CmoCh04G015110 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G015110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ribonuclease H2 subunit A-like isoform X2
Location	Cmo_Chr04: 7732704 .. 7734782 (-)
RNA-Seq Expression	CmoCh04G015110
Synteny	CmoCh04G015110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTGAGAACTTCATTTGATTTCCTTCCGATTGTCGAGTTTTTGCATATGAATTTGAAGGATCTATTTCTTTTTCAGTATGCAATCGGTTCGATCTCGGAGCCGATGATTTATGGACGCTTGTACTGCGGGTGTTTCTATTCGAAAGGAAACGCTGAAGAACAGAGAGAGGAACCGGCAATGTTTCTCTGGAGCCAATCCCCAAAGGAGCTTCGAGGCCTTGTAGAATGGATGACTGTCGATGAAGCCGGTCGAGTTCTTGTTTTAGGTTTTGCATTTCTTATTCAAATTTTCGCATCTCTCATTTCGTTTCGATCATCGTATCGAGGCACAAGACCTTGAGAATTTCTTTGTTTTTGATAATTTACCGCATTCGTTCTCAGGACCAGTAGCGTATGGATACTCGGACTGCTGTTGTTCCTATGTCAAAGCACTTCCGTCTTTGAATTTAGCAGGTTTATCTCGTCCACGAAATATGCCCCGTCTGATTCCTTTCTAATCGTTTCTCATATCTCATCATTGTTCGATTCGTTTCTTTTTTGAACTTTTGATGTTTGATTGCAGACTCAAAAACATTGAAAGAATAGAAGACATAGGAATTGTTTGAAAATTTGAAGGCTAACGAATCAATTGGATGGGCTGCTGATGTCAAAGATCCACGCGAGCTCTCGCATCCAAAACGCTAAATAAGTCGGTAGTTCAGAAATTCTTTAATTTTGCCTTCATACACATCCATTTTACTTTTAGAATTTTGACTATGTAGAAGATGGATCGTAGGCCGAATCTTTTCTCTTGAAGAATATTGGTATTAGATCACTCCGAGTTTAAGCTTACACGTTAGGGGAAGTTTACATTTCTTAAATACATTCTTAACATTCATTCCCTCGTGCATTGGTTCAAATATTACACAAAATAGAGAGGAAATAAACATGTTAGGAATTCATTGTTACACATATTAAATCACCAAAAGTATGAGCTTATATGCTAGGATACATAATACTGCCCCCAGCCTCTCTGTTCTTGTTAATATATGTACATCAAAGGGTGACTATGGCTTGAAGCTCTATAGTTTTTCTCCTGTCAAGTCCACGAATTAAGATACTAATTTAATGCATCATATCAAAATTCCCTTTCGAACTCTTTGTTTCTAAAGCTTTTGTCTTCATCAATCAATCAATTGAAGTAGGATAAACCAAAATGATCATGACAGAATCTCTTTTGGCTATTATCCACTTTGAATATCTAGCAAATGTAGAATTTTGTTGCATTTCCAATCAGAAATCATGTAATTGACGCAATTAAAAGGCTACTGTCTCTGTACAATACAACAGTTATCAAACAAAAAAAAGAGTTTATGAGGTTCTGTCTCTGTATATACAATCATTTGCAAGCCACTTATTATGCACTTTTCTTGATCTTAGCAGGAAAGAAAGATCCAACAAGAAAGCTGAAGCACACACCTCAATCAACAGATTTAACAATGTTCTTGTATGGAAGCAGCCTTGATATCAGAAAACTAAATGGAGATGAACAATGGCAGCCAAAACTGAAGCTACCAGAAGCCCCATGTTGTTTTCATAGTGATTTCCTGCATTGCGCGTTCGACCTTGGCGATGATGTGCTTGTGCCGAACCAGCGGCATAAACAGGGATTACGGCCGCACCTCCGCCTCCTGCTTGAGGTCTACCGCCACCACCATTTTCTCCGCCGCCGGCGGCACTTCCATGACCAATCCCTTGAGAAACGGTGATTGCCCTTGCACTGTATATGCTGCTAATCCGGTTAGTGACACCATCCTTGCCATGTTTTTCTGCATTAGTTTTCTGGTGGTAATTTGACTCTGCATACATATAGAAACTGGTTTAGGAATGGGGGTATAATGAATTTCATTTCTTAAAGCTTAACAAATGTGACCCTTTATTTCTTCGTAGGAATTTAGTGGTAAGTTTTCTTTTGGTGACCCTTTATTTCTTCGTGGGAAGTGTGTAGGAATATTCTATTCATGGCATGCACAAGTGAGGCACCAAAAATTCCCACTTTATAAGTTTCTAATCTTGTATTTGATTTAAATCCCAT

mRNA sequence

ATGAGTTTGAGAACTTCATTTGATTTCCTTCCGATTGTCGAGTTTTTGCATATGAATTTGAAGGATCTATTTCTTTTTCAGTATGCAATCGGTTCGATCTCGGAGCCGATGATTTATGGACGCTTGTACTGCGGGTGTTTCTATTCGAAAGGAAACGCTGAAGAACAGAGAGAGGAACCGGCAATGTTTCTCTGGAGCCAATCCCCAAAGGAGCTTCGAGGCCTTGTAGAATGGATGACTGTCGATGAAGCCGGTCGAGTTCTTGTTTTAGGACCAGTAGCGTATGGATACTCGGACTGCTGTTGTTCCTATGTCAAAGCACTTCCGTCTTTGAATTTAGCAGACTCAAAAACATTGAAAGAATAGAAGACATAGGAATTGTTTGAAAATTTGAAGGCTAACGAATCAATTGGATGGGCTGCTGATGTCAAAGATCCACGCGAGCTCTCGCATCCAAAACGCTAAATAACAGGAAAGAAAGATCCAACAAGAAAGCTGAAGCACACACCTCAATCAACAGATTTAACAATGTTCTTGTATGGAAGCAGCCTTGATATCAGAAAACTAAATGGAGATGAACAATGGCAGCCAAAACTGAAGCTACCAGAAGCCCCATGTTGTTTTCATAGTGATTTCCTGCATTGCGCGTTCGACCTTGGCGATGATGTGCTTGTGCCGAACCAGCGGCATAAACAGGGATTACGGCCGCACCTCCGCCTCCTGCTTGAGGTCTACCGCCACCACCATTTTCTCCGCCGCCGGCGGCACTTCCATGACCAATCCCTTGAGAAACGGTGATTGCCCTTGCACTGTATATGCTGCTAATCCGGTTAGTGACACCATCCTTGCCATGTTTTTCTGCATTAGTTTTCTGGTGGTAATTTGACTCTGCATACATATAGAAACTGGTTTAGGAATGGGGGTATAATGAATTTCATTTCTTAAAGCTTAACAAATGTGACCCTTTATTTCTTCGTAGGAATTTAGTGGTAAGTTTTCTTTTGGTGACCCTTTATTTCTTCGTGGGAAGTGTGTAGGAATATTCTATTCATGGCATGCACAAGTGAGGCACCAAAAATTCCCACTTTATAAGTTTCTAATCTTGTATTTGATTTAAATCCCAT

Coding sequence (CDS)

ATGAGTTTGAGAACTTCATTTGATTTCCTTCCGATTGTCGAGTTTTTGCATATGAATTTGAAGGATCTATTTCTTTTTCAGTATGCAATCGGTTCGATCTCGGAGCCGATGATTTATGGACGCTTGTACTGCGGGTGTTTCTATTCGAAAGGAAACGCTGAAGAACAGAGAGAGGAACCGGCAATGTTTCTCTGGAGCCAATCCCCAAAGGAGCTTCGAGGCCTTGTAGAATGGATGACTGTCGATGAAGCCGGTCGAGTTCTTGTTTTAGGACCAGTAGCGTATGGATACTCGGACTGCTGTTGTTCCTATGTCAAAGCACTTCCGTCTTTGAATTTAGCAGACTCAAAAACATTGAAAGAATAG

Protein sequence

MSLRTSFDFLPIVEFLHMNLKDLFLFQYAIGSISEPMIYGRLYCGCFYSKGNAEEQREEPAMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLKE

Homology

[Close]

BLAST of CmoCh04G015110 vs. ExPASy Swiss-Prot
Match: Q9SEZ6 (Ribonuclease H2 subunit A OS=Arabidopsis thaliana OX=3702 GN=At2g25100 PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 7.2e-06
Identity = 26/43 (60.47%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 79  MTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLKE 122
           M +DEAGR  VLGP+ YG   C  SY  +L SL+ ADSKTLKE
Sbjct: 17  MGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKE 59

[Close]

BLAST of CmoCh04G015110 vs. ExPASy TrEMBL
Match: A0A6J1H0A3 (uncharacterized protein LOC111458856 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458856 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.0e-64
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MSLRTSFDFLPIVEFLHMNLKDLFLFQYAIGSISEPMIYGRLYCGCFYSKGNAEEQREEP 60
           MSLRTSFDFLPIVEFLHMNLKDLFLFQYAIGSISEPMIYGRLYCGCFYSKGNAEEQREEP
Sbjct: 1   MSLRTSFDFLPIVEFLHMNLKDLFLFQYAIGSISEPMIYGRLYCGCFYSKGNAEEQREEP 60

Query: 61  AMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLK 120
           AMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLK
Sbjct: 61  AMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLK 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]

BLAST of CmoCh04G015110 vs. ExPASy TrEMBL
Match: A0A6J1JK96 (uncharacterized protein LOC111485320 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485320 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.5e-58
Identity = 113/121 (93.39%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MSLRTSFDFLPIVEFLHMNLKDLFLFQYAIGSISEPMIYGRLYCGCFYSKGNAEEQREEP 60
           M+LRTS DFLPIVEF HMNLKDLFLFQYAIGSISEPMIYGRLYCG FYSKGNAEE REEP
Sbjct: 1   MNLRTSSDFLPIVEFFHMNLKDLFLFQYAIGSISEPMIYGRLYCGRFYSKGNAEEPREEP 60

Query: 61  AMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLK 120
           AMFLWSQSP ELRGLV+WMTVDEAGRVLVLGPVAYGYSDC CSYVKALPSLNLADSKTLK
Sbjct: 61  AMFLWSQSPNELRGLVKWMTVDEAGRVLVLGPVAYGYSDCSCSYVKALPSLNLADSKTLK 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]

BLAST of CmoCh04G015110 vs. ExPASy TrEMBL
Match: A0A6J1H207 (ribonuclease H2 subunit A-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458856 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.9e-43
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 37  MIYGRLYCGCFYSKGNAEEQREEPAMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYG 96
           MIYGRLYCGCFYSKGNAEEQREEPAMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYG
Sbjct: 1   MIYGRLYCGCFYSKGNAEEQREEPAMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYG 60

Query: 97  YSDCCCSYVKALPSLNLADSKTLKE 122
           YSDCCCSYVKALPSLNLADSKTLKE
Sbjct: 61  YSDCCCSYVKALPSLNLADSKTLKE 85

[Close]

BLAST of CmoCh04G015110 vs. ExPASy TrEMBL
Match: A0A6J1JBZ7 (ribonuclease H2 subunit A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485320 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.1e-38
Identity = 80/85 (94.12%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 37  MIYGRLYCGCFYSKGNAEEQREEPAMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYG 96
           MIYGRLYCG FYSKGNAEE REEPAMFLWSQSP ELRGLV+WMTVDEAGRVLVLGPVAYG
Sbjct: 1   MIYGRLYCGRFYSKGNAEEPREEPAMFLWSQSPNELRGLVKWMTVDEAGRVLVLGPVAYG 60

Query: 97  YSDCCCSYVKALPSLNLADSKTLKE 122
           YSDC CSYVKALPSLNLADSKTLKE
Sbjct: 61  YSDCSCSYVKALPSLNLADSKTLKE 85

[Close]

BLAST of CmoCh04G015110 vs. ExPASy TrEMBL
Match: A0A068TUI8 (Ribonuclease OS=Coffea canephora OX=49390 GN=GSCOC_T00029634001 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-06
Identity = 34/65 (52.31%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 57  REEPAMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADS 116
           R E A+  W+  P         M +DEAGR  VLGP+ YG   C CSY KAL +LN ADS
Sbjct: 2   RSEAALPKWASKPC-------MMGIDEAGRGPVLGPMVYGCVYCACSYQKALSTLNFADS 59

Query: 117 KTLKE 122
           KTLKE
Sbjct: 62  KTLKE 59

[Close]

BLAST of CmoCh04G015110 vs. NCBI nr
Match: XP_022957463.1 (uncharacterized protein LOC111458856 isoform X1 [Cucurbita moschata])

HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MSLRTSFDFLPIVEFLHMNLKDLFLFQYAIGSISEPMIYGRLYCGCFYSKGNAEEQREEP 60
           MSLRTSFDFLPIVEFLHMNLKDLFLFQYAIGSISEPMIYGRLYCGCFYSKGNAEEQREEP
Sbjct: 1   MSLRTSFDFLPIVEFLHMNLKDLFLFQYAIGSISEPMIYGRLYCGCFYSKGNAEEQREEP 60

Query: 61  AMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLK 120
           AMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLK
Sbjct: 61  AMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLK 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]

BLAST of CmoCh04G015110 vs. NCBI nr
Match: KAG6601228.1 (Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240.0 bits (611), Expect = 1.1e-59
Identity = 118/121 (97.52%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MSLRTSFDFLPIVEFLHMNLKDLFLFQYAIGSISEPMIYGRLYCGCFYSKGNAEEQREEP 60
           MSLRTSFDFLPIVEFLHMNLKDLFLFQYAIGSISE MIYGRLYCG FYSKGNAEEQREEP
Sbjct: 1   MSLRTSFDFLPIVEFLHMNLKDLFLFQYAIGSISEQMIYGRLYCGRFYSKGNAEEQREEP 60

Query: 61  AMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLK 120
           AMFL SQSPKELRGLVEWMTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLK
Sbjct: 61  AMFLRSQSPKELRGLVEWMTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLK 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]

BLAST of CmoCh04G015110 vs. NCBI nr
Match: XP_022987954.1 (uncharacterized protein LOC111485320 isoform X1 [Cucurbita maxima])

HSP 1 Score: 233.0 bits (593), Expect = 1.3e-57
Identity = 113/121 (93.39%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MSLRTSFDFLPIVEFLHMNLKDLFLFQYAIGSISEPMIYGRLYCGCFYSKGNAEEQREEP 60
           M+LRTS DFLPIVEF HMNLKDLFLFQYAIGSISEPMIYGRLYCG FYSKGNAEE REEP
Sbjct: 1   MNLRTSSDFLPIVEFFHMNLKDLFLFQYAIGSISEPMIYGRLYCGRFYSKGNAEEPREEP 60

Query: 61  AMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLK 120
           AMFLWSQSP ELRGLV+WMTVDEAGRVLVLGPVAYGYSDC CSYVKALPSLNLADSKTLK
Sbjct: 61  AMFLWSQSPNELRGLVKWMTVDEAGRVLVLGPVAYGYSDCSCSYVKALPSLNLADSKTLK 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]

BLAST of CmoCh04G015110 vs. NCBI nr
Match: XP_022957464.1 (ribonuclease H2 subunit A-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 37  MIYGRLYCGCFYSKGNAEEQREEPAMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYG 96
           MIYGRLYCGCFYSKGNAEEQREEPAMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYG
Sbjct: 1   MIYGRLYCGCFYSKGNAEEQREEPAMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYG 60

Query: 97  YSDCCCSYVKALPSLNLADSKTLKE 122
           YSDCCCSYVKALPSLNLADSKTLKE
Sbjct: 61  YSDCCCSYVKALPSLNLADSKTLKE 85

[Close]

BLAST of CmoCh04G015110 vs. NCBI nr
Match: XP_022988037.1 (ribonuclease H2 subunit A-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 169.1 bits (427), Expect = 2.4e-38
Identity = 80/85 (94.12%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 37  MIYGRLYCGCFYSKGNAEEQREEPAMFLWSQSPKELRGLVEWMTVDEAGRVLVLGPVAYG 96
           MIYGRLYCG FYSKGNAEE REEPAMFLWSQSP ELRGLV+WMTVDEAGRVLVLGPVAYG
Sbjct: 1   MIYGRLYCGRFYSKGNAEEPREEPAMFLWSQSPNELRGLVKWMTVDEAGRVLVLGPVAYG 60

Query: 97  YSDCCCSYVKALPSLNLADSKTLKE 122
           YSDC CSYVKALPSLNLADSKTLKE
Sbjct: 61  YSDCSCSYVKALPSLNLADSKTLKE 85

[Close]

BLAST of CmoCh04G015110 vs. TAIR 10
Match: AT2G25100.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 5.1e-07
Identity = 26/43 (60.47%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 79  MTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLKE 122
           M +DEAGR  VLGP+ YG   C  SY  +L SL+ ADSKTLKE
Sbjct: 17  MGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKE 59

[Close]

BLAST of CmoCh04G015110 vs. TAIR 10
Match: AT2G25100.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 5.1e-07
Identity = 26/43 (60.47%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 79  MTVDEAGRVLVLGPVAYGYSDCCCSYVKALPSLNLADSKTLKE 122
           M +DEAGR  VLGP+ YG   C  SY  +L SL+ ADSKTLKE
Sbjct: 17  MGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKE 59

The following BLAST results are available for this feature:

BLAST of CmoCh04G015110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEZ6	7.2e-06	60.47	Ribonuclease H2 subunit A OS=Arabidopsis thaliana OX=3702 GN=At2g25100 PE=2 SV=2	[more]

BLAST of CmoCh04G015110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H0A3	6.0e-64	100.00	uncharacterized protein LOC111458856 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JK96	6.5e-58	93.39	uncharacterized protein LOC111485320 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H207	5.9e-43	100.00	ribonuclease H2 subunit A-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JBZ7	1.1e-38	94.12	ribonuclease H2 subunit A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A068TUI8	1.2e-06	52.31	Ribonuclease OS=Coffea canephora OX=49390 GN=GSCOC_T00029634001 PE=3 SV=1	[more]

BLAST of CmoCh04G015110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957463.1	1.2e-63	100.00	uncharacterized protein LOC111458856 isoform X1 [Cucurbita moschata]	[more]
KAG6601228.1	1.1e-59	97.52	Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022987954.1	1.3e-57	93.39	uncharacterized protein LOC111485320 isoform X1 [Cucurbita maxima]	[more]
XP_022957464.1	1.2e-42	100.00	ribonuclease H2 subunit A-like isoform X2 [Cucurbita moschata]	[more]
XP_022988037.1	2.4e-38	94.12	ribonuclease H2 subunit A-like isoform X2 [Cucurbita maxima]	[more]

BLAST of CmoCh04G015110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25100.1	5.1e-07	60.47	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G25100.2	5.1e-07	60.47	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..121
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 49..121 e-value: 9.7E-7 score: 30.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G015110.1	CmoCh04G015110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0016070	RNA metabolic process
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0043167	ion binding
molecular_function	GO:0003676	nucleic acid binding