTTTTGAGCTTGTGTTTGGACTTCTACTTTGAGCTGTGACCGCCTTTTGAATCTACCCTGTATTTGTTATTGGCTCAATTGAAGGTCTCACCTGCCCTGGTTCTGTGTTCGAGTCATAGAAAATCTCGTGGGATGTAGGAGAACTCTTAAGTTGTTGGACTACATTGAGAAGACATGCAAGTTACGGTTCCTACAAAAGTAGAGTTTTTGCTTTCCTATTACTTATTTTCTTTTAATATTTTGGTTTCAACTAAGTCAATAAACATTACTGTTTGTCCTAAGCTTCCTAAGCTGTTCTCAGTGCTTATATTACGAAGATAAAGAGTTCTTCATTCCCTTTAATTCCTACTTCTCGCACTCCCTTTGTAGAGTTTTCCGA

mRNA sequence

AAGGGGAGAGAGAGAGAGAGAGAGAGATTAAACCCTAGCTCCTCCCTCTTCAACCTCCACCATTCCGCTTGGTTGAAGCCCTAGCAGAGAGCATACCATGGTCCACGTCTCTTTCTACAGGAACTATGGGAAGACCTTCAAAAAACCTCGGCGCCCTTATGAGAAGGAGCGTCTGGATGCAGAGCTCAAACTTGTAGGTGAATATGGGCTTCGTTGTAAAAGAGAGCTATGGCGTGTTCAATATGCATTGAGCCGAATCCGAAATAATGCCAGGATGCTTTTGACGCTTGATGAAAAGAATCCACGAAGAATTTTTGAGGGAGAGGCCCTGCTTAGGAGGATGAACAGGTATGGTCTTTTGGATGAAAGTCAAAACAAGCTCGATTATGTCTTGGCACTTACTGTTGAGAATTTCCTTGAGCGTCGTCTCCAAACCCTTGTGTTCAAGTCTGGAATGGCAAAATCTATCCACCACGCTAGAGTGCTCATCAGGCAGAAGCATATAAGGGTAGGGAGGCAGGTAGTTAACATCCCCTCTTTCATGGTGAGGGTTGATTCCCAAAAGCACATAGATTTCTCTCTCACAAGTCCATTTGGAGGCGGACGTCCTGGAAGGGTGAAGAGAAAGAACCAGAAGGCGGCTGCGAAAAAGGCTGCTGGCGGAGATGGAGATGAAGAAGAAGAGGATTGAGCTGTGGGCTTAGTTAAAAGTAGTGTTTTACCTCAATTTTGTGTTGTCTGTGTTTTATTACGTCTTTTGAGCTTGTGTTTGGACTTCTACTTTGAGCTGTGACCGCCTTTTGAATCTACCCTGTATTTGTTATTGGCTCAATTGAAGGTCTCACCTGCCCTGGTTCTGTGTTCGAGTCATAGAAAATCTCGTGGGATGTAGGAGAACTCTTAAGTTGTTGGACTACATTGAGAAGACATGCAAGTTACGGTTCCTACAAAAGTAGAGTTTTTGCTTTCCTATTACTTATTTTCTTTTAATATTTTGGTTTCAACTAAGTCAATAAACATTACTGTTTGTCCTAAGCTTCCTAAGCTGTTCTCAGTGCTTATATTACGAAGATAAAGAGTTCTTCATTCCCTTTAATTCCTACTTCTCGCACTCCCTTTGTAGAGTTTTCCGA

Coding sequence (CDS)

ATGGTCCACGTCTCTTTCTACAGGAACTATGGGAAGACCTTCAAAAAACCTCGGCGCCCTTATGAGAAGGAGCGTCTGGATGCAGAGCTCAAACTTGTAGGTGAATATGGGCTTCGTTGTAAAAGAGAGCTATGGCGTGTTCAATATGCATTGAGCCGAATCCGAAATAATGCCAGGATGCTTTTGACGCTTGATGAAAAGAATCCACGAAGAATTTTTGAGGGAGAGGCCCTGCTTAGGAGGATGAACAGGTATGGTCTTTTGGATGAAAGTCAAAACAAGCTCGATTATGTCTTGGCACTTACTGTTGAGAATTTCCTTGAGCGTCGTCTCCAAACCCTTGTGTTCAAGTCTGGAATGGCAAAATCTATCCACCACGCTAGAGTGCTCATCAGGCAGAAGCATATAAGGGTAGGGAGGCAGGTAGTTAACATCCCCTCTTTCATGGTGAGGGTTGATTCCCAAAAGCACATAGATTTCTCTCTCACAAGTCCATTTGGAGGCGGACGTCCTGGAAGGGTGAAGAGAAAGAACCAGAAGGCGGCTGCGAAAAAGGCTGCTGGCGGAGATGGAGATGAAGAAGAAGAGGATTGA

Protein sequence

MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKAAAKKAAGGDGDEEEED
Homology
[Close]
BLAST of CmoCh04G019880 vs. ExPASy Swiss-Prot
Match: Q9FLF0 (40S ribosomal protein S9-2 OS=Arabidopsis thaliana OX=3702 GN=RPS9C PE=1 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 7.7e-98
Identity = 178/197 (90.36%), Postives = 192/197 (97.46%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MV+V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN AR 
Sbjct: 1   MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVKR+N++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

Query: 181 AAAKKAAGGDGDEEEED 198
           A AKKA+GGDGDE++E+
Sbjct: 181 AGAKKASGGDGDEDDEE 197

[Close]
BLAST of CmoCh04G019880 vs. ExPASy Swiss-Prot
Match: Q9LXG1 (40S ribosomal protein S9-1 OS=Arabidopsis thaliana OX=3702 GN=RPS9B PE=1 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 4.4e-93
Identity = 173/198 (87.37%), Postives = 190/198 (95.96%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHH+RVLIRQ+HIRVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVKR+N+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

Query: 181 AAAKKAAGG---DGDEEE 196
           +A+KKA+GG   DGD+EE
Sbjct: 181 SASKKASGGGDADGDDEE 198

[Close]
BLAST of CmoCh04G019880 vs. ExPASy Swiss-Prot
Match: P52810 (40S ribosomal protein S9 OS=Podospora anserina OX=2587412 GN=RPS9 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.7e-71
Identity = 138/190 (72.63%), Postives = 163/190 (85.79%), Query Frame = 0 

Query: 8   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEK 67
           R+Y KT K PRRP+E  RLD+ELKLVGEYGLR KRE+WRV   LS+IR  AR LLTLDEK
Sbjct: 4   RSYSKTAKVPRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARELLTLDEK 63

Query: 68  NPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHA 127
           +P+R+FEG AL+RR+ R G+LDES+ KLDYVLAL  E+FLERRLQTLV+K G+AKSIHHA
Sbjct: 64  DPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHA 123

Query: 128 RVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKAAAKKAA 187
           RVLIRQ+HIRVG+Q+VN+PSF+VR+DSQKHIDF+LTSPFGGGRPGRV+RK     AK A 
Sbjct: 124 RVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRKK----AKAAE 183

Query: 188 GGDGDEEEED 198
           GGDGD EE++
Sbjct: 184 GGDGDAEEDE 189

[Close]
BLAST of CmoCh04G019880 vs. ExPASy Swiss-Prot
Match: P55935 (40S ribosomal protein S9 OS=Drosophila melanogaster OX=7227 GN=RpS9 PE=1 SV=2)

HSP 1 Score: 260.8 bits (665), Expect = 1.3e-68
Identity = 135/188 (71.81%), Postives = 158/188 (84.04%), Query Frame = 0 

Query: 10  YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNP 69
           + KT+  PRRPYEK RLD ELK++GEYGLR KRE+WRV+YAL++IR  AR LLTLDEK+ 
Sbjct: 10  FSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDE 69

Query: 70  RRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARV 129
           +R+F+G ALLRR+ R G+LDES+ KLDYVL L +E+FLERRLQT VFK G+AKSIHHARV
Sbjct: 70  KRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARV 129

Query: 130 LIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKAAAKKAAGG 189
           LIRQ+HIRV +QVVNIPSF+VR+DSQKHIDFSL SPFGGGRPGRVKRKN K    +  GG
Sbjct: 130 LIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLK--KNQGGGG 189

Query: 190 DGDEEEED 198
              EEEED
Sbjct: 190 GAAEEEED 195

[Close]
BLAST of CmoCh04G019880 vs. ExPASy Swiss-Prot
Match: B4PEU8 (40S ribosomal protein S9 OS=Drosophila yakuba OX=7245 GN=RpS9 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.3e-68
Identity = 135/188 (71.81%), Postives = 158/188 (84.04%), Query Frame = 0 

Query: 10  YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNP 69
           + KT+  PRRPYEK RLD ELK++GEYGLR KRE+WRV+YAL++IR  AR LLTLDEK+ 
Sbjct: 10  FSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDE 69

Query: 70  RRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARV 129
           +R+F+G ALLRR+ R G+LDES+ KLDYVL L +E+FLERRLQT VFK G+AKSIHHARV
Sbjct: 70  KRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARV 129

Query: 130 LIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKAAAKKAAGG 189
           LIRQ+HIRV +QVVNIPSF+VR+DSQKHIDFSL SPFGGGRPGRVKRKN K    +  GG
Sbjct: 130 LIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLK--KNQGGGG 189

Query: 190 DGDEEEED 198
              EEEED
Sbjct: 190 GAAEEEED 195

[Close]
BLAST of CmoCh04G019880 vs. ExPASy TrEMBL
Match: A0A6J1KEY6 (40S ribosomal protein S9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111493255 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 9.7e-104
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEEED 198
           AAAKKAAGGDGDEEEED
Sbjct: 181 AAAKKAAGGDGDEEEED 197

[Close]
BLAST of CmoCh04G019880 vs. ExPASy TrEMBL
Match: A0A6J1GZA1 (40S ribosomal protein S9-2-like OS=Cucurbita moschata OX=3662 GN=LOC111458873 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 9.7e-104
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEEED 198
           AAAKKAAGGDGDEEEED
Sbjct: 181 AAAKKAAGGDGDEEEED 197

[Close]
BLAST of CmoCh04G019880 vs. ExPASy TrEMBL
Match: A0A6J1JAT4 (40S ribosomal protein S9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485110 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEEED 198
           AAAKKAAGGDGDEE+ED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh04G019880 vs. ExPASy TrEMBL
Match: A0A0A0KSN1 (S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604980 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEEED 198
           AAAKKAAGGDGDEE+ED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh04G019880 vs. ExPASy TrEMBL
Match: A0A1S3CA34 (40S ribosomal protein S9-2 OS=Cucumis melo OX=3656 GN=LOC103498678 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEEED 198
           AAAKKAAGGDGDEE+ED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh04G019880 vs. NCBI nr
Match: XP_022957492.1 (40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022998674.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_023515426.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >KAG6601653.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032414.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEEED 198
           AAAKKAAGGDGDEEEED
Sbjct: 181 AAAKKAAGGDGDEEEED 197

[Close]
BLAST of CmoCh04G019880 vs. NCBI nr
Match: XP_004135180.1 (40S ribosomal protein S9-2 [Cucumis sativus] >XP_004141548.1 40S ribosomal protein S9-2 [Cucumis sativus] >XP_008446334.1 PREDICTED: 40S ribosomal protein S9-2 [Cucumis melo] >XP_008459594.1 PREDICTED: 40S ribosomal protein S9-2 [Cucumis melo] >XP_022925366.1 40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022957390.1 40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022973538.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_022987602.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_023535520.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >XP_023552855.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >XP_038891088.1 40S ribosomal protein S9-2-like [Benincasa hispida] >KAA0034405.1 40S ribosomal protein S9-2-like [Cucumis melo var. makuwa] >KAG6592358.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAA0039283.1 40S ribosomal protein S9-2-like [Cucumis melo var. makuwa] >KAG6601424.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KGN51904.1 hypothetical protein Csa_008331 [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 4.5e-103
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEEED 198
           AAAKKAAGGDGDEE+ED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh04G019880 vs. NCBI nr
Match: XP_022944955.1 (40S ribosomal protein S9-2 [Cucurbita moschata] >XP_022968439.1 40S ribosomal protein S9-2 [Cucurbita maxima] >XP_022973398.1 40S ribosomal protein S9-2 [Cucurbita maxima] >XP_023525066.1 40S ribosomal protein S9-2 [Cucurbita pepo subsp. pepo] >XP_023541316.1 40S ribosomal protein S9-2 [Cucurbita pepo subsp. pepo] >KAG6574094.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013152.1 40S ribosomal protein S9-2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6607518.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 383.6 bits (984), Expect = 9.9e-103
Identity = 195/197 (98.98%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKR+NQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEEED 198
           AAAKKAAGGDGDEE+ED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh04G019880 vs. NCBI nr
Match: XP_022142910.1 (40S ribosomal protein S9-2 [Momordica charantia] >XP_022151237.1 40S ribosomal protein S9-2 [Momordica charantia] >XP_038893425.1 40S ribosomal protein S9-2 [Benincasa hispida])

HSP 1 Score: 383.6 bits (984), Expect = 9.9e-103
Identity = 195/197 (98.98%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEEED 198
           AAAKKAAGGDGDEE+ED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh04G019880 vs. NCBI nr
Match: XP_024018555.1 (40S ribosomal protein S9-2 [Morus notabilis] >PON71929.1 Ribosomal protein [Parasponia andersonii] >PON83707.1 Ribosomal protein [Trema orientale])

HSP 1 Score: 382.5 bits (981), Expect = 2.2e-102
Identity = 194/197 (98.48%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKR+NQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEEED 198
           AAAKKAAGGDGDEE+ED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of CmoCh04G019880 vs. TAIR 10
Match: AT5G39850.1 (Ribosomal protein S4 )

HSP 1 Score: 357.8 bits (917), Expect = 5.4e-99
Identity = 178/197 (90.36%), Postives = 192/197 (97.46%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MV+V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN AR 
Sbjct: 1   MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVKR+N++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

Query: 181 AAAKKAAGGDGDEEEED 198
           A AKKA+GGDGDE++E+
Sbjct: 181 AGAKKASGGDGDEDDEE 197

[Close]
BLAST of CmoCh04G019880 vs. TAIR 10
Match: AT5G15200.1 (Ribosomal protein S4 )

HSP 1 Score: 342.0 bits (876), Expect = 3.1e-94
Identity = 173/198 (87.37%), Postives = 190/198 (95.96%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHH+RVLIRQ+HIRVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVKR+N+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

Query: 181 AAAKKAAGG---DGDEEE 196
           +A+KKA+GG   DGD+EE
Sbjct: 181 SASKKASGGGDADGDDEE 198

[Close]
BLAST of CmoCh04G019880 vs. TAIR 10
Match: AT5G15200.2 (Ribosomal protein S4 )

HSP 1 Score: 249.2 bits (635), Expect = 2.7e-66
Identity = 125/137 (91.24%), Postives = 132/137 (96.35%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIR 138
           AKSIHH+RVLIRQ+HIR
Sbjct: 121 AKSIHHSRVLIRQRHIR 137

[Close]
BLAST of CmoCh04G019880 vs. TAIR 10
Match: AT5G15750.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein )

HSP 1 Score: 42.4 bits (98), Expect = 5.1e-04
Identity = 29/130 (22.31%), Postives = 61/130 (46.92%), Query Frame = 0 

Query: 21  YEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLR 80
           +++E    E ++   Y +  + +  +       ++    ++  +D  +P RI   + LL 
Sbjct: 20  WKREGNHRENEITYRYHMGSRDDYKKYSGLCRMVQKLTNIMKQMDPADPFRIQMTDMLLE 79

Query: 81  RMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQKHIRVGR 140
           ++   G++  ++  L     L+V +F  RRL T++     A+    A   I Q H+RVG 
Sbjct: 80  KLYNMGVI-PTRKSLTLTERLSVSSFCRRRLSTVLVHLKFAEHHKEAVTYIEQGHVRVGP 139

Query: 141 QVVNIPSFMV 151
           + +  P+F+V
Sbjct: 140 ETITDPAFLV 148

The following BLAST results are available for this feature:
BLAST of CmoCh04G019880 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FLF07.7e-9890.3640S ribosomal protein S9-2 OS=Arabidopsis thaliana OX=3702 GN=RPS9C PE=1 SV=1[more]
Q9LXG14.4e-9387.3740S ribosomal protein S9-1 OS=Arabidopsis thaliana OX=3702 GN=RPS9B PE=1 SV=1[more]
P528104.7e-7172.6340S ribosomal protein S9 OS=Podospora anserina OX=2587412 GN=RPS9 PE=3 SV=1[more]
P559351.3e-6871.8140S ribosomal protein S9 OS=Drosophila melanogaster OX=7227 GN=RpS9 PE=1 SV=2[more]
B4PEU81.3e-6871.8140S ribosomal protein S9 OS=Drosophila yakuba OX=7245 GN=RpS9 PE=2 SV=1[more]
BLAST of CmoCh04G019880 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KEY69.7e-104100.0040S ribosomal protein S9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111493255 PE=3... [more]
A0A6J1GZA19.7e-104100.0040S ribosomal protein S9-2-like OS=Cucurbita moschata OX=3662 GN=LOC111458873 PE... [more]
A0A6J1JAT42.2e-10399.4940S ribosomal protein S9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485110 PE=3... [more]
A0A0A0KSN12.2e-10399.49S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604... [more]
A0A1S3CA342.2e-10399.4940S ribosomal protein S9-2 OS=Cucumis melo OX=3656 GN=LOC103498678 PE=3 SV=1[more]
BLAST of CmoCh04G019880 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022957492.12.0e-103100.0040S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022998674.1 40S ribosom... [more]
XP_004135180.14.5e-10399.4940S ribosomal protein S9-2 [Cucumis sativus] >XP_004141548.1 40S ribosomal prote... [more]
XP_022944955.19.9e-10398.9840S ribosomal protein S9-2 [Cucurbita moschata] >XP_022968439.1 40S ribosomal pr... [more]
XP_022142910.19.9e-10398.9840S ribosomal protein S9-2 [Momordica charantia] >XP_022151237.1 40S ribosomal p... [more]
XP_024018555.12.2e-10298.4840S ribosomal protein S9-2 [Morus notabilis] >PON71929.1 Ribosomal protein [Para... [more]
BLAST of CmoCh04G019880 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G39850.15.4e-9990.36Ribosomal protein S4 [more]
AT5G15200.13.1e-9487.37Ribosomal protein S4 [more]
AT5G15200.22.7e-6691.24Ribosomal protein S4 [more]
AT5G15750.15.1e-0422.31Alpha-L RNA-binding motif/Ribosomal protein S4 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001912Ribosomal protein S4/S9, N-terminalSMARTSM01390Ribosomal_S4_2coord: 8..108
e-value: 6.8E-25
score: 98.7
IPR001912Ribosomal protein S4/S9, N-terminalPFAMPF00163Ribosomal_S4coord: 15..64
e-value: 1.9E-6
score: 28.7
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 109..180
e-value: 2.0E-5
score: 34.0
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 109..152
e-value: 3.4E-13
score: 49.1
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 109..153
e-value: 4.89878E-9
score: 49.1702
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 108..166
e-value: 2.0E-14
score: 55.6
IPR005710Ribosomal protein S4/S9, eukaryotic/archaealTIGRFAMTIGR01018TIGR01018coord: 11..166
e-value: 1.9E-64
score: 214.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..197
NoneNo IPR availablePANTHERPTHR11831:SF3440S RIBOSOMAL PROTEIN S9-2-LIKEcoord: 5..197
NoneNo IPR availablePROSITEPS50889S4coord: 109..180
score: 11.141525
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 12..159
IPR022801Ribosomal protein S4/S9PANTHERPTHR1183130S 40S RIBOSOMAL PROTEINcoord: 5..197
IPR018079Ribosomal protein S4, conserved sitePROSITEPS00632RIBOSOMAL_S4coord: 107..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G019880.1CmoCh04G019880.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045903 positive regulation of translational fidelity
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding