CmoCh04G014040 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G014040
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Two-component response regulator like
Location	Cmo_Chr04: 7166482 .. 7167765 (+)
RNA-Seq Expression	CmoCh04G014040
Synteny	CmoCh04G014040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCAATTCCCATGGCCCTTGTCTCTTCTAATGCTCAATTCCATGTCTTGGCTGTCGATGACAGCCTTGTAGACAGGAAGCTGATTGAAAGGCTGCTCAAAACTTCCTCCTTCAATGGTACTCTGCCATTGAACCTTCTTCTCTCTCTTTCTCACTCTCTCTAGGGTTCTAAGAATGGCTTGAATTTAGGCTCTAAACAGTTGGTTTGGTTTTTTTCTTTTTACAGTTACGGCTGTGGATTCTGGAAGCAAGGCTTTGGAGCTTCTGGGTTTGGTTAGAGAGAGAAATGGAAGCATCCATTCTCCTTATTCCCCTGAAAATCATCATCATCAACATCAAGTTAAGGATTTCCAATTTGGATGTTTGTTTGTTGTTCTTTTGGGCATTGTTTTGATTTGTTTTGCTTTGATTGCAGGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTAAGAAAGATCAAGGCAAGTTTCTTCTTCTTTTCAAGACATAAGGCTTAGTTTTCTTACTTTCCAACCAATTTCAATCTGAAAAGGAAAATCCTATCTGGTTTTGCAGGAATCTGACTCACTTAAAGACATACCTGTCGTGATTATGTCCTCTGAGAATGTTCCAGCAAGAATCAACAGGTGAGGAGGGAAACAGCTAGAACAGGAACCATTTTGTTTCCAAGCAAATCCAAATCTGAAATGATAAACAACCAGTAAATTCATGTCAATCATGTCAATCTGAATTGGGTTTTGGTTATTTGTTTTGAATCAGATGTTTGGAAGAAGGAGCCGAGGAGTTTTTGCTGAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATATGCAGAGGAAAAGCCAAGGAAATGGATTGCAACAATCTCAAGAGAAAGGAAATGGAACAGAGTCAATCATCTGAGAGAACAAGAGCAAAATACAATGAACCTCTCTAAATCTAAACTTCCGGCTTACATTATCAGTTCTTAGAGTTAAATGACCATTATTATGTACTTTCTAATGTTACAAGAGTGAATCATTTTGAGTGTCTGAATGTACAAAGTTGATGAAACTTCGGATTTTTAGGCTTAGAAATCTCATTATTTTGTAGTTTAGATATCTGTACTCATGATTCGATCTCTACCAAAACAAACAAACAAAATAAAGACATACAATCTTGTCTTTTAATTTTCCAATTTTGGCACTGAGCCAC

mRNA sequence

CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCAATTCCCATGGCCCTTGTCTCTTCTAATGCTCAATTCCATGTCTTGGCTGTCGATGACAGCCTTGTAGACAGGAAGCTGATTGAAAGGCTGCTCAAAACTTCCTCCTTCAATGTTACGGCTGTGGATTCTGGAAGCAAGGCTTTGGAGCTTCTGGGTTTGGTTAGAGAGAGAAATGGAAGCATCCATTCTCCTTATTCCCCTGAAAATCATCATCATCAACATCAAGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTAAGAAAGATCAAGGCAAGAAAATCCTATCTGGTTTTGCAGGAATCTGACTCACTTAAAGACATACCTGTCGTGATTATGTCCTCTGAGAATGTTCCAGCAAGAATCAACAGATGTTTGGAAGAAGGAGCCGAGGAGTTTTTGCTGAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATATGCAGAGGAAAAGCCAAGGAAATGGATTGCAACAATCTCAAGAGAAAGGAAATGGAACAGAGTCAATCATCTGAGAGAACAAGAGCAAAATACAATGAACCTCTCTAAATCTAAACTTCCGGCTTACATTATCAGTTCTTAGAGTTAAATGACCATTATTATGTACTTTCTAATGTTACAAGAGTGAATCATTTTGAGTGTCTGAATGTACAAAGTTGATGAAACTTCGGATTTTTAGGCTTAGAAATCTCATTATTTTGTAGTTTAGATATCTGTACTCATGATTCGATCTCTACCAAAACAAACAAACAAAATAAAGACATACAATCTTGTCTTTTAATTTTCCAATTTTGGCACTGAGCCAC

Coding sequence (CDS)

ATGGCCCTTGTCTCTTCTAATGCTCAATTCCATGTCTTGGCTGTCGATGACAGCCTTGTAGACAGGAAGCTGATTGAAAGGCTGCTCAAAACTTCCTCCTTCAATGTTACGGCTGTGGATTCTGGAAGCAAGGCTTTGGAGCTTCTGGGTTTGGTTAGAGAGAGAAATGGAAGCATCCATTCTCCTTATTCCCCTGAAAATCATCATCATCAACATCAAGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTAAGAAAGATCAAGGCAAGAAAATCCTATCTGGTTTTGCAGGAATCTGACTCACTTAAAGACATACCTGTCGTGATTATGTCCTCTGAGAATGTTCCAGCAAGAATCAACAGATGTTTGGAAGAAGGAGCCGAGGAGTTTTTGCTGAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATATGCAGAGGAAAAGCCAAGGAAATGGATTGCAACAATCTCAAGAGAAAGGAAATGGAACAGAGTCAATCATCTGAGAGAACAAGAGCAAAATACAATGAACCTCTCTAA

Protein sequence

MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQSSERTRAKYNEPL

Homology

[Close]

BLAST of CmoCh04G014040 vs. ExPASy Swiss-Prot
Match: Q4GZK7 (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=RR4 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.7e-49
Identity = 106/162 (65.43%), Postives = 123/162 (75.93%), Query Frame = 0


Query: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60
           M +V + ++FHVLAVDDSL+DRKLIE LLK SS+ VT VDSGSKALELLGL   R+    
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGL---RDEGDD 60

Query: 61  SPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 120
           S  SP +    HQEI+VNLIITDYCMP MTGYDLL+++K          S SLKDIPVVI
Sbjct: 61  SSSSPSSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKG---------SSSLKDIPVVI 120

Query: 121 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGK 163
           MSSENVPARINRCLE+GAEEF LKPVKL+D+ KLK  + + K
Sbjct: 121 MSSENVPARINRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

[Close]

BLAST of CmoCh04G014040 vs. ExPASy Swiss-Prot
Match: Q942A1 (Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica OX=39947 GN=RR4 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.7e-49
Identity = 106/162 (65.43%), Postives = 123/162 (75.93%), Query Frame = 0


Query: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60
           M +V + ++FHVLAVDDSL+DRKLIE LLK SS+ VT VDSGSKALELLGL   R+    
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGL---RDEGDD 60

Query: 61  SPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 120
           S  SP +    HQEI+VNLIITDYCMP MTGYDLL+++K          S SLKDIPVVI
Sbjct: 61  SSSSPSSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKG---------SSSLKDIPVVI 120

Query: 121 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGK 163
           MSSENVPARINRCLE+GAEEF LKPVKL+D+ KLK  + + K
Sbjct: 121 MSSENVPARINRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

[Close]

BLAST of CmoCh04G014040 vs. ExPASy Swiss-Prot
Match: B8BLZ4 (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN=RR10 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.2e-47
Identity = 112/195 (57.44%), Postives = 129/195 (66.15%), Query Frame = 0


Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPY 63
           V+  A FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL    +       
Sbjct: 3   VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHED------- 62

Query: 64  SPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSS 123
           SP +     QE+ VNLIITDYCMP MTGYDLL+KIK         ES  L+DIPVVIMSS
Sbjct: 63  SPISTQSDQQEVGVNLIITDYCMPGMTGYDLLKKIK---------ESSYLRDIPVVIMSS 122

Query: 124 ENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKE-----------MDCNNLK 183
           +N+P+RINRCLEEGA+EF LKPV+LSD++KLKP I + + KE            + NN  
Sbjct: 123 DNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQHLQSNSESNNSS 181

Query: 184 RKEMEQSQSSERTRA 188
               E S SS  T +
Sbjct: 183 NPTSENSSSSTSTNS 181

[Close]

BLAST of CmoCh04G014040 vs. ExPASy Swiss-Prot
Match: Q2QXY3 (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica OX=39947 GN=RR10 PE=2 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 1.2e-47
Identity = 112/195 (57.44%), Postives = 129/195 (66.15%), Query Frame = 0


Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPY 63
           V+  A FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL    +       
Sbjct: 3   VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHED------- 62

Query: 64  SPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSS 123
           SP +     QE+ VNLIITDYCMP MTGYDLL+KIK         ES  L+DIPVVIMSS
Sbjct: 63  SPISTQSDQQEVGVNLIITDYCMPGMTGYDLLKKIK---------ESSYLRDIPVVIMSS 122

Query: 124 ENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKE-----------MDCNNLK 183
           +N+P+RINRCLEEGA+EF LKPV+LSD++KLKP I + + KE            + NN  
Sbjct: 123 DNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQHLQSNSESNNSS 181

Query: 184 RKEMEQSQSSERTRA 188
               E S SS  T +
Sbjct: 183 NPTSENSSSSTSTNS 181

[Close]

BLAST of CmoCh04G014040 vs. ExPASy Swiss-Prot
Match: Q4GZK2 (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=RR9 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-47
Identity = 111/190 (58.42%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPY 63
           V+  A FHVLAVDDSL DRKLIERLLKTSSF VT VDSGSKALE LGL    +       
Sbjct: 3   VAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHED------- 62

Query: 64  SPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSS 123
           SP +     QE+ VNLIITDYCMP MTGYDLL+KIK         ES  L+DIPVVIMSS
Sbjct: 63  SPISTQSDQQEVAVNLIITDYCMPGMTGYDLLKKIK---------ESSYLRDIPVVIMSS 122

Query: 124 ENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKE-----------MDCNNLK 183
           +N+P+RINRCLEEGA+EF LKPV+LSD++KLKP I + + KE            + NN  
Sbjct: 123 DNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQNLQSNSESNNSS 176

[Close]

BLAST of CmoCh04G014040 vs. ExPASy TrEMBL
Match: A0A6J1GZT5 (LOW QUALITY PROTEIN: two-component response regulator ORR11-like OS=Cucurbita moschata OX=3662 GN=LOC111458336 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.0e-94
Identity = 184/193 (95.34%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60
           MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH
Sbjct: 52  MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 111

Query: 61  SPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 120
           SPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIK         ESDSLKDIPVVI
Sbjct: 112 SPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIK---------ESDSLKDIPVVI 171

Query: 121 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQ 180
           MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQ
Sbjct: 172 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQ 231

Query: 181 SSERTRAKYNEPL 194
           SSERTRAKYNEPL
Sbjct: 232 SSERTRAKYNEPL 235

[Close]

BLAST of CmoCh04G014040 vs. ExPASy TrEMBL
Match: A0A5A7SZL1 (Two-component response regulator ORR9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007810 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.1e-71
Identity = 154/181 (85.08%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 1   MALVSSN-AQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSI 60
           M+L+SS+  +FHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGTN 60

Query: 61  H-SPYSPENH-HHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIP 120
           H SP SPENH  H HQEIEVNLIITDYCMPEMTGYDLLRKIK         ESDSLKDIP
Sbjct: 61  HNSPISPENHRQHHHQEIEVNLIITDYCMPEMTGYDLLRKIK---------ESDSLKDIP 120

Query: 121 VVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMDCNNLKRKEM 178
           VVIMSSENVP+RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKE+D N+LKRKEM
Sbjct: 121 VVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGTKAKEIDFNHLKRKEM 172

[Close]

BLAST of CmoCh04G014040 vs. ExPASy TrEMBL
Match: A0A1S3BH64 (two-component response regulator ORR9-like OS=Cucumis melo OX=3656 GN=LOC103489512 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.1e-71
Identity = 154/181 (85.08%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 1   MALVSSN-AQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSI 60
           M+L+SS+  +FHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGTN 60

Query: 61  H-SPYSPENH-HHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIP 120
           H SP SPENH  H HQEIEVNLIITDYCMPEMTGYDLLRKIK         ESDSLKDIP
Sbjct: 61  HNSPISPENHRQHHHQEIEVNLIITDYCMPEMTGYDLLRKIK---------ESDSLKDIP 120

Query: 121 VVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMDCNNLKRKEM 178
           VVIMSSENVP+RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKE+D N+LKRKEM
Sbjct: 121 VVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGTKAKEIDFNHLKRKEM 172

[Close]

BLAST of CmoCh04G014040 vs. ExPASy TrEMBL
Match: A0A0A0KV44 (Response regulatory domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G623800 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.1e-71
Identity = 151/180 (83.89%), Postives = 160/180 (88.89%), Query Frame = 0


Query: 1   MALVSSN-AQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSI 60
           M+L+SS+  +FHVLAVDDSLVDRKLIERLLKTSSFNVT VDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN 60

Query: 61  H-SPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPV 120
           H SP SPE+H   HQEIEVNLIITDYCMPEMTG+DLLRKIK         ESDSLKDIPV
Sbjct: 61  HSSPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIK---------ESDSLKDIPV 120

Query: 121 VIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMDCNNLKRKEME 178
           VIMSSENVP+RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKEMD N+LKRKEME
Sbjct: 121 VIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHLKRKEME 171

[Close]

BLAST of CmoCh04G014040 vs. ExPASy TrEMBL
Match: A0A6J1CBT9 (two-component response regulator ORR4-like OS=Momordica charantia OX=3673 GN=LOC111010126 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 9.3e-67
Identity = 147/190 (77.37%), Postives = 156/190 (82.11%), Query Frame = 0


Query: 2   ALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNG---S 61
           A+VS+ AQFHVLAVDDSL+DRKLIERLLKTSSFNVTAVDSGSKALELLGLVR+RNG   S
Sbjct: 3   AVVSAEAQFHVLAVDDSLIDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRDRNGGGSS 62

Query: 62  IHSPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPV 121
           IHS  SP      HQEIEVN+IITDYCMPEMTGYDLLRKIK         ES+SLKDIPV
Sbjct: 63  IHSSVSP-----LHQEIEVNMIITDYCMPEMTGYDLLRKIK---------ESESLKDIPV 122

Query: 122 VIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQ 181
           VIMSSENVP+RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEM+         + 
Sbjct: 123 VIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEME---------QS 169

Query: 182 SQSSERTRAK 189
            QS ERTR K
Sbjct: 183 QQSYERTRTK 169

[Close]

BLAST of CmoCh04G014040 vs. NCBI nr
Match: XP_022956694.1 (LOW QUALITY PROTEIN: two-component response regulator ORR11-like [Cucurbita moschata])

HSP 1 Score: 354.0 bits (907), Expect = 8.3e-94
Identity = 184/193 (95.34%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60
           MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH
Sbjct: 52  MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 111

Query: 61  SPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVI 120
           SPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIK         ESDSLKDIPVVI
Sbjct: 112 SPYSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIK---------ESDSLKDIPVVI 171

Query: 121 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQ 180
           MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQ
Sbjct: 172 MSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQ 231

Query: 181 SSERTRAKYNEPL 194
           SSERTRAKYNEPL
Sbjct: 232 SSERTRAKYNEPL 235

[Close]

BLAST of CmoCh04G014040 vs. NCBI nr
Match: XP_023526911.1 (two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.9 bits (886), Expect = 2.3e-91
Identity = 182/194 (93.81%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60
           MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH
Sbjct: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60

Query: 61  SPYSPENHHHQ-HQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVV 120
           SP+ PENHHHQ HQEIEVNLIITDYCMPEMTGYDLLRKIK         ESDSLKDIPVV
Sbjct: 61  SPFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIK---------ESDSLKDIPVV 120

Query: 121 IMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQS 180
           IMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQS
Sbjct: 121 IMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQS 180

Query: 181 QSSERTRAKYNEPL 194
           QSSERTRAKYNEPL
Sbjct: 181 QSSERTRAKYNEPL 185

[Close]

BLAST of CmoCh04G014040 vs. NCBI nr
Match: KAG6601130.1 (Two-component response regulator ORR9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90
Identity = 181/194 (93.30%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60
           MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH
Sbjct: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60

Query: 61  SPYSPENHHHQ-HQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVV 120
           SP+SPENH+HQ HQEIEVNLIITDYCMPEMTGYDLLRKIK         ESDSLKDIPVV
Sbjct: 61  SPFSPENHNHQHHQEIEVNLIITDYCMPEMTGYDLLRKIK---------ESDSLKDIPVV 120

Query: 121 IMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQS 180
           IMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCN+LKRKEMEQS
Sbjct: 121 IMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNSLKRKEMEQS 180

Query: 181 QSSERTRAKYNEPL 194
           QSSERTRAKYNEPL
Sbjct: 181 QSSERTRAKYNEPL 185

[Close]

BLAST of CmoCh04G014040 vs. NCBI nr
Match: XP_038892701.1 (two-component response regulator ORR4-like [Benincasa hispida])

HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82
Identity = 168/195 (86.15%), Postives = 174/195 (89.23%), Query Frame = 0


Query: 1   MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIH 60
           MAL+S+  +FHVLAVDDSL+DRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGS H
Sbjct: 1   MALLSAEPRFHVLAVDDSLIDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSNH 60

Query: 61  SPYSPEN----HHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDI 120
           SP SPEN    HHH HQEIEVNLIITDYCMPEMTGYDLLRKIK         ESDSLKDI
Sbjct: 61  SPISPENHHHYHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIK---------ESDSLKDI 120

Query: 121 PVVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEM 180
           PVVIMSSENVP+RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGK KEMD NNLKRKEM
Sbjct: 121 PVVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKDKEMDINNLKRKEM 180

Query: 181 EQSQSSERTRAKYNE 192
           E+SQSSERTR KYNE
Sbjct: 181 EKSQSSERTRTKYNE 186

[Close]

BLAST of CmoCh04G014040 vs. NCBI nr
Match: XP_008446956.1 (PREDICTED: two-component response regulator ORR9-like [Cucumis melo] >KAA0034757.1 two-component response regulator ORR9-like [Cucumis melo var. makuwa])

HSP 1 Score: 278.5 bits (711), Expect = 4.4e-71
Identity = 154/181 (85.08%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 1   MALVSSN-AQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSI 60
           M+L+SS+  +FHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNG+ 
Sbjct: 1   MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGTN 60

Query: 61  H-SPYSPENH-HHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIP 120
           H SP SPENH  H HQEIEVNLIITDYCMPEMTGYDLLRKIK         ESDSLKDIP
Sbjct: 61  HNSPISPENHRQHHHQEIEVNLIITDYCMPEMTGYDLLRKIK---------ESDSLKDIP 120

Query: 121 VVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG-KAKEMDCNNLKRKEM 178
           VVIMSSENVP+RINRCLEEGAEEFLLKPVKLSDVNKLKPFICRG KAKE+D N+LKRKEM
Sbjct: 121 VVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGTKAKEIDFNHLKRKEM 172

[Close]

BLAST of CmoCh04G014040 vs. TAIR 10
Match: AT3G57040.1 (response regulator 9 )

HSP 1 Score: 189.5 bits (480), Expect = 2.5e-48
Identity = 108/182 (59.34%), Postives = 132/182 (72.53%), Query Frame = 0


Query: 4   VSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPY 63
           +++ +QFHVLAVDDSL DRKLIERLL+ SS  VT VDSGSKALE LGL +  + +  + +
Sbjct: 3   MAAESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAF 62

Query: 64  S--PENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIM 123
           S  P N    HQ +EVNLIITDYCMP MTGYDLL+K+K         ES + +DIPVVIM
Sbjct: 63  SKAPVN----HQVVEVNLIITDYCMPGMTGYDLLKKVK---------ESSAFRDIPVVIM 122

Query: 124 SSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQS 183
           SSENVPARI+RCLEEGAEEF LKPV+L+D+NKLKP + + K K     N K +E+E +  
Sbjct: 123 SSENVPARISRCLEEGAEEFFLKPVRLADLNKLKPHMMKTKLK-----NQKLEEIETTSK 166

[Close]

BLAST of CmoCh04G014040 vs. TAIR 10
Match: AT2G41310.1 (response regulator 3 )

HSP 1 Score: 184.9 bits (468), Expect = 6.2e-47
Identity = 100/163 (61.35%), Postives = 121/163 (74.23%), Query Frame = 0


Query: 3   LVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSP 62
           ++ + ++FHVLAVDDSL DRK+IERLL+ SS  VT VDSGSKALE LGL  + N      
Sbjct: 2   VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALS 61

Query: 63  YSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMS 122
            SP+     HQE+E+NLIITDYCMP MTGYDLL+K+K         ES + + IPVVIMS
Sbjct: 62  TSPQ----IHQEVEINLIITDYCMPGMTGYDLLKKVK---------ESAAFRSIPVVIMS 121

Query: 123 SENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKE 166
           SENVPARI+RCLEEGAEEF LKPVKL+D+ KLKP + + K K+
Sbjct: 122 SENVPARISRCLEEGAEEFFLKPVKLADLTKLKPHMMKTKLKK 151

[Close]

BLAST of CmoCh04G014040 vs. TAIR 10
Match: AT1G59940.1 (response regulator 3 )

HSP 1 Score: 156.8 bits (395), Expect = 1.8e-38
Identity = 87/152 (57.24%), Postives = 108/152 (71.05%), Query Frame = 0


Query: 9   QFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPYSPENH 68
           Q HVLAVDDSLVDR +IERLL+ +S  VTAVDSG +ALE LGL  ++             
Sbjct: 32  QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAV---------- 91

Query: 69  HHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSSENVPA 128
             +   ++V+LIITDYCMP MTGY+LL+KIK         ES S K++PVVIMSSENV  
Sbjct: 92  --EFDRLKVDLIITDYCMPGMTGYELLKKIK---------ESTSFKEVPVVIMSSENVMT 151

Query: 129 RINRCLEEGAEEFLLKPVKLSDVNKLKPFICR 161
           RI+RCLEEGAE+FLLKPVKL+DV +L+ ++ R
Sbjct: 152 RIDRCLEEGAEDFLLKPVKLADVKRLRSYLTR 162

[Close]

BLAST of CmoCh04G014040 vs. TAIR 10
Match: AT1G74890.1 (response regulator 15 )

HSP 1 Score: 156.4 bits (394), Expect = 2.4e-38
Identity = 91/187 (48.66%), Postives = 123/187 (65.78%), Query Frame = 0


Query: 5   SSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPYS 64
           SS+ + HVLAVDDS VDRK+IERLLK S+  VT V+SG++AL+ LGL             
Sbjct: 13  SSSPELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGL------------D 72

Query: 65  PENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSSE 124
            +N     ++++VNLI+TDY MP +TGY+LL+KIK         ES +L++IPVVIMSSE
Sbjct: 73  GDNGSSGLKDLKVNLIVTDYSMPGLTGYELLKKIK---------ESSALREIPVVIMSSE 132

Query: 125 NVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICR------GKAKEMDCNNLKRKEMEQ 184
           N+  RI +C+ EGAEEFLLKPVKL+DV +LK  I R      GK K++    + + +++ 
Sbjct: 133 NIQPRIEQCMIEGAEEFLLKPVKLADVKRLKELIMRGGEAEEGKTKKLSPKRILQNDIDS 178

Query: 185 SQSSERT 186
           S SS  T
Sbjct: 193 SPSSSST 178

[Close]

BLAST of CmoCh04G014040 vs. TAIR 10
Match: AT1G19050.1 (response regulator 7 )

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-37
Identity = 89/182 (48.90%), Postives = 121/182 (66.48%), Query Frame = 0


Query: 3   LVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSP 62
           L  +  + HVLAVDDS+VDRK+IERLL+ SS  VT V+SG++AL+ LGL   +  S    
Sbjct: 17  LTVTTPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGAS---- 76

Query: 63  YSPENHHHQHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMS 122
                     ++++VNLI+TDY MP ++GYDLL+KIK         ES + +++PVVIMS
Sbjct: 77  --------NLKDLKVNLIVTDYSMPGLSGYDLLKKIK---------ESSAFREVPVVIMS 136

Query: 123 SENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMD--CNNLKRKEMEQSQ 182
           SEN+  RI  CL+EGAEEFLLKPVKL+DV ++K  I R +A+E     ++ KRK  E S 
Sbjct: 137 SENILPRIQECLKEGAEEFLLKPVKLADVKRIKQLIMRNEAEECKILSHSNKRKLQEDSD 177

The following BLAST results are available for this feature:

BLAST of CmoCh04G014040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4GZK7	1.7e-49	65.43	Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q942A1	1.7e-49	65.43	Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
B8BLZ4	1.2e-47	57.44	Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
Q2QXY3	1.2e-47	57.44	Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q4GZK2	1.6e-47	58.42	Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of CmoCh04G014040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZT5	4.0e-94	95.34	LOW QUALITY PROTEIN: two-component response regulator ORR11-like OS=Cucurbita mo...	[more]
A0A5A7SZL1	2.1e-71	85.08	Two-component response regulator ORR9-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BH64	2.1e-71	85.08	two-component response regulator ORR9-like OS=Cucumis melo OX=3656 GN=LOC1034895...	[more]
A0A0A0KV44	8.1e-71	83.89	Response regulatory domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A6J1CBT9	9.3e-67	77.37	two-component response regulator ORR4-like OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of CmoCh04G014040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956694.1	8.3e-94	95.34	LOW QUALITY PROTEIN: two-component response regulator ORR11-like [Cucurbita mosc...	[more]
XP_023526911.1	2.3e-91	93.81	two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo]	[more]
KAG6601130.1	1.5e-90	93.30	Two-component response regulator ORR9, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_038892701.1	1.1e-82	86.15	two-component response regulator ORR4-like [Benincasa hispida]	[more]
XP_008446956.1	4.4e-71	85.08	PREDICTED: two-component response regulator ORR9-like [Cucumis melo] >KAA0034757...	[more]

BLAST of CmoCh04G014040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57040.1	2.5e-48	59.34	response regulator 9	[more]
AT2G41310.1	6.2e-47	61.35	response regulator 3	[more]
AT1G59940.1	1.8e-38	57.24	response regulator 3	[more]
AT1G74890.1	2.4e-38	48.66	response regulator 15	[more]
AT1G19050.1	1.2e-37	48.90	response regulator 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 10..155 e-value: 6.5E-15 score: 65.6
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 12..151 e-value: 7.7E-18 score: 64.7
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 11..159 score: 32.471687
None	No IPR available	GENE3D	3.40.50.2300		coord: 11..191 e-value: 1.6E-30 score: 108.9
None	No IPR available	PIRSR	PIRSR002937-1	PIRSR002937-1	coord: 73..182 e-value: 3.1E-4 score: 17.7 coord: 12..48 e-value: 560.0 score: -2.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..193
None	No IPR available	PANTHER	PTHR43874	TWO-COMPONENT RESPONSE REGULATOR	coord: 4..191
None	No IPR available	PANTHER	PTHR43874:SF140	RESPONSE REGULATOR ARR8, PUTATIVE-RELATED	coord: 4..191
None	No IPR available	CDD	cd17581	REC_typeA_ARR	coord: 12..154 e-value: 4.08969E-74 score: 217.234
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 10..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G014040.1	CmoCh04G014040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity