CmoCh04G015080 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G015080
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionDUF2996 family protein
LocationCmo_Chr04: 7722412 .. 7726594 (-)
RNA-Seq ExpressionCmoCh04G015080
SyntenyCmoCh04G015080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAGTGGCAGAAATTGTTCCGATTAGCGCGAGTGGATCACAAAAATCCGCGCGCTTCGTCTTTGTAGCGCAGAATGAGAAGCATTTCCTTTGCCGTTGTTGTCAACTACCTTACACCAACGATTCTCATCTCACCGCTATGAACCTCTAATCTTCACTATCAAACTCTTCAAAACTGTACTCAAAGTTCCTGCCCTGTGATCTTCTCTGCAAGTTTAATCCCTCTCCTCAGTAGCGTTTTAGATGGCAATGATTCTCAAAGGAGGAGGCGGAATTGGAGTTTCAACTGCTACTTACTTTCCTCAGAATTCCAAACCTTCCCCAGTATTCTCGGTTCACACGGTATGTTTACTCGTTTTGTTCTTATTCCGATTCTGATTTCATTTCTGGTTCTTATTCTGTTATTCTTGGTTTGATTCTGCTATGAATAGACGTACAATTTATTCCTGACTTGATTGCGCTTTAACTGTTTTACCTTTTTCAAGTTTCGTACTCTCTTTTATGGCGTAGTTCTTAGAAACTCGTAGTCGATTTTACTTGGTTATATTCTTCTGACTTAGATGTGAAGTGCTCGAGTAAAAGGAGGAAAAGAGGAAAACGAAGCTTAAAATTCTCCCTAGAATCAACGTGTTTGTTAGTTTTGGTTCCAAAACTACGGTATCCACCGATTGATTAGCAACATGATTTGGAATTGTAATCCGAAAATAAACCAGGTCCCACTCCAGAAGAGAAAAATACTATTAGGACTTTGAAATTATTTGTACTTAAAAACTATTTCAGCATTTGAATGTGTTATATCATCATTGAACACTAAAGGTTAAGTTCCAATAAATTTAGTTTTTAATTCATGTTCTTATTATTTCTTTTTACATGTAGGCTTGGATATTGGCACGAAGTGAAACAAATGGTTACCGATAGTAGTGGTAGATGAAATGACTTTGTAAGGGTTCGAAATATAGGATCTATTACCCTAATATCATCATGATTAATCATAATTGAACCCGAAAATTAAAGTTGGTGAATTCTTAACAGTGTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTGTTTTGTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTTCTCTCCTGTTTCCATTGGGGGCAGAGTCATGAACAAGATAGAGATAGATCTGGGGAGGGAAGATTCAGTTAGTTGAGAAAAAATGTATGAGTTCAAAATGGATCGAGGAAGGTATCCATACCTTCAAATCACTCCACTAGATGGAAAGATGATGCTTTAGGTAGCGTTCATATGTACATAGATTAAGAATATTACATTATAAATATAGAAGAAGAGATTCTGTAATAGCCCAAGCTCACCGCTAGCCTATATTGTCCTCTTTGGGCTTTCCCTTTTGGACTTCCTCTCAAGACTTTTAAAACGCGTATGTTAGGGAGAGGTTTCCACACCCTTATAAGGGATGCTTCGTTCCCCTCAACCGACTTGGGATCTCACAATCCACCCCCCTTGGGGGTCCAGTGTCCTCGCTGGCACACCGCTCGGTGTCTGGCTCTTATACCATTTGTAACAACCCAAACTCACCGCAAATAGATATTGTCCTCTTTCGGTTTGCCCTTTGTTCTTCCCCTCAAAGTTTTAAAACACATTTGCTAGGGAGAGGTTTCCACACCCTTATAAAAGTGTTTTGTTCCCTTCTTCAACCGATGTGGGATCTCACAAATTCAGACCTAAGATATGAGACACTTATGCCTAAGTTCCAAACCACCTTGCTCGAGTCGGTGATGTGGTAGGTGGGTAGTGGCAAAAAACGTCAGAATGGTTGAGCCATAGTTTCTGCCTTAGGTTTGTTTTTAGAAATAAGTTTTTCCTACATTCACGATTTTGTTGCATGCCTGCCATACCAGAAAGAACACATGAGTTCAAGCCAGTACTTTTTAGTATACAAAAATCTACTAGAGCAGTGGAGTGATAGTATCACCTAGCGTTTATGGTTATAGTTGGAATCTATCATCTCTATTCATCTTTACAGATTGCATCCTGCTCTTCATTTCATAAATTTAGTTTACCAATAAGAGTGGATATAACTGAAGTTGAATTGTGCAGGTACATAAGCTTCCAGCTGAACGCAGAGTCATATGCTGCTCTACCTTGCAGGAATCATCTACCCCAACAGGTTAGTTGCTGGCAATTCTTTCAAAGTACACCACTGAAAGATTGACAGAGTGACCCCTGAGTAGCATGGATACTAATAGACATGACACCGACACAATGACCCGTCATTTTTGAAAAGCTAGATCGTGGATACGAAAAAAACGTGTTTATTGATATATATCATTTTTATACCAAAAGGAAATTTAACGTCAAAAGTTTTTTTCATTTATATGCTAAAAAAAACTATTCGAATGTATTTCACGATCAAAACTTATTATTTTCATTATAATTAACAAGTGTTAATACGTGTCTAACAAATGTTCGGACGATTGTCTATTGCTAACAAGTATACAGTATGTGTCCAACAATTATTGCAGCGTCCAAGTGCGCTAGCCAAACTAAAATGTTTATGCTTGTTAGGTGACCCTAATAAATTTTGTCTATCTTTCTTCTGTTTCAAATGAAAAGGGTCAGGCTCGGGTTTATTTGTTTCTTTCTGCTGCGTTTATTAATACTCAATTTATGGCATCCGCTAAAGTAGAAGTCTTTTCTATCAGTTTCTGCGGAGCCAAAGGAGATAAAGGCAGTTCAGAAGGAAGCTCCAGCAAAGCCCAAACCGCCAGCAAAAGCGCCAGTGAAGCCACTGCCTCAAATGATGGAGGAAGATGTCATACCTTCACTCAAAGCGATACTTGAAGCACAAGCCGATGTTGCTGATATCGAGTTATCCTTCCAAGATGACAGAGTTAGTTTCTTCCATCCCAATTAACGTTCACTAATAAACTCTTAGCTTCAGCTCATTGAATTTGGGTTGACAATGGCAGTTGGATGGTTCATTCTCGAAAAATGGAGTTCCCTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTACTTAATTCTTCTCAGAGAACGTAACTATTTTACCATTGTCATCACCCTTTAGCTTCTGGTTTTCACTGCCTTTCGTTAAATACAAAAATGGTGAACGTAACAAATTAGGACAATATCTACTAGTGATGAACATATCAAAAGCTATCCTTCAAGTAGAAATCTATTACATTGCTAGATGAAAGTTGAGATTTAGAATAGCATAGCGGTGAGCTTGGATAAAAATTAGCACGCGAGCATTGCTACACCTATCTAGGTCTAAATTTCCATTTATAGTTTTAACGGATTTCTACATCAAGGGATAGTTTTCAAACATTTATAAAATGTGTTTAGAAATATTGCAACTTATGAGTAAAAAAAAAAAGAGAAAAAAACATCTAAACTCAATGTCTAATCTTGTTGGAACAGGTCCAAAAGGGTTTTCACTATCCTCATATGGCAATGGAGGAAGCTCTGTTGAGCCATTTCTGGTGGATGAGAAGAAAGTTACAGCAAAGCTTTTAGTTTTTTGGATTGAGAAACGTTTGGCTGCACAAGGAATTATTCCTGTCTGGAAAGACTAATCAACAAAATTATTATTCTTTTCCTTTTTTTTCTTTTTTCGGTGGGGGGCTTCCTTGCAAATGATGTATAGCATAATTCTCCATTCTATTGCATTGCTCCAACAATGTCAACTGTTCCTATGAAATGTATCAACTTTTTAGTCCACAACATAATCTCCTCCCTTGTTTACTATTTAGGAGCTTAATGTTACCTTGCATGACAAAATGTAAATTCTACATCATCTTCAATTGCCATTACGGCACGTGCATGTACTTCTTATCTTGAAGTTATTAGTTCGAATCTCTATACCCCACTTTGGT

mRNA sequence

GCAGTGGCAGAAATTGTTCCGATTAGCGCGAGTGGATCACAAAAATCCGCGCGCTTCGTCTTTGTAGCGCAGAATGAGAAGCATTTCCTTTGCCGTTGTTGTCAACTACCTTACACCAACGATTCTCATCTCACCGCTATGAACCTCTAATCTTCACTATCAAACTCTTCAAAACTGTACTCAAAGTTCCTGCCCTGTGATCTTCTCTGCAAGTTTAATCCCTCTCCTCAGTAGCGTTTTAGATGGCAATGATTCTCAAAGGAGGAGGCGGAATTGGAGTTTCAACTGCTACTTACTTTCCTCAGAATTCCAAACCTTCCCCAGTATTCTCGGTTCACACGGTACATAAGCTTCCAGCTGAACGCAGAGTCATATGCTGCTCTACCTTGCAGGAATCATCTACCCCAACAGTTTCTGCGGAGCCAAAGGAGATAAAGGCAGTTCAGAAGGAAGCTCCAGCAAAGCCCAAACCGCCAGCAAAAGCGCCAGTGAAGCCACTGCCTCAAATGATGGAGGAAGATGTCATACCTTCACTCAAAGCGATACTTGAAGCACAAGCCGATGTTGCTGATATCGAGTTATCCTTCCAAGATGACAGATTGGATGGTTCATTCTCGAAAAATGGAGTTCCCTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTCCAAAAGGGTTTTCACTATCCTCATATGGCAATGGAGGAAGCTCTGTTGAGCCATTTCTGGTGGATGAGAAGAAAGTTACAGCAAAGCTTTTAGTTTTTTGGATTGAGAAACGTTTGGCTGCACAAGGAATTATTCCTGTCTGGAAAGACTAATCAACAAAATTATTATTCTTTTCCTTTTTTTTCTTTTTTCGGTGGGGGGCTTCCTTGCAAATGATGTATAGCATAATTCTCCATTCTATTGCATTGCTCCAACAATGTCAACTGTTCCTATGAAATGTATCAACTTTTTAGTCCACAACATAATCTCCTCCCTTGTTTACTATTTAGGAGCTTAATGTTACCTTGCATGACAAAATGTAAATTCTACATCATCTTCAATTGCCATTACGGCACGTGCATGTACTTCTTATCTTGAAGTTATTAGTTCGAATCTCTATACCCCACTTTGGT

Coding sequence (CDS)

ATGGCAATGATTCTCAAAGGAGGAGGCGGAATTGGAGTTTCAACTGCTACTTACTTTCCTCAGAATTCCAAACCTTCCCCAGTATTCTCGGTTCACACGGTACATAAGCTTCCAGCTGAACGCAGAGTCATATGCTGCTCTACCTTGCAGGAATCATCTACCCCAACAGTTTCTGCGGAGCCAAAGGAGATAAAGGCAGTTCAGAAGGAAGCTCCAGCAAAGCCCAAACCGCCAGCAAAAGCGCCAGTGAAGCCACTGCCTCAAATGATGGAGGAAGATGTCATACCTTCACTCAAAGCGATACTTGAAGCACAAGCCGATGTTGCTGATATCGAGTTATCCTTCCAAGATGACAGATTGGATGGTTCATTCTCGAAAAATGGAGTTCCCTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTCCAAAAGGGTTTTCACTATCCTCATATGGCAATGGAGGAAGCTCTGTTGAGCCATTTCTGGTGGATGAGAAGAAAGTTACAGCAAAGCTTTTAGTTTTTTGGATTGAGAAACGTTTGGCTGCACAAGGAATTATTCCTGTCTGGAAAGACTAA

Protein sequence

MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAEPKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRLDGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEKRLAAQGIIPVWKD
Homology
[Close]
BLAST of CmoCh04G015080 vs. ExPASy TrEMBL
Match: A0A6J1GX25 (uncharacterized protein LOC111458230 OS=Cucurbita moschata OX=3662 GN=LOC111458230 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.1e-102
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 

Query: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE 60
           MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE 60

Query: 61  PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL 120
           PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL
Sbjct: 61  PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL 120

Query: 121 DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK 180
           DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK
Sbjct: 121 DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK 180

Query: 181 RLAAQGIIPVWKD 194
           RLAAQGIIPVWKD
Sbjct: 181 RLAAQGIIPVWKD 193

[Close]
BLAST of CmoCh04G015080 vs. ExPASy TrEMBL
Match: A0A6J1JE31 (uncharacterized protein LOC111484155 OS=Cucurbita maxima OX=3661 GN=LOC111484155 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.4e-101
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0 

Query: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE 60
           MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKL AERRVICCSTLQESSTPTVSAE
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLLAERRVICCSTLQESSTPTVSAE 60

Query: 61  PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL 120
           PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL
Sbjct: 61  PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL 120

Query: 121 DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK 180
           DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK
Sbjct: 121 DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK 180

Query: 181 RLAAQGIIPVWKD 194
           RLAAQGIIPVWKD
Sbjct: 181 RLAAQGIIPVWKD 193

[Close]
BLAST of CmoCh04G015080 vs. ExPASy TrEMBL
Match: A0A0A0KUS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G614630 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.9e-89
Identity = 170/194 (87.63%), Postives = 182/194 (93.81%), Query Frame = 0 

Query: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVH-TVHKLPAERRVICCSTLQESSTPTVSA 60
           MAMILKGG GIGVSTATYFP N KPSP+FS+H  VHKL AER+VICCSTLQESSTPTV+A
Sbjct: 1   MAMILKGGRGIGVSTATYFPHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVAA 60

Query: 61  EPKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDR 120
           EPKEIK V KEAPAK KPPAKAPVKPLP++M+E+VIPSLKAILEAQADV+D+ LSFQDDR
Sbjct: 61  EPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAILEAQADVSDVALSFQDDR 120

Query: 121 LDGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180
           LDGSF KNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKV+ KL+VFWIE
Sbjct: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKLIVFWIE 180

Query: 181 KRLAAQGIIPVWKD 194
           KRLAAQGIIPVWKD
Sbjct: 181 KRLAAQGIIPVWKD 194

[Close]
BLAST of CmoCh04G015080 vs. ExPASy TrEMBL
Match: A0A6J1D8K8 (uncharacterized protein LOC111018617 OS=Momordica charantia OX=3673 GN=LOC111018617 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.1e-89
Identity = 169/193 (87.56%), Postives = 182/193 (94.30%), Query Frame = 0 

Query: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE 60
           MAMILKGGGGIGV TAT F Q SKPSP+FS+HT++KL AER+VICCSTLQESSTPTV+AE
Sbjct: 1   MAMILKGGGGIGVPTATCFSQISKPSPIFSIHTIYKLAAERKVICCSTLQESSTPTVAAE 60

Query: 61  PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL 120
           PKE+K V+KEAPAK KPPAKAPVK LP++MEEDVIPSLKAILEAQADV+DIELSFQDDRL
Sbjct: 61  PKEMKVVEKEAPAKTKPPAKAPVKALPELMEEDVIPSLKAILEAQADVSDIELSFQDDRL 120

Query: 121 DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK 180
           DGSF KNGVPYSFWAFFPNGLTGPKGFSLSSYG GGSSVEPFLVDEKK+TAK +VFWIEK
Sbjct: 121 DGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGYGGSSVEPFLVDEKKITAKHVVFWIEK 180

Query: 181 RLAAQGIIPVWKD 194
           RLAAQGIIPVWKD
Sbjct: 181 RLAAQGIIPVWKD 193

[Close]
BLAST of CmoCh04G015080 vs. ExPASy TrEMBL
Match: A0A5A7SZ21 (DUF2996 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001950 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.8e-87
Identity = 171/195 (87.69%), Postives = 182/195 (93.33%), Query Frame = 0 

Query: 1   MAMILKGGGGIGVSTATYFP-QNSKPSPVFSVH-TVHKLPAERRVICCSTLQESSTPTVS 60
           MAMILKGG G+GVSTATYFP  N KPSP+FS+H  VHKL AER+VICCSTLQESSTPTV+
Sbjct: 1   MAMILKGGRGLGVSTATYFPAHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVA 60

Query: 61  AEPKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDD 120
           AEPKEIK V KEAPAK KPPAKA VKPLP++MEE+VIPSLKAILEAQADV DIELSFQDD
Sbjct: 61  AEPKEIKTVPKEAPAKAKPPAKAAVKPLPELMEEEVIPSLKAILEAQADVYDIELSFQDD 120

Query: 121 RLDGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWI 180
           RLDGSF K+GVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKV+AKL+VFWI
Sbjct: 121 RLDGSFLKDGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSAKLIVFWI 180

Query: 181 EKRLAAQGIIPVWKD 194
           EKRLAAQGIIPVWKD
Sbjct: 181 EKRLAAQGIIPVWKD 195

[Close]
BLAST of CmoCh04G015080 vs. NCBI nr
Match: XP_022956513.1 (uncharacterized protein LOC111458230 [Cucurbita moschata] >XP_023539763.1 uncharacterized protein LOC111800345 [Cucurbita pepo subsp. pepo] >KAG7032019.1 hypothetical protein SDJN02_06061 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.9 bits (977), Expect = 6.3e-102
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 

Query: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE 60
           MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE 60

Query: 61  PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL 120
           PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL
Sbjct: 61  PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL 120

Query: 121 DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK 180
           DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK
Sbjct: 121 DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK 180

Query: 181 RLAAQGIIPVWKD 194
           RLAAQGIIPVWKD
Sbjct: 181 RLAAQGIIPVWKD 193

[Close]
BLAST of CmoCh04G015080 vs. NCBI nr
Match: XP_022986445.1 (uncharacterized protein LOC111484155 [Cucurbita maxima] >XP_022986526.1 uncharacterized protein LOC111484155 [Cucurbita maxima])

HSP 1 Score: 377.1 bits (967), Expect = 9.1e-101
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0 

Query: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE 60
           MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKL AERRVICCSTLQESSTPTVSAE
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLLAERRVICCSTLQESSTPTVSAE 60

Query: 61  PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL 120
           PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL
Sbjct: 61  PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL 120

Query: 121 DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK 180
           DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK
Sbjct: 121 DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK 180

Query: 181 RLAAQGIIPVWKD 194
           RLAAQGIIPVWKD
Sbjct: 181 RLAAQGIIPVWKD 193

[Close]
BLAST of CmoCh04G015080 vs. NCBI nr
Match: KAG6601225.1 (Replication protein A 14 kDa subunit B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 370.5 bits (950), Expect = 8.5e-99
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 

Query: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE 60
           MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE 60

Query: 61  PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL 120
           PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL
Sbjct: 61  PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL 120

Query: 121 DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK 180
           DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK
Sbjct: 121 DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK 180

Query: 181 RLAAQGIIP 190
           RLAAQGIIP
Sbjct: 181 RLAAQGIIP 189

[Close]
BLAST of CmoCh04G015080 vs. NCBI nr
Match: KAG6601223.1 (Replication protein A 14 kDa subunit B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 370.5 bits (950), Expect = 8.5e-99
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 

Query: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE 60
           MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE 60

Query: 61  PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL 120
           PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL
Sbjct: 61  PKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRL 120

Query: 121 DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK 180
           DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK
Sbjct: 121 DGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEK 180

Query: 181 RLAAQGIIP 190
           RLAAQGIIP
Sbjct: 181 RLAAQGIIP 189

[Close]
BLAST of CmoCh04G015080 vs. NCBI nr
Match: XP_038891519.1 (uncharacterized protein LOC120080914 isoform X1 [Benincasa hispida])

HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90
Identity = 174/194 (89.69%), Postives = 185/194 (95.36%), Query Frame = 0 

Query: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHT-VHKLPAERRVICCSTLQESSTPTVSA 60
           MAMILKGG GIGVSTATYFP NSKPSPVFS+HT VHKL AER+V+CCSTLQESSTPTV+A
Sbjct: 1   MAMILKGGRGIGVSTATYFPHNSKPSPVFSLHTMVHKLAAERKVVCCSTLQESSTPTVAA 60

Query: 61  EPKEIKAVQKEAPAKPKPPAKAPVKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDR 120
           EPKEIK V KEAPAK KPPAKAPVKPLP++MEEDVIPSLKAILEAQADV+DI LSFQD+R
Sbjct: 61  EPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLKAILEAQADVSDIGLSFQDNR 120

Query: 121 LDGSFSKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIE 180
           LDGSF KNGVPY+FWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKL+VFWIE
Sbjct: 121 LDGSFLKNGVPYTFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLIVFWIE 180

Query: 181 KRLAAQGIIPVWKD 194
           KRLAAQGIIPVWK+
Sbjct: 181 KRLAAQGIIPVWKN 194

[Close]
BLAST of CmoCh04G015080 vs. TAIR 10
Match: AT2G04039.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). )

HSP 1 Score: 177.6 bits (449), Expect = 9.9e-45
Identity = 106/198 (53.54%), Postives = 133/198 (67.17%), Query Frame = 0 

Query: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE 60
           MA I  G  G+  S  +        S +    T+     +  ++ C+ LQESST  V+ E
Sbjct: 1   MATIAGGSFGVPSSRISITTPTLSSSSLLPPLTLQSGTRKDNLLRCA-LQESSTSAVATE 60

Query: 61  PKEIKAVQKEAPA----KPKPPAKAP--VKPLPQMMEEDVIPSLKAILEAQADVADIELS 120
            K  +  ++   A    KPKP AKA    KPL QMMEEDVIP L+AILE+Q D++DI+LS
Sbjct: 61  KKNKEEGEESTVAVPAKKPKPAAKAAAVAKPLRQMMEEDVIPPLQAILESQDDISDIDLS 120

Query: 121 FQDDRLDGSFSKNGVPYSFWAFFPNG-LTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKL 180
           FQDD+L+G F K  +PYSFWAFFP G LTG KGFS+SS+G+G S+VEPFLVDE+K TA  
Sbjct: 121 FQDDKLEGFFLKKSIPYSFWAFFPTGNLTGAKGFSISSHGSGPSTVEPFLVDERKPTANH 180

Query: 181 LVFWIEKRLAAQGIIPVW 192
           +VFW+EKRLAAQGIIPVW
Sbjct: 181 VVFWVEKRLAAQGIIPVW 197

[Close]
BLAST of CmoCh04G015080 vs. TAIR 10
Match: AT2G04039.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 157 Blast hits to 157 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). )

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42
Identity = 87/121 (71.90%), Postives = 102/121 (84.30%), Query Frame = 0 

Query: 74  KPKPPAKAP--VKPLPQMMEEDVIPSLKAILEAQADVADIELSFQDDRLDGSFSKNGVPY 133
           KPKP AKA    KPL QMMEEDVIP L+AILE+Q D++DI+LSFQDD+L+G F K  +PY
Sbjct: 43  KPKPAAKAAAVAKPLRQMMEEDVIPPLQAILESQDDISDIDLSFQDDKLEGFFLKKSIPY 102

Query: 134 SFWAFFPNG-LTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEKRLAAQGIIPV 192
           SFWAFFP G LTG KGFS+SS+G+G S+VEPFLVDE+K TA  +VFW+EKRLAAQGIIPV
Sbjct: 103 SFWAFFPTGNLTGAKGFSISSHGSGPSTVEPFLVDERKPTANHVVFWVEKRLAAQGIIPV 162

[Close]
BLAST of CmoCh04G015080 vs. TAIR 10
Match: AT2G04039.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 103.6 bits (257), Expect = 1.8e-22
Identity = 80/197 (40.61%), Postives = 102/197 (51.78%), Query Frame = 0 

Query: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLPAERRVICCSTLQESSTPTVSAE 60
           MA I  G  G+  S  +        S +    T+     +  ++ C+ LQESST  V+ E
Sbjct: 1   MATIAGGSFGVPSSRISITTPTLSSSSLLPPLTLQSGTRKDNLLRCA-LQESSTSAVATE 60

Query: 61  PKEIKAVQKEAPA----KPKPPAKAP--VKPLPQMMEEDVIPSLKAILEAQADVADIELS 120
            K  +  ++   A    KPKP AKA    KPL QMMEEDVIP L+AILE+Q D++DI+LS
Sbjct: 61  KKNKEEGEESTVAVPAKKPKPAAKAAAVAKPLRQMMEEDVIPPLQAILESQDDISDIDLS 120

Query: 121 FQDDRLDGSFSKNGVPYSFWAFFPNG-LTG-PKGFSLSSYGNGGSSVEPFLVDEKKVTAK 180
           FQDD+L+G F K  +PYSFWAFFP G LTG  K F     G   +    FL         
Sbjct: 121 FQDDKLEGFFLKKSIPYSFWAFFPTGNLTGEQKDFQFPHTGQVRAPWNHFLSTRGNQLRT 180

Query: 181 LLVFWIEKRLAAQGIIP 190
            L F     L  +G  P
Sbjct: 181 TLCFGSRSVLLHKGSSP 196

The following BLAST results are available for this feature:
BLAST of CmoCh04G015080 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh04G015080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GX253.1e-102100.00uncharacterized protein LOC111458230 OS=Cucurbita moschata OX=3662 GN=LOC1114582... [more]
A0A6J1JE314.4e-10199.48uncharacterized protein LOC111484155 OS=Cucurbita maxima OX=3661 GN=LOC111484155... [more]
A0A0A0KUS03.9e-8987.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G614630 PE=4 SV=1[more]
A0A6J1D8K85.1e-8987.56uncharacterized protein LOC111018617 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A5A7SZ212.8e-8787.69DUF2996 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4... [more]
BLAST of CmoCh04G015080 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022956513.16.3e-102100.00uncharacterized protein LOC111458230 [Cucurbita moschata] >XP_023539763.1 unchar... [more]
XP_022986445.19.1e-10199.48uncharacterized protein LOC111484155 [Cucurbita maxima] >XP_022986526.1 uncharac... [more]
KAG6601225.18.5e-99100.00Replication protein A 14 kDa subunit B, partial [Cucurbita argyrosperma subsp. s... [more]
KAG6601223.18.5e-99100.00Replication protein A 14 kDa subunit B, partial [Cucurbita argyrosperma subsp. s... [more]
XP_038891519.11.5e-9089.69uncharacterized protein LOC120080914 isoform X1 [Benincasa hispida][more]
BLAST of CmoCh04G015080 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G04039.19.9e-4553.54unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloropla... [more]
AT2G04039.22.1e-4271.90unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloropla... [more]
AT2G04039.31.8e-2240.61unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloropla... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021374Protein of unknown function DUF2996PFAMPF11210DUF2996coord: 84..185
e-value: 3.2E-13
score: 50.2
IPR021374Protein of unknown function DUF2996PANTHERPTHR36341DUF2996 FAMILY PROTEINcoord: 15..193

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G015080.1CmoCh04G015080.1mRNA