CmoCh04G012790 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G012790
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
LocationCmo_Chr04: 6485651 .. 6486760 (+)
RNA-Seq ExpressionCmoCh04G012790
SyntenyCmoCh04G012790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGAAGATTCAAGTGACACTAGTGTTGGCGAGCAAGAAGTGACTCAACCAAGCGAGCCTAGTGAAAATGAAATGACACCTCAACAACTCAGACATTCAGAAATAATCCTAAAGGAAAATCTAGAGTATGCCAACGCAGTAGAAGACGAAGTTAATGAGCCAGAGATATATGAAGAAGCATCACAAAACTCAGCTTGGCAGAAAGCAATGGAGGAAGAAACTATAGCCCTAGAACAAAATCAGACTTGGGAATTAGTGTCAAGACCAAGAGATACCAAACTCATCTCTTGCAAGTGGGCTTACGAAATAATGTGTACCCCGGATGGATCAATCGTGAGATACAAAGCTCAGACTATAGATTCAGGGTTCTCTCAAGAATATGGACTAGATTATGATGAAACGATTAGGCCAGTGGCAAAGATCATTATCGTACAAGTTCCTCCAGTACTTACGGTAAATAAAGATTGGAAATTATGGCAGATGGATATGAATAATGCTTTCTTGCAGGGAGAGTTAAACAGAGAGTTCTACATGGACCAACCGAAAAAATTCGAAAATGAAGTTGGAGTCTTTGATCAATATATGCAAAATCTGAAGAAGCCTTATTTAGATACAGCTCGACCGACCTTAAGATATGTCAAAGGAGACCACGATACCCGAAGATCAATCACTGGGTATGTGTTCAAGCTCGGTTCAAGAACAATTTTTTGGTGTAACAAAAGACAACAAACAATATCATTGTCAACTAAAGAAGCAGAGTACAGAGCAGCAGCTGGAGCAACTCAGGAAAATACATGCTTAAAACTTTTGATGGAAGATTGGCACCAGAAAATTGAGTATCCAATACCACTTTATTGCAACAATCAATCTGCGATTCGCCTTGCAGAAAATCCGGTGTTTCATGCTAGAACAAAGCATGTGGAGGTGCACAACCACTTCATTAGAGAGAAGGTCCTAAAGGAAGAGATCAAGATGCAGCAAATCAAGACAGATGTCCAAGTGGCAGACTTGTTTACAAAAGGGCTGAATACTGGCAAACATGAGAGTTTTCGCTGTCACCTCAACATGGTGCAGCGAATGAGGACTAGTGCTGAGGGGGAGTGTTGA

mRNA sequence

ATGCCTGAAGATTCAAGTGACACTAGTGTTGGCGAGCAAGAAGTGACTCAACCAAGCGAGCCTAGTGAAAATGAAATGACACCTCAACAACTCAGACATTCAGAAATAATCCTAAAGGAAAATCTAGAGTATGCCAACGCAGTAGAAGACGAAGTTAATGAGCCAGAGATATATGAAGAAGCATCACAAAACTCAGCTTGGCAGAAAGCAATGGAGGAAGAAACTATAGCCCTAGAACAAAATCAGACTTGGGAATTAGTGTCAAGACCAAGAGATACCAAACTCATCTCTTGCAAGTGGGCTTACGAAATAATGTGTACCCCGGATGGATCAATCGTGAGATACAAAGCTCAGACTATAGATTCAGGGTTCTCTCAAGAATATGGACTAGATTATGATGAAACGATTAGGCCAGTGGCAAAGATCATTATCGTACAAGTTCCTCCAGTACTTACGGTAAATAAAGATTGGAAATTATGGCAGATGGATATGAATAATGCTTTCTTGCAGGGAGAGTTAAACAGAGAGTTCTACATGGACCAACCGAAAAAATTCGAAAATGAAGTTGGAGTCTTTGATCAATATATGCAAAATCTGAAGAAGCCTTATTTAGATACAGCTCGACCGACCTTAAGATATGTCAAAGGAGACCACGATACCCGAAGATCAATCACTGGGTATGTGTTCAAGCTCGGTTCAAGAACAATTTTTTGGTGTAACAAAAGACAACAAACAATATCATTGTCAACTAAAGAAGCAGAGTACAGAGCAGCAGCTGGAGCAACTCAGGAAAATACATGCTTAAAACTTTTGATGGAAGATTGGCACCAGAAAATTGAGTATCCAATACCACTTTATTGCAACAATCAATCTGCGATTCGCCTTGCAGAAAATCCGGTGTTTCATGCTAGAACAAAGCATGTGGAGGTGCACAACCACTTCATTAGAGAGAAGGTCCTAAAGGAAGAGATCAAGATGCAGCAAATCAAGACAGATGTCCAAGTGGCAGACTTGTTTACAAAAGGGCTGAATACTGGCAAACATGAGAGTTTTCGCTGTCACCTCAACATGGTGCAGCGAATGAGGACTAGTGCTGAGGGGGAGTGTTGA

Coding sequence (CDS)

ATGCCTGAAGATTCAAGTGACACTAGTGTTGGCGAGCAAGAAGTGACTCAACCAAGCGAGCCTAGTGAAAATGAAATGACACCTCAACAACTCAGACATTCAGAAATAATCCTAAAGGAAAATCTAGAGTATGCCAACGCAGTAGAAGACGAAGTTAATGAGCCAGAGATATATGAAGAAGCATCACAAAACTCAGCTTGGCAGAAAGCAATGGAGGAAGAAACTATAGCCCTAGAACAAAATCAGACTTGGGAATTAGTGTCAAGACCAAGAGATACCAAACTCATCTCTTGCAAGTGGGCTTACGAAATAATGTGTACCCCGGATGGATCAATCGTGAGATACAAAGCTCAGACTATAGATTCAGGGTTCTCTCAAGAATATGGACTAGATTATGATGAAACGATTAGGCCAGTGGCAAAGATCATTATCGTACAAGTTCCTCCAGTACTTACGGTAAATAAAGATTGGAAATTATGGCAGATGGATATGAATAATGCTTTCTTGCAGGGAGAGTTAAACAGAGAGTTCTACATGGACCAACCGAAAAAATTCGAAAATGAAGTTGGAGTCTTTGATCAATATATGCAAAATCTGAAGAAGCCTTATTTAGATACAGCTCGACCGACCTTAAGATATGTCAAAGGAGACCACGATACCCGAAGATCAATCACTGGGTATGTGTTCAAGCTCGGTTCAAGAACAATTTTTTGGTGTAACAAAAGACAACAAACAATATCATTGTCAACTAAAGAAGCAGAGTACAGAGCAGCAGCTGGAGCAACTCAGGAAAATACATGCTTAAAACTTTTGATGGAAGATTGGCACCAGAAAATTGAGTATCCAATACCACTTTATTGCAACAATCAATCTGCGATTCGCCTTGCAGAAAATCCGGTGTTTCATGCTAGAACAAAGCATGTGGAGGTGCACAACCACTTCATTAGAGAGAAGGTCCTAAAGGAAGAGATCAAGATGCAGCAAATCAAGACAGATGTCCAAGTGGCAGACTTGTTTACAAAAGGGCTGAATACTGGCAAACATGAGAGTTTTCGCTGTCACCTCAACATGGTGCAGCGAATGAGGACTAGTGCTGAGGGGGAGTGTTGA

Protein sequence

MPEDSSDTSVGEQEVTQPSEPSENEMTPQQLRHSEIILKENLEYANAVEDEVNEPEIYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETIRPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENEVGVFDQYMQNLKKPYLDTARPTLRYVKGDHDTRRSITGYVFKLGSRTIFWCNKRQQTISLSTKEAEYRAAAGATQENTCLKLLMEDWHQKIEYPIPLYCNNQSAIRLAENPVFHARTKHVEVHNHFIREKVLKEEIKMQQIKTDVQVADLFTKGLNTGKHESFRCHLNMVQRMRTSAEGEC
Homology
BLAST of CmoCh04G012790 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.7e-29
Identity = 129/557 (23.16%), Postives = 206/557 (36.98%), Query Frame = 0

Query: 12   EQEVTQPSEPSENEMTPQQLRHSEIILKENLEYANA----VEDEVNEPEIYEEA---SQN 71
            ++ V +   P++ E   Q LR SE    E+  Y +     + D+  EPE  +E     + 
Sbjct: 765  DEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDD-REPESLKEVLSHPEK 824

Query: 72   SAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGF 131
            +   KAM+EE  +L++N T++LV  P+  + + CKW +++    D  +VRYKA+ +  GF
Sbjct: 825  NQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGF 884

Query: 132  SQEYGLDYDETIRPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKK 191
             Q+ G+D+DE   PV K+  ++    L  + D ++ Q+D+  AFL G+L  E YM+QP+ 
Sbjct: 885  EQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEG 944

Query: 192  FE---------------------------------------------------------- 251
            FE                                                          
Sbjct: 945  FEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFI 1004

Query: 252  ------------------------------------------------------------ 311
                                                                        
Sbjct: 1005 ILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQE 1064

Query: 312  ------------------------------------------------------------ 350
                                                                        
Sbjct: 1065 KYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMV 1124

BLAST of CmoCh04G012790 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 119.4 bits (298), Expect = 8.6e-26
Identity = 126/552 (22.83%), Postives = 192/552 (34.78%), Query Frame = 0

Query: 22   SENEMTPQQLRHSEIILKENLEYANA---VEDEVNEPEIYEEASQNSAWQKAMEEETIAL 81
            SE   T  Q+ ++E     N    NA     D  N  +  +     S+W++A+  E  A 
Sbjct: 858  SERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAH 917

Query: 82   EQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETIRP 141
            + N TW +  RP +  ++  +W + +     G+ +RYKA+ +  GF+Q+Y +DY+ET  P
Sbjct: 918  KINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAP 977

Query: 142  VAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQP---------------- 201
            VA+I   +    L +  + K+ QMD+  AFL G L  E YM  P                
Sbjct: 978  VARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCKLNKA 1037

Query: 202  ------------------------------------------------------------ 261
                                                                        
Sbjct: 1038 IYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGD 1097

Query: 262  ------------KKFE----NEVGVFD--------------------------------- 321
                        +KF     NE+  F                                  
Sbjct: 1098 MTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNA 1157

Query: 322  -------------------------------QYMQNLKKPYLDTA--------------- 367
                                            Y+    +P L TA               
Sbjct: 1158 VSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSEL 1217

BLAST of CmoCh04G012790 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-25
Identity = 116/531 (21.85%), Postives = 180/531 (33.90%), Query Frame = 0

Query: 32   RHSEIILKENLEYANAVEDEVN-EPEIYEEASQNSAWQKAMEEETIALEQNQTWELV-SR 91
            R  + I K N +Y+ A     N EP    +A ++  W++AM  E  A   N TW+LV   
Sbjct: 915  RAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPP 974

Query: 92   PRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETIRPVAKIIIVQVPP 151
            P    ++ C+W +      DGS+ RYKA+ +  G++Q  GLDY ET  PV K   +++  
Sbjct: 975  PPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVL 1034

Query: 152  VLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKF------------------------ 211
             + V++ W + Q+D+NNAFLQG L  E YM QP  F                        
Sbjct: 1035 GVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1094

Query: 212  ------------------------------------------------------------ 271
                                                                        
Sbjct: 1095 AWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDAL 1154

Query: 272  -------ENE-------------------------------------------------- 331
                   E+E                                                  
Sbjct: 1155 SQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKL 1214

Query: 332  ----------------------------------VGVFDQYMQNLKKPYLDTARPTLRYV 360
                                              V    QYM      + +  +  LRY+
Sbjct: 1215 TLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYL 1274

BLAST of CmoCh04G012790 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.5e-25
Identity = 112/526 (21.29%), Postives = 177/526 (33.65%), Query Frame = 0

Query: 37   ILKENLEYANAVE-DEVNEPEIYEEASQNSAWQKAMEEETIALEQNQTWELV-SRPRDTK 96
            I+K N +Y+ AV     +EP    +A ++  W+ AM  E  A   N TW+LV   P    
Sbjct: 937  IIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVT 996

Query: 97   LISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETIRPVAKIIIVQVPPVLTVN 156
            ++ C+W +      DGS+ RYKA+ +  G++Q  GLDY ET  PV K   +++   + V+
Sbjct: 997  IVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVD 1056

Query: 157  KDWKLWQMDMNNAFLQGELNREFYMDQPKKFENE-------------------------- 216
            + W + Q+D+NNAFLQG L  + YM QP  F ++                          
Sbjct: 1057 RSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVE 1116

Query: 217  ------------------------------------------------------------ 276
                                                                        
Sbjct: 1117 LRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFS 1176

Query: 277  ------------------------------------------------------------ 336
                                                                        
Sbjct: 1177 VKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSG 1236

Query: 337  -----------------------------VGVFDQYMQNLKKPYLDTARPTLRYV----- 360
                                         V    Q+M    + +L   +  LRY+     
Sbjct: 1237 TKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPN 1296

BLAST of CmoCh04G012790 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.4e-06
Identity = 24/49 (48.98%), Postives = 36/49 (73.47%), Query Frame = 0

Query: 216 GDHDTRRSITGYVFKLGSRTIFWCNKRQQTISLSTKEAEYRAAAGATQE 265
           GD ++RRS +GY+FKL    + W +K+Q+T++LS+ E EY A + ATQE
Sbjct: 81  GDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSEATQE 129

BLAST of CmoCh04G012790 vs. ExPASy TrEMBL
Match: A0A6A3AIG6 (PLAC8 family protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110458pilonHSYRG00590 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 6.9e-103
Identity = 226/482 (46.89%), Postives = 272/482 (56.43%), Query Frame = 0

Query: 13   QEVTQPSEPSENEMT-PQ-QLRHSEIILKENLEYAN-AVEDEVNEPEIYEEASQNSAWQK 72
            Q+  +   PSE E + PQ QLR S  I + N +YAN A+ +EV E E +EEASQ+S W  
Sbjct: 625  QQPNEEGGPSETEESIPQSQLRRSTRIRRSNPKYANAAIIEEVTESETFEEASQSSEWMT 684

Query: 73   AMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYG 132
            AM+EE  AL+QNQTW+LV + +D K ISCKW Y+I   PDGSI RYKA+ +  GFSQ+YG
Sbjct: 685  AMKEEIDALQQNQTWDLVPKIKDVKPISCKWVYKIKRHPDGSIERYKARLVAYGFSQQYG 744

Query: 133  LDYDETIRPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFEN-- 192
            LDYDET  PVAK+  V+V  VL  NKDW LWQMD+ NAFL GEL+RE YM QP  F++  
Sbjct: 745  LDYDETFSPVAKLTTVRVLLVLAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQD 804

Query: 193  ------------------------------------------------------------ 252
                                                                        
Sbjct: 805  HSEYMCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEVRFQMKELGQ 864

Query: 253  ----------------------------------EVGVFDQYMQNLKKPYLDTARPTLRY 312
                                              E G+  +YMQN KKP+L+  R  LRY
Sbjct: 865  LKHFLGLEVDRTHEGIFLCQQKYAKDLLKRFGMLEFGMMSRYMQNPKKPHLEAVRRILRY 924

Query: 313  VK--------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQQTIS 370
            VK                          GDHDTRRS TGYVFKLGSRTI WC+KRQ T+S
Sbjct: 925  VKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFKLGSRTISWCSKRQPTVS 984

BLAST of CmoCh04G012790 vs. ExPASy TrEMBL
Match: A0A6A2WZM7 (Tir-nbs resistance protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112429pilonHSYRG00068 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 5.8e-102
Identity = 220/450 (48.89%), Postives = 265/450 (58.89%), Query Frame = 0

Query: 4    DSSDTSVGEQEVTQPSEPSEN--------EMTPQQLRHSEIILKENLEYANA-VEDEVNE 63
            D     +GE +V   +   E+        E    Q   S  I + N +YANA + ++  E
Sbjct: 1029 DKLQQKMGEHDVQLQTSSDESKDPNGDDVEQRVTQNPWSIRIRRPNPKYANATIIEDATE 1088

Query: 64   PEIYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVR 123
            PE +EEAS++S W  AM+EE  AL+QNQTW++V + +D K ISCKW Y+I   PDGSI R
Sbjct: 1089 PETFEEASKSSEWMTAMKEEIDALQQNQTWDIVPKIKDVKPISCKWVYKIKRRPDGSIER 1148

Query: 124  YKAQTIDSGFSQEYGLDYDETIRPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELN 183
            YKA+ +  GFSQ+YGLDYDET  PVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+
Sbjct: 1149 YKARLVARGFSQQYGLDYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELD 1208

Query: 184  REFYMDQPKKF------------------------------------------------- 243
            RE YM QP +                                                  
Sbjct: 1209 REIYMTQPIQSQDHPEYVCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVK 1268

Query: 244  ENEVGVFDQYMQNLKKPYLDTARPTLRYVK--------------------------GDHD 303
            +NEVGV   YMQN KKP+L+  R  LRYV                           GDHD
Sbjct: 1269 DNEVGVMSWYMQNPKKPHLEVVRRILRYVNNTIDYGLLYKKGEDCKLVGYCDADYAGDHD 1328

Query: 304  TRRSITGYVFKLGSRTIFWCNKRQQTISLSTKEAEYRAAAGATQENTCLKLLMEDWHQKI 363
            TRRS TGYVFKLGS TI WC KRQ T+SLST EAEYRAAA A QE+T L  LM + HQ +
Sbjct: 1329 TRRSTTGYVFKLGSGTISWCRKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPV 1388

Query: 364  EYPIPLYCNNQSAIRLAENPVFHARTKHVEVHNHFIREKVLKEEIKMQQIKTDVQVADLF 370
            +Y I LYC+NQS IRLAENPVFHARTKHVEVH HF+REKVL+EEI+M+QIKTD Q+ADLF
Sbjct: 1389 DYAISLYCDNQSTIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLF 1448

BLAST of CmoCh04G012790 vs. ExPASy TrEMBL
Match: A0A2N9HDK6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23021 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 2.7e-99
Identity = 223/480 (46.46%), Postives = 261/480 (54.37%), Query Frame = 0

Query: 8    TSVGEQEVTQPSEPSENEMTPQ-QLRHSEIILKENLEYANAV---EDEVNEPEIYEEASQ 67
            T V +Q   +       E+TPQ QLR S    + N +YANA    E  + EPE +EEASQ
Sbjct: 804  TGVYQQPNEEGGPTETEELTPQSQLRRSTRTRRPNPKYANAAIVEEATIIEPETFEEASQ 863

Query: 68   NSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSG 127
            +S W KAMEEE  AL+QNQTW+L+ +PRD K ISCKW Y+I   PDGSI RYKA+ +  G
Sbjct: 864  SSEWMKAMEEEIHALKQNQTWDLMPKPRDVKPISCKWVYKIKRRPDGSIERYKARLVARG 923

Query: 128  FSQEYGLDYDETIRPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPK 187
            FSQ+YGLDYDET  PVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+RE YM QP 
Sbjct: 924  FSQQYGLDYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMIQPM 983

Query: 188  KFENE------------------------------------------------------- 247
             F+N+                                                       
Sbjct: 984  GFQNQDHPEYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVTPADTSLFVKANEGKLA 1043

Query: 248  ------------------------------------------VGVFDQYMQNLKKPYLDT 307
                                                      V V  +YMQN KKP+L+ 
Sbjct: 1044 IVLVYVDDLVITGDDEEEILRTKENLSVRFQMKELGQLKHFLVSVMSRYMQNPKKPHLEA 1103

Query: 308  ARPTLRYVK--------------------------GDHDTRRSITGYVFKLGSRTIFWCN 361
             R  LRYVK                          GDHDTRRS TGYVFKLGS TI WC+
Sbjct: 1104 VRRILRYVKSTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFKLGSGTISWCS 1163

BLAST of CmoCh04G012790 vs. ExPASy TrEMBL
Match: A0A2N9ELW1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7729 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 2.7e-99
Identity = 223/480 (46.46%), Postives = 261/480 (54.37%), Query Frame = 0

Query: 8    TSVGEQEVTQPSEPSENEMTPQ-QLRHSEIILKENLEYANAV---EDEVNEPEIYEEASQ 67
            T V +Q   +       E+TPQ QLR S    + N +YANA    E  + EPE +EEASQ
Sbjct: 775  TGVYQQPNEEGGPTETEELTPQSQLRRSTRTRRPNPKYANAAIVEEATIIEPETFEEASQ 834

Query: 68   NSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSG 127
            +S W KAMEEE  AL+QNQTW+L+ +PRD K ISCKW Y+I   PDGSI RYKA+ +  G
Sbjct: 835  SSEWMKAMEEEIHALKQNQTWDLMPKPRDVKPISCKWVYKIKRRPDGSIERYKARLVARG 894

Query: 128  FSQEYGLDYDETIRPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPK 187
            FSQ+YGLDYDET  PVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+RE YM QP 
Sbjct: 895  FSQQYGLDYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMIQPM 954

Query: 188  KFENE------------------------------------------------------- 247
             F+N+                                                       
Sbjct: 955  GFQNQDHPEYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVTPADTSLFVKANEGKLA 1014

Query: 248  ------------------------------------------VGVFDQYMQNLKKPYLDT 307
                                                      V V  +YMQN KKP+L+ 
Sbjct: 1015 IVLVYVDDLVITGDDEEEILRTKENLSVRFQMKELGQLKHFLVSVMSRYMQNPKKPHLEA 1074

Query: 308  ARPTLRYVK--------------------------GDHDTRRSITGYVFKLGSRTIFWCN 361
             R  LRYVK                          GDHDTRRS TGYVFKLGS TI WC+
Sbjct: 1075 VRRILRYVKSTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFKLGSGTISWCS 1134

BLAST of CmoCh04G012790 vs. ExPASy TrEMBL
Match: A0A2N9GCM1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25011 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 4.6e-99
Identity = 223/480 (46.46%), Postives = 261/480 (54.37%), Query Frame = 0

Query: 8    TSVGEQEVTQPSEPSENEMTPQ-QLRHSEIILKENLEYANAV---EDEVNEPEIYEEASQ 67
            T V +Q   +       E+TPQ QLR S    + N +YANA    E  + EPE +EEASQ
Sbjct: 781  TGVYQQPNEEGGPTETEELTPQSQLRRSTRTRRPNPKYANAAIVEEATIIEPETFEEASQ 840

Query: 68   NSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSG 127
            +S W KAMEEE  AL+QNQTW+L+ +PRD K ISCKW Y+I   PDGSI RYKA+ +  G
Sbjct: 841  SSEWMKAMEEEIHALKQNQTWDLMPKPRDVKPISCKWVYKIKRRPDGSIERYKARLVARG 900

Query: 128  FSQEYGLDYDETIRPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPK 187
            FSQ+YGLDYDET  PVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+RE YM QP 
Sbjct: 901  FSQQYGLDYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMIQPM 960

Query: 188  KFENE------------------------------------------------------- 247
             F+N+                                                       
Sbjct: 961  GFQNQDHPEYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVTPADTSLFVKANEGKLA 1020

Query: 248  ------------------------------------------VGVFDQYMQNLKKPYLDT 307
                                                      V V  +YMQN KKP+L+ 
Sbjct: 1021 IVLVYVDDLVITGDDEEEILRTKENLSVRFQMKELGQLKHFLVSVMSRYMQNPKKPHLEA 1080

Query: 308  ARPTLRYVK--------------------------GDHDTRRSITGYVFKLGSRTIFWCN 361
             R  LRYVK                          GDHDTRRS TGYVFKLGS TI WC+
Sbjct: 1081 VRRILRYVKSTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFKLGSGTISWCS 1140

BLAST of CmoCh04G012790 vs. NCBI nr
Match: KAE8704364.1 (PLAC8 family protein [Hibiscus syriacus])

HSP 1 Score: 384.0 bits (985), Expect = 1.4e-102
Identity = 226/482 (46.89%), Postives = 272/482 (56.43%), Query Frame = 0

Query: 13   QEVTQPSEPSENEMT-PQ-QLRHSEIILKENLEYAN-AVEDEVNEPEIYEEASQNSAWQK 72
            Q+  +   PSE E + PQ QLR S  I + N +YAN A+ +EV E E +EEASQ+S W  
Sbjct: 625  QQPNEEGGPSETEESIPQSQLRRSTRIRRSNPKYANAAIIEEVTESETFEEASQSSEWMT 684

Query: 73   AMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYG 132
            AM+EE  AL+QNQTW+LV + +D K ISCKW Y+I   PDGSI RYKA+ +  GFSQ+YG
Sbjct: 685  AMKEEIDALQQNQTWDLVPKIKDVKPISCKWVYKIKRHPDGSIERYKARLVAYGFSQQYG 744

Query: 133  LDYDETIRPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFEN-- 192
            LDYDET  PVAK+  V+V  VL  NKDW LWQMD+ NAFL GEL+RE YM QP  F++  
Sbjct: 745  LDYDETFSPVAKLTTVRVLLVLAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQD 804

Query: 193  ------------------------------------------------------------ 252
                                                                        
Sbjct: 805  HSEYMCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEVRFQMKELGQ 864

Query: 253  ----------------------------------EVGVFDQYMQNLKKPYLDTARPTLRY 312
                                              E G+  +YMQN KKP+L+  R  LRY
Sbjct: 865  LKHFLGLEVDRTHEGIFLCQQKYAKDLLKRFGMLEFGMMSRYMQNPKKPHLEAVRRILRY 924

Query: 313  VK--------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQQTIS 370
            VK                          GDHDTRRS TGYVFKLGSRTI WC+KRQ T+S
Sbjct: 925  VKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFKLGSRTISWCSKRQPTVS 984

BLAST of CmoCh04G012790 vs. NCBI nr
Match: KAE8667231.1 (tir-nbs resistance protein [Hibiscus syriacus])

HSP 1 Score: 380.9 bits (977), Expect = 1.2e-101
Identity = 220/450 (48.89%), Postives = 265/450 (58.89%), Query Frame = 0

Query: 4    DSSDTSVGEQEVTQPSEPSEN--------EMTPQQLRHSEIILKENLEYANA-VEDEVNE 63
            D     +GE +V   +   E+        E    Q   S  I + N +YANA + ++  E
Sbjct: 1029 DKLQQKMGEHDVQLQTSSDESKDPNGDDVEQRVTQNPWSIRIRRPNPKYANATIIEDATE 1088

Query: 64   PEIYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVR 123
            PE +EEAS++S W  AM+EE  AL+QNQTW++V + +D K ISCKW Y+I   PDGSI R
Sbjct: 1089 PETFEEASKSSEWMTAMKEEIDALQQNQTWDIVPKIKDVKPISCKWVYKIKRRPDGSIER 1148

Query: 124  YKAQTIDSGFSQEYGLDYDETIRPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELN 183
            YKA+ +  GFSQ+YGLDYDET  PVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+
Sbjct: 1149 YKARLVARGFSQQYGLDYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELD 1208

Query: 184  REFYMDQPKKF------------------------------------------------- 243
            RE YM QP +                                                  
Sbjct: 1209 REIYMTQPIQSQDHPEYVCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVK 1268

Query: 244  ENEVGVFDQYMQNLKKPYLDTARPTLRYVK--------------------------GDHD 303
            +NEVGV   YMQN KKP+L+  R  LRYV                           GDHD
Sbjct: 1269 DNEVGVMSWYMQNPKKPHLEVVRRILRYVNNTIDYGLLYKKGEDCKLVGYCDADYAGDHD 1328

Query: 304  TRRSITGYVFKLGSRTIFWCNKRQQTISLSTKEAEYRAAAGATQENTCLKLLMEDWHQKI 363
            TRRS TGYVFKLGS TI WC KRQ T+SLST EAEYRAAA A QE+T L  LM + HQ +
Sbjct: 1329 TRRSTTGYVFKLGSGTISWCRKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPV 1388

Query: 364  EYPIPLYCNNQSAIRLAENPVFHARTKHVEVHNHFIREKVLKEEIKMQQIKTDVQVADLF 370
            +Y I LYC+NQS IRLAENPVFHARTKHVEVH HF+REKVL+EEI+M+QIKTD Q+ADLF
Sbjct: 1389 DYAISLYCDNQSTIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLF 1448

BLAST of CmoCh04G012790 vs. NCBI nr
Match: KAE8655616.1 (hypothetical protein F3Y22_tig00117021pilonHSYRG00028 [Hibiscus syriacus])

HSP 1 Score: 369.8 bits (948), Expect = 2.8e-98
Identity = 214/475 (45.05%), Postives = 256/475 (53.89%), Query Frame = 0

Query: 41   NLEYAN-AVEDEVNEPEIYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCK 100
            N +YAN A+ +E  EPE +EEAS++S W  AM+EE  AL+QNQTW++V + +D K ISCK
Sbjct: 781  NPKYANAAIIEEATEPETFEEASKSSEWMTAMKEEIDALQQNQTWDIVPKIKDVKPISCK 840

Query: 101  WAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETIRPVAKIIIVQVPPVLTVNKDWKL 160
            W Y+I   PDGSI RYKA+ +  GFSQ+YGLDYDET  PVAK+  V+V   L  NKDW L
Sbjct: 841  WVYKIKRRPDGSIERYKARLVARGFSQQYGLDYDETFSPVAKLTTVRVLLALAANKDWNL 900

Query: 161  WQMDMNNAFLQGELNREFYMDQPKKFENE------------------------------- 220
            WQMD+ NAFL GEL+RE YM QP  F+++                               
Sbjct: 901  WQMDVKNAFLHGELDREIYMTQPMGFQSQDHPEYVCKLRKALYGLKQAPRAWYGKIAEFL 960

Query: 221  ------------------------------------------------------------ 280
                                                                        
Sbjct: 961  TKSGYSVTPADSSLFVKANEEILQTKENLSVRFQMKELGQLKHFLGLEVDRTHEGIFLCQ 1020

Query: 281  ----------------------------VGVFDQYMQNLKKPYLDTARPTLRYVK----- 340
                                         GV  +YMQN KKP+L+  R  LRYVK     
Sbjct: 1021 QKYAKDLLKRFGMLDASQLQRQWNQISKFGVMSRYMQNPKKPHLEAVRRILRYVKNTIDY 1080

Query: 341  ---------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQQTISLSTKEAE 370
                                 GDHDTRRS TGYVFKLGS TI WC+KRQ T+SLST EAE
Sbjct: 1081 GLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFKLGSGTISWCSKRQPTVSLSTTEAE 1140

BLAST of CmoCh04G012790 vs. NCBI nr
Match: KAE8684576.1 (hypothetical protein F3Y22_tig00111127pilonHSYRG00074 [Hibiscus syriacus])

HSP 1 Score: 369.4 bits (947), Expect = 3.6e-98
Identity = 227/530 (42.83%), Postives = 273/530 (51.51%), Query Frame = 0

Query: 13   QEVTQPSEPSENEMT-PQ-QLRHSEIILKENLEYAN-AVEDEVNEPEIYEEASQNSAWQK 72
            Q+  +   PSE E + PQ QLR S  I + N +YAN A+ +E  EPE +EEAS++S W  
Sbjct: 808  QQPNEEGGPSETEESIPQSQLRRSTRIRRPNPKYANAAIIEEATEPETFEEASKSSEWMT 867

Query: 73   AMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYG 132
            AM+EE  AL+QNQTW++V + +D KLISCKW Y+I   PDGSI RYKA+ +  GFSQ+YG
Sbjct: 868  AMKEEIDALQQNQTWDIVPKIKDVKLISCKWVYKIKRRPDGSIERYKARLVARGFSQQYG 927

Query: 133  LDYDETIRPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENE- 192
            LDYDET  PVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+RE YM QP  F+++ 
Sbjct: 928  LDYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQD 987

Query: 193  ------------------------------------------------------------ 252
                                                                        
Sbjct: 988  HPEYVCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEVRFQMKELGQ 1047

Query: 253  ------------------------------------------------------------ 312
                                                                        
Sbjct: 1048 LKHFLGLEVDRTHEGIFLCQQKYAKDLLKRFGMLECKSTSTPMEPNIKMCAHEGKDLEDA 1107

Query: 313  -----------------------VGVFDQYMQNLKKPYLDTARPTLRYVK---------- 370
                                   VGV  +YMQN KKP+L+  R  LRYVK          
Sbjct: 1108 TMYRQLVGSLIYLTLTRPDISYAVGVMSRYMQNPKKPHLEAVRRILRYVKNTIDYGLLYK 1167

BLAST of CmoCh04G012790 vs. NCBI nr
Match: KAE8676439.1 (hypothetical protein F3Y22_tig00111614pilonHSYRG00169 [Hibiscus syriacus])

HSP 1 Score: 367.1 bits (941), Expect = 1.8e-97
Identity = 225/526 (42.78%), Postives = 272/526 (51.71%), Query Frame = 0

Query: 13   QEVTQPSEPSENEMT-PQ-QLRHSEIILKENLEYAN-AVEDEVNEPEIYEEASQNSAWQK 72
            Q+  +   PSE E + PQ QLR S  I + N +YAN A+ +E  EPE +EEAS++S W  
Sbjct: 764  QQPNEKGGPSETEESIPQSQLRRSTRIRRPNPKYANAAIIEEATEPETFEEASKSSEWMT 823

Query: 73   AMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYG 132
            AM+EE  AL+QNQTW++V + +D K ISCKW Y+I   PDGSI RYKA+ +  GFSQ+YG
Sbjct: 824  AMKEEIDALQQNQTWDIVPKIKDVKPISCKWVYKIKRRPDGSIERYKARLVARGFSQQYG 883

Query: 133  LDYDETIRPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENE- 192
            LDYDET  PVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+RE YM QP  F+++ 
Sbjct: 884  LDYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQD 943

Query: 193  ------------------------------------------------------------ 252
                                                                        
Sbjct: 944  HPEYVCKLRKALYGLKQVPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEGKLAIVLVYV 1003

Query: 253  ------------------------------------------------------------ 312
                                                                        
Sbjct: 1004 DDLIITGDDEAEILQTKENLSVRFQMKELGQLKHFLGLEVDRTHEGIFLCQQKYAKDLLK 1063

Query: 313  -------------------VGVFDQYMQNLKKPYLDTARPTLRYVK-------------- 370
                                GV  +YMQN KKP+L+  +  LRYVK              
Sbjct: 1064 RFGMLECKSTSTPMEPNIKFGVMSRYMQNPKKPHLEAVQRILRYVKNTIDYGLLYKKGED 1123

BLAST of CmoCh04G012790 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 119.0 bits (297), Expect = 8.0e-27
Identity = 110/473 (23.26%), Postives = 157/473 (33.19%), Query Frame = 0

Query: 51  EVNEPEIYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDG 110
           +  EP  Y EA +   W  AM++E  A+E   TWE+ + P + K I CKW Y+I    DG
Sbjct: 82  KAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141

Query: 111 SIVRYKAQTIDSGFSQEYGLDYDETIRPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQ 170
           +I RYKA+ +  G++Q+ G+D+ ET  PV K+  V++   ++   ++ L Q+D++NAFL 
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201

Query: 171 GELNREFYMDQPKKF--------------------------------------------- 230
           G+L+ E YM  P  +                                             
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261

Query: 231 -----------------------------ENEVGVFDQYMQNLK---------------- 290
                                         N     D+    LK                
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321

Query: 291 ------------------------------KP---------------------------- 319
                                         KP                            
Sbjct: 322 LEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRL 381

BLAST of CmoCh04G012790 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 1.5e-04
Identity = 25/51 (49.02%), Postives = 28/51 (54.90%), Query Frame = 0

Query: 216 GDHDTRRSITGYVFKLGSRTIFWCNKRQQTISLSTKEAEYRAAAGATQENT 267
           G   TRRS TG+   LG   I W  KRQ T+S S+ E EYRA A    E T
Sbjct: 174 GCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELT 224

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P109783.7e-2923.16Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041468.6e-2622.83Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT941.1e-2521.85Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW22.5e-2521.29Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P0CV724.4e-0648.98Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... [more]
Match NameE-valueIdentityDescription
A0A6A3AIG66.9e-10346.89PLAC8 family protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110458pilonHSY... [more]
A0A6A2WZM75.8e-10248.89Tir-nbs resistance protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112429pi... [more]
A0A2N9HDK62.7e-9946.46Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23021 PE=4 SV=1[more]
A0A2N9ELW12.7e-9946.46Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7729 PE=4 SV=1[more]
A0A2N9GCM14.6e-9946.46Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25011 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAE8704364.11.4e-10246.89PLAC8 family protein [Hibiscus syriacus][more]
KAE8667231.11.2e-10148.89tir-nbs resistance protein [Hibiscus syriacus][more]
KAE8655616.12.8e-9845.05hypothetical protein F3Y22_tig00117021pilonHSYRG00028 [Hibiscus syriacus][more]
KAE8684576.13.6e-9842.83hypothetical protein F3Y22_tig00111127pilonHSYRG00074 [Hibiscus syriacus][more]
KAE8676439.11.8e-9742.78hypothetical protein F3Y22_tig00111614pilonHSYRG00169 [Hibiscus syriacus][more]
Match NameE-valueIdentityDescription
AT4G23160.18.0e-2723.26cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.11.5e-0449.02DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 81..188
e-value: 4.6E-23
score: 82.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 68..188
NoneNo IPR availablePANTHERPTHR11439:SF351CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8coord: 68..188
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 216..345
e-value: 3.18607E-62
score: 193.839
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 81..309

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G012790.1CmoCh04G012790.1mRNA