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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAACAAGTATCCTGGCATGTCTCGTGGTGCAGTTGCATTCCAGATAGCTCCTCTACTCTCCCCCAGGTTTTGTTCTTAGAAAAAAAATTTCAATTCTTTTGTTATAATTCTTATGATTATTCCTCACCTGTTCCAAGCCCTTTCCTTCCAGCACAAGATTCTTTATGTATGTACAATTGAGCTTGGTGCTTTTGTAGCTATATAGAAATAGGTCTTCCTGTGGATTTGCTGTTGATTCAAGCTGTGAATGTATACACTTTGAATTGCAAAAGCTTTCAAGCATTCTTACACCACCACCACCTCCGCCGCCGCCGCCGGCCGCCTATGCCTTCTGCATTTTCATTCTTTTTAGTTCTCAGCAATGA mRNA sequence ATGAAACAAGTATCCTGGCATGTCTCGTGGTGCAGTTGCATTCCAGATAGCTCCTCTACTCTCCCCCAGGTTTTGTTCTTAGAAAAAAAATTTCAATTCTTTTGTTATAATTCTTATGATTATTCCTCACCTGTTCCAAGCCCTTTCCTTCCAGCACAAGATTCTTTATGTATCTGTGAATGTATACACTTTGAATTGCAAAAGCTTTCAAGCATTCTTACACCACCACCACCTCCGCCGCCGCCGCCGGCCGCCTATGCCTTCTGCATTTTCATTCTTTTTAGTTCTCAGCAATGA Coding sequence (CDS) ATGAAACAAGTATCCTGGCATGTCTCGTGGTGCAGTTGCATTCCAGATAGCTCCTCTACTCTCCCCCAGGTTTTGTTCTTAGAAAAAAAATTTCAATTCTTTTGTTATAATTCTTATGATTATTCCTCACCTGTTCCAAGCCCTTTCCTTCCAGCACAAGATTCTTTATGTATCTGTGAATGTATACACTTTGAATTGCAAAAGCTTTCAAGCATTCTTACACCACCACCACCTCCGCCGCCGCCGCCGGCCGCCTATGCCTTCTGCATTTTCATTCTTTTTAGTTCTCAGCAATGA Protein sequence MKQVSWHVSWCSCIPDSSSTLPQVLFLEKKFQFFCYNSYDYSSPVPSPFLPAQDSLCICECIHFELQKLSSILTPPPPPPPPPAAYAFCIFILFSSQQ
Homology
BLAST of CmoCh04G013070 vs. NCBI nr
Match: KAG6601038.1 (Serine/threonine-protein kinase PBS1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 102.4 bits (254), Expect = 2.2e-18 Identity = 57/86 (66.28%), Postives = 59/86 (68.60%), Query Frame = 0 Query: 13 CIPDSSSTLPQVLFLEKKFQFFCYNSYDYSSPVPSPFLPAQDSLCICECIHFELQKLSSI 72 CIPDSSSTLPQ+ Y + P F A DS CECIHFELQKLSSI Sbjct: 290 CIPDSSSTLPQL----------------YRNRSPCGF--AVDS--SCECIHFELQKLSSI 349
Query: 73 LTPPPPPPPPPAAYAFCIFILFSSQQ 99 LTPPPPPPPPPAAYAFCIFILFSSQQ Sbjct: 350 LTPPPPPPPPPAAYAFCIFILFSSQQ 355
BLAST of CmoCh04G013070 vs. NCBI nr
Match: KAG7031848.1 (Serine/threonine-protein kinase PBL27, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 85.1 bits (209), Expect = 3.6e-13 Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 0 Query: 59 CECIHFELQKLSSILT-PPPPPPPPPAAYAFCIFILFSSQQ 99 CECIHFELQKLSSILT PPPPPPPPPAAYAFCIFILFSSQQ Sbjct: 458 CECIHFELQKLSSILTPPPPPPPPPPAAYAFCIFILFSSQQ 498
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6601038.1 | 2.2e-18 | 66.28 | Serine/threonine-protein kinase PBS1, partial [Cucurbita argyrosperma subsp. sor... | [more] |
KAG7031848.1 | 3.6e-13 | 97.56 | Serine/threonine-protein kinase PBL27, partial [Cucurbita argyrosperma subsp. ar... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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