CmoCh04G012130 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G012130
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Description17.8 kDa class I heat shock protein-like
LocationCmo_Chr04: 6169180 .. 6171619 (-)
RNA-Seq ExpressionCmoCh04G012130
SyntenyCmoCh04G012130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTGATTCCAAGCATTTTTGGTGGGCGCCGGAGCAACGTCTTCGATCCCTTCTCCTTAGACGTTTGGGATCCTTTCGAAGGCTTACCATTTTCAAGCTCTCTGGCCAACGTCCCCTCCTCCTCTGCTTTTGCCAACACCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACGTGTTGAAGGCGGATCTTCCGGGGATCAAAAAGGAGGAAGTGAAGGTTGAAATTGAAGAAGGGGGAGTTCTGCANNNTGAAGAAGGGGGAGTTCTGCAGATCAGCGGAGAGAGAAGCAAAGAGCAGGAGGAGAAGAACGACAAGTGGCATAGAATTGAAAGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCGAAAGTAGAAGAGGTGAAGGCCAACATGGAGAATGGGGTGCTGACGGTGACGGTGCCCAAAATGGAAGTGAAGAAGCCAGAAGTCAGGAGCATTGACATCTCTGGTTAAACACGGTTGGTTCTTCTGCTCCTTCCTGATCGGGCAGAAGTAAGTTGTTGAAATGGGTGGGTTTCTGATTTTGATGTTTTCCACAATGTTTTTGAATGTGAAAAAGATGAAGAAAATGGTTTGTAATTTCCGGTCTATTTGTGGGCTATTTCGGTTTTGTTTATGATGTATGAAAAAGAATGTGTAAGAGAAAATATATGAAAAAGAATGTGTAAAAGAAAATACATGGTAATTAAATAATTCTGTTTGGTACTAGACAAAAATCTTGGATCCGAGTTTCATAGTATCTTTGATAACTTGATGTGATTTTTCATTCACCTAGGATTTGAGTTTAGTGGGATTAATTCTTGGATCCGAGTGATTTTTCATTCACCTAGGATTTGAGTTTAGTGGGATTAATTCTTGGATCCGAGTGATTTTTCATTCACCTAGGATTTGAGTTTAGTGGGATTAATTCTTGGATCCGAGTTTCATAGTATCTAATCACATCAAGTTATCAGAGTTTAGTGGGATTAATTATATTGTTTTTTAGGATTTGTGTAATTATATTAAGTGCATTAAATTTCATATTCCAAAATAAAATAATTCTAAAAAGATGGTTGGAGTGAAGCAAATTTTACAATTAAAAAAACTTAATACCTCCTTTATGAGGTCCTATCGGGATAGGTAGGCCCAAAAGATGCTCCAAATCAAGAACTTGGTTCATAGGGCTTACTCTTGAATTTCAAACTGTGCTCCAAATCAAGAACTTGGTTCATAGGGCTTACTCTTGAATTCTTCAACCATATGATCACTAAAAAAATTTATCTGATCACTTCAGGCTTTAATGGAATATTAGCATCTGAACTCTCTTAGAATCACTGTTGTTATGTCGTGAATCCGACTCAAGCCGAATCTGGTTAAATGTCTAAACCACTTAACAATGCAGATCACACACACCCAAACAAACCTTTTTCATGTTTGATTACAAAGTGAATGCACATTGCAGAACACAATTCTTTGCTTTCTTATGTATACCATTACAGTTCATTTGGCACATTACGAAAGCCTGTACAGCATTTGGCACATTACGAAAGCCTGTACAGCATCCTATTTAAAGTCTTGGATGTGTACGATCACTTAACAAGAAATAAACTATTTTATTAGAGATGAAGAGAATTGGATATTCATATCTTATACATCAACGACTCAATGTGAAATTCTGTGTTTAGTACACGACCAGACCAACCAGACTCCTTTTCCAGACTCCTTTTCGACTTTCCAATGTAACACATTACTAAATTACATGTTTTATTTAACCAAAACACAACATCAGCCAGAGATGTCAATGGTCTTGATTTCCGGCTTCTTCACTTCCATCTTAGGCACTGTCACCGTCAGCACTCCATTCTCCATGCTCGCCTTCACCTCTCCTGCTTTTGCGTTCTCCGGCAGCCTGAACCTCCTCAGGAACTTCCCACTGCTTCGTTCAATTCTATGCCATTTGTCGTTTTTCTCCTCCTGTTCTTTGCTCCTCTCTCCACTGATCTGCAGCACTCCCCCCTCTTCAACTTCAACTTTCACCTCCTCCTTCTTGATCCCGGGAAGATCCGCCTTGAAGATGTGGGCTTCCGGGGTCTCCTTCCAGTCGATGCGGGTGTTGGCAAAAGCAGAGGTCTCACTAGCAGAGGAGGGGACGTTGGCCAGTGAGCTTGAAAATGGGAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATTGCTGTACTTGAGAATGATAGAATTGGAACTTTGTTTGCTGTGTTTGTCGATGCCCATCCACCGCTGGGACCAAGGCATTTAAATAGGAAGCAACAGAGCATGCGAGTGGTGTCGTGGCTTTTCTAG

mRNA sequence

ATGGCGTTGATTCCAAGCATTTTTGGTGGGCGCCGGAGCAACGTCTTCGATCCCTTCTCCTTAGACGTTTGGGATCCTTTCGAAGGCTTACCATTTTCAAGCTCTCTGGCCAACGTCCCCTCCTCCTCTGCTTTTGCCAACACCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACGTGTTGAAGGCGGATCTTCCGGGGATCAAAAAGGAGGAAGTGAAGGTTGAAATTGAAGAAGGGGGAGTTCTGCANNNTGAAGAAGGGGGAGTTCTGCAGATCAGCGGAGAGAGAAGCAAAGAGCAGGAGGAGAAGAACGACAAGTGGCATAGAATTGAAAGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCGAAAGTAGAAGAGGTGAAGGCCAACATGGAGAATGGGGTGCTGACGGTGACGGTGCCCAAAATGGAAGTGAAGAAGCCAGAAGTCAGGAGCATTGACATCTCTGTACACGACCAGACCAACCAGACTCCTTTTCCAGACTCCTTTTCGACTTTCCAATGTAACACATTACTAAATTACATGTTTTATTTAACCAAAACACAACATCAGCCAGAGATGTCAATGGTCTTGATTTCCGGCTTCTTCACTTCCATCTTAGGCACTGTCACCGTCAGCACTCCATTCTCCATGCTCGCCTTCACCTCTCCTGCTTTTGCGTTCTCCGGCAGCCTGAACCTCCTCAGGAACTTCCCACTGCTTCGTTCAATTCTATGCCATTTGTCGTTTTTCTCCTCCTGTTCTTTGCTCCTCTCTCCACTGATCTGCAGCACTCCCCCCTCTTCAACTTCAACTTTCACCTCCTCCTTCTTGATCCCGGGAAGATCCGCCTTGAAGATGTGGGCTTCCGGGGTCTCCTTCCAGTCGATGCGGGTGTTGGCAAAAGCAGAGGTCTCACTAGCAGAGGAGGGGACGTTGGCCAGTGAGCTTGAAAATGGGAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATTGCTGTACTTGAGAATGATAGAATTGGAACTTTGTTTGCTGTGTTTGTCGATGCCCATCCACCGCTGGGACCAAGGCATTTAAATAGGAAGCAACAGAGCATGCGAGTGGTGTCGTGGCTTTTCTAG

Coding sequence (CDS)

ATGGCGTTGATTCCAAGCATTTTTGGTGGGCGCCGGAGCAACGTCTTCGATCCCTTCTCCTTAGACGTTTGGGATCCTTTCGAAGGCTTACCATTTTCAAGCTCTCTGGCCAACGTCCCCTCCTCCTCTGCTTTTGCCAACACCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACGTGTTGAAGGCGGATCTTCCGGGGATCAAAAAGGAGGAAGTGAAGGTTGAAATTGAAGAAGGGGGAGTTCTGCANNNTGAAGAAGGGGGAGTTCTGCAGATCAGCGGAGAGAGAAGCAAAGAGCAGGAGGAGAAGAACGACAAGTGGCATAGAATTGAAAGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCGAAAGTAGAAGAGGTGAAGGCCAACATGGAGAATGGGGTGCTGACGGTGACGGTGCCCAAAATGGAAGTGAAGAAGCCAGAAGTCAGGAGCATTGACATCTCTGTACACGACCAGACCAACCAGACTCCTTTTCCAGACTCCTTTTCGACTTTCCAATGTAACACATTACTAAATTACATGTTTTATTTAACCAAAACACAACATCAGCCAGAGATGTCAATGGTCTTGATTTCCGGCTTCTTCACTTCCATCTTAGGCACTGTCACCGTCAGCACTCCATTCTCCATGCTCGCCTTCACCTCTCCTGCTTTTGCGTTCTCCGGCAGCCTGAACCTCCTCAGGAACTTCCCACTGCTTCGTTCAATTCTATGCCATTTGTCGTTTTTCTCCTCCTGTTCTTTGCTCCTCTCTCCACTGATCTGCAGCACTCCCCCCTCTTCAACTTCAACTTTCACCTCCTCCTTCTTGATCCCGGGAAGATCCGCCTTGAAGATGTGGGCTTCCGGGGTCTCCTTCCAGTCGATGCGGGTGTTGGCAAAAGCAGAGGTCTCACTAGCAGAGGAGGGGACGTTGGCCAGTGAGCTTGAAAATGGGAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATTGCTGTACTTGAGAATGATAGAATTGGAACTTTGTTTGCTGTGTTTGTCGATGCCCATCCACCGCTGGGACCAAGGCATTTAAATAGGAAGCAACAGAGCATGCGAGTGGTGTCGTGGCTTTTCTAG

Protein sequence

MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSSSAFANTRIDWKETPEAHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDISVHDQTNQTPFPDSFSTFQCNTLLNYMFYLTKTQHQPEMSMVLISGFFTSILGTVTVSTPFSMLAFTSPAFAFSGSLNLLRNFPLLRSILCHLSFFSSCSLLLSPLICSTPPSSTSTFTSSFLIPGRSALKMWASGVSFQSMRVLAKAEVSLAEEGTLASELENGKPSKGSQTSKEKGSKTLLRRPPKMLGINAIVVVGELDSRIAVLENDRIGTLFAVFVDAHPPLGPRHLNRKQQSMRVVSWLF
Homology
BLAST of CmoCh04G012130 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 9.1e-61
Identity = 119/164 (72.56%), Postives = 139/164 (84.76%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANV--PSSSAFANTRIDWKETPEA 60
           M++IPS FGGRRSNVFDPFSLDVWDPF+  P  +S A+     ++AF NT IDWKETP+A
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQA 60

Query: 61  HVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKF 120
           HV KADLPG+KKEEVKVE+        EEG VLQISGER+KE+EEKNDKWHR+ERSSGKF
Sbjct: 61  HVFKADLPGLKKEEVKVEL--------EEGKVLQISGERNKEKEEKNDKWHRVERSSGKF 120

Query: 121 MRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           +RRFRLPENAKV+EVKA M NGV+TVTVPK+E+KKPEV++IDIS
Sbjct: 121 LRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDIS 156

BLAST of CmoCh04G012130 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 234.6 bits (597), Expect = 2.0e-60
Identity = 118/164 (71.95%), Postives = 138/164 (84.15%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSS--SAFANTRIDWKETPEA 60
           M+LIPSIFGGRR+NVFDPFSLDV+DPFEG    S LAN P+   +AF N ++DW+ETPEA
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKF 120
           HV KADLPG++KEEVKVE+        E+G +LQISGERS E EEKNDKWHR+ERSSGKF
Sbjct: 61  HVFKADLPGLRKEEVKVEV--------EDGNILQISGERSNENEEKNDKWHRVERSSGKF 120

Query: 121 MRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
            RRFRLPENAK+EE+KA+MENGVL+VTVPK+  KKPEV+SIDIS
Sbjct: 121 TRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDIS 156

BLAST of CmoCh04G012130 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.0e-60
Identity = 122/165 (73.94%), Postives = 141/165 (85.45%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSL--ANVP-SSSAFANTRIDWKETPE 60
           M+LIPS FGGRRSNVFDPFSLDVWDPF+  PF++S   A+ P  +SAF +TR+DWKETPE
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPE 60

Query: 61  AHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGK 120
           AHV KADLPG+KKEEVKVEI        E+  VLQISGERS E+E+KND+WHR+ERSSGK
Sbjct: 61  AHVFKADLPGMKKEEVKVEI--------EDDRVLQISGERSVEKEDKNDQWHRLERSSGK 120

Query: 121 FMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           FMRRFRLPENAK+++VKA MENGVLTVTVPK EVKKPEV++IDIS
Sbjct: 121 FMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDIS 157

BLAST of CmoCh04G012130 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 7.7e-60
Identity = 122/166 (73.49%), Postives = 137/166 (82.53%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEG-LPFSSSLANVPSS---SAFANTRIDWKETP 60
           M+LIPSIFGGRRSNVFDPFS D+WDPFEG    SS+LAN  ++   +AF N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSG 120
           EAHV KADLPG+KKEEVKVE+        E+  VLQISGERSKE EEKNDKWHR+ER+SG
Sbjct: 61  EAHVFKADLPGLKKEEVKVEV--------EDKNVLQISGERSKENEEKNDKWHRVERASG 120

Query: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           KFMRRFRLPENAK+EEVKA MENGVLTV VPK   KKP+V+SIDIS
Sbjct: 121 KFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDIS 158

BLAST of CmoCh04G012130 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.8e-59
Identity = 115/162 (70.99%), Postives = 139/162 (85.80%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSSSAFANTRIDWKETPEAHV 60
           M+LIPS FGGRRS+VFDPFSLDVWDPF+  PF SSL+    +SAF +TR+DWKETPEAHV
Sbjct: 1   MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLS--AENSAFVSTRVDWKETPEAHV 60

Query: 61  LKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFMR 120
            KAD+PG+KKEEVK+EI        ++G VLQISGER+ E+E+KND WHR+ERSSGK +R
Sbjct: 61  FKADIPGLKKEEVKLEI--------QDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVR 120

Query: 121 RFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           RFRLPENAKV++VKA+MENGVLTVTVPK E+KKP+V++IDIS
Sbjct: 121 RFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDIS 152

BLAST of CmoCh04G012130 vs. ExPASy TrEMBL
Match: A0A6J1GY40 (uncharacterized protein LOC111458525 OS=Cucurbita moschata OX=3662 GN=LOC111458525 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 9.7e-82
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSSSAFANTRIDWKETPEAHV 60
           MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSSSAFANTRIDWKETPEAHV
Sbjct: 184 MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSSSAFANTRIDWKETPEAHV 243

Query: 61  LKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFMR 120
           LKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFMR
Sbjct: 244 LKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFMR 303

Query: 121 RFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           RFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS
Sbjct: 304 RFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 345

BLAST of CmoCh04G012130 vs. ExPASy TrEMBL
Match: A0A6J1ILW3 (17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111478197 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.2e-71
Identity = 146/166 (87.95%), Postives = 151/166 (90.96%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSS----SAFANTRIDWKETP 60
           M+LIPSIFGGRRSNVFDPFSLDVWDPFEG PFSSSLAN PSS    SAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANAPSSARETSAFANTRIDWKETP 60

Query: 61  EAHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSG 120
           EAHV KADLPGIKKEEVKVEI        EEGGVLQISGERSKEQEEKN+KWHRIERSSG
Sbjct: 61  EAHVFKADLPGIKKEEVKVEI--------EEGGVLQISGERSKEQEEKNEKWHRIERSSG 120

Query: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPE+++IDIS
Sbjct: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEIKAIDIS 158

BLAST of CmoCh04G012130 vs. ExPASy TrEMBL
Match: A0A6J1GZE6 (17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111458528 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.2e-71
Identity = 147/166 (88.55%), Postives = 151/166 (90.96%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSS----SAFANTRIDWKETP 60
           M+LIPSIFGGRRSNVFDPFSLDVWDPFEG PFSSSLAN  SS    SAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANAASSARETSAFANTRIDWKETP 60

Query: 61  EAHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSG 120
           EAHVLKADLPGIKKEEVKVEI        EEGGVLQISGERSKEQEEKNDKWHRIERSSG
Sbjct: 61  EAHVLKADLPGIKKEEVKVEI--------EEGGVLQISGERSKEQEEKNDKWHRIERSSG 120

Query: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPE+++IDIS
Sbjct: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEIKAIDIS 158

BLAST of CmoCh04G012130 vs. ExPASy TrEMBL
Match: A0A6J1IKB6 (17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111478205 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 3.5e-71
Identity = 145/166 (87.35%), Postives = 151/166 (90.96%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSS----SAFANTRIDWKETP 60
           M+LIPSIFGGRRSNVFDPFSLDVWDPFEG PFSSSLAN PSS    SAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANAPSSARETSAFANTRIDWKETP 60

Query: 61  EAHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSG 120
           EAH+ KADLPGIKKEEVKVEI        EEGGVLQISGERSKEQEEKN+KWHR+ERSSG
Sbjct: 61  EAHMFKADLPGIKKEEVKVEI--------EEGGVLQISGERSKEQEEKNEKWHRVERSSG 120

Query: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEV+SI+IS
Sbjct: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVKSIEIS 158

BLAST of CmoCh04G012130 vs. ExPASy TrEMBL
Match: A0A6J1H0S8 (17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111458527 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-70
Identity = 143/166 (86.14%), Postives = 150/166 (90.36%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSS----SAFANTRIDWKETP 60
           MALIPSIFGGRRSNVFDPFSLDVWDPFEG PFSSSLANVPSS    SAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSASETSAFANTRIDWKETP 60

Query: 61  EAHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSG 120
           EAH+ KADLPGIKKEEVKVE+        EEGGVLQISGERSKEQEEKNDKWHRIERSSG
Sbjct: 61  EAHIFKADLPGIKKEEVKVEV--------EEGGVLQISGERSKEQEEKNDKWHRIERSSG 120

Query: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           KF+RRFRLPENAK  EVKA+MENGVLTVTVPKMEVKKPE+++IDIS
Sbjct: 121 KFLRRFRLPENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDIS 158

BLAST of CmoCh04G012130 vs. NCBI nr
Match: KAG6600961.1 (18.5 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362.5 bits (929), Expect = 4.9e-96
Identity = 220/360 (61.11%), Postives = 228/360 (63.33%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSS----SAFANTRIDWKETP 60
           M+LIPSIFGGRRSNVFDPFSLDVWDPFEG PFSSSLANVPSS    SAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  EAHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSG 120
           EAHV KADLPGIKKEEVKVEI        EEGGVLQISGERSKEQEEKNDKWHRIERSSG
Sbjct: 61  EAHVFKADLPGIKKEEVKVEI--------EEGGVLQISGERSKEQEEKNDKWHRIERSSG 120

Query: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDISVHDQTNQTPFPDSF 180
           KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPE++SI+ISV ++T         
Sbjct: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEMKSIEISVEEETK-------- 180

Query: 181 STFQCNTLLNYMFYLTKTQHQPEMSMVLISGFFTSILGTVTVSTPFSMLAFTSPAFAFSG 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 SLNLLRNFPLLRSILCHLSFFSSCSLLLSPLICSTPPSSTSTFTSSFLIPGRSALKMWAS 300
                      R   C                            SSFLIPGRSALKMWAS
Sbjct: 241 -----------RGRRC----------------------------SSFLIPGRSALKMWAS 245

Query: 301 GVSFQSMRVLAKAEVSLAEEGTLASELENGKPSKGSQTSKEKGSKTLLRRPPKMLGINAI 357
           GVSFQSMRVLAKAEVS AEEG LA E+ENGKPSKGSQTS EKGSK LLRRPPKMLGI A+
Sbjct: 301 GVSFQSMRVLAKAEVSRAEEGALADEVENGKPSKGSQTSNEKGSKMLLRRPPKMLGIRAM 245

BLAST of CmoCh04G012130 vs. NCBI nr
Match: XP_022957031.1 (uncharacterized protein LOC111458525 [Cucurbita moschata])

HSP 1 Score: 313.9 bits (803), Expect = 2.0e-81
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSSSAFANTRIDWKETPEAHV 60
           MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSSSAFANTRIDWKETPEAHV
Sbjct: 184 MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSSSAFANTRIDWKETPEAHV 243

Query: 61  LKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFMR 120
           LKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFMR
Sbjct: 244 LKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFMR 303

Query: 121 RFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           RFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS
Sbjct: 304 RFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 345

BLAST of CmoCh04G012130 vs. NCBI nr
Match: XP_023529977.1 (17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.2 bits (731), Expect = 4.5e-73
Identity = 151/166 (90.96%), Postives = 152/166 (91.57%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSS----SAFANTRIDWKETP 60
           MALIPSIFGGRRSNVFDPFSLDVWDPFEG PFSSSLANVPSS    SAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  EAHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSG 120
           EAHV KADLPGIKKEEVKVEI        EEGGVLQISGERSKEQEEKNDKWHRIERSSG
Sbjct: 61  EAHVFKADLPGIKKEEVKVEI--------EEGGVLQISGERSKEQEEKNDKWHRIERSSG 120

Query: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEV+SIDIS
Sbjct: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVKSIDIS 158

BLAST of CmoCh04G012130 vs. NCBI nr
Match: KAG6600959.1 (18.2 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.9 bits (725), Expect = 2.2e-72
Identity = 148/165 (89.70%), Postives = 152/165 (92.12%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPS---SSAFANTRIDWKETPE 60
           MALIPSIFGGRRSNVFDPFSLDVWDPFEG PFSSSLANVPS   +SAFANTRIDWKETPE
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSARETSAFANTRIDWKETPE 60

Query: 61  AHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGK 120
           AHV KADLPGIKKEEVKVEI        EEGGVLQISGERSKEQEEKNDKWHRIERSSGK
Sbjct: 61  AHVFKADLPGIKKEEVKVEI--------EEGGVLQISGERSKEQEEKNDKWHRIERSSGK 120

Query: 121 FMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           FMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPE+++IDIS
Sbjct: 121 FMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEIKAIDIS 157

BLAST of CmoCh04G012130 vs. NCBI nr
Match: KAG6600957.1 (18.2 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.5 bits (724), Expect = 2.9e-72
Identity = 150/166 (90.36%), Postives = 151/166 (90.96%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSS----SAFANTRIDWKETP 60
           MALIPSIFGGRRSNVFDPFSLDVWDPFEG PFSSSLANVPSS    SAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  EAHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSG 120
           EAHV KADLPGIKKEEVKVEI        EEGGVLQISGERSKEQEEKNDKWHRIERSSG
Sbjct: 61  EAHVFKADLPGIKKEEVKVEI--------EEGGVLQISGERSKEQEEKNDKWHRIERSSG 120

Query: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           KFMRRFRLPENAKV EVKANMENGVLTVTVPKMEVKKPEV+SIDIS
Sbjct: 121 KFMRRFRLPENAKVGEVKANMENGVLTVTVPKMEVKKPEVKSIDIS 158

BLAST of CmoCh04G012130 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 234.6 bits (597), Expect = 1.4e-61
Identity = 118/164 (71.95%), Postives = 138/164 (84.15%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSS--SAFANTRIDWKETPEA 60
           M+LIPSIFGGRR+NVFDPFSLDV+DPFEG    S LAN P+   +AF N ++DW+ETPEA
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKF 120
           HV KADLPG++KEEVKVE+        E+G +LQISGERS E EEKNDKWHR+ERSSGKF
Sbjct: 61  HVFKADLPGLRKEEVKVEV--------EDGNILQISGERSNENEEKNDKWHRVERSSGKF 120

Query: 121 MRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
            RRFRLPENAK+EE+KA+MENGVL+VTVPK+  KKPEV+SIDIS
Sbjct: 121 TRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDIS 156

BLAST of CmoCh04G012130 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 232.6 bits (592), Expect = 5.5e-61
Identity = 122/166 (73.49%), Postives = 137/166 (82.53%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEG-LPFSSSLANVPSS---SAFANTRIDWKETP 60
           M+LIPSIFGGRRSNVFDPFS D+WDPFEG    SS+LAN  ++   +AF N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSG 120
           EAHV KADLPG+KKEEVKVE+        E+  VLQISGERSKE EEKNDKWHR+ER+SG
Sbjct: 61  EAHVFKADLPGLKKEEVKVEV--------EDKNVLQISGERSKENEEKNDKWHRVERASG 120

Query: 121 KFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           KFMRRFRLPENAK+EEVKA MENGVLTV VPK   KKP+V+SIDIS
Sbjct: 121 KFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDIS 158

BLAST of CmoCh04G012130 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 229.9 bits (585), Expect = 3.5e-60
Identity = 114/164 (69.51%), Postives = 136/164 (82.93%), Query Frame = 0

Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSS--SAFANTRIDWKETPEA 60
           M+L+PS FGGRR+NVFDPFSLDVWDPFEG   +  L N P+   +AF N ++DW+ETPEA
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAPAKDVAAFTNAKVDWRETPEA 60

Query: 61  HVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKF 120
           HV KAD+PG+KKEEVKVE+        E+G +LQISGERS E EEK+D WHR+ERSSGKF
Sbjct: 61  HVFKADVPGLKKEEVKVEV--------EDGNILQISGERSSENEEKSDTWHRVERSSGKF 120

Query: 121 MRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           MRRFRLPENAKVEEVKA+MENGVL+VTVPK++  KPEV+S+DIS
Sbjct: 121 MRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDIS 155

BLAST of CmoCh04G012130 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 203.4 bits (516), Expect = 3.5e-52
Identity = 109/163 (66.87%), Postives = 128/163 (78.53%), Query Frame = 0

Query: 1   MALIPSIF-GGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSSSAFANTRIDWKETPEAH 60
           M++IPS F   RRSN+FDPFSLDVWDPF+ L  SSSL+    +SA  N R+DW+ETPEAH
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELT-SSSLSR--ENSAIVNARVDWRETPEAH 60

Query: 61  VLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFM 120
           V KADLPG+KKEEVKVEI        EE  VL+ISGER  E+E+KND WHR+ERSSG+F 
Sbjct: 61  VFKADLPGLKKEEVKVEI--------EEDSVLKISGERHVEKEDKNDTWHRVERSSGQFT 120

Query: 121 RRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDIS 163
           RRFRLPEN K+++VKA MENGVLTVTVPK E KK +V+SI IS
Sbjct: 121 RRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQIS 152

BLAST of CmoCh04G012130 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 200.7 bits (509), Expect = 2.3e-51
Identity = 110/167 (65.87%), Postives = 128/167 (76.65%), Query Frame = 0

Query: 1   MALIPSIFGGRR---SNVFDPFSLDVWDPFEGLPFSSSLANVPSSSAFANTRIDWKETPE 60
           M+LIPS FG  R   +N+FDPFSLDVWDPF+ L F SS     SSSA AN R+DWKET E
Sbjct: 1   MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKELQFPSS-----SSSAIANARVDWKETAE 60

Query: 61  AHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGK 120
           AHV KADLPG+KKEEVKVEI        E+  VL+ISGER  E+EEK D WHR+ERSSG 
Sbjct: 61  AHVFKADLPGMKKEEVKVEI--------EDDSVLKISGERHVEKEEKQDTWHRVERSSGG 120

Query: 121 FMRRFRLPENAKVEEVKANMENGVLTVTVPKMEV--KKPEVRSIDIS 163
           F R+FRLPEN K+++VKA+MENGVLTVTVPK+E   KK +V+SIDIS
Sbjct: 121 FSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSIDIS 154

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P273969.1e-6172.5617.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1[more]
P138532.0e-6071.9517.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6... [more]
P278802.0e-6073.9418.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S... [more]
P190377.7e-6073.4918.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P... [more]
P025193.8e-5970.9917.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=... [more]
Match NameE-valueIdentityDescription
A0A6J1GY409.7e-82100.00uncharacterized protein LOC111458525 OS=Cucurbita moschata OX=3662 GN=LOC1114585... [more]
A0A6J1ILW31.2e-7187.9517.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
A0A6J1GZE61.2e-7188.5517.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1IKB63.5e-7187.3517.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
A0A6J1H0S81.7e-7086.1417.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
Match NameE-valueIdentityDescription
KAG6600961.14.9e-9661.1118.5 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_022957031.12.0e-81100.00uncharacterized protein LOC111458525 [Cucurbita moschata][more]
XP_023529977.14.5e-7390.9617.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo][more]
KAG6600959.12.2e-7289.7018.2 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. soro... [more]
KAG6600957.12.9e-7290.3618.2 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. soro... [more]
Match NameE-valueIdentityDescription
AT1G53540.11.4e-6171.95HSP20-like chaperones superfamily protein [more]
AT5G59720.15.5e-6173.49heat shock protein 18.2 [more]
AT3G46230.13.5e-6069.51heat shock protein 17.4 [more]
AT2G29500.13.5e-5266.87HSP20-like chaperones superfamily protein [more]
AT1G59860.12.3e-5165.87HSP20-like chaperones superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 10..160
e-value: 3.2E-47
score: 162.0
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 25..159
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 51..160
e-value: 4.1E-28
score: 97.5
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 41..162
score: 31.02586
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..341
NoneNo IPR availablePANTHERPTHR11527:SF32517.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKEcoord: 1..160
NoneNo IPR availableCDDcd06472ACD_ScHsp26_likecoord: 49..146
e-value: 9.84375E-42
score: 140.518
IPR031107Small heat shock protein HSP20PANTHERPTHR11527HEAT-SHOCK PROTEIN 20 FAMILY MEMBERcoord: 1..160

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G012130.1CmoCh04G012130.1mRNA