CmoCh04G017230 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G017230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	binding partner of ACD11 1-like
Location	Cmo_Chr04: 8731610 .. 8735339 (-)
RNA-Seq Expression	CmoCh04G017230
Synteny	CmoCh04G017230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCTCGAGTTTTTCTTCTGAGATTTCGTCCTCTGAAACTACTCCACTTGCTCGTCTCCTCTGCAAGTTTTGTATTTCGACGAAAGAATAGGCGAATCAAGTTTGCTGCGTGAATATGAGCCCTGGTGGTTATACGGTCGAAGTGACGGGCTTGTCTCCTAAAGCCGAAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTGTGGTCCAATCGAGCTCGTTGAGATTATTAGGTATTCATTTCTTCCGTATTCAGCATTCAATTTCATGTCCTCGAGTCCGTAATTTCAGTATATTTGCATCTTATTGGGTGAACGAGTCGTATTTAAAAGATGTCATAGATTTTTCTAAACGTGATTAGGTTTGTAGTGGCTGTTTAGTGGTGATCACCCTAAATTTATGGCCTTTTTGTTTGAGTTTATATATTTTTTTTGTCTTTTCTCTTTTTCGAAAGCGCTTGGTGTATGGATTTCTGGTTTATGAAAACAGATCTGGTGAAGATGCCTGCACTGCCTATGTGACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTACTGAGTGTGAGTATTTCAATTCCATTTATGCTTCTGGCCTACAATACAGTATTTCAGTCTCTTTTTCCATTACTTTTTATTTGGAGCTACAGGGTATGCTCCCACGCGCGCTGATGCCATATAGACACGTGATCTTTATATTTTTAAATTTTGTTTGTGATATTTATTTCTGACTTCTCATATTTTATAACGAGAATCTGAAGAATATGGTTTAATGCATCGTTAGAATTGTGAAATAGCAATACTTTGGTTCTGGGCTGCACCCATGTTTTTATAGTGAAAACTGCATTCTTTTGTTGTGAACCACATATTTAATTTACAATGCCAAAATGAATCGCTCTTTTAAAAAAACTCTGGAAACACGATAGTGCCTTAGTAGGCATTATTATGTGGTTAACTTGTGTAGATGTGGCTCATTTGGCAATTTTGTTGGATGGGATGCTTTTCAACGAACTAGAAAATGGTTGAACCATACAGGGAAAAATGCCTTTTAATAAAGAAGGGTCCATGATCGTTTCTAAGAAGAATGGCAGTGGCATTTTTCTTTTCTCAATTGAAAAAGCTGTTCAATTTTCTCTGGGTTCCTTGGAGGAAGGAACATTTCATCTGGTTTTGGTGAAGGATTTCTCTGTCTTTCCTCAATGAAGCAGCCGGTTTCCTTTGTAGTTGATTGAGTCCCTCTTTTACTGGATTCCTATTGATAGTGAAGGGCTCCTTCGTTTCCTTCAGTAGGGTCTTTTGTTAGAGAAGAAAACCTATTGAGTGTGCTTACAACAATATATTATTAGAATCAAAATAATTGAAAGAGAGAGAAACTTGAAGAAGCCATAATATAAATATGCCGTTGAAATGTTCTTAGAAGCATGATCATGGATATAACTAAGCATTCTATTGAAAAAAAAGTGGACCTGTTTATCATTGTACGGACATGGCTTTTAAATGTAAGGCACATGACAAATCTGAATCTTCTTATACAAAAAAGAATAATAATAATAATAAAAATGAAGACAAATCTGAACCATCGGCAAATGACAAATCTGGATATGTGATTAGACAAAATCGCATAATTGTTTTTGTTGCTGCTGCTGCTGAATCTGTGTTTATAGGCAATAACATCGTTGTTTTTGTTGTAGAATTTATGACTAGAGTGACAACAACATTGTAGCTGTTTTGTTGAGTACTCTGTGGTTGGAGATAATAACGTTGTTGTTGTTGTTGAATCCATAGTTATTAATAGTTATTGTTGAATAATCTGCTAGACACATTTATCTCTCCATCTTCTCTTTTGCTGCAAATTTGCGTTGTTTTTAGGTATGAATTATTAATGTAATCTGAACAACATCAGATGAACTGCTCTTGGATGCAATTTATAAAGGATTTTCTGTACGGATACTACATTTCAGTTTGTAAGCATCAAACGTTCTGGTTTGATTATTCTGTTTGTGGTTTGGGGTTTTCAATCAACGTTCATTTCTGGTCATGTGCTTAATGATGTTGAACATACCTTTATTCATCTGATCACTTCATGCCATTAGTTTTTCGCCAAGGAGACAATGGTCGCTACTTTTCATCCTTTGTCTTCCACCTGATAATAATGATCATGCTTCTAATAGTTCAATGTCTGGTTATTGCAGGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGATGAATTTGGTTTCTGGAGTAGGCCTTCCGGTTACCATGAAGAAGACAGTACTGCTGTAAGTGTCAAAAATAATGTTTATTAATATTTCCTACCTGTTGCAATTTGCAAATGTTTTCTTCCTGTTGACAATCTTTGATTAGTTGATGAGTTTTCCATCTTATAGTCGGCACAAAGAAGTCAGTTTATTTCCAGCGCTGGTAACGCAGTGACCATGGCCCAAGAAGTAGTCAAAACCATGCTGTCCATGGGTTACGTGCTGGGCAAAGATGCATTAACCAAAGCCAAAACCTTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCAGATTTGAGTCATAGAATTGGTCTTACTGACATGATAGGTGCGGGTTTTGAAGCAGTTAAAACCATGGATGATAAGTACCACGTATTGCAGACCACCAAATCAGCTATATCAGCCACAGGAAGAACAGCTGCTGCCGCTGCCGATACCGTGGTCCAAAGTGGCTACTTCTCTAGGGGAGCTCTTTTCGTGTCGGATGCCCTGAATCGAGCAGCCAAAGTTGCTGCTGACTTGGGTAGTCGTGGTGTTGAGCACTGATGGGTTAGAGAGTGCTACTCTTCCATTGTAAATAAATTATATAAAAAAAAAATGTTAAACACTTACTACCTTAAAATTTTGCAAGTTTATACCGGTATTTTATCAGAGCGTACATTCATCTGAAAGCTGTACGTATAAGTATAAACTCTACATTTCATAGAGTTCAATCACACTAGTCATTTGACCCCACAAGTTTGCTAAATTTTAACCCCAAATAAGGTAAAATCCAATCAGAGATGAACTATATTGAGTCGTTTGTCAGTTTGTAAATTCAGTATCCTTGGAGTCAAATCTGTTTTTTTAGCACTCTTGGAAACGTCTCCCAAATTGTACTTTTTACAATCCTGCTTCTTACAGATTGTCTTCTTCTCCGTAACCAATTTGTTAGTTGGGTTGCGCTCGAATTTGATAAACTTTATTTGGTTCATTTAGATTGTTGATTGTCTAACTGGGAGGCCATATGGATGTCTGCTTGATTCGGACGCAACAAGAATGAAGTCCCGCATGCAATTTCATGATGTTGCCGCCTTTGGATAGTTTCTTCCAGCTGTAATTGTCCGAGGCTTGCAACTCGCTCCATCTGGCAATAGCTCCCTGCAAGTTACAGGTCGGTATGCTCTTCAATTTTCTGCTGTGGACTGTGGATTGTGGTCTCATCAAGTAGACATCGAACATGCATTTGTATTATATGACTCTTGGCATTTAGGCAACACGAGGGACAAACTCGAATGTTATATCTAAGCTGTTAATTAATCGATCAAGTCTCGGCCATAACATTTGAATCATGCATTGCACAATATTCCCACACACCGTGGCTGTATTGTCGTGGTCGGAATCGATCACATCATCTGCTGCAAGTACATAAATAGTTTCAATAGAAATGATCATGG

mRNA sequence

TTTTCTCGAGTTTTTCTTCTGAGATTTCGTCCTCTGAAACTACTCCACTTGCTCGTCTCCTCTGCAAGTTTTGTATTTCGACGAAAGAATAGGCGAATCAAGTTTGCTGCGTGAATATGAGCCCTGGTGGTTATACGGTCGAAGTGACGGGCTTGTCTCCTAAAGCCGAAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTGTGGTCCAATCGAGCTCGTTGAGATTATTAGATCTGGTGAAGATGCCTGCACTGCCTATGTGACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTACTGAGTGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGATGAATTTGGTTTCTGGAGTAGGCCTTCCGGTTACCATGAAGAAGACAGTACTGCTTCGGCACAAAGAAGTCAGTTTATTTCCAGCGCTGGTAACGCAGTGACCATGGCCCAAGAAGTAGTCAAAACCATGCTGTCCATGGGTTACGTGCTGGGCAAAGATGCATTAACCAAAGCCAAAACCTTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCAGATTTGAGTCATAGAATTGGTCTTACTGACATGATAGGTGCGGGTTTTGAAGCAGTTAAAACCATGGATGATAAGTACCACGTATTGCAGACCACCAAATCAGCTATATCAGCCACAGGAAGAACAGCTGCTGCCGCTGCCGATACCGTGGTCCAAAGTGGCTACTTCTCTAGGGGAGCTCTTTTCGTGTCGGATGCCCTGAATCGAGCAGCCAAAGTTGCTGCTGACTTGGGTAGTCGTGGTGTTGAGCACTGATGGATTGTTGATTGTCTAACTGGGAGGCCATATGGATGTCTGCTTGATTCGGACGCAACAAGAATGAAGTCCCGCATGCAATTTCATGATGTTGCCGCCTTTGGATAGTTTCTTCCAGCTGTAATTGTCCGAGGCTTGCAACTCGCTCCATCTGGCAATAGCTCCCTGCAAGTTACAGGTCGGTATGCTCTTCAATTTTCTGCTGTGGACTGTGGATTGTGGTCTCATCAAGTAGACATCGAACATGCATTTGTATTATATGACTCTTGGCATTTAGGCAACACGAGGGACAAACTCGAATGTTATATCTAAGCTGTTAATTAATCGATCAAGTCTCGGCCATAACATTTGAATCATGCATTGCACAATATTCCCACACACCGTGGCTGTATTGTCGTGGTCGGAATCGATCACATCATCTGCTGCAAGTACATAAATAGTTTCAATAGAAATGATCATGG

Coding sequence (CDS)

ATGAGCCCTGGTGGTTATACGGTCGAAGTGACGGGCTTGTCTCCTAAAGCCGAAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTGTGGTCCAATCGAGCTCGTTGAGATTATTAGATCTGGTGAAGATGCCTGCACTGCCTATGTGACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTACTGAGTGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGATGAATTTGGTTTCTGGAGTAGGCCTTCCGGTTACCATGAAGAAGACAGTACTGCTTCGGCACAAAGAAGTCAGTTTATTTCCAGCGCTGGTAACGCAGTGACCATGGCCCAAGAAGTAGTCAAAACCATGCTGTCCATGGGTTACGTGCTGGGCAAAGATGCATTAACCAAAGCCAAAACCTTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCAGATTTGAGTCATAGAATTGGTCTTACTGACATGATAGGTGCGGGTTTTGAAGCAGTTAAAACCATGGATGATAAGTACCACGTATTGCAGACCACCAAATCAGCTATATCAGCCACAGGAAGAACAGCTGCTGCCGCTGCCGATACCGTGGTCCAAAGTGGCTACTTCTCTAGGGGAGCTCTTTTCGTGTCGGATGCCCTGAATCGAGCAGCCAAAGTTGCTGCTGACTTGGGTAGTCGTGGTGTTGAGCACTGA

Protein sequence

MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH

Homology

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BLAST of CmoCh04G017230 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.4e-32
Identity = 89/240 (37.08%), Postives = 137/240 (57.08%), Query Frame = 0


Query: 7   TVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGA 66
           +V+V  LS  A E D+ +FF+F G +E ++ I+S E   +AYVTFK+    ETA LLSGA
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESID-IQSNEH--SAYVTFKETQGAETAVLLSGA 66

Query: 67  TIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQEVVKTM 126
           +I DQ V I    ++       S P+  H E  ++ A+         + V  A++VV +M
Sbjct: 67  SIADQSVIIELAPNY-------SPPAAPHAETQSSGAE---------SVVQKAEDVVSSM 126

Query: 127 LSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGF----EAVKTMD 186
           L+ G++LGKDA+ KAK FDE H  ++TA A VA L  +IGL+  + AG     E +K +D
Sbjct: 127 LAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVD 186

Query: 187 DKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVE 243
             + V + TKS  +A  +T ++A   V+++ Y   G  + + A NR A+ A ++G +  E
Sbjct: 187 QNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKE 227

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BLAST of CmoCh04G017230 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-07
Identity = 69/261 (26.44%), Postives = 108/261 (41.38%), Query Frame = 0


Query: 8   VEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGAT 67
           V VT +SP+  EK + DFF+FCG +  +   +SGE   TA + F+   + +TA LL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTEKSGETQ-TAKIQFERPSATKTALLLQDAL 64

Query: 68  IVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQE------ 127
           +   ++ IT                    ED  A++   Q    AG      QE      
Sbjct: 65  LGQNKIQIT-------------------SEDGGAASTTDQ--GGAGGDQAARQEDKPRSA 124

Query: 128 VVKTMLSMGYVLGKDALTKAKTFDESHQVSA-------TAAAKVADLSHRIGLTDMIGAG 187
           ++  +LS GY L    L K+   D+S+ VS+       +A + V  ++ R  +T      
Sbjct: 125 IISELLSRGYHLSDVTLEKSIQLDQSYGVSSKFKGILESALSGVRSVNERYHVT------ 184

Query: 188 FEAVKTMDDKYHV---LQTTKSAIS-----ATGRTAAAAADTVVQSGY---------FSR 239
            E    +D+K+ +   L  T S +S     A    A  +A   VQ+ Y            
Sbjct: 185 -EKANEVDNKFAISDKLNRTSSLVSTYFHKALETAAGTSAGQKVQNAYEDGKNQLLGIHN 236

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BLAST of CmoCh04G017230 vs. ExPASy TrEMBL
Match: A0A6J1H035 (binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458806 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 8.8e-131
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60
           MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA
Sbjct: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120
           CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120

Query: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180
           EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT
Sbjct: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180

Query: 181 MDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 240
           MDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG
Sbjct: 181 MDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 240

Query: 241 VEH 244
           VEH
Sbjct: 241 VEH 243

[Close]

BLAST of CmoCh04G017230 vs. ExPASy TrEMBL
Match: A0A6J1JE77 (binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486072 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.6e-130
Identity = 242/243 (99.59%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60
           MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA
Sbjct: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120
           CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120

Query: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180
           EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT
Sbjct: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180

Query: 181 MDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 240
           MD+KYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG
Sbjct: 181 MDEKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 240

Query: 241 VEH 244
           VEH
Sbjct: 241 VEH 243

[Close]

BLAST of CmoCh04G017230 vs. ExPASy TrEMBL
Match: A0A0A0KSM6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604930 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.6e-116
Identity = 219/244 (89.75%), Postives = 232/244 (95.08%), Query Frame = 0


Query: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60
           M+PGGYTVEVTGLSP A EKDVLDFFAF G IELVEI+RSGEDACTAYVTFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST-ASAQRSQFISSAGNAVTMA 120
           CLLSGA IVDQRVCITRWGHFDDEFGFWSRP G+ EEDST ASAQRSQFISSAGNAVTMA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVK 180
           QEVVKTML+MGYVLGKD LTKAK FDESHQVSATAAAKVADLSHRIGLTDM+GAG+EAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVK 180

Query: 181 TMDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSR 240
           ++D+KYHVL+TTKSAISATGRTAAAAADTVV+S YFSRGALF+SDALNRAAK AADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GVEH 244
           G+EH
Sbjct: 241 GLEH 244

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BLAST of CmoCh04G017230 vs. ExPASy TrEMBL
Match: A0A5D3CVI0 (Binding partner of ACD11 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00120 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 6.1e-116
Identity = 218/244 (89.34%), Postives = 231/244 (94.67%), Query Frame = 0


Query: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60
           M+PGGYTVEVTGLSP A EKDVLDFFAF G IELVEI+RSG+DACTAYVTFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPIATEKDVLDFFAFSGAIELVEIVRSGDDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST-ASAQRSQFISSAGNAVTMA 120
           CLLSGA IVDQRVCITRWGHFDDEFGFWSRP G+ EEDST ASAQRSQFISSAGNAVTMA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTSASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVK 180
           QEVVKTML+MGYVLGKD  TKAK FDESHQVSATAAAKVADLSHRIGLTDM+GAGFEAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGFEAVK 180

Query: 181 TMDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSR 240
           ++D+KYHVL+TTKSAISATGRTAAAAADTVV+S YFSRGALF+SDALNRAAK AADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GVEH 244
           G+EH
Sbjct: 241 GLEH 244

[Close]

BLAST of CmoCh04G017230 vs. ExPASy TrEMBL
Match: A0A1S3BET5 (binding partner of ACD11 1 OS=Cucumis melo OX=3656 GN=LOC103489100 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 6.1e-116
Identity = 218/244 (89.34%), Postives = 231/244 (94.67%), Query Frame = 0


Query: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60
           M+PGGYTVEVTGLSP A EKDVLDFFAF G IELVEI+RSG+DACTAYVTFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPIATEKDVLDFFAFSGAIELVEIVRSGDDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST-ASAQRSQFISSAGNAVTMA 120
           CLLSGA IVDQRVCITRWGHFDDEFGFWSRP G+ EEDST ASAQRSQFISSAGNAVTMA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTSASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVK 180
           QEVVKTML+MGYVLGKD  TKAK FDESHQVSATAAAKVADLSHRIGLTDM+GAGFEAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGFEAVK 180

Query: 181 TMDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSR 240
           ++D+KYHVL+TTKSAISATGRTAAAAADTVV+S YFSRGALF+SDALNRAAK AADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GVEH 244
           G+EH
Sbjct: 241 GLEH 244

[Close]

BLAST of CmoCh04G017230 vs. NCBI nr
Match: XP_022957393.1 (binding partner of ACD11 1-like [Cucurbita moschata] >XP_022957394.1 binding partner of ACD11 1-like [Cucurbita moschata])

HSP 1 Score: 476.1 bits (1224), Expect = 1.8e-130
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60
           MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA
Sbjct: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120
           CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120

Query: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180
           EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT
Sbjct: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180

Query: 181 MDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 240
           MDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG
Sbjct: 181 MDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 240

Query: 241 VEH 244
           VEH
Sbjct: 241 VEH 243

[Close]

BLAST of CmoCh04G017230 vs. NCBI nr
Match: XP_022988849.1 (binding partner of ACD11 1-like [Cucurbita maxima] >XP_022988857.1 binding partner of ACD11 1-like [Cucurbita maxima] >XP_023534995.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo] >XP_023535002.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474.6 bits (1220), Expect = 5.3e-130
Identity = 242/243 (99.59%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60
           MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA
Sbjct: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120
           CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120

Query: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180
           EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT
Sbjct: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180

Query: 181 MDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 240
           MD+KYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG
Sbjct: 181 MDEKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 240

Query: 241 VEH 244
           VEH
Sbjct: 241 VEH 243

[Close]

BLAST of CmoCh04G017230 vs. NCBI nr
Match: KAG6601420.1 (Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032203.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 470.7 bits (1210), Expect = 7.6e-129
Identity = 241/243 (99.18%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60
           MSPGGYTVEVTGLSPKAEEKDVLDFFAFCG IELVEIIRSGEDACTAYVTFKDAYSQETA
Sbjct: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGLIELVEIIRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120
           CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120

Query: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180
           EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT
Sbjct: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180

Query: 181 MDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 240
           MDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSD LNRAAKVAADLGSRG
Sbjct: 181 MDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDVLNRAAKVAADLGSRG 240

Query: 241 VEH 244
           VEH
Sbjct: 241 VEH 243

[Close]

BLAST of CmoCh04G017230 vs. NCBI nr
Match: XP_038892042.1 (binding partner of ACD11 1 [Benincasa hispida])

HSP 1 Score: 431.4 bits (1108), Expect = 5.1e-117
Identity = 221/244 (90.57%), Postives = 233/244 (95.49%), Query Frame = 0


Query: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60
           M+PGGYTVEVTGLSPKA EKDVLDFFAF G I+LVEIIRSG+DACTAYVTFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIDLVEIIRSGDDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST-ASAQRSQFISSAGNAVTMA 120
           CLLSGA I+DQRVCITRWG+FDDEFGFWSR SG+HEEDST ASAQRSQFISSAGNAVTMA
Sbjct: 61  CLLSGAKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVK 180
           QEVVKTML+MGYVLGKD LTKAK  DESHQVS TAAAKVADLSHRIGLTDMIGAGFEAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVK 180

Query: 181 TMDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSR 240
           TMD+KYHVLQTTKSAISATG+TAAAAADTVV+S YFSRGALF+SDALNRAAKVAADLGSR
Sbjct: 181 TMDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSR 240

Query: 241 GVEH 244
           G+EH
Sbjct: 241 GLEH 244

[Close]

BLAST of CmoCh04G017230 vs. NCBI nr
Match: XP_004135186.1 (binding partner of ACD11 1 [Cucumis sativus] >KGN51899.1 hypothetical protein Csa_008734 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 3.3e-116
Identity = 219/244 (89.75%), Postives = 232/244 (95.08%), Query Frame = 0


Query: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60
           M+PGGYTVEVTGLSP A EKDVLDFFAF G IELVEI+RSGEDACTAYVTFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST-ASAQRSQFISSAGNAVTMA 120
           CLLSGA IVDQRVCITRWGHFDDEFGFWSRP G+ EEDST ASAQRSQFISSAGNAVTMA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVK 180
           QEVVKTML+MGYVLGKD LTKAK FDESHQVSATAAAKVADLSHRIGLTDM+GAG+EAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVK 180

Query: 181 TMDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSR 240
           ++D+KYHVL+TTKSAISATGRTAAAAADTVV+S YFSRGALF+SDALNRAAK AADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GVEH 244
           G+EH
Sbjct: 241 GLEH 244

[Close]

BLAST of CmoCh04G017230 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-77
Identity = 154/238 (64.71%), Postives = 183/238 (76.89%), Query Frame = 0


Query: 5   GYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLS 64
           GY VEVTGLSP     D++DFF+F G I+ ++I+RSGE ACTAYV FKD+YSQETA LL+
Sbjct: 6   GYGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVRSGEQACTAYVMFKDSYSQETAVLLT 65

Query: 65  GATIVDQRVCITRWGHFDDEFGFWSRPS-GYHEE-DSTASAQRSQFISSAGNAVTMAQEV 124
           GATI+DQRVCITRWG   +EF FW+  S G+ +E DS   AQRS+F  +AG AVT AQEV
Sbjct: 66  GATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDSQHYAQRSEF--NAGEAVTKAQEV 125

Query: 125 VKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMD 184
           VK ML+ G+VLGKDAL+KAK FDESH VSA A A+V+ L  RIGLTD I  G EAV+  D
Sbjct: 126 VKIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMTD 185

Query: 185 DKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 241
            +YHV  T KSA+ ATGRTAAAAA +VV S YFS GAL++S AL RAAK A+DLG+RG
Sbjct: 186 QRYHVSDTAKSAVFATGRTAAAAATSVVNSSYFSSGALWLSGALERAAKAASDLGTRG 241

[Close]

BLAST of CmoCh04G017230 vs. TAIR 10
Match: AT3G01210.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 212.6 bits (540), Expect = 3.5e-55
Identity = 127/252 (50.40%), Postives = 163/252 (64.68%), Query Frame = 0


Query: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60
           M P GY  +VT LSP+A EKDV  FF+ CG +ELVEI     DA TAYVTF+DAY+ + A
Sbjct: 1   MYPCGYVAQVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQ-FISSAGNAVTMA 120
            LLSGATIVDQ V I+ +G +  E       +   EED + +  RS  F SS G A+T+A
Sbjct: 61  VLLSGATIVDQTVWISVYGVYLHESN-----NLRQEEDYSVTVTRSDAFASSPGEAITVA 120

Query: 121 QEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVK 180
           Q+VV+TML+ GYVL KDA+ KAK  DES + S+  A K+A++SH +GLT  I +  E V+
Sbjct: 121 QQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELVR 180

Query: 181 TMDDKYHVLQTTKSAI-----------SATGRTAAAAADTVVQSGYFSRGALFVSDALNR 240
           + D+KYH    TKSA+           + TG+ AAAAA +VV S YF+ GAL+ SDAL R
Sbjct: 181 SADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGR 240

[Close]

BLAST of CmoCh04G017230 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 149.4 bits (376), Expect = 3.6e-36
Identity = 89/240 (37.08%), Postives = 137/240 (57.08%), Query Frame = 0


Query: 7   TVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGA 66
           TV+V+ +S +A E+D+ +FF+F G I  +E     + +  AYVTFKD    ETA LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  TIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQEVVKTM 126
           TIVD  V +T    +       +      E + ++S  R        +    A++VV  M
Sbjct: 65  TIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDV-----SVFRKAEDVVSGM 124

Query: 127 LSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAG----FEAVKTMD 186
           +S G+VLGKDA+ KAK+ DE HQ+++TA+A+V     RIG T+ I  G     E VK +D
Sbjct: 125 ISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEVD 184

Query: 187 DKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVE 243
            K+ V + TKSAI+A  +T + A   ++++ Y   GA +V+ A NR +K A ++G +  E
Sbjct: 185 QKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKAKE 239

[Close]

BLAST of CmoCh04G017230 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 149.1 bits (375), Expect = 4.7e-36
Identity = 95/243 (39.09%), Postives = 140/243 (57.61%), Query Frame = 0


Query: 7   TVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGA 66
           TV+V+ +S  A ++D+ +FF+F G I  +E     E    AYVTFKD    ETA LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  TIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISS--AGNAV-TMAQEVV 126
           TIVD  V ++              P      ++ AS +      S  AG++V   A++VV
Sbjct: 65  TIVDSSVIVS------------MAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVV 124

Query: 127 KTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGF----EAVK 186
            +ML+ G++LGKDA+ KAK+ DE HQ+++TA+AKVA    +IG TD I  G     E V+
Sbjct: 125 SSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVR 184

Query: 187 TMDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSR 243
            +D KY V + TKSAI+A  +T + A   ++++ Y   GA +V+ A N+ AK A ++G +
Sbjct: 185 EVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQK 235

[Close]

BLAST of CmoCh04G017230 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 143.3 bits (360), Expect = 2.6e-34
Identity = 89/240 (37.08%), Postives = 136/240 (56.67%), Query Frame = 0


Query: 7   TVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGA 66
           +V+V  LS  A E D+ +FF+F G +E ++I  S E   +AYVTFK+    ETA LLSGA
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEH--SAYVTFKETQGAETAVLLSGA 66

Query: 67  TIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQEVVKTM 126
           +I DQ V I    ++       S P+  H E  ++ A+         + V  A++VV +M
Sbjct: 67  SIADQSVIIELAPNY-------SPPAAPHAETQSSGAE---------SVVQKAEDVVSSM 126

Query: 127 LSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGF----EAVKTMD 186
           L+ G++LGKDA+ KAK FDE H  ++TA A VA L  +IGL+  + AG     E +K +D
Sbjct: 127 LAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVD 186

Query: 187 DKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVE 243
             + V + TKS  +A  +T ++A   V+++ Y   G  + + A NR A+ A ++G +  E
Sbjct: 187 QNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKE 228

The following BLAST results are available for this feature:

BLAST of CmoCh04G017230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	2.4e-32	37.08	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	2.6e-07	26.44	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of CmoCh04G017230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H035	8.8e-131	100.00	binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458806 PE...	[more]
A0A6J1JE77	2.6e-130	99.59	binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486072 PE=4...	[more]
A0A0A0KSM6	1.6e-116	89.75	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604930 PE=4 SV...	[more]
A0A5D3CVI0	6.1e-116	89.34	Binding partner of ACD11 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BET5	6.1e-116	89.34	binding partner of ACD11 1 OS=Cucumis melo OX=3656 GN=LOC103489100 PE=4 SV=1	[more]

BLAST of CmoCh04G017230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957393.1	1.8e-130	100.00	binding partner of ACD11 1-like [Cucurbita moschata] >XP_022957394.1 binding par...	[more]
XP_022988849.1	5.3e-130	99.59	binding partner of ACD11 1-like [Cucurbita maxima] >XP_022988857.1 binding partn...	[more]
KAG6601420.1	7.6e-129	99.18	Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_038892042.1	5.1e-117	90.57	binding partner of ACD11 1 [Benincasa hispida]	[more]
XP_004135186.1	3.3e-116	89.75	binding partner of ACD11 1 [Cucumis sativus] >KGN51899.1 hypothetical protein Cs...	[more]

BLAST of CmoCh04G017230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14340.1	1.1e-77	64.71	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G01210.1	3.5e-55	50.40	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	3.6e-36	37.08	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	4.7e-36	39.09	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	2.6e-34	37.08	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..77 e-value: 2.4E-5 score: 33.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 10..70 e-value: 2.8E-6 score: 27.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..72 score: 8.705814
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 5..76 e-value: 1.4E-8 score: 36.5
None	No IPR available	PANTHER	PTHR32343:SF26	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 1..242
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..242
IPR034360	Vip1-like, RNA recognition motif, plant	CDD	cd12269	RRM_Vip1_like	coord: 8..76 e-value: 5.28079E-34 score: 115.235
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 5..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G017230.1	CmoCh04G017230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding