CmoCh04G015280 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G015280
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	inactive protein RESTRICTED TEV MOVEMENT 2
Location	Cmo_Chr04: 7812076 .. 7813059 (+)
RNA-Seq Expression	CmoCh04G015280
Synteny	CmoCh04G015280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACCACAAGGCCAAGAACCGCCGTCAATCCCAGCGGGTTTACAACGAGCTCTTCACTCCCAAAGTTGAAGAAAGAGATGAAAACGAAGCTCATATTCTACTGCTCCAACTTCCTGGTCCTAATTTTGGCCTGTTCTTCATTTTCTAAACAATTTAATCATTTTTTTTTAGCTTCCGGTCTGATTTTTCCTTTGTTTTTTGGATTCGTTTGACCAGATTTCAACCAGCAGCATGTTAAGGTTAAGGTTGAAAAAGAGGCAGGGACGGTGGTGGTGACCGGAGATCGGAATGTGGGAAATAATAGGTTGCTTATATTGAATAAAACTTACCCAATTCCACGAAATTCCGTAATCGATCGAATTTCTCATACATTACGAGATGGAGTTCTCACCATTACAATGCCCAAACAAACTGCCGAGTCCGCCACGCCACCAACTACTACTCCGCTGCCCAAAGAATCAGAACAATCCACCCCTGAGAAGGGGAGAGAAGAAACTCCGTTGGAAAAATCAGCTCTGCCGGAGATGAATGGTGAAATTAAGGAACCAGAGGCGGCGGCTCTTCCGAAAGACGATTCAAGTTCATCGAAAGATAAGGGAAAATCTGCAGAACTCCAAAAGCAGGCCTCGGCGAAGGCTAATGAAGAAACTCCGGCGGCGGCGGCTGAAAGGGGTCAGGTACAAGGGGATTCCGGCAAGGCGGAAACGACGCTGGATCGGAAAATTAGCAGCCCAGATCAGAAGAAGCCAACAGAGAAGAAAGAAATTGAAAATCAAAATCCAGAAAAGGGGAGGGAATCTAAAACAGAGGAGGTAGATAAGAATGTGGGAACAGCCAAGATCGACGCCGTAACTCCATCTCCGAGAACGACCAGAGTAGGGAAACTTCCCGGCGGCTTCACTGTCCAAAGGATGCAGTTACTGACGACGGTGAGTCTCTCGGCGGCGGTTGTGATAGCGGTGTTGGCATATTTCGCATAA

mRNA sequence

ATGGCAACCACAAGGCCAAGAACCGCCGTCAATCCCAGCGGGTTTACAACGAGCTCTTCACTCCCAAAGTTGAAGAAAGAGATGAAAACGAAGCTCATATTCTACTGCTCCAACTTCCTGGTCCTAATTTTGGCCTATTTCAACCAGCAGCATGTTAAGGTTAAGGTTGAAAAAGAGGCAGGGACGGTGGTGGTGACCGGAGATCGGAATGTGGGAAATAATAGGTTGCTTATATTGAATAAAACTTACCCAATTCCACGAAATTCCGTAATCGATCGAATTTCTCATACATTACGAGATGGAGTTCTCACCATTACAATGCCCAAACAAACTGCCGAGTCCGCCACGCCACCAACTACTACTCCGCTGCCCAAAGAATCAGAACAATCCACCCCTGAGAAGGGGAGAGAAGAAACTCCGTTGGAAAAATCAGCTCTGCCGGAGATGAATGGTGAAATTAAGGAACCAGAGGCGGCGGCTCTTCCGAAAGACGATTCAAGTTCATCGAAAGATAAGGGAAAATCTGCAGAACTCCAAAAGCAGGCCTCGGCGAAGGCTAATGAAGAAACTCCGGCGGCGGCGGCTGAAAGGGGTCAGGTACAAGGGGATTCCGGCAAGGCGGAAACGACGCTGGATCGGAAAATTAGCAGCCCAGATCAGAAGAAGCCAACAGAGAAGAAAGAAATTGAAAATCAAAATCCAGAAAAGGGGAGGGAATCTAAAACAGAGGAGGTAGATAAGAATGTGGGAACAGCCAAGATCGACGCCGTAACTCCATCTCCGAGAACGACCAGAGTAGGGAAACTTCCCGGCGGCTTCACTGTCCAAAGGATGCAGTTACTGACGACGGTGAGTCTCTCGGCGGCGGTTGTGATAGCGGTGTTGGCATATTTCGCATAA

Coding sequence (CDS)

ATGGCAACCACAAGGCCAAGAACCGCCGTCAATCCCAGCGGGTTTACAACGAGCTCTTCACTCCCAAAGTTGAAGAAAGAGATGAAAACGAAGCTCATATTCTACTGCTCCAACTTCCTGGTCCTAATTTTGGCCTATTTCAACCAGCAGCATGTTAAGGTTAAGGTTGAAAAAGAGGCAGGGACGGTGGTGGTGACCGGAGATCGGAATGTGGGAAATAATAGGTTGCTTATATTGAATAAAACTTACCCAATTCCACGAAATTCCGTAATCGATCGAATTTCTCATACATTACGAGATGGAGTTCTCACCATTACAATGCCCAAACAAACTGCCGAGTCCGCCACGCCACCAACTACTACTCCGCTGCCCAAAGAATCAGAACAATCCACCCCTGAGAAGGGGAGAGAAGAAACTCCGTTGGAAAAATCAGCTCTGCCGGAGATGAATGGTGAAATTAAGGAACCAGAGGCGGCGGCTCTTCCGAAAGACGATTCAAGTTCATCGAAAGATAAGGGAAAATCTGCAGAACTCCAAAAGCAGGCCTCGGCGAAGGCTAATGAAGAAACTCCGGCGGCGGCGGCTGAAAGGGGTCAGGTACAAGGGGATTCCGGCAAGGCGGAAACGACGCTGGATCGGAAAATTAGCAGCCCAGATCAGAAGAAGCCAACAGAGAAGAAAGAAATTGAAAATCAAAATCCAGAAAAGGGGAGGGAATCTAAAACAGAGGAGGTAGATAAGAATGTGGGAACAGCCAAGATCGACGCCGTAACTCCATCTCCGAGAACGACCAGAGTAGGGAAACTTCCCGGCGGCTTCACTGTCCAAAGGATGCAGTTACTGACGACGGTGAGTCTCTCGGCGGCGGTTGTGATAGCGGTGTTGGCATATTTCGCATAA

Protein sequence

MATTRPRTAVNPSGFTTSSSLPKLKKEMKTKLIFYCSNFLVLILAYFNQQHVKVKVEKEAGTVVVTGDRNVGNNRLLILNKTYPIPRNSVIDRISHTLRDGVLTITMPKQTAESATPPTTTPLPKESEQSTPEKGREETPLEKSALPEMNGEIKEPEAAALPKDDSSSSKDKGKSAELQKQASAKANEETPAAAAERGQVQGDSGKAETTLDRKISSPDQKKPTEKKEIENQNPEKGRESKTEEVDKNVGTAKIDAVTPSPRTTRVGKLPGGFTVQRMQLLTTVSLSAAVVIAVLAYFA

Homology

[Close]

BLAST of CmoCh04G015280 vs. ExPASy TrEMBL
Match: A0A6J1GZF3 (uncharacterized protein LOC111458627 OS=Cucurbita moschata OX=3662 GN=LOC111458627 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 2.1e-89
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 107 MPKQTAESATPPTTTPLPKESEQSTPEKGREETPLEKSALPEMNGEIKEPEAAALPKDDS 166
           MPKQTAESATPPTTTPLPKESEQSTPEKGREETPLEKSALPEMNGEIKEPEAAALPKDDS
Sbjct: 1   MPKQTAESATPPTTTPLPKESEQSTPEKGREETPLEKSALPEMNGEIKEPEAAALPKDDS 60

Query: 167 SSSKDKGKSAELQKQASAKANEETPAAAAERGQVQGDSGKAETTLDRKISSPDQKKPTEK 226
           SSSKDKGKSAELQKQASAKANEETPAAAAERGQVQGDSGKAETTLDRKISSPDQKKPTEK
Sbjct: 61  SSSKDKGKSAELQKQASAKANEETPAAAAERGQVQGDSGKAETTLDRKISSPDQKKPTEK 120

Query: 227 KEIENQNPEKGRESKTEEVDKNVGTAKIDAVTPSPRTTRVGKLPGGFTVQRMQLLTTVSL 286
           KEIENQNPEKGRESKTEEVDKNVGTAKIDAVTPSPRTTRVGKLPGGFTVQRMQLLTTVSL
Sbjct: 121 KEIENQNPEKGRESKTEEVDKNVGTAKIDAVTPSPRTTRVGKLPGGFTVQRMQLLTTVSL 180

Query: 287 SAAVVIAVLAYFA 300
           SAAVVIAVLAYFA
Sbjct: 181 SAAVVIAVLAYFA 193

[Close]

BLAST of CmoCh04G015280 vs. ExPASy TrEMBL
Match: A0A6J1DAL2 (inactive protein RESTRICTED TEV MOVEMENT 2 OS=Momordica charantia OX=3673 GN=LOC111018709 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.3e-48
Identity = 159/320 (49.69%), Postives = 190/320 (59.38%), Query Frame = 0


Query: 1   MATTRPRT----AVNPSGFTT--SSSLPKLKKEMKTKLIFYCSNFLVLILAYFNQQHVKV 60
           M T RPRT    A+    F        PK++++ +T+     ++ L L L  F++Q  K 
Sbjct: 1   MTTLRPRTGGLDALRRQSFRAYYEPFTPKVEEKEETE-----AHILQLELTDFDKQQFKF 60

Query: 61  KVEKEAGTVVVTGDRNVGNNRLLILNKTYPIPRNSVIDRISHTLRDGVLTITMPKQ---- 120
           +V++   TV VTG RN GNN+ L L+KTYPIP N +ID+I      G+LTITMPKQ    
Sbjct: 61  RVDEGTRTVAVTGTRNAGNNKWLKLDKTYPIPENCLIDKIDDKFEGGILTITMPKQITGA 120

Query: 121 ---TAESATPPTTTPLPKESEQSTPEKGREETPLEKSALPEMNGEIKEPEAAALPKDDSS 180
               A +A      P PKE EQ TP     E   E +A PE   E K PE  ALPKDDS+
Sbjct: 121 ETAAAAAAETAVAAPPPKEPEQPTP-----EISPETAATPETKTETKAPE-EALPKDDSN 180

Query: 181 SSK----DKGKSAELQKQASAKANEETP---AAAAERGQVQGDSGKAETT-LDRKISSPD 240
           S K     KGKSAELQKQASA A EE P   AAAAE+G  QGDSG+ +TT  D KI SPD
Sbjct: 181 SVKPADDGKGKSAELQKQASAGAKEEAPPQGAAAAEKGPAQGDSGEPKTTSQDEKIGSPD 240

Query: 241 QKKPTEKKEIENQNPEKGRESKTEEVDKNVGTAKIDAVTPSPRTTRVGKLPGGFTVQRMQ 300
           + KPTEK+EIENQNPE+G+ESKTEEV KN    K+    PSP  T   K   G TV RM 
Sbjct: 241 E-KPTEKREIENQNPEQGKESKTEEVVKNQEERKVGTGAPSPTGTTAAKFARGVTVGRMP 300

[Close]

BLAST of CmoCh04G015280 vs. ExPASy TrEMBL
Match: A0A6J1G164 (proteoglycan 4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449725 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.2e-46
Identity = 163/349 (46.70%), Postives = 190/349 (54.44%), Query Frame = 0


Query: 1   MATTRPRTAVNPSGFTTSSSLPKLKKEMKTKLIFYCSN---FLVLILAYFNQQHVKVKVE 60
           MAT RPRTA    G     SL    +     ++    N    L L L  FN+QHVKVKVE
Sbjct: 1   MATGRPRTA--GLGALRRQSLRAYNEPFTPNVVEKDENEAHILRLELPDFNEQHVKVKVE 60

Query: 61  KEAGTVVVTGDRNVGNNRLLILNKTYPIPRNSVIDRISHTLRDGVLTITMPKQTA----- 120
           + A TVVVTGDR +  NRLLILNKTYPIP++  ID++ H L  G L ITMPKQTA     
Sbjct: 61  EGARTVVVTGDRLLATNRLLILNKTYPIPQDCSIDKVHHKLEAGFLIITMPKQTAPPAAP 120

Query: 121 ------------ESATPPTTTPLPKESEQSTPEKGREETPLEKSALP---------EMNG 180
                       E  TP   TP  KE EQ TPEKG EET    ++ P         E  G
Sbjct: 121 KDPEQKTPEKGSEETTPENATPPQKEPEQKTPEKGSEETSPGNASPPPKGPKQTSLEKGG 180

Query: 181 E----------IKEPEAAALPK--DDSSSSKDKGKSAELQKQASAKANEETPA------- 240
           E           KEPE     K  ++ S  +DKGKSAELQK+ S KA EE P        
Sbjct: 181 EETSPGNATPPPKEPEQTTRKKESEEISPEEDKGKSAELQKKGSVKAGEEAPTPAPTEVP 240

Query: 241 --AAAERGQVQGDSGKAETTLDRKISSPDQKKPTEKKEIENQNPEKGRESKTEEVDKNVG 300
             AAA+ G V+G+SGK +TT D KI +P+Q KPTEK   ENQNPEKG+ESKTE+V KN  
Sbjct: 241 PPAAAKNGPVRGESGKEKTTPDEKIKNPNQ-KPTEK---ENQNPEKGKESKTEKVGKNEK 300

[Close]

BLAST of CmoCh04G015280 vs. ExPASy TrEMBL
Match: A0A1S3BFR5 (neurofilament heavy polypeptide-like OS=Cucumis melo OX=3656 GN=LOC103489354 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.4e-44
Identity = 150/335 (44.78%), Postives = 179/335 (53.43%), Query Frame = 0


Query: 50  QHVKVKVEKEAGTVVVTGDRNVGNNRLLILNKTYPIPRNSVIDRISHTLRDGVLTITM-- 109
           +HV V VE+EA TVVVTGDR+V N RLLILNKT+PIP+N   D + H L+DGVLTIT+  
Sbjct: 48  EHVNVNVEREARTVVVTGDRHVSNTRLLILNKTFPIPQNCKSDGVEHKLQDGVLTITILK 107

Query: 110 ---------PKQTAESATPPTTTPLPKESE------------------------------ 169
                    P Q AES  PP T    KE +                              
Sbjct: 108 QITEPVTAPPLQAAESTAPPETKAENKEPDTAALTKSESVPDKAKEEISSANVSPPETKA 167

Query: 170 ------------QSTPEKGREETPLEKSALPEMNGEIKEPEAAALPKDDSSSS------- 229
                       +STP+K +EE     ++ PE   EIKEP AAALPKDDS+         
Sbjct: 168 KIKEPEAALTKSESTPDKAKEEISSANASPPETKAEIKEP-AAALPKDDSTPEKGREDIS 227

Query: 230 ----------------------KDKGKSAELQKQASAKANEE---TPA-AAAERGQVQGD 289
                                 KD+GKSA LQKQ SAKA +E   TPA   A +     +
Sbjct: 228 PGNVAPPESKEAIKEPKAAALPKDEGKSAALQKQGSAKATKEEAPTPAPLVASQPPADRN 287

Query: 290 SGKAETTLDRKISSPDQKKPTEKKEIENQNPEKGRESKTEEVDKNVGTAKIDAVTPSPRT 299
            GK ETTLD  I+S +     + KEIENQNPEKG+ESKTEEV KN  TA+I   TPSPR 
Sbjct: 288 YGKEETTLDHNINSQE-----KSKEIENQNPEKGKESKTEEVRKNEETAEIGTGTPSPRG 347

[Close]

BLAST of CmoCh04G015280 vs. ExPASy TrEMBL
Match: A0A6J1HU50 (proteoglycan 4 OS=Cucurbita maxima OX=3661 GN=LOC111467490 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 7.7e-44
Identity = 167/379 (44.06%), Postives = 193/379 (50.92%), Query Frame = 0


Query: 1   MATTRPRTAVNPSGFTTSSSLPKLKKEMKTKLIFYCSN---FLVLILAYFNQQHVKVKVE 60
           MAT RPR+A    G     SL    +     ++    N    L L L  FN+QHVKVKVE
Sbjct: 1   MATGRPRSA--GLGALRRQSLRAYNEPFTPNVVERDENEAHILQLQLPDFNEQHVKVKVE 60

Query: 61  KEAGTVVVTGDRNVGNNRLLILNKTYPIPRNSVIDRISHTLRDGVLTITMPKQTA----- 120
           + A TVVVTGDR + NNRLLIL+KTYPIP++  ID++ H L  G LTITMPKQTA     
Sbjct: 61  EGARTVVVTGDRLLANNRLLILDKTYPIPQDCPIDKVHHKLEAGYLTITMPKQTAPPEAV 120

Query: 121 -----------------ESATPPTTTPLPKESEQSTPEKGREE---------------TP 180
                            E  TP   TP  KE EQ+TPEKG EE               T 
Sbjct: 121 ATAAPKDPEQTTPEKGSEETTPENATPPQKEPEQNTPEKGSEETSPENASPSQKEPEQTS 180

Query: 181 LEK--------SALPEMNG-----------EIKEPEAAALPKDD------------SSSS 240
           LEK        +A P   G           E     A  LPK+             S   
Sbjct: 181 LEKGSEETSPGNATPPPKGPKQTSVEKGSEETSPGNATPLPKEPEQTTPKKESEEISPEE 240

Query: 241 KDKGKSAELQKQASAKANEETPA---------AAAERGQVQGDSGKAETTLDRKISSPDQ 300
           +DKGKSAELQK+ S KA EE P          AAA+ G VQG+SGK +TT D KI +P+Q
Sbjct: 241 EDKGKSAELQKKGSVKAEEEAPTQAPTEVPPPAAAKNGPVQGESGKEKTTPDEKIKNPNQ 300

[Close]

BLAST of CmoCh04G015280 vs. NCBI nr
Match: XP_023551679.1 (inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.8 bits (1052), Expect = 2.0e-110
Identity = 253/321 (78.82%), Postives = 264/321 (82.24%), Query Frame = 0


Query: 1   MATTRPRTA-----------VNPSGFTTSSSLPKLKKEMKTKLIFYCSNFLVLILAYFNQ 60
           MATTRPRTA           V    FT     PK+++  + +     ++ L+L L  FNQ
Sbjct: 1   MATTRPRTAGLGVYRRQSQRVYNEPFT-----PKVEERDENE-----AHILLLELPDFNQ 60

Query: 61  QHVKVKVEKEAGTVVVTGDRNVGNNRLLILNKTYPIPRNSVIDRISHTLRDGVLTITMPK 120
           QHVKVKVEKEAGTVVVTG RNVGNNRLLILNKTYPIPRNSVIDRISHTL+DGVLTITMPK
Sbjct: 61  QHVKVKVEKEAGTVVVTGGRNVGNNRLLILNKTYPIPRNSVIDRISHTLQDGVLTITMPK 120

Query: 121 QTAESAT------PPTTTPLPKESEQSTPEKGREETPLEKSALPEMNGEIKEPEAAALPK 180
           QTAE AT      PPT TPLPKE EQSTPEKG+EETP  KSALPEMNGEIKEPEAAALPK
Sbjct: 121 QTAEPATPPAAAAPPTPTPLPKEPEQSTPEKGKEETPSAKSALPEMNGEIKEPEAAALPK 180

Query: 181 DDSSSSKDKGKSAELQKQASAKANEETP-----AAAAERGQVQGDSGKAETTLDRKISSP 240
           DDSSSS DKGKSAELQKQASAKANEETP     AAAAERGQVQGDSGKAETTLDRKISSP
Sbjct: 181 DDSSSSNDKGKSAELQKQASAKANEETPTPTPAAAAAERGQVQGDSGKAETTLDRKISSP 240

Query: 241 DQKKPTEKKEIENQNPEKGRESKTEEVDKNVGTAKIDAVTPSPRTTRVGKLPGGFTVQRM 300
            QKKPTEKKEIENQN EKGRESKTEE DKNVGTAKIDAVTPSPRTTRVGKL GG TV+RM
Sbjct: 241 YQKKPTEKKEIENQNLEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGSTVRRM 300

[Close]

BLAST of CmoCh04G015280 vs. NCBI nr
Match: KAG6601244.1 (Protein RESTRICTED TEV MOVEMENT 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 404.4 bits (1038), Expect = 8.3e-109
Identity = 247/316 (78.16%), Postives = 260/316 (82.28%), Query Frame = 0


Query: 1   MATTRPRTA-----------VNPSGFTTSSSLPKLKKEMKTKLIFYCSNFLVLILAYFNQ 60
           MATTRPRTA           V    FT     PK+++  + +     ++ L+L L  FNQ
Sbjct: 1   MATTRPRTAGLGVYRRQSQRVYNEPFT-----PKVEERDENE-----AHILLLKLPDFNQ 60

Query: 61  QHVKVKVEKEAGTVVVTGDRNVGNNRLLILNKTYPIPRNSVIDRISHTLRDGVLTITMPK 120
           QHVKVKVEKEAGTVVVTG RNVGNNRLLILNKTYPIPRNSVIDRISHTL+DGVLTITMPK
Sbjct: 61  QHVKVKVEKEAGTVVVTGGRNVGNNRLLILNKTYPIPRNSVIDRISHTLQDGVLTITMPK 120

Query: 121 QTAESAT------PPTTTPLPKESEQSTPEKGREETPLEKSALPEMNGEIKEPEAAALPK 180
           QTAE AT      PPT TPLPKE EQST EKG+EETP EKSALPEMNGEIKEPEAAALPK
Sbjct: 121 QTAEPATPPAAAAPPTPTPLPKEPEQSTSEKGKEETPSEKSALPEMNGEIKEPEAAALPK 180

Query: 181 DDSSSSKDKGKSAELQKQASAKANEETPAAAAERGQVQGDSGKAETTLDRKISSPDQKKP 240
           DDSS SKDKGKSAELQKQASAKANEETP   AERG VQGDSGKAETTL RKISSPDQKKP
Sbjct: 181 DDSSLSKDKGKSAELQKQASAKANEETPTPTAERGLVQGDSGKAETTLYRKISSPDQKKP 240

Query: 241 TEKKEIENQNPEKGRESKTEEVDKNVGTAKIDAVTPSPRTTRVGKLPGGFTVQRMQLLTT 300
           TEKK+IENQN EKGRESKTEE DKNVGTAKIDAVTP+PRTTRVGKL GG TV+RMQLLTT
Sbjct: 241 TEKKKIENQNLEKGRESKTEEADKNVGTAKIDAVTPTPRTTRVGKLAGGSTVRRMQLLTT 300

[Close]

BLAST of CmoCh04G015280 vs. NCBI nr
Match: KAG7032034.1 (Protein RESTRICTED TEV MOVEMENT 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 401.0 bits (1029), Expect = 9.1e-108
Identity = 250/323 (77.40%), Postives = 262/323 (81.11%), Query Frame = 0


Query: 1   MATTRPRTA-----------VNPSGFTTSSSLPKLKKEMKTKLIFYCSNFLVLILAYFNQ 60
           MATTRPRTA           V    FT     PK+++  + +     ++ L+L L  FNQ
Sbjct: 1   MATTRPRTAGLGVYRRQSQRVYNEPFT-----PKVEERDENE-----AHILLLKLPDFNQ 60

Query: 61  QHVKVKVEKEAGTVVVTGDRNVGNNRLLILNKTYPIPRNSVIDRISHTLRDGVLTITMPK 120
           QHVKVKVEKEAGTVVVTG RNVGNNRLLILNKTYPIPRNS+IDRISHTL+DGVLTITMPK
Sbjct: 61  QHVKVKVEKEAGTVVVTGGRNVGNNRLLILNKTYPIPRNSLIDRISHTLQDGVLTITMPK 120

Query: 121 QTAESAT------PPTTTPLPKESEQSTPEKGREETPLEKSALPEMNGEIKEPEAAALPK 180
           QTAE AT      PPT TPLPKE EQST EKG+EETP EKSALPEMNGEIKEPEAAALPK
Sbjct: 121 QTAEPATPPAAASPPTPTPLPKEPEQSTSEKGKEETPSEKSALPEMNGEIKEPEAAALPK 180

Query: 181 DDSSSSKDKGKSAELQKQASAKANEETP-------AAAAERGQVQGDSGKAETTLDRKIS 240
           DDSS SKDKGKSAELQKQASAKANEETP       AAAAERG VQGDSGKAETTL RKIS
Sbjct: 181 DDSSLSKDKGKSAELQKQASAKANEETPTPTPAAAAAAAERGLVQGDSGKAETTLYRKIS 240

Query: 241 SPDQKKPTEKKEIENQNPEKGRESKTEEVDKNVGTAKIDAVTPSPRTTRVGKLPGGFTVQ 300
           SPDQKKPTEKKEIENQN EKGRESKTEE DKNVGTAKIDAVTPSPRTT VGKL GG TV+
Sbjct: 241 SPDQKKPTEKKEIENQNLEKGRESKTEEADKNVGTAKIDAVTPSPRTTIVGKLAGGSTVR 300

[Close]

BLAST of CmoCh04G015280 vs. NCBI nr
Match: XP_022957158.1 (uncharacterized protein LOC111458627 [Cucurbita moschata])

HSP 1 Score: 339.0 bits (868), Expect = 4.3e-89
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 107 MPKQTAESATPPTTTPLPKESEQSTPEKGREETPLEKSALPEMNGEIKEPEAAALPKDDS 166
           MPKQTAESATPPTTTPLPKESEQSTPEKGREETPLEKSALPEMNGEIKEPEAAALPKDDS
Sbjct: 1   MPKQTAESATPPTTTPLPKESEQSTPEKGREETPLEKSALPEMNGEIKEPEAAALPKDDS 60

Query: 167 SSSKDKGKSAELQKQASAKANEETPAAAAERGQVQGDSGKAETTLDRKISSPDQKKPTEK 226
           SSSKDKGKSAELQKQASAKANEETPAAAAERGQVQGDSGKAETTLDRKISSPDQKKPTEK
Sbjct: 61  SSSKDKGKSAELQKQASAKANEETPAAAAERGQVQGDSGKAETTLDRKISSPDQKKPTEK 120

Query: 227 KEIENQNPEKGRESKTEEVDKNVGTAKIDAVTPSPRTTRVGKLPGGFTVQRMQLLTTVSL 286
           KEIENQNPEKGRESKTEEVDKNVGTAKIDAVTPSPRTTRVGKLPGGFTVQRMQLLTTVSL
Sbjct: 121 KEIENQNPEKGRESKTEEVDKNVGTAKIDAVTPSPRTTRVGKLPGGFTVQRMQLLTTVSL 180

Query: 287 SAAVVIAVLAYFA 300
           SAAVVIAVLAYFA
Sbjct: 181 SAAVVIAVLAYFA 193

[Close]

BLAST of CmoCh04G015280 vs. NCBI nr
Match: XP_038891748.1 (protein RESTRICTED TEV MOVEMENT 2-like [Benincasa hispida])

HSP 1 Score: 255.8 bits (652), Expect = 4.7e-64
Identity = 183/339 (53.98%), Postives = 207/339 (61.06%), Query Frame = 0


Query: 37  SNFLVLILAYFNQQHVKVKVEKEAGTVVVTGDRNVGNNRLLILNKTYPIPRNSVIDRISH 96
           ++ L L L  FN+ HVKVKVEKEAGTVVVTGDRN+GNNRLLIL+KTY IP+NS ID+I H
Sbjct: 38  AHILRLQLPEFNEHHVKVKVEKEAGTVVVTGDRNMGNNRLLILDKTYSIPQNSQIDKIEH 97

Query: 97  TLRDGVLTITMPKQ-----------------TAESATPPTT---------TPLPKESEQS 156
            L+DG+LTIT+PKQ                   E+A PP T           LPK    S
Sbjct: 98  KLQDGILTITIPKQITEPVTAPPLQAAESMAAPENAAPPETMAEINEPDAAALPK--ADS 157

Query: 157 TPEKGREETPLEKSALPEMNGEIKEPEAAALPKDDSSSSKDK------------------ 216
           TPEKGREE   E  ALPE   EIKEP+AAALPKDDSS  K K                  
Sbjct: 158 TPEKGREENSPENVALPEKKAEIKEPDAAALPKDDSSPEKGKEEISPEIAAPPETMAESK 217

Query: 217 ----------------------GKSAELQKQASAKANEE---TPA-------AAAERGQV 276
                                 GKSAELQKQ S KA +E   TPA       AAAE+  V
Sbjct: 218 EPKAAALPKDDSYSVKPTEKNNGKSAELQKQDSVKAAKEEAPTPAPLVAPQPAAAEKDPV 277

Query: 277 QGDSGKAETTLDRKISSPDQKKPTEKKEIENQNPEKGRESKTEEVDKNVGTAKIDAVTPS 300
           QGDSGKAETT D+KISSPDQ      +EIENQ+P+KG++SK+EEVDKN  TAKI   TPS
Sbjct: 278 QGDSGKAETTSDQKISSPDQ-----NREIENQDPKKGKDSKSEEVDKNEETAKIGTGTPS 337

The following BLAST results are available for this feature:

BLAST of CmoCh04G015280 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh04G015280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZF3	2.1e-89	100.00	uncharacterized protein LOC111458627 OS=Cucurbita moschata OX=3662 GN=LOC1114586...	[more]
A0A6J1DAL2	2.3e-48	49.69	inactive protein RESTRICTED TEV MOVEMENT 2 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1G164	2.2e-46	46.70	proteoglycan 4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449725 PE=3 SV=...	[more]
A0A1S3BFR5	3.4e-44	44.78	neurofilament heavy polypeptide-like OS=Cucumis melo OX=3656 GN=LOC103489354 PE=...	[more]
A0A6J1HU50	7.7e-44	44.06	proteoglycan 4 OS=Cucurbita maxima OX=3661 GN=LOC111467490 PE=3 SV=1	[more]

BLAST of CmoCh04G015280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551679.1	2.0e-110	78.82	inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6601244.1	8.3e-109	78.16	Protein RESTRICTED TEV MOVEMENT 2, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7032034.1	9.1e-108	77.40	Protein RESTRICTED TEV MOVEMENT 2, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022957158.1	4.3e-89	100.00	uncharacterized protein LOC111458627 [Cucurbita moschata]	[more]
XP_038891748.1	4.7e-64	53.98	protein RESTRICTED TEV MOVEMENT 2-like [Benincasa hispida]	[more]

BLAST of CmoCh04G015280 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 39..140 e-value: 2.3E-8 score: 35.6
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 40..113
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 45..115 e-value: 1.1E-4 score: 22.3
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 19..126 score: 11.374026
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..178
None	No IPR available	PANTHER	PTHR43670:SF5	PROTEIN RESTRICTED TEV MOVEMENT 2	coord: 44..246
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 38..109 e-value: 6.98276E-7 score: 44.4673
IPR045045	Small heat shock protein RTM2-like	PANTHER	PTHR43670	HEAT SHOCK PROTEIN 26	coord: 44..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G015280.1	CmoCh04G015280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane