CmoCh04G012760 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCGTCACTTCTCTTTCTTTTTTACAACTTCCATCGCCTTCCTCTAAACTTCTATTCCATCTTCTTCCATTCATCATTGCATGCTTTGGAATCAAAACCAGAGGAAATACACACATACCCATCAATACCCATCAATACCCATCATGTCTTTTTAACCCAAATACTTGAACCCCTCCTTTCCTTTTGAGTTATTGTTTCATAAATTTCGAATTTGAGCGTTTTCTTTATGTGAATTCTATCGTATTCTTCGATTCTCTTGGTGGGTTCTTGTGGGTGTTTCTTCTTTTGCCTCATCTTTGCTTCTTTTTCCAGTTTCGAATGGGACCCATTAGAGGGTTCAAGAGGAAGAAGCAGAAGAAGGCACAGAAAAAGGTTGTCCAATATGTCTTCGCTGCTGCTTCACTGTCGTTTCAGCCACAGCCCTTGGATTGGTGGGATGAGTTCTCACAGAGGATTACTGGTAAACCATTTTTTGCTTCTCTTCTACTTGAATTTGTGCATTGTTATTGCTCTTAGTTGCTTTCTGTTTATTGGGTCTCTCCGTTGAATTCTTTTGCTGTTTGGTGAGCTTTCTGGACGGTGGTGGAATGTAGTGTTTAATAATCATATATCTTTGATGCCTGCAATTATAGAACCGTGATATGTTCCTAATAACATTGAGAGGGTCAGAAGGGGCAGCCTGTTGAAGTGATCCTATGGGCATGGAGATGGATCAAATCTGTTTAGCAGCAGATATTAGCTTAGATATGTTAGTTCATTTGATAATTGATGTGTACAAGTTGTGGCTACTCACTTAGCTGGTTTATAGAGTGTTAACTGTGTTGTGTTCTGATGTTCTTTCTTTTTCTCATTGAATTGTATCAAAGTACTAATTATTTCTTAGCTGCTCCTACTTTTTTGAGCTTTGGTCATTGTAACAGCCCCAATCCCACCGCTAGTAGATATTGTCCTATTTCGGCTTTCCCTTTCGAGCTTCCCCTCAAAGTTTTTAAAATGCATCTGCTAGGAAGAGGTTTCCACACCCTTATAAACAATGCTTCGTTCTCCTCTCCAACCGATGTGGGGTCTCACAATCCACCCCCTCCTGGGCCCAGTATCCTTGTTAGCACTCGTTCCCTTCTCCCACCCCTCTTTGGGGCCCAGCGTTCTTGCTAGTACTCGGTCCCCTCTCCAATCGATGTGGGATCTCACATTTTGTGTCAGCATTGCTGACAATAAACATCTTTAGAGAACCGAGTCCAATGTGATCCAAAACTCTCGTATTCTTCTTTGTTGATTCGTATTAATGATATCACTCTGACTCTAAATATAGTAAATTGAAGTTAAAATCTGTCATCCGTTGACATTTGTAAGAAGGATGTAACGACCCAGATCCACCGCCAGTAGATATTGTCCTCTTTCGGTTTTCCCTTTCTGGCTTCTCTTCAAGGCTTTAAAATGCGTCTGCTGGGGGAAGGGTGATGTCCAACATTGGTTGGGGAGGAGAACAAAACACCATTTATAAGGGTGTGGAAACTTTCCCCTAGCAAACGCGTTTTAAAACCTTGAGGGGAAGTCCGAAAGGGAAAACCCAAAAAAGACAACATCTGCTAGCAGTGGATCTGGATCCTTAGAAAGACAGTGTCTGAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGAAATGGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCGAAGGATGAGTCTGAAAGTAATGAAGTACATAATACAGAGAAGAAGGGCGGGGATTGAACAGCATTCAACATCAAGTATGTGTTTTTTATGGTCTGCTGTTGTTTATGCCTAGAAATGGAAGGATGACTACAAATATCTTTATCTGGTTGTTTTAGAGGCATCTTGGAAACGGGTATGTTTAAGTTTCGATTCGAGTCAATGTAGTAATGCTACAATTGCATAAAAGTTCATAGAAAATGGATCTCTTCTAGGTGTTAAGATTTGTTTCAACCTACTGATATGGCTAAGTGCTCAATATTTGATTTTGGTATTCCAGAGGACCTAACAACGACTGCCGAAGATTAACGCAGGCTGGGGTCTAGTTTTATTAGATATCAGTTCTTATATTTTGATATTCCATGGTTCTCAAATGTTGGGTACACATTTAGCAGTTACTTTGTTCTGGCCATGATTTATGACATGAAGTAAATCTTTACTTGTAGCTTAAAACCAAAGGATATGACTAAATGTGCGGATGAATGTGTAACTGCTCAAGCTCACCGTAGCAGATGTTGTCTTCTTTGGGCTTTCCCCTCAAGATTTTAAAACGCGTTTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAAGTTTCGTTTCCCTCTCCAATCAATGTGGGGTCTCACAATCTACTTCCCTTGGGGGCCCAACATCCTCGCTGGCACACCATTCGGTGCCTGGCCCTGATACCATTTGTAACCGCACAAGCCCACCACGAGCAGATATTATCCTCTTTGGGTTTTCCCTTCCGAGCTTCCCCTCAAGGTTTTAAAATGCGTCTATTAGAGAGAGGTTTCCACACCCTTATAAACAATATTTCGTTCCCCTCTCTAACTAGTGTGGGATATCACAATCCACCCCATTGGGAGCCCAACATCCTCGTTGGCGCACCTCCCCTGGTGCCTGGCTCTAATACCATTTGTAACAGCCCAACCCCAGTCCTCTTTGGGCTTTTCCTTCCGACCTCCCCCTCAAAGTTTTAAAACGTTTCTGTTAGGGAGAGGTTTCCACACCCTTTTAAAGAATGTTTTGTTCCCCTCTCCAACCAATGTAGGATCTCACACAATGAAATCGTCGAATTCTATCGCCTCACCAATGTAGTTTATCTTTGTTTGGTGATGAATGAGTTGGATATATTGATCTGATATTAGTTAGTCTCACTAATAATGTCACTTGTTATATCTTTACTGTGAGTTCTCTCTCTTTCTATCTGTCATATCTGAAAAGGTACAATGCCTTTTCTTAGGAACAGAACATTTGCAGCAGGGACTGATTATGAGTTTTATCCTTGTTTTTTTGCCTCCAATCAGGACCATTATCTCAGTCCAAGAACACCAAATTTGAGTCAGTTTTCAAAATTTCAAGAAAGACATTCAGCTATATCTGTTCTCTTGTCAAGGAAGCTATGATGGCTAAAACCTCAAATTTTACCGACTTAAACGGCAAGCCTTTGTCCCTAAATGACCAAGTCGCTGTTGCTCTTAGGCGACTTTGCTCCGGTGAATCATTATCAAATATCGGTGACTCGTTTGGAATGAATCAATCATCAGTTTCTCAAATAACATGGCGTTTTGTGGAGGCGATGGAAGAGAAAGGCATTCGCCATCTCTCGTGGCCTTCAACAGAAGAAGATATGGATCAGATAAAGTCCAAGTTCAAGAAAATCAGAGGTCTACCTAATTGTTGCGGTGTAATCGAAACGACGCACATTATGATGACTTTGCCAACGACAGAATCTGCCAATGGCGTCTGGCTTGATCGCGAGAAAAACTGCAGCATGATCTTGCAAGTGATTGTAGATCCAGAAATGAGATTCTGTGACATCATAACAGGTTGGCCAGGAAGCTTAAGCGATGCACTCGTGCTTGAAAGCTCAGGTTTTTTCAAACGTTCACAAGATGGCGAGCGGTTGAACGGAAAGAAGATGAAGCTCTCAGAAAGTGCAGAACTAGGAGAGTATATTATAGGAGACTCTGGTTTTCCACTCTTGCCATGGCTACTAACTCCTTACCAAGGGAAAGGCCTTGCAGATTACCAGACCGAGTTCAATAAGCGCCATTTCGGTACCCGGCTGGTGGCTCGAAGGGCATTGACAAGGTTGAAAGAGATGTGGAAGATCATTAAAGGGATAATGTGGAAGCCTGATAAACATAAGCTACCAAGGATCATTCTTGTTTGCTGCTTACTTCACAATATAATGATCGATGTGGAGGACGAGATGCAAGACGAAATGCCATTGTCTCATCATCACGATCCGAGTTACCGACAACAAAGTTGCAAATTCGTCGACAATACTGCTTCGATCACGAGGGAGAAACTTTCCATGTACTTATCTGAAAAGTTAACACCCTAAGAGAACCTCGTCGTGCACGAAAACATTCTTTTTTTTCTTTTCTTTTTGATAGATTGATCTGTGCTGCTGTTTATTCAAATTGCCCAAAGTGTTGTTCACTCATTTAGATGCTATTGATGGTTCATTATAGATATCTCTGGTGATTATGGTCCTGCTATATCTAAACAGATAGATACCCAGTTTCCTTTTCTACAAACATTATGCTGAACTGTTTAGAACTTTGAGCTGAAGAAATTTCAC TGCGTCACTTCTCTTTCTTTTTTACAACTTCCATCGCCTTCCTCTAAACTTCTATTCCATCTTCTTCCATTCATCATTGCATGCTTTGGAATCAAAACCAGAGGAAATACACACATACCCATCAATACCCATCAATACCCATCATGTCTTTTTAACCCAAATACTTGAACCCCTCCTTTCCTTTTGAGTTATTGTTTCATAAATTTCGAATTTGAGCGTTTTCTTTATGTGAATTCTATCGTATTCTTCGATTCTCTTGGTGGGTTCTTGTGGGTGTTTCTTCTTTTGCCTCATCTTTGCTTCTTTTTCCAGTTTCGAATGGGACCCATTAGAGGGTTCAAGAGGAAGAAGCAGAAGAAGGCACAGAAAAAGGTTGTCCAATATGTCTTCGCTGCTGCTTCACTGTCGTTTCAGCCACAGCCCTTGGATTGGTGGGATGAGTTCTCACAGAGGATTACTGGACCATTATCTCAGTCCAAGAACACCAAATTTGAGTCAGTTTTCAAAATTTCAAGAAAGACATTCAGCTATATCTGTTCTCTTGTCAAGGAAGCTATGATGGCTAAAACCTCAAATTTTACCGACTTAAACGGCAAGCCTTTGTCCCTAAATGACCAAGTCGCTGTTGCTCTTAGGCGACTTTGCTCCGGTGAATCATTATCAAATATCGGTGACTCGTTTGGAATGAATCAATCATCAGTTTCTCAAATAACATGGCGTTTTGTGGAGGCGATGGAAGAGAAAGGCATTCGCCATCTCTCGTGGCCTTCAACAGAAGAAGATATGGATCAGATAAAGTCCAAGTTCAAGAAAATCAGAGGTCTACCTAATTGTTGCGGTGTAATCGAAACGACGCACATTATGATGACTTTGCCAACGACAGAATCTGCCAATGGCGTCTGGCTTGATCGCGAGAAAAACTGCAGCATGATCTTGCAAGTGATTGTAGATCCAGAAATGAGATTCTGTGACATCATAACAGGTTGGCCAGGAAGCTTAAGCGATGCACTCGTGCTTGAAAGCTCAGGTTTTTTCAAACGTTCACAAGATGGCGAGCGGTTGAACGGAAAGAAGATGAAGCTCTCAGAAAGTGCAGAACTAGGAGAGTATATTATAGGAGACTCTGGTTTTCCACTCTTGCCATGGCTACTAACTCCTTACCAAGGGAAAGGCCTTGCAGATTACCAGACCGAGTTCAATAAGCGCCATTTCGGTACCCGGCTGGTGGCTCGAAGGGCATTGACAAGGTTGAAAGAGATGTGGAAGATCATTAAAGGGATAATGTGGAAGCCTGATAAACATAAGCTACCAAGGATCATTCTTGTTTGCTGCTTACTTCACAATATAATGATCGATGTGGAGGACGAGATGCAAGACGAAATGCCATTGTCTCATCATCACGATCCGAGTTACCGACAACAAAGTTGCAAATTCGTCGACAATACTGCTTCGATCACGAGGGAGAAACTTTCCATGTACTTATCTGAAAAGTTAACACCCTAAGAGAACCTCGTCGTGCACGAAAACATTCTTTTTTTTCTTTTCTTTTTGATAGATTGATCTGTGCTGCTGTTTATTCAAATTGCCCAAAGTGTTGTTCACTCATTTAGATGCTATTGATGGTTCATTATAGATATCTCTGGTGATTATGGTCCTGCTATATCTAAACAGATAGATACCCAGTTTCCTTTTCTACAAACATTATGCTGAACTGTTTAGAACTTTGAGCTGAAGAAATTTCAC ATGGGACCCATTAGAGGGTTCAAGAGGAAGAAGCAGAAGAAGGCACAGAAAAAGGTTGTCCAATATGTCTTCGCTGCTGCTTCACTGTCGTTTCAGCCACAGCCCTTGGATTGGTGGGATGAGTTCTCACAGAGGATTACTGGACCATTATCTCAGTCCAAGAACACCAAATTTGAGTCAGTTTTCAAAATTTCAAGAAAGACATTCAGCTATATCTGTTCTCTTGTCAAGGAAGCTATGATGGCTAAAACCTCAAATTTTACCGACTTAAACGGCAAGCCTTTGTCCCTAAATGACCAAGTCGCTGTTGCTCTTAGGCGACTTTGCTCCGGTGAATCATTATCAAATATCGGTGACTCGTTTGGAATGAATCAATCATCAGTTTCTCAAATAACATGGCGTTTTGTGGAGGCGATGGAAGAGAAAGGCATTCGCCATCTCTCGTGGCCTTCAACAGAAGAAGATATGGATCAGATAAAGTCCAAGTTCAAGAAAATCAGAGGTCTACCTAATTGTTGCGGTGTAATCGAAACGACGCACATTATGATGACTTTGCCAACGACAGAATCTGCCAATGGCGTCTGGCTTGATCGCGAGAAAAACTGCAGCATGATCTTGCAAGTGATTGTAGATCCAGAAATGAGATTCTGTGACATCATAACAGGTTGGCCAGGAAGCTTAAGCGATGCACTCGTGCTTGAAAGCTCAGGTTTTTTCAAACGTTCACAAGATGGCGAGCGGTTGAACGGAAAGAAGATGAAGCTCTCAGAAAGTGCAGAACTAGGAGAGTATATTATAGGAGACTCTGGTTTTCCACTCTTGCCATGGCTACTAACTCCTTACCAAGGGAAAGGCCTTGCAGATTACCAGACCGAGTTCAATAAGCGCCATTTCGGTACCCGGCTGGTGGCTCGAAGGGCATTGACAAGGTTGAAAGAGATGTGGAAGATCATTAAAGGGATAATGTGGAAGCCTGATAAACATAAGCTACCAAGGATCATTCTTGTTTGCTGCTTACTTCACAATATAATGATCGATGTGGAGGACGAGATGCAAGACGAAATGCCATTGTCTCATCATCACGATCCGAGTTACCGACAACAAAGTTGCAAATTCGTCGACAATACTGCTTCGATCACGAGGGAGAAACTTTCCATGTACTTATCTGAAAAGTTAACACCCTAA MGPIRGFKRKKQKKAQKKVVQYVFAAASLSFQPQPLDWWDEFSQRITGPLSQSKNTKFESVFKISRKTFSYICSLVKEAMMAKTSNFTDLNGKPLSLNDQVAVALRRLCSGESLSNIGDSFGMNQSSVSQITWRFVEAMEEKGIRHLSWPSTEEDMDQIKSKFKKIRGLPNCCGVIETTHIMMTLPTTESANGVWLDREKNCSMILQVIVDPEMRFCDIITGWPGSLSDALVLESSGFFKRSQDGERLNGKKMKLSESAELGEYIIGDSGFPLLPWLLTPYQGKGLADYQTEFNKRHFGTRLVARRALTRLKEMWKIIKGIMWKPDKHKLPRIILVCCLLHNIMIDVEDEMQDEMPLSHHHDPSYRQQSCKFVDNTASITREKLSMYLSEKLTP Homology
BLAST of CmoCh04G012760 vs. ExPASy Swiss-Prot
Match: Q9M2U3 (Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1) HSP 1 Score: 485.7 bits (1249), Expect = 4.9e-136 Identity = 245/409 (59.90%), Postives = 301/409 (73.59%), Query Frame = 0
BLAST of CmoCh04G012760 vs. ExPASy Swiss-Prot
Match: Q94K49 (Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=ALP1 PE=1 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 8.4e-96 Identity = 174/396 (43.94%), Postives = 260/396 (65.66%), Query Frame = 0
BLAST of CmoCh04G012760 vs. ExPASy Swiss-Prot
Match: Q6AZB8 (Putative nuclease HARBI1 OS=Danio rerio OX=7955 GN=harbi1 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.1e-26 Identity = 77/291 (26.46%), Postives = 144/291 (49.48%), Query Frame = 0
BLAST of CmoCh04G012760 vs. ExPASy Swiss-Prot
Match: B0BN95 (Putative nuclease HARBI1 OS=Rattus norvegicus OX=10116 GN=Harbi1 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.9e-24 Identity = 75/292 (25.68%), Postives = 138/292 (47.26%), Query Frame = 0
BLAST of CmoCh04G012760 vs. ExPASy Swiss-Prot
Match: Q17QR8 (Putative nuclease HARBI1 OS=Bos taurus OX=9913 GN=HARBI1 PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 5.0e-24 Identity = 73/292 (25.00%), Postives = 138/292 (47.26%), Query Frame = 0
BLAST of CmoCh04G012760 vs. ExPASy TrEMBL
Match: A0A6J1GZA0 (protein ALP1-like OS=Cucurbita moschata OX=3662 GN=LOC111458235 PE=3 SV=1) HSP 1 Score: 804.7 bits (2077), Expect = 1.7e-229 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0
BLAST of CmoCh04G012760 vs. ExPASy TrEMBL
Match: A0A6J1K3E1 (protein ALP1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490769 PE=3 SV=1) HSP 1 Score: 796.2 bits (2055), Expect = 6.2e-227 Identity = 389/394 (98.73%), Postives = 392/394 (99.49%), Query Frame = 0
BLAST of CmoCh04G012760 vs. ExPASy TrEMBL
Match: A0A0A0KS64 (DDE Tnp4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G180900 PE=3 SV=1) HSP 1 Score: 741.9 bits (1914), Expect = 1.4e-210 Identity = 360/394 (91.37%), Postives = 379/394 (96.19%), Query Frame = 0
BLAST of CmoCh04G012760 vs. ExPASy TrEMBL
Match: A0A1S3CEZ1 (putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103500196 PE=3 SV=1) HSP 1 Score: 739.6 bits (1908), Expect = 6.9e-210 Identity = 359/394 (91.12%), Postives = 378/394 (95.94%), Query Frame = 0
BLAST of CmoCh04G012760 vs. ExPASy TrEMBL
Match: A0A6J1CCK2 (protein ALP1-like OS=Momordica charantia OX=3673 GN=LOC111009982 PE=3 SV=1) HSP 1 Score: 728.0 bits (1878), Expect = 2.1e-206 Identity = 357/395 (90.38%), Postives = 374/395 (94.68%), Query Frame = 0
BLAST of CmoCh04G012760 vs. NCBI nr
Match: XP_022956519.1 (protein ALP1-like [Cucurbita moschata]) HSP 1 Score: 804.7 bits (2077), Expect = 3.6e-229 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0
BLAST of CmoCh04G012760 vs. NCBI nr
Match: KAG6601011.1 (Protein ALP1-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 797.0 bits (2057), Expect = 7.5e-227 Identity = 390/393 (99.24%), Postives = 392/393 (99.75%), Query Frame = 0
BLAST of CmoCh04G012760 vs. NCBI nr
Match: XP_022995175.1 (protein ALP1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 796.2 bits (2055), Expect = 1.3e-226 Identity = 389/394 (98.73%), Postives = 392/394 (99.49%), Query Frame = 0
BLAST of CmoCh04G012760 vs. NCBI nr
Match: XP_023545365.1 (protein ALP1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 794.3 bits (2050), Expect = 4.9e-226 Identity = 387/394 (98.22%), Postives = 392/394 (99.49%), Query Frame = 0
BLAST of CmoCh04G012760 vs. NCBI nr
Match: KAG7031625.1 (Protein ALP1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 789.6 bits (2038), Expect = 1.2e-224 Identity = 388/393 (98.73%), Postives = 391/393 (99.49%), Query Frame = 0
BLAST of CmoCh04G012760 vs. TAIR 10
Match: AT3G55350.1 (PIF / Ping-Pong family of plant transposases ) HSP 1 Score: 485.7 bits (1249), Expect = 3.5e-137 Identity = 245/409 (59.90%), Postives = 301/409 (73.59%), Query Frame = 0
BLAST of CmoCh04G012760 vs. TAIR 10
Match: AT3G63270.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: PIF / Ping-Pong family of plant transposases (TAIR:AT3G55350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 352.1 bits (902), Expect = 6.0e-97 Identity = 174/396 (43.94%), Postives = 260/396 (65.66%), Query Frame = 0
BLAST of CmoCh04G012760 vs. TAIR 10
Match: AT5G12010.1 (unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 148.7 bits (374), Expect = 1.0e-35 Identity = 93/324 (28.70%), Postives = 164/324 (50.62%), Query Frame = 0
BLAST of CmoCh04G012760 vs. TAIR 10
Match: AT4G29780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12010.1); Has 945 Blast hits to 944 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 519; Fungi - 43; Plants - 365; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). ) HSP 1 Score: 127.1 bits (318), Expect = 3.1e-29 Identity = 96/355 (27.04%), Postives = 167/355 (47.04%), Query Frame = 0
BLAST of CmoCh04G012760 vs. TAIR 10
Match: AT1G72270.1 (CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27010.1); Has 772 Blast hits to 657 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). ) HSP 1 Score: 95.5 bits (236), Expect = 1.0e-19 Identity = 80/313 (25.56%), Postives = 135/313 (43.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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