CmoCh04G016000 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G016000
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr04: 8150465 .. 8152269 (-)
RNA-Seq Expression	CmoCh04G016000
Synteny	CmoCh04G016000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGCTCTACACATGAAAAAAGCAAGCGCCAGGCCACCAATGTGCATCATTCAAGACTAAAAGGAATGGGGGTGAATTTGGCCCCCCAACCAATATCCATTGTCGTAAAGTTGGCACTTATCCTTTCGGGAAGTGAGGGCCCTAAATTTGTCCTTACTCTCATTTCATCATTCACCCTTAGCGTCCCATCAGCCATCCACTAATGTAGAGTCAGTCCCTCTCCCAAAGTGTAAGGTTTCTTTTCCAGTAGAGTATCTAAAAAGGCTGAGATTAGAGACGAAAAAAGGAGAGACAATTTCATTGCTGCCTTAAAAGTTTGCTGCCGAAGAAGACAAGAGAGCTTAAGAAAAGTACAGAAGAGCTCAAGAACGGTGAGTGAAATTTTTGACCAATCAGACCGATTCTTGAGAGTAGAGTCTCACTTAATAAGATTGAGGTGGCGGTTACTATGACAAGAAGAGTAGAAGTGGGCTAACTGTTCGAAACTTCTCTAAAATATTGTCTTTATCGTAAGAGCTAACTTGAGTGTTTCCCTTTCACTTCCATCTTTGAACATCCTTGAACATCTTTGAAAAATTTCCAAGGGTGTGAGTCAGGGAAGAGATAATCTATATTCACATAGGACATTCCAAATCGTGTACAGTAATCTCCTTTGAGGTATATAAGTATATATTAAGTGGGTAGTGATAAATCTGATGAGAATGCTCGCTCTCTTTTCTTTGAGGAGAAAACAAAATCTGAAAAAAGTCTTCCTTTTGTACAAATTCAACTGAAGCTATACACTTAAGAAATCCTTGATATGATCCATCATTTCAAGGGTCCGAGTTTGAGAGAGTTGTGACTTGTTCAGAACCTGAAACGCATGGCCAACTCCTTCATAGACCACATAATTGATCAGCTTACCCACTCTATGTAAAGCAGAGCAAAACTCCAAGTTCCTATCTTTCAATATGTCCATTTCTGATATACATATCAAACTAGGCAAAACCCTCAAATCCTCAACCTCAAACACCCCATTTGCCGAAGGGTTGCACCATGGATGGTCACGGTTCGCCCTGGACGGCAATGCCAACCGCCAGTACGTATCAGAAACTGCCGTCGTCAGTGGCGAATGAGGAGGTTGGACAAGAAACTTTTCTGACATGGTCCTTGACTCTCCACCGAAGAACGGCTGTATCAAAATGTTACCTTTAATAACTAACGGTTTCATGACCACAGCTCCAGAAGCAGTCGTCTTGCCACCAAGTCTGGCTGCTACATTGAAGGCTATGTTGCCACCGGCACTATCACCTCCAAGGTAGATTTTGGTAAAGTCGCAGTATCTTGACCACCAATTCTGCTTGGCCCCATTAAAGGCAACTTGTTTCAACCATTGAAGGGTCTTTAATCCGTCTTCATAAGGAGCAGGAAGAGGGTTTTCTGGAGCCAAACGATAATTCACAGACATAATTATACAGTCAGCTTTTGCAGATAGCTTGGCCAGGAACTCATGGTAGCAACTCCAAGTAGCCGAGCCGACACAAAACCCACCTCCATGGAAATATACAAGCAAAGGCAGCTTCTCCTGGCATTGTGTTGGAATGTAGAAACGAGCCCAAATGTTGTTCAGCTTATCCACAACTACATCCCAAGAAGTAACACCAAGCTCTGGTGGCAATGCATTAGAGACACTGGGAACTATCTGGGGTCTTTCCACATAACCATTTCCGTAAACTCTAATGAGGCCTTCAATCTCCTCAACCAACACAGAATGTTGATCAAACCCATTACCATGCTCTTCAAAACTTGGAATTTGATCTAG

mRNA sequence

ATGGCTAGCTCTACACATGAAAAAAGCAAGCGCCAGGCCACCAATGTGCATCATTCAAGACTAAAAGGAATGGGGGTGAATTTGGCCCCCCAACCAATATCCATTGTCGTAAAAGTATCTAAAAAGGCTGAGATTAGAGACGAAAAAAGGAGAGACAATTTCATTGCTGCCTTAAAAGTTTGCTGCCGAAGAAGACAAGAGAGCTTAAGAAAAGTACAGAAGAGCTCAAGAACGAACCTGAAACGCATGGCCAACTCCTTCATAGACCACATAATTGATCAGCTTACCCACTCTATGCAAAACCCTCAAATCCTCAACCTCAAACACCCCATTTGCCGAAGGGTTGCACCATGGATGGTCACGGTTCGCCCTGGACGGCAATGCCAACCGCCAGTACGTATCAGAAACTGCCGTCGTCAGTGGCGAATGAGGAGCTCCAGAAGCAGTCGTCTTGCCACCAAGTCTGGCTGCTACATTGAAGGCTATGTTGCCACCGGCACTATCACCTCCAAGCTTGGCCAGGAACTCATGGTAGCAACTCCAAGTAGCCGAGCCGACACAAAACCCACCTCCATGGAAATATACAAGCAAAGGCAGCTTCTCCTGGCATTGTGTTGGAATGTAGAAACGAGCCCAAATGTTGTTCAGCTTATCCACAACTACATCCCAAGAAGTAACACCAAGCTCTGGTGGCAATGCATTAGAGACACTGGGAACTATCTGGGGTCTTTCCACATAACCATTTCCGTAAACTCTAATGAGGCCTTCAATCTCCTCAACCAACACAGAATGTTGATCAAACCCATTACCATGCTCTTCAAAACTTGGAATTTGATCTAG

Coding sequence (CDS)

ATGGCTAGCTCTACACATGAAAAAAGCAAGCGCCAGGCCACCAATGTGCATCATTCAAGACTAAAAGGAATGGGGGTGAATTTGGCCCCCCAACCAATATCCATTGTCGTAAAAGTATCTAAAAAGGCTGAGATTAGAGACGAAAAAAGGAGAGACAATTTCATTGCTGCCTTAAAAGTTTGCTGCCGAAGAAGACAAGAGAGCTTAAGAAAAGTACAGAAGAGCTCAAGAACGAACCTGAAACGCATGGCCAACTCCTTCATAGACCACATAATTGATCAGCTTACCCACTCTATGCAAAACCCTCAAATCCTCAACCTCAAACACCCCATTTGCCGAAGGGTTGCACCATGGATGGTCACGGTTCGCCCTGGACGGCAATGCCAACCGCCAGTACGTATCAGAAACTGCCGTCGTCAGTGGCGAATGAGGAGCTCCAGAAGCAGTCGTCTTGCCACCAAGTCTGGCTGCTACATTGAAGGCTATGTTGCCACCGGCACTATCACCTCCAAGCTTGGCCAGGAACTCATGGTAGCAACTCCAAGTAGCCGAGCCGACACAAAACCCACCTCCATGGAAATATACAAGCAAAGGCAGCTTCTCCTGGCATTGTGTTGGAATGTAGAAACGAGCCCAAATGTTGTTCAGCTTATCCACAACTACATCCCAAGAAGTAACACCAAGCTCTGGTGGCAATGCATTAGAGACACTGGGAACTATCTGGGGTCTTTCCACATAACCATTTCCGTAAACTCTAATGAGGCCTTCAATCTCCTCAACCAACACAGAATGTTGATCAAACCCATTACCATGCTCTTCAAAACTTGGAATTTGATCTAG

Protein sequence

MASSTHEKSKRQATNVHHSRLKGMGVNLAPQPISIVVKVSKKAEIRDEKRRDNFIAALKVCCRRRQESLRKVQKSSRTNLKRMANSFIDHIIDQLTHSMQNPQILNLKHPICRRVAPWMVTVRPGRQCQPPVRIRNCRRQWRMRSSRSSRLATKSGCYIEGYVATGTITSKLGQELMVATPSSRADTKPTSMEIYKQRQLLLALCWNVETSPNVVQLIHNYIPRSNTKLWWQCIRDTGNYLGSFHITISVNSNEAFNLLNQHRMLIKPITMLFKTWNLI

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh04G016000 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh04G016000 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh04G016000 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh04G016000 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G016000.1	CmoCh04G016000.1	mRNA