CmoCh04G017130 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTCAGGAATTAGATCAGAAGGTCCCCTCTCTTTAACTGGCCTGCAGGATTTATCGCTGATATCCCATCTTCCCGCCACGTCTCTGAATGCGACTCCGTCAGCTGCCACCAGCATTGAAATGGTCAGCACCTCCCTCTCTCTCTGGCTGTAAGAAAGTCCCACGCATCGAAGCTTGCGTTGCGTTGGTCTTTTTTGCGGTCTGGTTTCGTCCTCTCGATCATATGGCCTTATAATTACACAATGTACCTAATAGGTAGATTTTGATATTTACTTAAAATAAAAAAAATGAAAAAACAAACTACTAATAAAATAAAAGTATCATTTAAATGACTAAATTCTTAAATTTTATTTTAATTTAAATTATAATCTTAAATATTAAAATGTCCATAAAAATAAATATAAAAAGCGGATATATATATATATATTGTGAAGGAAATAAAAGAAATAACATTAATATATATTTAAGTGGCAACTCGTTAGTGGCCTAATTAGAAAGACGGTTTTGTTGTGCATGATCAAACGGCGTCGTCTGGAAATAATTTTAATTTTTTTTTTTTCATCGCCGACCAGTCCCAGTTAACGTAGCATTCCGGGTATCCACTCCGGACTTAATTTTTTGTCCTCCTCCGAGACCCCATTTCTCCTCCCTAGGGCTTCCGATTTGACGACACCACTATGGCTATGCAAACTGGAGTAGGCCTTTCGAAGATTCTGATTCTTGTTGGAGCTGGTATTTCAACTAGACTTCTAATCTATTTAATTTATACGTTCATGCTGTTTATATGATCTAAAACCAATTTTTTTCGAGAGTATGTCACGATTGTTAATGTTGTTATTGTGTTTGTTTTTACAGGATACTCTAGTACGATCCTGCTTAAGAATGGTAAATTATCGGATGTGTTGGGTGAACTTCAGGTGTCGATTTTTCTTATTTTGGCTGTTTTTTTTTATTTTTCTGCTTAATTAGCTCCAATGTTGCGTGGCATTAGGAATTTTTTTGGGAAAGTTCCAAGATGCTATTGACTTTTTATCTAATTGGCGATGGAACGTTCGTGAAAGGTGTTTTAAATTATTATTGTCATCGTTTATTTACGGTGGACTTCAATATCTCACTTTCTAGATTATTGTTGTAACGGAATAGCTTATTGGATGTCTCATAAATTTGCTCAAACTAGTTCAAATGATAAACTAGGCTCAACAAAGCGTTGGAACATTTGTTTTGTTTCCGTATGAGTGACTGCATTTTCTATTGTTGTGCTTACAGTCCTTGGTGAAGGGCTTAGAGAAGTCTGGGGAACAATATGTGGGTGATTCTGACTACTCTGATGCCATTGCTGCTCAGGTGCTGATAAAATATATGCATTTTAAAGAGGTATTGTCCGATAGTTTTTTTATGTGGTTAATGAAACGTCTATCTGACTGTCGTGTAGGTGCGTCGATTAGCTATGGAAGTTCGGCATCTCTCTTCTTCACGACAGATTACTATTCTCAATGGAAACTCTGGAACTGTTGGCAAGTCAGCTTATTTTTAATCAATTCATTTGCAAATTGCATAATTTAAGAACTTTGATAATGTGCCAATAAATTGGATCGTTGCTTTCACTTCAAAGGTAATAGTTTTCTGTGCCATTGACTGCCTTTTAATCATTTATTTATTTTAACAGGTAATATATCATCTTTCATAATTCCAGCTGCTACTTTGGGTGCCTTGGGATATGGATACATGTGGTGGAAGGTAATGTTAGATTTTTTTTCAAGTGTTCTAAAGTTGCTTTTTATGTGCCCAAAATTTAATGTCTTCTGTAATTTTTTTCTCTCTTTACTTTTCTATCAATAAGTCATTACCTTTTTAAGCCTTGATTTTTTAAAATGCGTTTTTATTAAACTTGTTAAAAGAAATGTTCCATAGTGTTTCAAATTGGTGGTTTGTCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTCAAAATTGTGCTTTGTTTTCTTTTGGAGGGACATTTTGAGACTTGAACTCGAGACCTCTTGCACCCAAAGCAAGAATTATACCACTATAACAAATGCCCTTATAATGGACCATATATTAAGTTGTTAATGGAATGTATCATCATTATTTCATTTATTTTCTTTGTTAATGAAATCCATGAGCAATAATTATTATATCTTTTAGATCTAGACCGCTGTTAAATTATTTACATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCATAACTCATATCTTATTTATTCTTTCTGTTTGAACAGGGGTTTTCATTCTCAGACCTTATGTATGTTACAAAGCGCAATATGGCTAATGCTGTCTCAAACTTAACTAAACATTTGGAGCACGTATCAGAGGCCCTTGCTGTAAGTGTGGTCTAGTATGCTCTTCAACCTGTTTTATTTAGAGGGAAAGAAGTGTGTGTATAGCTTGTTTCGTAGTGTTACTATTATTTTTTTAAAATTCATGACTTTTTAGAAGTTGACATGTCCTCTTCATATCCTTGTTGAAAATCTCATTTATGATCTACTATGACGTAATTGGATGCTTGATTAATAGTTGCATATTTCTGCATATTAATGCTTAATCCATATTTCAGATAGTACTGATATTTATTAATTCTTTTCTTTTTCCTGCTGTGTATATTGTAGAACTAGGTATAATAAAACATCCAACTCATTTACCCCACCCCTCAAGCCGTTTATTTTCCTTTTCCACCTTTTTTAATTGGAAACTTTTTTTTTTTTTCATAATGATGGTTTAATTTGTCCAACTCTGAATAAAGTATGCTATGGAGAAAAATTGTCCCTTTTTCATCAGGTTTTGAATAACTGCTCCTGCAGAATGACGCAGGAAATAAAGAAGTACCATTTTTGAACGTTTGTTTGTTTGTTTCCTGTGAGACTGTGATTTGTGATTATTGAGTGTGCTGTCACTGTTAAGTCAACTACTCTTTTATTGGGGTTGGAAATTGTCAAATTGTTACAAAAATGAATAAGGAATGTGTTGACATTTTTTTACTTATTTCTTTTGTTAAATAGGCAACAAAGAGGCATTTGACACAGCGGATTGAGAACTTGGATGATAAGATGTTGAAGCAGAATGAACTCTCGAAATTGATCAAAGAAGATGTATGTGACTAATGATTTTGCAGTTCTATAAACTTGACTGTTGAGTTTTTACATAATGTGCAAGTTTAAGGAAACCAATATGTTTTTGTATGGTGTAGGCATGTGCTAGTGTTCAGAAATTTTGTTAAATGATGAATGGATACATGGACTTTGTGGTGATCTGAAGTTATCCTGATGTAAATAAATTTTATACCTCGAAAAATACTGTTATTTATTTTTTTATTTTTATTTTTATTTCTTAGCATTACATACATATATATATATATATATATTTTTTTTTTAAAAAAAAATCTTTTGCTATGTTGAAACTGCTACAACCCATCATACTACACTTTTTTTCCCAGAGCGTTATTATTTTTTATTTAAGAAAAAAACTAAAAAGATAAAAGTTATATATAAATAATTGCATGTATCCAACGCTATGAGGTGTCTGAATGTTATCAAAATTTTAAGTGCCAAGTCTCCAAGAAATATTGATAACTTCCATATAATATGATCGCAAATAAAAGCCAAGCTGCTTTCTTATCTCTATATAGATGTAGTACGTTCGAAATTTTGTTCACATGAAGGGGTAGTTTACATCATGTTTTGATATGGTTAAGATTGGTGGAACAGGTAGCAGAAGTTCAAAAATCTCTTTCTGGCATCGACTTTGACTTGGCTCAGTTGCAAAACATGGTTTCTGGTTTGGTGAGTTTTCCATGAAAGTAGTTGTAAAACTAATATATGTTTCTATCTCATAAGATTGGTAATCTGATCCATCTGTTGCATTTACTATGCCGTTGCTTTGACAGTTGTACTTGCAGACATGTCAAATCATTTTTTTCAGTAACTGCTTCTGGTTTCGAATTTGATAAGTGATGAGGGATTCTCTAGAATTCGCGTTTACTGACAGGGATATGACATTAAAAGAAATTATTTATGGTGTATCACTTTTACTTGAGCATTAATTACCATACATCTCTTCTCTTGTTTCAGGATGGGAAACTATCTTCTCTTGAATATAAGCAGGTGAGAAACTTTCTCTTTTATTTTTTTGGGTGCATATAGTACTGACTTTGTCAGTTTGACTGGTTTTCTTTTATACCTTAAAAGGCTAGGTCTCCAACCAAATAGAATAAAATTGGGTGACGTATCGCCTACGTATTTAGAATAGGGAGGTTTCCCAAAGTCGTTCTCATTTCCTGATATGATTTTGTTTTTTTATTATTGCAAAGTCATTTCTACTATTACGATATTGGGAACTTTGCTTATGATGATCCGTTACTTTCAGGAACTTGCAAATGTTGGTGTATTGTACTTGTGCAACTTTGTTGATGGAAAGCAAGCGAAAATGTCTGAAACTGTAAAGGTTGGATACAGTACTTGTGCAAATTAGCCTGAACTGGAAAACAAAACAACTCAACTATACCCATTATCAGATGCGATTATTTTGTTTCAACTTTCTCTCAATAATCGGGTCCTGTGACTCACTAATTAATTTCATTGTTGGTCGGAGGGGTCCTTAAGTTACATTTCTTTTATTTTTCTCATATTTATCACATGTGTCTGTTGATCAAGTGAACTACTTGACTCAATTATTTCCATTTTTTATTATTTCAATTTTTGAACTGATGTTACATGTTGTATCCCGGTACTTGCAGGAGCAGCTTAAACTTCCAGGCAGGACTCAGGGTCTGCTGACGCATCTGGAAACTCCTAATCTGAAGGTATGCATTATGCAACAACCCCCAATTGATTGAAGGGGGAATGCATATAACGTGAAGTACTTTTGCAATTTGTGATAATTTAAGCGCAATGTTTTTTATTCTCAATGGCAACCGTTGTGCCAACTTTCTAAAGCTTGGGCCGTTGTCAAGTATGAAACAATTATTCCTTCATTCACAAATATAATTTTTGTTGTGGAAGCACCAAATGCCCTTTCAAAACTTTCTATGATCAACATTTGCTTCTCAATTTTACCGAAACGCATCAAACAGAGGGTTATTCATTTACCTGTCTTAAATAACTTTTAATTTTTATTACTTGTTTGTAAGTATCCAAATGATTCTTTCAGGGTCTTAAAGAACTTACTGATACGCTTTCACGAGATTTTACAGAAGGTCAACCAAGAGCCCTTCTCAGGTTTGAGGACTTTTGGTTTCATCTTGATTTTCCCCCTGTTTTCAGATTATTAGTGTATACATGTAGAAGAAGTGATTAATGTTCACTAATGTGCAACAGTGTTGTTTAACTGGGTTGTTCTCATTATACTTTGAGAAATTGGAATTTGAAAGGACCAACATCCCTTATCTGCCCCGAGATAACCCGATTTCCATTTCCATGTCTCGTGCTAGTTCGATTATGTGA ATGAATTCAGGAATTAGATCAGAAGGTCCCCTCTCTTTAACTGGCCTGCAGGATTTATCGCTGATATCCCATCTTCCCGCCACGTCTCTGAATGCGACTCCGTCAGCTGCCACCAGCATTGAAATGGGCTTCCGATTTGACGACACCACTATGGCTATGCAAACTGGAGTAGGCCTTTCGAAGATTCTGATTCTTGTTGGAGCTGGATACTCTAGTACGATCCTGCTTAAGAATGGTAAATTATCGGATGTGTTGGGTGAACTTCAGTCCTTGGTGAAGGGCTTAGAGAAGTCTGGGGAACAATATGTGGGTGATTCTGACTACTCTGATGCCATTGCTGCTCAGGTGCGTCGATTAGCTATGGAAGTTCGGCATCTCTCTTCTTCACGACAGATTACTATTCTCAATGGAAACTCTGGAACTGGGTTTTCATTCTCAGACCTTATGTATGTTACAAAGCGCAATATGGCTAATGCTGTCTCAAACTTAACTAAACATTTGGAGCACGTATCAGAGGCCCTTGCTGCAACAAAGAGGCATTTGACACAGCGGATTGAGAACTTGGATGATAAGATGTTGAAGCAGAATGAACTCTCGAAATTGATCAAAGAAGATGTAGCAGAAGTTCAAAAATCTCTTTCTGGCATCGACTTTGACTTGGCTCAGTTGCAAAACATGGTTTCTGGTTTGGATGGGAAACTATCTTCTCTTGAATATAAGCAGGAACTTGCAAATGTTGGTGTATTGTACTTGTGCAACTTTGTTGATGGAAAGCAAGCGAAAATGTCTGAAACTGTAAAGGAGCAGCTTAAACTTCCAGGCAGGACTCAGGGTCTGCTGACGCATCTGGAAACTCCTAATCTGAAGGGTCTTAAAGAACTTACTGATACGCTTTCACGAGATTTTACAGAAGGTCAACCAAGAGCCCTTCTCAGGACCAACATCCCTTATCTGCCCCGAGATAACCCGATTTCCATTTCCATGTCTCGTGCTAGTTCGATTATGTGA ATGAATTCAGGAATTAGATCAGAAGGTCCCCTCTCTTTAACTGGCCTGCAGGATTTATCGCTGATATCCCATCTTCCCGCCACGTCTCTGAATGCGACTCCGTCAGCTGCCACCAGCATTGAAATGGGCTTCCGATTTGACGACACCACTATGGCTATGCAAACTGGAGTAGGCCTTTCGAAGATTCTGATTCTTGTTGGAGCTGGATACTCTAGTACGATCCTGCTTAAGAATGGTAAATTATCGGATGTGTTGGGTGAACTTCAGTCCTTGGTGAAGGGCTTAGAGAAGTCTGGGGAACAATATGTGGGTGATTCTGACTACTCTGATGCCATTGCTGCTCAGGTGCGTCGATTAGCTATGGAAGTTCGGCATCTCTCTTCTTCACGACAGATTACTATTCTCAATGGAAACTCTGGAACTGGGTTTTCATTCTCAGACCTTATGTATGTTACAAAGCGCAATATGGCTAATGCTGTCTCAAACTTAACTAAACATTTGGAGCACGTATCAGAGGCCCTTGCTGCAACAAAGAGGCATTTGACACAGCGGATTGAGAACTTGGATGATAAGATGTTGAAGCAGAATGAACTCTCGAAATTGATCAAAGAAGATGTAGCAGAAGTTCAAAAATCTCTTTCTGGCATCGACTTTGACTTGGCTCAGTTGCAAAACATGGTTTCTGGTTTGGATGGGAAACTATCTTCTCTTGAATATAAGCAGGAACTTGCAAATGTTGGTGTATTGTACTTGTGCAACTTTGTTGATGGAAAGCAAGCGAAAATGTCTGAAACTGTAAAGGAGCAGCTTAAACTTCCAGGCAGGACTCAGGGTCTGCTGACGCATCTGGAAACTCCTAATCTGAAGGGTCTTAAAGAACTTACTGATACGCTTTCACGAGATTTTACAGAAGGTCAACCAAGAGCCCTTCTCAGGACCAACATCCCTTATCTGCCCCGAGATAACCCGATTTCCATTTCCATGTCTCGTGCTAGTTCGATTATGTGA MNSGIRSEGPLSLTGLQDLSLISHLPATSLNATPSAATSIEMGFRFDDTTMAMQTGVGLSKILILVGAGYSSTILLKNGKLSDVLGELQSLVKGLEKSGEQYVGDSDYSDAIAAQVRRLAMEVRHLSSSRQITILNGNSGTGFSFSDLMYVTKRNMANAVSNLTKHLEHVSEALAATKRHLTQRIENLDDKMLKQNELSKLIKEDVAEVQKSLSGIDFDLAQLQNMVSGLDGKLSSLEYKQELANVGVLYLCNFVDGKQAKMSETVKEQLKLPGRTQGLLTHLETPNLKGLKELTDTLSRDFTEGQPRALLRTNIPYLPRDNPISISMSRASSIM Homology
BLAST of CmoCh04G017130 vs. ExPASy TrEMBL
Match: A0A6J1GY34 (uncharacterized protein LOC111458539 OS=Cucurbita moschata OX=3662 GN=LOC111458539 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 4.9e-132 Identity = 262/288 (90.97%), Postives = 263/288 (91.32%), Query Frame = 0
BLAST of CmoCh04G017130 vs. ExPASy TrEMBL
Match: A0A6J1KLR1 (uncharacterized protein LOC111494386 OS=Cucurbita maxima OX=3661 GN=LOC111494386 PE=4 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 3.9e-129 Identity = 257/288 (89.24%), Postives = 260/288 (90.28%), Query Frame = 0
BLAST of CmoCh04G017130 vs. ExPASy TrEMBL
Match: A0A6J1HTC5 (uncharacterized protein LOC111467623 OS=Cucurbita maxima OX=3661 GN=LOC111467623 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 6.7e-121 Identity = 242/289 (83.74%), Postives = 252/289 (87.20%), Query Frame = 0
BLAST of CmoCh04G017130 vs. ExPASy TrEMBL
Match: A0A6J1G0S9 (uncharacterized protein LOC111449632 OS=Cucurbita moschata OX=3662 GN=LOC111449632 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 6.7e-121 Identity = 242/289 (83.74%), Postives = 252/289 (87.20%), Query Frame = 0
BLAST of CmoCh04G017130 vs. ExPASy TrEMBL
Match: A0A6J1DCD3 (uncharacterized protein LOC111019198 OS=Momordica charantia OX=3673 GN=LOC111019198 PE=4 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 9.6e-120 Identity = 240/288 (83.33%), Postives = 252/288 (87.50%), Query Frame = 0
BLAST of CmoCh04G017130 vs. NCBI nr
Match: XP_022957047.1 (uncharacterized protein LOC111458539 [Cucurbita moschata]) HSP 1 Score: 480.7 bits (1236), Expect = 1.0e-131 Identity = 262/288 (90.97%), Postives = 263/288 (91.32%), Query Frame = 0
BLAST of CmoCh04G017130 vs. NCBI nr
Match: KAG6601413.1 (hypothetical protein SDJN03_06646, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 476.9 bits (1226), Expect = 1.5e-130 Identity = 260/288 (90.28%), Postives = 261/288 (90.62%), Query Frame = 0
BLAST of CmoCh04G017130 vs. NCBI nr
Match: XP_023000123.1 (uncharacterized protein LOC111494386 [Cucurbita maxima]) HSP 1 Score: 471.1 bits (1211), Expect = 8.1e-129 Identity = 257/288 (89.24%), Postives = 260/288 (90.28%), Query Frame = 0
BLAST of CmoCh04G017130 vs. NCBI nr
Match: KAG7013162.1 (hypothetical protein SDJN02_25918 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 444.5 bits (1142), Expect = 8.1e-121 Identity = 242/287 (84.32%), Postives = 252/287 (87.80%), Query Frame = 0
BLAST of CmoCh04G017130 vs. NCBI nr
Match: XP_022945380.1 (uncharacterized protein LOC111449632 [Cucurbita moschata] >XP_023542279.1 uncharacterized protein LOC111802221 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 443.7 bits (1140), Expect = 1.4e-120 Identity = 242/289 (83.74%), Postives = 252/289 (87.20%), Query Frame = 0
BLAST of CmoCh04G017130 vs. TAIR 10
Match: AT1G27000.1 (Protein of unknown function (DUF1664) ) HSP 1 Score: 266.9 bits (681), Expect = 2.1e-71 Identity = 149/266 (56.02%), Postives = 186/266 (69.92%), Query Frame = 0
BLAST of CmoCh04G017130 vs. TAIR 10
Match: AT2G02730.1 (Protein of unknown function (DUF1664) ) HSP 1 Score: 228.0 bits (580), Expect = 1.1e-59 Identity = 131/269 (48.70%), Postives = 184/269 (68.40%), Query Frame = 0
BLAST of CmoCh04G017130 vs. TAIR 10
Match: AT2G02730.2 (Protein of unknown function (DUF1664) ) HSP 1 Score: 228.0 bits (580), Expect = 1.1e-59 Identity = 131/269 (48.70%), Postives = 184/269 (68.40%), Query Frame = 0
BLAST of CmoCh04G017130 vs. TAIR 10
Match: AT1G04960.1 (Protein of unknown function (DUF1664) ) HSP 1 Score: 175.6 bits (444), Expect = 6.5e-44 Identity = 107/276 (38.77%), Postives = 171/276 (61.96%), Query Frame = 0
BLAST of CmoCh04G017130 vs. TAIR 10
Match: AT1G04960.2 (Protein of unknown function (DUF1664) ) HSP 1 Score: 153.3 bits (386), Expect = 3.5e-37 Identity = 94/258 (36.43%), Postives = 156/258 (60.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|