Homology
BLAST of CmoCh04G013320 vs. ExPASy Swiss-Prot
Match:
Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)
HSP 1 Score: 396.4 bits (1017), Expect = 7.8e-109
Identity = 229/723 (31.67%), Postives = 375/723 (51.87%), Query Frame = 0
Query: 71 GFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAENGEFEVCLETF 130
G D + ++ Y + G + + +F EM +VV+W+++ISG + G V +E F
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 131 LDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVGGSTLSMYARL 190
+M + + TLGSV+ A + G VH + KLG+ N++VG S +SMY++
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 191 GDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIKMDKFTIVSAI 250
+ +A VFE +++ + WNAMI GY + G + + + S G +D FT S +
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 251 KACSIIQDLDSGKELHGFILRHRLTSTEAM-NALIDMYFINGRKNSALKTFNSMQSRDII 310
C+ DL+ G + H I++ +L + NAL+DMY G A + F M RD +
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 311 SWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLA 370
+WNT+ G + + E DLF + L G+ + +S + C + G Q L+
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 371 VHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYNLNSLDMEAL 430
V G + SS++ M+++CG+++ VF SL + + N LI Y+ N+L+ EA+
Sbjct: 556 VKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAV 615
Query: 431 RTFSSL---GVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGS-NRYVSCSLMKC 490
F + GV +E T + I+E K E+ L Q H K GF S Y+ SL+
Sbjct: 616 VLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGM 675
Query: 491 YIIIGFLESSFEIFNELES-VDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFI 550
Y+ + + +F+EL S + W ++S EA F + PD+
Sbjct: 676 YMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQAT 735
Query: 551 LSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSG 610
++L CS ++ + +AIHSL + L ++ +ID YAKCGD+ + + F++
Sbjct: 736 FVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 795
Query: 611 ESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLIEQGH 670
++++ +NS+I YA +G A A+++F+ MR +++ P + TF V++AC+H G + G
Sbjct: 796 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGR 855
Query: 671 SLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRI 730
+F M +Y I D+ C+VD+L R G+L +A IE+ P + SLL CRI
Sbjct: 856 KIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRI 915
Query: 731 YGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKDPGYS 788
+G+ G+ +AEKL+ L PQN +A+VLLS +Y+ WE A +RK M DR V K PGYS
Sbjct: 916 HGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYS 975
BLAST of CmoCh04G013320 vs. ExPASy Swiss-Prot
Match:
Q9SVA5 (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E52 PE=3 SV=1)
HSP 1 Score: 394.0 bits (1011), Expect = 3.9e-108
Identity = 239/764 (31.28%), Postives = 383/764 (50.13%), Query Frame = 0
Query: 33 DFP--VGRNNPQTIAAALSLSENVKSFIFGAQIHGHICKLGFTYDTFSMNNLVKMYCKCG 92
DFP +G + A L L + + +HG I G DT+ N L+ +Y + G
Sbjct: 34 DFPSTIGIRGRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAG 93
Query: 93 FMCEGLKVFEEMPHRNVVSWSLIISGAAENGEFEVCLETFLDMMRDGL-VPNEFTLGSVM 152
M KVFE+MP RN+VSWS ++S +G +E L FL+ R PNE+ L S +
Sbjct: 94 GMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI 153
Query: 153 KACADI-GACRF-GSSVHCLSWKLGIEQNVFVGGSTLSMYARLGDITSAKLVFEWMDKVD 212
+AC+ + G R+ + K G +++V+VG + Y + G+I A+LVF+ + +
Sbjct: 154 QACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS 213
Query: 213 VGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIKMDKFTIVSAIKACSIIQDLDSGKELHG 272
W MI G G +L L+ + D + + + + ACSI+ L+ GK++H
Sbjct: 214 TVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHA 273
Query: 273 FILRHRL-TSTEAMNALIDMYFINGRKNSALKTFNSMQSRDIISWNTVFGGLSDENDAKE 332
ILR+ L MN LID Y GR +A K FN M +++IISW T+ G KE
Sbjct: 274 HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE 333
Query: 333 TMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLDESSVVSSMLS 392
M+LF G+KP+ SS+ C L G Q + + ++S V +S++
Sbjct: 334 AMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLID 393
Query: 393 MFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYNLNSLDM---EALRTFSSLG---VEAN 452
M+A+C + VFD + +N +I Y+ EAL F + + +
Sbjct: 394 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPS 453
Query: 453 EYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSCSLMKCYIIIGFLESSFEIFN 512
T ++ + + L +Q+H K G + + +L+ Y L+ S +F+
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFD 513
Query: 513 ELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSILNGCSSSAAYHQ 572
E++ D+ W ++ + V Q+ EA L S E+PDEF ++++ + A+
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQL 573
Query: 573 TKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYNSMIMAYA 632
+ H K G + ++ +A++D YAKCG A +AF+ S S D++ +NS+I +YA
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD-SAASRDVVCWNSVISSYA 633
Query: 633 HHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLIEQGHSLFRTMKSEYNITPSR 692
+HG +A+Q+ EKM + ++P+ TF V+SAC+H GL+E G F M + I P
Sbjct: 634 NHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPET 693
Query: 693 DNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNRELGQWTAEKLLS 752
++Y C+V +L R G L AR +IE MP P + RSLLSGC GN EL + AE +
Sbjct: 694 EHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAIL 753
Query: 753 LAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKDPGYS 785
P++ +F +LS +Y+ W +A K+R+ M V+K+PG S
Sbjct: 754 SDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRS 795
BLAST of CmoCh04G013320 vs. ExPASy Swiss-Prot
Match:
Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)
HSP 1 Score: 380.9 bits (977), Expect = 3.4e-104
Identity = 227/749 (30.31%), Postives = 384/749 (51.27%), Query Frame = 0
Query: 44 IAAALSLSENVKSFIFGAQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEM- 103
I+ ALS S N+ +IH + LG F L+ Y L VF +
Sbjct: 10 ISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 69
Query: 104 PHRNVVSWSLIISGAAENGEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGS 163
P +NV W+ II ++NG F LE + + + P+++T SV+KACA + G
Sbjct: 70 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 129
Query: 164 SVHCLSWKLGIEQNVFVGGSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCG 223
V+ +G E ++FVG + + MY+R+G +T A+ VF+ M D+ WN++I GY++ G
Sbjct: 130 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 189
Query: 224 HGLEALNAVSLLVSKGIKMDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAM-N 283
+ EAL L + I D FT+ S + A + + G+ LHGF L+ + S + N
Sbjct: 190 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 249
Query: 284 ALIDMYFINGRKNSALKTFNSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKP 343
L+ MY R A + F+ M RD +S+NT+ G +E++ +F + L+ KP
Sbjct: 250 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKP 309
Query: 344 NHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVF 403
+ +T SS+ R CG L D L ++ + GF+ ES+V + ++ ++A+CG M VF
Sbjct: 310 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 369
Query: 404 DSLVFKPISAWNQLILAYNLNSLDMEALRTFSSLGV---EANEYTHSIIIETACKSENPW 463
+S+ K +WN +I Y + MEA++ F + + +A+ T+ ++I + + +
Sbjct: 370 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 429
Query: 464 LCRQLHCASLKAGFGSNRYVSCSLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALV 523
+ LH +K+G + VS +L+ Y G + S +IF+ + + D TW VISA V
Sbjct: 430 FGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACV 489
Query: 524 HQNHTYEAFMFLNVLMESDEKPDEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVH 583
+ +S+ PD L C+S AA K IH + G+ +
Sbjct: 490 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 549
Query: 584 VASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNA 643
+ +A+I+ Y+KCG + ++ R FE+ D++ + MI AY +G +A++ F M +
Sbjct: 550 IGNALIEMYSKCGCLENSSRVFERMSR-RDVVTWTGMIYAYGMYGEGEKALETFADMEKS 609
Query: 644 NLQPSQATFASVISACAHFGLIEQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYD 703
+ P F ++I AC+H GL+++G + F MK+ Y I P ++Y C+VD+LSR+ +
Sbjct: 610 GIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 669
Query: 704 ARYVIESMPFSPWPAILRSLLSGCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSE 763
A I++MP P +I S+L CR G+ E + + +++ L P + +L S Y+
Sbjct: 670 AEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAA 729
Query: 764 GNSWEDAAKIRKGMTDREVLKDPGYSRVE 788
W+ + IRK + D+ + K+PGYS +E
Sbjct: 730 LRKWDKVSLIRKSLKDKHITKNPGYSWIE 753
BLAST of CmoCh04G013320 vs. ExPASy Swiss-Prot
Match:
Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 376.7 bits (966), Expect = 6.4e-103
Identity = 210/730 (28.77%), Postives = 371/730 (50.82%), Query Frame = 0
Query: 62 QIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAENG 121
QIH I G T N L+ +Y + GF+ +VF+ + ++ SW +ISG ++N
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 122 EFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVGG 181
+ F DM G++P + SV+ AC I + G +H L KLG + +V
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 182 STLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIKM 241
+ +S+Y LG++ SA+ +F M + D +N +I G + CG+G +A+ + G++
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 242 DKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAM-NALIDMYFINGRKNSALKTF 301
D T+ S + ACS L G++LH + + S + AL+++Y +AL F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 302 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 361
+ +++ WN + +D + + +F + +E + PN T+ S+ + C L D +
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 362 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 421
LG Q S + F + V S ++ M+A+ G ++ + K + +W +I Y
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 422 LNSLDMEALRTFSSL---GVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRY 481
+ D +AL TF + G+ ++E + + + +Q+H + +GF S+
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 482 VSCSLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESD 541
+L+ Y G +E S+ F + E+ D W A++S + EA +
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 687
Query: 542 EKPDEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQ 601
+ F S + S +A Q K +H++ K G+ V +A+I YAKCG I A+
Sbjct: 688 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 747
Query: 602 RAFEKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHF 661
+ F + N+ + +N++I AY+ HG +A+ F++M ++N++P+ T V+SAC+H
Sbjct: 748 KQFLEVSTKNE-VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 807
Query: 662 GLIEQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRS 721
GL+++G + F +M SEY ++P ++Y C+VDML+R G L A+ I+ MP P + R+
Sbjct: 808 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 867
Query: 722 LLSGCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREV 781
LLS C ++ N E+G++ A LL L P++ A +VLLS +Y+ W+ R+ M ++ V
Sbjct: 868 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 927
Query: 782 LKDPGYSRVE 788
K+PG S +E
Sbjct: 928 KKEPGQSWIE 936
BLAST of CmoCh04G013320 vs. ExPASy Swiss-Prot
Match:
Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 369.4 bits (947), Expect = 1.0e-100
Identity = 218/757 (28.80%), Postives = 384/757 (50.73%), Query Frame = 0
Query: 39 NNP-QTIAAALSLSENVKSFIFGAQIHGHICKLGFTYD-TFSMNNLVKMYCKCGFMCEGL 98
N+P + A L L ++ G Q+H I K +++ F LV MY KCG + +
Sbjct: 77 NSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAE 136
Query: 99 KVFEEMPHRNVVSWSLIISGAAENGEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIG 158
KVF+EMP R +W+ +I NGE L + +M +G+ + +++KACA +
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 159 ACRFGSSVHCLSWKLGIEQNVFVGGSTLSMYARLGDITSAKLVFE-WMDKVDVGCWNAMI 218
R GS +H L KLG F+ + +SMYA+ D+++A+ +F+ + +K D WN+++
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 219 GGYTNCGHGLEALNAVSLLVSKGIKMDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLT 278
Y+ G LE L + G + +TIVSA+ AC GKE+H +L+
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 279 STE--AMNALIDMYFINGRKNSALKTFNSMQSRDIISWNTVFGGLSDENDAKETMDLFGK 338
S+E NALI MY G+ A + M + D+++WN++ G KE ++ F
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 339 FMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGL 398
+ G K + ++ +S+ G L + G + + + G+ V ++++ M+++C L
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 399 MEMVLSVFDSLVFKPISAWNQLILAYNLNSLDMEALRTFSSLG---VEANEYTHSIIIET 458
+ F + K + +W +I Y N +EAL F + +E +E I+
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 459 ACKSENPWLCRQLHCASLKAGFGSNRYVSCSLMKCYIIIGFLESSFEIFNELESVDMATW 518
+ ++ + +++HC L+ G + + L+ Y + + +F ++ D+ +W
Sbjct: 497 SSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSW 556
Query: 519 GAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSILNGCSSSAAYHQTKAIHSLAEK 578
++IS+ + EA ++E+ D L IL+ +S +A ++ + IH +
Sbjct: 557 TSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLR 616
Query: 579 MGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYNSMIMAYAHHGLAWQAIQ 638
GF L +A A++D YA CGD+ SA+ F++ E ++ Y SMI AY HG A++
Sbjct: 617 KGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI-ERKGLLQYTSMINAYGMHGCGKAAVE 676
Query: 639 VFEKMRNANLQPSQATFASVISACAHFGLIEQGHSLFRTMKSEYNITPSRDNYGCLVDML 698
+F+KMR+ N+ P +F +++ AC+H GL+++G + M+ EY + P ++Y CLVDML
Sbjct: 677 LFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDML 736
Query: 699 SRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNRELGQWTAEKLLSLAPQNDAAFV 758
R + +A ++ M P + +LL+ CR + +E+G+ A++LL L P+N V
Sbjct: 737 GRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLV 796
Query: 759 LLSKVYSEGNSWEDAAKIRKGMTDREVLKDPGYSRVE 788
L+S V++E W D K+R M + K PG S +E
Sbjct: 797 LVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 831
BLAST of CmoCh04G013320 vs. ExPASy TrEMBL
Match:
A0A6J1GWK5 (pentatricopeptide repeat-containing protein At4g39530-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458121 PE=4 SV=1)
HSP 1 Score: 1593.6 bits (4125), Expect = 0.0e+00
Identity = 788/788 (100.00%), Postives = 788/788 (100.00%), Query Frame = 0
Query: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG
Sbjct: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
Query: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN
Sbjct: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
Query: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG
Sbjct: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
Query: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK
Sbjct: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
Query: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF
Sbjct: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
Query: 301 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK
Sbjct: 301 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
Query: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN
Sbjct: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
Query: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC
Sbjct: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
Query: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP
Sbjct: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
Query: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF
Sbjct: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
Query: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI 660
EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI
Sbjct: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI 660
Query: 661 EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS
Sbjct: 661 EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
Query: 721 GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 780
GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD
Sbjct: 721 GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 780
Query: 781 PGYSRVET 789
PGYSRVET
Sbjct: 781 PGYSRVET 788
BLAST of CmoCh04G013320 vs. ExPASy TrEMBL
Match:
A0A6J1KBN1 (pentatricopeptide repeat-containing protein At4g39530-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493472 PE=4 SV=1)
HSP 1 Score: 1558.9 bits (4035), Expect = 0.0e+00
Identity = 769/788 (97.59%), Postives = 779/788 (98.86%), Query Frame = 0
Query: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
MKASALGSG VLLANRALN HPLFQRF SFSY+FPV RNNPQ IAAALSLSENVKSFIFG
Sbjct: 1 MKASALGSGLVLLANRALNIHPLFQRFSSFSYNFPVSRNNPQNIAAALSLSENVKSFIFG 60
Query: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMP RNVVSWSLIISGAAEN
Sbjct: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPQRNVVSWSLIISGAAEN 120
Query: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACAD+GACRFGSSVHCLSWKLGIEQNVFVG
Sbjct: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADVGACRFGSSVHCLSWKLGIEQNVFVG 180
Query: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEAL+AVSLLVSKGIK
Sbjct: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALSAVSLLVSKGIK 240
Query: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF
Sbjct: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
Query: 301 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
NS+QSRDIISWNTVFGGLSDENDAKET+DLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK
Sbjct: 301 NSLQSRDIISWNTVFGGLSDENDAKETVDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
Query: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKP+SAWNQLILAYN
Sbjct: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPVSAWNQLILAYN 420
Query: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
LNSLDMEALRTFSSLGVEANEYT+SIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC
Sbjct: 421 LNSLDMEALRTFSSLGVEANEYTYSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
Query: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP
Sbjct: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
Query: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF
Sbjct: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
Query: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI 660
EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATF SVISACAHFGLI
Sbjct: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFVSVISACAHFGLI 660
Query: 661 EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
EQG SLFRTMKS+YNI PSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS
Sbjct: 661 EQGRSLFRTMKSDYNIIPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
Query: 721 GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 780
GCRIYGNRELG+WTAEKLLSLAPQNDAA+VLLSKVYSEGNSWEDAAKIRKGMTDREVLKD
Sbjct: 721 GCRIYGNRELGRWTAEKLLSLAPQNDAAYVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 780
Query: 781 PGYSRVET 789
PGYSRVET
Sbjct: 781 PGYSRVET 788
BLAST of CmoCh04G013320 vs. ExPASy TrEMBL
Match:
A0A6J1KI91 (pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493472 PE=4 SV=1)
HSP 1 Score: 1477.2 bits (3823), Expect = 0.0e+00
Identity = 737/788 (93.53%), Postives = 747/788 (94.80%), Query Frame = 0
Query: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
MKASALGSG VLLANRALN HPLFQRF SFSY+FPV RNNPQ IAAALSLSENVKSFIFG
Sbjct: 1 MKASALGSGLVLLANRALNIHPLFQRFSSFSYNFPVSRNNPQNIAAALSLSENVKSFIFG 60
Query: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMP RNVVSWSLIISGAAEN
Sbjct: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPQRNVVSWSLIISGAAEN 120
Query: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACAD+GACRFGSSVHCLSWKLGIEQNVFVG
Sbjct: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADVGACRFGSSVHCLSWKLGIEQNVFVG 180
Query: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEAL+AVSLLVSKGIK
Sbjct: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALSAVSLLVSKGIK 240
Query: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF
Sbjct: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
Query: 301 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
NS+QSRDIISWNTVFGGLSDENDAKET+DLFGKFMLE
Sbjct: 301 NSLQSRDIISWNTVFGGLSDENDAKETVDLFGKFMLE----------------------- 360
Query: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
VHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKP+SAWNQLILAYN
Sbjct: 361 ---------VHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPVSAWNQLILAYN 420
Query: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
LNSLDMEALRTFSSLGVEANEYT+SIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC
Sbjct: 421 LNSLDMEALRTFSSLGVEANEYTYSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
Query: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP
Sbjct: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
Query: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF
Sbjct: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
Query: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI 660
EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATF SVISACAHFGLI
Sbjct: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFVSVISACAHFGLI 660
Query: 661 EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
EQG SLFRTMKS+YNI PSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS
Sbjct: 661 EQGRSLFRTMKSDYNIIPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
Query: 721 GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 780
GCRIYGNRELG+WTAEKLLSLAPQNDAA+VLLSKVYSEGNSWEDAAKIRKGMTDREVLKD
Sbjct: 721 GCRIYGNRELGRWTAEKLLSLAPQNDAAYVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 756
Query: 781 PGYSRVET 789
PGYSRVET
Sbjct: 781 PGYSRVET 756
BLAST of CmoCh04G013320 vs. ExPASy TrEMBL
Match:
A0A6J1GYT5 (pentatricopeptide repeat-containing protein At4g13650-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458121 PE=4 SV=1)
HSP 1 Score: 1424.1 bits (3685), Expect = 0.0e+00
Identity = 718/788 (91.12%), Postives = 718/788 (91.12%), Query Frame = 0
Query: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG
Sbjct: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
Query: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN
Sbjct: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
Query: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG
Sbjct: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
Query: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK
Sbjct: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
Query: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF
Sbjct: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
Query: 301 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK
Sbjct: 301 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
Query: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN
Sbjct: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
Query: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSN
Sbjct: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSN----- 480
Query: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
Sbjct: 481 ------------------------------------------------------------ 540
Query: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
SSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF
Sbjct: 541 -----SSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
Query: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI 660
EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI
Sbjct: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI 660
Query: 661 EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS
Sbjct: 661 EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 718
Query: 721 GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 780
GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD
Sbjct: 721 GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 718
Query: 781 PGYSRVET 789
PGYSRVET
Sbjct: 781 PGYSRVET 718
BLAST of CmoCh04G013320 vs. ExPASy TrEMBL
Match:
A0A1S3BDR3 (pentatricopeptide repeat-containing protein At4g13650-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488773 PE=4 SV=1)
HSP 1 Score: 1326.6 bits (3432), Expect = 0.0e+00
Identity = 653/791 (82.55%), Postives = 717/791 (90.64%), Query Frame = 0
Query: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
MK SALG+GFVLL N+AL FHP F+RFLS+S + VGR +P+TIA+ALSLSEN KS I G
Sbjct: 1 MKISALGTGFVLLTNKALKFHPFFERFLSYSCNISVGR-DPKTIASALSLSENTKSLILG 60
Query: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
AQIHGH+CKLGF YDTFSMNNL+KMYC+CGFMCEG KVFEEMP RNVVSWSLIIS EN
Sbjct: 61 AQIHGHMCKLGFDYDTFSMNNLLKMYCRCGFMCEGFKVFEEMPQRNVVSWSLIISSLPEN 120
Query: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
GEFE+CLE+FL+MMRDGL+PNEFT GSVMKACAD+ A FGS VHCLSWKLGIEQNVFVG
Sbjct: 121 GEFELCLESFLEMMRDGLMPNEFTFGSVMKACADVEAYGFGSGVHCLSWKLGIEQNVFVG 180
Query: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
GSTLSMYARLGDITSA+LVFEWM+KVDVGCWNAMIGGYTNCG GL+AL+AVSLL KGIK
Sbjct: 181 GSTLSMYARLGDITSAELVFEWMEKVDVGCWNAMIGGYTNCGLGLKALSAVSLLNCKGIK 240
Query: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
MDKFTIVSAIKACS+IQDLDSGKELHGFILR L ST MNAL+DMYFI+ RKNSALKTF
Sbjct: 241 MDKFTIVSAIKACSLIQDLDSGKELHGFILRRGLISTAVMNALMDMYFISDRKNSALKTF 300
Query: 301 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
NSMQ+RDIISWNTVF G S+EN E +DLFGKFM+EGMKPNHITFS LFR CGVLLD +
Sbjct: 301 NSMQTRDIISWNTVFVGSSNEN---EIVDLFGKFMIEGMKPNHITFSVLFRQCGVLLDSR 360
Query: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
LGFQFFSLAVHLGFLDE+ V+SS++SMF+Q GLMEMV SVFDSLVFKP+SAWNQLILAY+
Sbjct: 361 LGFQFFSLAVHLGFLDETRVLSSIISMFSQIGLMEMVHSVFDSLVFKPVSAWNQLILAYS 420
Query: 421 LNSLDMEALRTFSSL---GVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRY 480
LNS +MEA RTFSSL GV ANEYT+SII+ETACKSENP +CRQLHCASLKAGFGS++Y
Sbjct: 421 LNSFEMEAFRTFSSLLRYGVVANEYTYSIIVETACKSENPRICRQLHCASLKAGFGSHKY 480
Query: 481 VSCSLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESD 540
VSCSL+KCYI+IG LESSFEIFN+LE VDMAT+GAVIS LVHQNH YEA MFLN+LMES
Sbjct: 481 VSCSLIKCYILIGSLESSFEIFNQLEIVDMATYGAVISTLVHQNHIYEAIMFLNILMESG 540
Query: 541 EKPDEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQ 600
+KPDEF SILNGCSS AAYHQTKAIHSL EKMGFG+HVHVASAIIDAYAKCGDIGSAQ
Sbjct: 541 KKPDEFTFGSILNGCSSRAAYHQTKAIHSLVEKMGFGVHVHVASAIIDAYAKCGDIGSAQ 600
Query: 601 RAFEKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHF 660
AFE+S +SND+IVYNSM+MAYAHHGLAW+AIQ FEKMR A +QPSQA+F SVISAC H
Sbjct: 601 GAFEQSCQSNDVIVYNSMMMAYAHHGLAWEAIQTFEKMRIAKVQPSQASFVSVISACGHI 660
Query: 661 GLIEQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRS 720
GL+EQG SLF+TMKS+Y++TPSRDNYGCLVDML+RNGFLYDARY+IESMPFSPWPAILRS
Sbjct: 661 GLVEQGRSLFQTMKSDYSMTPSRDNYGCLVDMLARNGFLYDARYIIESMPFSPWPAILRS 720
Query: 721 LLSGCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREV 780
LLSGCRIYGNRELGQWTAEKLLS+APQNDA +VLLSKVYSEGNSWEDAA IRK MTDR V
Sbjct: 721 LLSGCRIYGNRELGQWTAEKLLSMAPQNDATYVLLSKVYSEGNSWEDAANIRKEMTDRGV 780
Query: 781 LKDPGYSRVET 789
LKDPGYSRVET
Sbjct: 781 LKDPGYSRVET 787
BLAST of CmoCh04G013320 vs. NCBI nr
Match:
XP_022956358.1 (pentatricopeptide repeat-containing protein At4g39530-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 1593.6 bits (4125), Expect = 0.0e+00
Identity = 788/788 (100.00%), Postives = 788/788 (100.00%), Query Frame = 0
Query: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG
Sbjct: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
Query: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN
Sbjct: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
Query: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG
Sbjct: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
Query: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK
Sbjct: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
Query: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF
Sbjct: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
Query: 301 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK
Sbjct: 301 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
Query: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN
Sbjct: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
Query: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC
Sbjct: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
Query: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP
Sbjct: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
Query: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF
Sbjct: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
Query: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI 660
EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI
Sbjct: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI 660
Query: 661 EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS
Sbjct: 661 EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
Query: 721 GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 780
GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD
Sbjct: 721 GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 780
Query: 781 PGYSRVET 789
PGYSRVET
Sbjct: 781 PGYSRVET 788
BLAST of CmoCh04G013320 vs. NCBI nr
Match:
KAG6601062.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1574.7 bits (4076), Expect = 0.0e+00
Identity = 778/788 (98.73%), Postives = 783/788 (99.37%), Query Frame = 0
Query: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQ+IAAALSLSENVKSFIFG
Sbjct: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQSIAAALSLSENVKSFIFG 60
Query: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN
Sbjct: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
Query: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGI+QNVFVG
Sbjct: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIQQNVFVG 180
Query: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK
Sbjct: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
Query: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
MDKFTIVSAIKACSIIQDLDSGKELHGFILR RLTSTEAMNALIDMYFINGRKNSALKTF
Sbjct: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRRRLTSTEAMNALIDMYFINGRKNSALKTF 300
Query: 301 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
NSMQSRDIISWNTVFGGLSDENDAKET+DLFGKF+LEGMKPNHITFSSLFRVCGVLLDCK
Sbjct: 301 NSMQSRDIISWNTVFGGLSDENDAKETVDLFGKFVLEGMKPNHITFSSLFRVCGVLLDCK 360
Query: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN
Sbjct: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
Query: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC
Sbjct: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
Query: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
SLMKCYIIIGFLESSFEIFNELESVDMATWGAVIS LVHQNHTYEAFMFLNVLMESDEKP
Sbjct: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISTLVHQNHTYEAFMFLNVLMESDEKP 540
Query: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF
Sbjct: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
Query: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI 660
EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATF SVISACAHFGLI
Sbjct: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFVSVISACAHFGLI 660
Query: 661 EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
EQG SLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS
Sbjct: 661 EQGRSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
Query: 721 GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 780
GCRIYG+RELGQWTAEKLLSLAPQNDAAFVLLS VYSEGNSWEDAAKIRKGMTDREVLKD
Sbjct: 721 GCRIYGDRELGQWTAEKLLSLAPQNDAAFVLLSNVYSEGNSWEDAAKIRKGMTDREVLKD 780
Query: 781 PGYSRVET 789
PGYSRVET
Sbjct: 781 PGYSRVET 788
BLAST of CmoCh04G013320 vs. NCBI nr
Match:
XP_022998951.1 (pentatricopeptide repeat-containing protein At4g39530-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1558.9 bits (4035), Expect = 0.0e+00
Identity = 769/788 (97.59%), Postives = 779/788 (98.86%), Query Frame = 0
Query: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
MKASALGSG VLLANRALN HPLFQRF SFSY+FPV RNNPQ IAAALSLSENVKSFIFG
Sbjct: 1 MKASALGSGLVLLANRALNIHPLFQRFSSFSYNFPVSRNNPQNIAAALSLSENVKSFIFG 60
Query: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMP RNVVSWSLIISGAAEN
Sbjct: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPQRNVVSWSLIISGAAEN 120
Query: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACAD+GACRFGSSVHCLSWKLGIEQNVFVG
Sbjct: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADVGACRFGSSVHCLSWKLGIEQNVFVG 180
Query: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEAL+AVSLLVSKGIK
Sbjct: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALSAVSLLVSKGIK 240
Query: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF
Sbjct: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
Query: 301 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
NS+QSRDIISWNTVFGGLSDENDAKET+DLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK
Sbjct: 301 NSLQSRDIISWNTVFGGLSDENDAKETVDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
Query: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKP+SAWNQLILAYN
Sbjct: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPVSAWNQLILAYN 420
Query: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
LNSLDMEALRTFSSLGVEANEYT+SIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC
Sbjct: 421 LNSLDMEALRTFSSLGVEANEYTYSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
Query: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP
Sbjct: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
Query: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF
Sbjct: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
Query: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI 660
EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATF SVISACAHFGLI
Sbjct: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFVSVISACAHFGLI 660
Query: 661 EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
EQG SLFRTMKS+YNI PSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS
Sbjct: 661 EQGRSLFRTMKSDYNIIPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
Query: 721 GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 780
GCRIYGNRELG+WTAEKLLSLAPQNDAA+VLLSKVYSEGNSWEDAAKIRKGMTDREVLKD
Sbjct: 721 GCRIYGNRELGRWTAEKLLSLAPQNDAAYVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 780
Query: 781 PGYSRVET 789
PGYSRVET
Sbjct: 781 PGYSRVET 788
BLAST of CmoCh04G013320 vs. NCBI nr
Match:
KAG7031872.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1555.0 bits (4025), Expect = 0.0e+00
Identity = 769/776 (99.10%), Postives = 773/776 (99.61%), Query Frame = 0
Query: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG
Sbjct: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
Query: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN
Sbjct: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
Query: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGI+QNVFVG
Sbjct: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIQQNVFVG 180
Query: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK
Sbjct: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
Query: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
MDKFTIVSAIKACSIIQDLDSGKELHGFILR RLTSTEAMNALIDMYFINGRKNSALKTF
Sbjct: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRRRLTSTEAMNALIDMYFINGRKNSALKTF 300
Query: 301 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
NSMQSRDIISWNTVFGGLSDENDAKET+DLFGKF+LEGMKPNHITFSSLFRVCGVLLDCK
Sbjct: 301 NSMQSRDIISWNTVFGGLSDENDAKETVDLFGKFVLEGMKPNHITFSSLFRVCGVLLDCK 360
Query: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN
Sbjct: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
Query: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC
Sbjct: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
Query: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEK
Sbjct: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKL 540
Query: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF
Sbjct: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
Query: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI 660
EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATF SVISACAHFGLI
Sbjct: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFVSVISACAHFGLI 660
Query: 661 EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILR+LLS
Sbjct: 661 EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRTLLS 720
Query: 721 GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDRE 777
GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDRE
Sbjct: 721 GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDRE 776
BLAST of CmoCh04G013320 vs. NCBI nr
Match:
XP_023552977.1 (pentatricopeptide repeat-containing protein At4g13650-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1549.3 bits (4010), Expect = 0.0e+00
Identity = 767/788 (97.34%), Postives = 777/788 (98.60%), Query Frame = 0
Query: 1 MKASALGSGFVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
MKASALGSG VLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG
Sbjct: 1 MKASALGSGLVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENVKSFIFG 60
Query: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAEN 120
AQIHGHICKLGFTYDTFSMNNLVKMYCKCGF+CEGLKVFEEMP RNVVSWSLIISGAAEN
Sbjct: 61 AQIHGHICKLGFTYDTFSMNNLVKMYCKCGFLCEGLKVFEEMPLRNVVSWSLIISGAAEN 120
Query: 121 GEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
GEFEVCLETFLDMMR GLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG
Sbjct: 121 GEFEVCLETFLDMMRVGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVG 180
Query: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIK 240
GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEAL+AVSLLVSKGIK
Sbjct: 181 GSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALSAVSLLVSKGIK 240
Query: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAMNALIDMYFINGRKNSALKTF 300
MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTE MNAL+DMYFINGRKNSALKTF
Sbjct: 241 MDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEPMNALMDMYFINGRKNSALKTF 300
Query: 301 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
NSMQSRDIISWNTVFGG SDENDAKE ++LFGKFMLEGMKPNHITFSSLFRVCGVLLDCK
Sbjct: 301 NSMQSRDIISWNTVFGGFSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 360
Query: 361 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 420
LGFQFFSLAVHLGFL ESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAY+
Sbjct: 361 LGFQFFSLAVHLGFLYESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYS 420
Query: 421 LNSLDMEALRTFSSLGVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
LNS DMEALRTFSSLGVEANEYT+SIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC
Sbjct: 421 LNSFDMEALRTFSSLGVEANEYTYSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSC 480
Query: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP
Sbjct: 481 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 540
Query: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF
Sbjct: 541 DEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAF 600
Query: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLI 660
EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEK+RNANLQPSQATF SVISACAH GLI
Sbjct: 601 EKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLI 660
Query: 661 EQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
EQG SLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS
Sbjct: 661 EQGRSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLS 720
Query: 721 GCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKD 780
GCRIYGNRELG+WTAEKLLSLAPQNDAAFVLLSKVY+EGNSWEDAAKIRKGMTDREVLKD
Sbjct: 721 GCRIYGNRELGRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKD 780
Query: 781 PGYSRVET 789
PGYSRVET
Sbjct: 781 PGYSRVET 788
BLAST of CmoCh04G013320 vs. TAIR 10
Match:
AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 396.4 bits (1017), Expect = 5.5e-110
Identity = 229/723 (31.67%), Postives = 375/723 (51.87%), Query Frame = 0
Query: 71 GFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAENGEFEVCLETF 130
G D + ++ Y + G + + +F EM +VV+W+++ISG + G V +E F
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 131 LDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVGGSTLSMYARL 190
+M + + TLGSV+ A + G VH + KLG+ N++VG S +SMY++
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 191 GDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIKMDKFTIVSAI 250
+ +A VFE +++ + WNAMI GY + G + + + S G +D FT S +
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 251 KACSIIQDLDSGKELHGFILRHRLTSTEAM-NALIDMYFINGRKNSALKTFNSMQSRDII 310
C+ DL+ G + H I++ +L + NAL+DMY G A + F M RD +
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 311 SWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLA 370
+WNT+ G + + E DLF + L G+ + +S + C + G Q L+
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 371 VHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYNLNSLDMEAL 430
V G + SS++ M+++CG+++ VF SL + + N LI Y+ N+L+ EA+
Sbjct: 556 VKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAV 615
Query: 431 RTFSSL---GVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGS-NRYVSCSLMKC 490
F + GV +E T + I+E K E+ L Q H K GF S Y+ SL+
Sbjct: 616 VLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGM 675
Query: 491 YIIIGFLESSFEIFNELES-VDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFI 550
Y+ + + +F+EL S + W ++S EA F + PD+
Sbjct: 676 YMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQAT 735
Query: 551 LSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSG 610
++L CS ++ + +AIHSL + L ++ +ID YAKCGD+ + + F++
Sbjct: 736 FVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 795
Query: 611 ESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLIEQGH 670
++++ +NS+I YA +G A A+++F+ MR +++ P + TF V++AC+H G + G
Sbjct: 796 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGR 855
Query: 671 SLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRI 730
+F M +Y I D+ C+VD+L R G+L +A IE+ P + SLL CRI
Sbjct: 856 KIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRI 915
Query: 731 YGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKDPGYS 788
+G+ G+ +AEKL+ L PQN +A+VLLS +Y+ WE A +RK M DR V K PGYS
Sbjct: 916 HGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYS 975
BLAST of CmoCh04G013320 vs. TAIR 10
Match:
AT4G39530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 394.0 bits (1011), Expect = 2.7e-109
Identity = 239/764 (31.28%), Postives = 383/764 (50.13%), Query Frame = 0
Query: 33 DFP--VGRNNPQTIAAALSLSENVKSFIFGAQIHGHICKLGFTYDTFSMNNLVKMYCKCG 92
DFP +G + A L L + + +HG I G DT+ N L+ +Y + G
Sbjct: 34 DFPSTIGIRGRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAG 93
Query: 93 FMCEGLKVFEEMPHRNVVSWSLIISGAAENGEFEVCLETFLDMMRDGL-VPNEFTLGSVM 152
M KVFE+MP RN+VSWS ++S +G +E L FL+ R PNE+ L S +
Sbjct: 94 GMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI 153
Query: 153 KACADI-GACRF-GSSVHCLSWKLGIEQNVFVGGSTLSMYARLGDITSAKLVFEWMDKVD 212
+AC+ + G R+ + K G +++V+VG + Y + G+I A+LVF+ + +
Sbjct: 154 QACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS 213
Query: 213 VGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIKMDKFTIVSAIKACSIIQDLDSGKELHG 272
W MI G G +L L+ + D + + + + ACSI+ L+ GK++H
Sbjct: 214 TVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHA 273
Query: 273 FILRHRL-TSTEAMNALIDMYFINGRKNSALKTFNSMQSRDIISWNTVFGGLSDENDAKE 332
ILR+ L MN LID Y GR +A K FN M +++IISW T+ G KE
Sbjct: 274 HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE 333
Query: 333 TMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLDESSVVSSMLS 392
M+LF G+KP+ SS+ C L G Q + + ++S V +S++
Sbjct: 334 AMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLID 393
Query: 393 MFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYNLNSLDM---EALRTFSSLG---VEAN 452
M+A+C + VFD + +N +I Y+ EAL F + + +
Sbjct: 394 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPS 453
Query: 453 EYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRYVSCSLMKCYIIIGFLESSFEIFN 512
T ++ + + L +Q+H K G + + +L+ Y L+ S +F+
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFD 513
Query: 513 ELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSILNGCSSSAAYHQ 572
E++ D+ W ++ + V Q+ EA L S E+PDEF ++++ + A+
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQL 573
Query: 573 TKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYNSMIMAYA 632
+ H K G + ++ +A++D YAKCG A +AF+ S S D++ +NS+I +YA
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD-SAASRDVVCWNSVISSYA 633
Query: 633 HHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHFGLIEQGHSLFRTMKSEYNITPSR 692
+HG +A+Q+ EKM + ++P+ TF V+SAC+H GL+E G F M + I P
Sbjct: 634 NHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPET 693
Query: 693 DNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNRELGQWTAEKLLS 752
++Y C+V +L R G L AR +IE MP P + RSLLSGC GN EL + AE +
Sbjct: 694 EHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAIL 753
Query: 753 LAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREVLKDPGYS 785
P++ +F +LS +Y+ W +A K+R+ M V+K+PG S
Sbjct: 754 SDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRS 795
BLAST of CmoCh04G013320 vs. TAIR 10
Match:
AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 380.9 bits (977), Expect = 2.4e-105
Identity = 227/749 (30.31%), Postives = 384/749 (51.27%), Query Frame = 0
Query: 44 IAAALSLSENVKSFIFGAQIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEM- 103
I+ ALS S N+ +IH + LG F L+ Y L VF +
Sbjct: 10 ISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 69
Query: 104 PHRNVVSWSLIISGAAENGEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGS 163
P +NV W+ II ++NG F LE + + + P+++T SV+KACA + G
Sbjct: 70 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 129
Query: 164 SVHCLSWKLGIEQNVFVGGSTLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCG 223
V+ +G E ++FVG + + MY+R+G +T A+ VF+ M D+ WN++I GY++ G
Sbjct: 130 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 189
Query: 224 HGLEALNAVSLLVSKGIKMDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAM-N 283
+ EAL L + I D FT+ S + A + + G+ LHGF L+ + S + N
Sbjct: 190 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 249
Query: 284 ALIDMYFINGRKNSALKTFNSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKP 343
L+ MY R A + F+ M RD +S+NT+ G +E++ +F + L+ KP
Sbjct: 250 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKP 309
Query: 344 NHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVF 403
+ +T SS+ R CG L D L ++ + GF+ ES+V + ++ ++A+CG M VF
Sbjct: 310 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 369
Query: 404 DSLVFKPISAWNQLILAYNLNSLDMEALRTFSSLGV---EANEYTHSIIIETACKSENPW 463
+S+ K +WN +I Y + MEA++ F + + +A+ T+ ++I + + +
Sbjct: 370 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 429
Query: 464 LCRQLHCASLKAGFGSNRYVSCSLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALV 523
+ LH +K+G + VS +L+ Y G + S +IF+ + + D TW VISA V
Sbjct: 430 FGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACV 489
Query: 524 HQNHTYEAFMFLNVLMESDEKPDEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVH 583
+ +S+ PD L C+S AA K IH + G+ +
Sbjct: 490 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 549
Query: 584 VASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNA 643
+ +A+I+ Y+KCG + ++ R FE+ D++ + MI AY +G +A++ F M +
Sbjct: 550 IGNALIEMYSKCGCLENSSRVFERMSR-RDVVTWTGMIYAYGMYGEGEKALETFADMEKS 609
Query: 644 NLQPSQATFASVISACAHFGLIEQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYD 703
+ P F ++I AC+H GL+++G + F MK+ Y I P ++Y C+VD+LSR+ +
Sbjct: 610 GIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 669
Query: 704 ARYVIESMPFSPWPAILRSLLSGCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSE 763
A I++MP P +I S+L CR G+ E + + +++ L P + +L S Y+
Sbjct: 670 AEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAA 729
Query: 764 GNSWEDAAKIRKGMTDREVLKDPGYSRVE 788
W+ + IRK + D+ + K+PGYS +E
Sbjct: 730 LRKWDKVSLIRKSLKDKHITKNPGYSWIE 753
BLAST of CmoCh04G013320 vs. TAIR 10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 376.7 bits (966), Expect = 4.5e-104
Identity = 210/730 (28.77%), Postives = 371/730 (50.82%), Query Frame = 0
Query: 62 QIHGHICKLGFTYDTFSMNNLVKMYCKCGFMCEGLKVFEEMPHRNVVSWSLIISGAAENG 121
QIH I G T N L+ +Y + GF+ +VF+ + ++ SW +ISG ++N
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 122 EFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIGACRFGSSVHCLSWKLGIEQNVFVGG 181
+ F DM G++P + SV+ AC I + G +H L KLG + +V
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 182 STLSMYARLGDITSAKLVFEWMDKVDVGCWNAMIGGYTNCGHGLEALNAVSLLVSKGIKM 241
+ +S+Y LG++ SA+ +F M + D +N +I G + CG+G +A+ + G++
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 242 DKFTIVSAIKACSIIQDLDSGKELHGFILRHRLTSTEAM-NALIDMYFINGRKNSALKTF 301
D T+ S + ACS L G++LH + + S + AL+++Y +AL F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 302 NSMQSRDIISWNTVFGGLSDENDAKETMDLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 361
+ +++ WN + +D + + +F + +E + PN T+ S+ + C L D +
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 362 LGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYN 421
LG Q S + F + V S ++ M+A+ G ++ + K + +W +I Y
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 422 LNSLDMEALRTFSSL---GVEANEYTHSIIIETACKSENPWLCRQLHCASLKAGFGSNRY 481
+ D +AL TF + G+ ++E + + + +Q+H + +GF S+
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 482 VSCSLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESD 541
+L+ Y G +E S+ F + E+ D W A++S + EA +
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 687
Query: 542 EKPDEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQ 601
+ F S + S +A Q K +H++ K G+ V +A+I YAKCG I A+
Sbjct: 688 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 747
Query: 602 RAFEKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKMRNANLQPSQATFASVISACAHF 661
+ F + N+ + +N++I AY+ HG +A+ F++M ++N++P+ T V+SAC+H
Sbjct: 748 KQFLEVSTKNE-VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 807
Query: 662 GLIEQGHSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRS 721
GL+++G + F +M SEY ++P ++Y C+VDML+R G L A+ I+ MP P + R+
Sbjct: 808 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 867
Query: 722 LLSGCRIYGNRELGQWTAEKLLSLAPQNDAAFVLLSKVYSEGNSWEDAAKIRKGMTDREV 781
LLS C ++ N E+G++ A LL L P++ A +VLLS +Y+ W+ R+ M ++ V
Sbjct: 868 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 927
Query: 782 LKDPGYSRVE 788
K+PG S +E
Sbjct: 928 KKEPGQSWIE 936
BLAST of CmoCh04G013320 vs. TAIR 10
Match:
AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 369.4 bits (947), Expect = 7.2e-102
Identity = 218/757 (28.80%), Postives = 384/757 (50.73%), Query Frame = 0
Query: 39 NNP-QTIAAALSLSENVKSFIFGAQIHGHICKLGFTYD-TFSMNNLVKMYCKCGFMCEGL 98
N+P + A L L ++ G Q+H I K +++ F LV MY KCG + +
Sbjct: 77 NSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAE 136
Query: 99 KVFEEMPHRNVVSWSLIISGAAENGEFEVCLETFLDMMRDGLVPNEFTLGSVMKACADIG 158
KVF+EMP R +W+ +I NGE L + +M +G+ + +++KACA +
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 159 ACRFGSSVHCLSWKLGIEQNVFVGGSTLSMYARLGDITSAKLVFE-WMDKVDVGCWNAMI 218
R GS +H L KLG F+ + +SMYA+ D+++A+ +F+ + +K D WN+++
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 219 GGYTNCGHGLEALNAVSLLVSKGIKMDKFTIVSAIKACSIIQDLDSGKELHGFILRHRLT 278
Y+ G LE L + G + +TIVSA+ AC GKE+H +L+
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 279 STE--AMNALIDMYFINGRKNSALKTFNSMQSRDIISWNTVFGGLSDENDAKETMDLFGK 338
S+E NALI MY G+ A + M + D+++WN++ G KE ++ F
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 339 FMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLDESSVVSSMLSMFAQCGL 398
+ G K + ++ +S+ G L + G + + + G+ V ++++ M+++C L
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 399 MEMVLSVFDSLVFKPISAWNQLILAYNLNSLDMEALRTFSSLG---VEANEYTHSIIIET 458
+ F + K + +W +I Y N +EAL F + +E +E I+
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 459 ACKSENPWLCRQLHCASLKAGFGSNRYVSCSLMKCYIIIGFLESSFEIFNELESVDMATW 518
+ ++ + +++HC L+ G + + L+ Y + + +F ++ D+ +W
Sbjct: 497 SSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSW 556
Query: 519 GAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSILNGCSSSAAYHQTKAIHSLAEK 578
++IS+ + EA ++E+ D L IL+ +S +A ++ + IH +
Sbjct: 557 TSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLR 616
Query: 579 MGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYNSMIMAYAHHGLAWQAIQ 638
GF L +A A++D YA CGD+ SA+ F++ E ++ Y SMI AY HG A++
Sbjct: 617 KGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI-ERKGLLQYTSMINAYGMHGCGKAAVE 676
Query: 639 VFEKMRNANLQPSQATFASVISACAHFGLIEQGHSLFRTMKSEYNITPSRDNYGCLVDML 698
+F+KMR+ N+ P +F +++ AC+H GL+++G + M+ EY + P ++Y CLVDML
Sbjct: 677 LFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDML 736
Query: 699 SRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNRELGQWTAEKLLSLAPQNDAAFV 758
R + +A ++ M P + +LL+ CR + +E+G+ A++LL L P+N V
Sbjct: 737 GRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLV 796
Query: 759 LLSKVYSEGNSWEDAAKIRKGMTDREVLKDPGYSRVE 788
L+S V++E W D K+R M + K PG S +E
Sbjct: 797 LVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 831
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SS83 | 7.8e-109 | 31.67 | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... | [more] |
Q9SVA5 | 3.9e-108 | 31.28 | Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX... | [more] |
Q9SS60 | 3.4e-104 | 30.31 | Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... | [more] |
Q9SVP7 | 6.4e-103 | 28.77 | Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... | [more] |
Q9M1V3 | 1.0e-100 | 28.80 | Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GWK5 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At4g39530-like isoform X1 OS=Cucurbi... | [more] |
A0A6J1KBN1 | 0.0e+00 | 97.59 | pentatricopeptide repeat-containing protein At4g39530-like isoform X1 OS=Cucurbi... | [more] |
A0A6J1KI91 | 0.0e+00 | 93.53 | pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like isofor... | [more] |
A0A6J1GYT5 | 0.0e+00 | 91.12 | pentatricopeptide repeat-containing protein At4g13650-like isoform X2 OS=Cucurbi... | [more] |
A0A1S3BDR3 | 0.0e+00 | 82.55 | pentatricopeptide repeat-containing protein At4g13650-like isoform X1 OS=Cucumis... | [more] |
Match Name | E-value | Identity | Description | |
XP_022956358.1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At4g39530-like isoform X1 [Cucurbita... | [more] |
KAG6601062.1 | 0.0e+00 | 98.73 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022998951.1 | 0.0e+00 | 97.59 | pentatricopeptide repeat-containing protein At4g39530-like isoform X1 [Cucurbita... | [more] |
KAG7031872.1 | 0.0e+00 | 99.10 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_023552977.1 | 0.0e+00 | 97.34 | pentatricopeptide repeat-containing protein At4g13650-like [Cucurbita pepo subsp... | [more] |
Match Name | E-value | Identity | Description | |
AT3G09040.1 | 5.5e-110 | 31.67 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G39530.1 | 2.7e-109 | 31.28 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G03580.1 | 2.4e-105 | 30.31 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G13650.1 | 4.5e-104 | 28.77 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G63370.1 | 7.2e-102 | 28.80 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |