CmoCh04G011920 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G011920
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	60S acidic ribosomal protein P0
Location	Cmo_Chr04: 6099484 .. 6101825 (+)
RNA-Seq Expression	CmoCh04G011920
Synteny	CmoCh04G011920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAAGTATATAAAGCGAACCAGCGCCCACTTTCATCTTCCATCAGCCTGCTAAGCTCCCCAGGAGTTGTCCAAAACCCTAGAAAAACTTCTTAGCACAACAGAGGTTAAAGAGACGGCATAGCTTCGCTGTCCGCCTTGACAGAGCCACTAGCTTCTTCTTGGCCCTCGGTTTTGCTTCTCTTCTTTCTTTTATAGACATTTTTGTTGTATCTTCGATTTTCATCACAAACACATTTCAATGGCTGTGAAACCCACCAAGGCTGAAAAGAAGGTCGCTTACGACTCCAAGCTTTGCCAGCTCCTCGATGAGTACAGTCAGGTCTTGATTGTGGCCGCTGACAATGTTGGATCTAACCAGCTCCAGAACATTAGGAAGGGTCTTCGTGGTGACTCTGTTGTGCTCATGGGTAAAAATACCATGATGAAGCGGTCTGTGAGGATTCACGCTGAGAACACTGGAAACAAGGCTTACCTCAATCTTCTTCCTCTTCTTGTGGTAAGTGTTGCAATGGGTATTATATTGTGGTTTGAGTTTCCAATACTTTGTTGTTATCGTTTTTCTCGAGGCCCTGCTTGCTAATTATCTTCGCAAATGAAGCTTTTGACACAGTACCTTCGTTTGTTGTAATAGGGAAACGTTGGTTTGATCTTCACCAAGGGTGATTTGAAGGAAGTCAGTGAGGAGGTTGCCAAATACAAGGTCTGTAGTTTACTAGAACAAACAAATTAGTTCTGAGATTTTGAGTATTATTTTTTTAGTGTTGTATGAAAATCTAACATAATGAATGTTTCCTCTCACGAGTTTATCGATTATCGTTTTGTTATGAATGTCGTTCACACTTTCATGTTCTTTCTGTCAAATGATACATATTTTAAGCGTAAAATACATCGAACTTGATCTTTTATCTTTATAAATCCTTGTCTTATTTATTTTTAATGTCTATCTGGTTTAAAAACGGTATATATTGTTAAAAAAATTTATATTTGACATATGTGTTCTTGTCACCCTGTTCGTGTGCGTTCATGTCTATTCATGCTTCTTTGGTTTGTAAACAATGATATTTCGGAATTATGAACTTGGGAGTTGCGAACGTATTCTTTTTTTGAAGTTTACTGTCATTTTTCTGTCTTGTCTCGGATTATTTGGTTGCTAATGTAGCTGAAGTTGCAGTTTTTGTTTTGGCAATATCTTCCTTGTTGTTTTTTAGGTTCTGGTTTGTATTAGCATTTCATAGACCATCTATTGTCATCAGTTTGCATTTTTTATCTAAAATGATTTAGGAATGGTAATCATTTTTCCAGAATTGGTTTTTTGCATTCTTACGTTTTCTGTACTTGTGCAGGTTGGAGCCCCTGCTCGTGTTGGTTTGGTTGCTCCCATTGATGTCATCGTCCCACCAGGCAACACAGGGCTTGATCCATCTCAGACCTCTTTCTTCCAGGTTTGTGAATTTGATTACTTAGTAATCCTTTTCTATGAATGGACTCTGAGCTTTTGAATTCTTCTTCTTGCAGGTTCTTAATATCCCAACTAAGATTAACAAGGGTACTGTCGAAATTATCACTCCTGTGGAACTTATTAAGAAGGGTGAGAAGGTTGGATCTTCTGAGGCCGCTCTCCTTGCCAAGCTCGGAATTAGGCCATTCTCGTATGGTCTTGTGGTACTCTCTGTTTATGACAATGGATCTGTCTTCAGCCCTGAGGTGCTTGATCTGACTGAGGATGATCTCCTGGAGAAATTTGCAATGGGTGTTTCCATGGTCACATCCTTGTCTTTGGCCGTTTCATACCCAACTCTGGCTGCTGCACCACACATGCTCATCAATGCATACAAAAATCTTCTTGCTGTTGCAGTTGCTACTGACTACTCCTTCCCTCAGGCTGAGAAAGTTAAAGAGTATCTCGAGGTATGTTGTCCATTTTTATGTTCTTTGGCTTGGTTTAAAATGCTAATGACAAAATCACCAATTGCTGTTCTTTTTACTTGTACAGGATCCTAGTAAGTTTGCTGTCGCTGTGGCCGTGTCTGCTGCTGATTCTGGCGCTGCCCCTGCTGCTGCTGCAGCTGTGGAGGAGAAGAAGGAAGAGCCAGCAGAAGAGTCTGACGACGACATGGGTTTCAGCTTGTTTGATTAATCTGTACGTTAGAGATATAGTAGCTTTTGTGTTTTGCGTCTTTTAGACTCACAAATTGGAGTTTCCATTATGTTTTTCGGAGTTGTATTTTTCAGCTGAATTATTTTAGGTTTTCGTCAAATGGATTTGCTTAAATTTTGAGATTTTTTATGGTTTTCGTTCTTTATTTTTGATCATTTTTTTAATCCGTTTCTTAAGTGCTA

mRNA sequence

ATCAAGTATATAAAGCGAACCAGCGCCCACTTTCATCTTCCATCAGCCTGCTAAGCTCCCCAGGAGTTGTCCAAAACCCTAGAAAAACTTCTTAGCACAACAGAGGTTAAAGAGACGGCATAGCTTCGCTGTCCGCCTTGACAGAGCCACTAGCTTCTTCTTGGCCCTCGGTTTTGCTTCTCTTCTTTCTTTTATAGACATTTTTGTTGTATCTTCGATTTTCATCACAAACACATTTCAATGGCTGTGAAACCCACCAAGGCTGAAAAGAAGGTCGCTTACGACTCCAAGCTTTGCCAGCTCCTCGATGAGTACAGTCAGGTCTTGATTGTGGCCGCTGACAATGTTGGATCTAACCAGCTCCAGAACATTAGGAAGGGTCTTCGTGGTGACTCTGTTGTGCTCATGGGTAAAAATACCATGATGAAGCGGTCTGTGAGGATTCACGCTGAGAACACTGGAAACAAGGCTTACCTCAATCTTCTTCCTCTTCTTGTGGGAAACGTTGGTTTGATCTTCACCAAGGGTGATTTGAAGGAAGTCAGTGAGGAGGTTGCCAAATACAAGGTTGGAGCCCCTGCTCGTGTTGGTTTGGTTGCTCCCATTGATGTCATCGTCCCACCAGGCAACACAGGGCTTGATCCATCTCAGACCTCTTTCTTCCAGGTTCTTAATATCCCAACTAAGATTAACAAGGGTACTGTCGAAATTATCACTCCTGTGGAACTTATTAAGAAGGGTGAGAAGGTTGGATCTTCTGAGGCCGCTCTCCTTGCCAAGCTCGGAATTAGGCCATTCTCGTATGGTCTTGTGGTACTCTCTGTTTATGACAATGGATCTGTCTTCAGCCCTGAGGTGCTTGATCTGACTGAGGATGATCTCCTGGAGAAATTTGCAATGGGTGTTTCCATGGTCACATCCTTGTCTTTGGCCGTTTCATACCCAACTCTGGCTGCTGCACCACACATGCTCATCAATGCATACAAAAATCTTCTTGCTGTTGCAGTTGCTACTGACTACTCCTTCCCTCAGGCTGAGAAAGTTAAAGAGTATCTCGAGGATCCTAGTAAGTTTGCTGTCGCTGTGGCCGTGTCTGCTGCTGATTCTGGCGCTGCCCCTGCTGCTGCTGCAGCTGTGGAGGAGAAGAAGGAAGAGCCAGCAGAAGAGTCTGACGACGACATGGGTTTCAGCTTGTTTGATTAATCTGTACGTTAGAGATATAGTAGCTTTTGTGTTTTGCGTCTTTTAGACTCACAAATTGGAGTTTCCATTATGTTTTTCGGAGTTGTATTTTTCAGCTGAATTATTTTAGGTTTTCGTCAAATGGATTTGCTTAAATTTTGAGATTTTTTATGGTTTTCGTTCTTTATTTTTGATCATTTTTTTAATCCGTTTCTTAAGTGCTA

Coding sequence (CDS)

ATGGCTGTGAAACCCACCAAGGCTGAAAAGAAGGTCGCTTACGACTCCAAGCTTTGCCAGCTCCTCGATGAGTACAGTCAGGTCTTGATTGTGGCCGCTGACAATGTTGGATCTAACCAGCTCCAGAACATTAGGAAGGGTCTTCGTGGTGACTCTGTTGTGCTCATGGGTAAAAATACCATGATGAAGCGGTCTGTGAGGATTCACGCTGAGAACACTGGAAACAAGGCTTACCTCAATCTTCTTCCTCTTCTTGTGGGAAACGTTGGTTTGATCTTCACCAAGGGTGATTTGAAGGAAGTCAGTGAGGAGGTTGCCAAATACAAGGTTGGAGCCCCTGCTCGTGTTGGTTTGGTTGCTCCCATTGATGTCATCGTCCCACCAGGCAACACAGGGCTTGATCCATCTCAGACCTCTTTCTTCCAGGTTCTTAATATCCCAACTAAGATTAACAAGGGTACTGTCGAAATTATCACTCCTGTGGAACTTATTAAGAAGGGTGAGAAGGTTGGATCTTCTGAGGCCGCTCTCCTTGCCAAGCTCGGAATTAGGCCATTCTCGTATGGTCTTGTGGTACTCTCTGTTTATGACAATGGATCTGTCTTCAGCCCTGAGGTGCTTGATCTGACTGAGGATGATCTCCTGGAGAAATTTGCAATGGGTGTTTCCATGGTCACATCCTTGTCTTTGGCCGTTTCATACCCAACTCTGGCTGCTGCACCACACATGCTCATCAATGCATACAAAAATCTTCTTGCTGTTGCAGTTGCTACTGACTACTCCTTCCCTCAGGCTGAGAAAGTTAAAGAGTATCTCGAGGATCCTAGTAAGTTTGCTGTCGCTGTGGCCGTGTCTGCTGCTGATTCTGGCGCTGCCCCTGCTGCTGCTGCAGCTGTGGAGGAGAAGAAGGAAGAGCCAGCAGAAGAGTCTGACGACGACATGGGTTTCAGCTTGTTTGATTAA

Protein sequence

MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAAPHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVEEKKEEPAEESDDDMGFSLFD

Homology

[Close]

BLAST of CmoCh04G011920 vs. ExPASy Swiss-Prot
Match: P50346 (60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 6.7e-152
Identity = 279/320 (87.19%), Postives = 300/320 (93.75%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MA K TKAEKK+AYD+KLC L++EY Q+L+V +DNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVR+HAE TGN AYLNL+PLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI+KG+KVGSSEAALLAK
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDL+ KFA GVSMVTSLSLA+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300
           PHM +NAYKN+LAVAV TDYSFP+A+KVKEYL+DPSKFAVA   + A +  APAAAA  E
Sbjct: 241 PHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASGAPAAAAKEE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CmoCh04G011920 vs. ExPASy Swiss-Prot
Match: P41095 (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP0 PE=1 SV=3)

HSP 1 Score: 509.2 bits (1310), Expect = 3.3e-143
Identity = 261/320 (81.56%), Postives = 294/320 (91.88%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MA+K TKAEKKVAYD KLCQLLDEY++VLI  ADNVGSNQLQ IRKGLRGDS+VLMGKNT
Sbjct: 1   MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           +++R +++HA+NTGNK +L L+PLLVGNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  LIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           P+DV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSE+ALLAK
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLV+ +VYD+GSVFSPEVLDLTEDDL+EKFA GVSMV S+SLA+SYPT+AAA
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300
           PHM +N YKN+LAVAV T+YS+P A+K+KEYL+DPSKFAVA  V AADSGAA  +AA  E
Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPV-AADSGAAAPSAAKEE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEP EESD D+G SLFD
Sbjct: 301 EKKEEPEEESDGDLGMSLFD 319

[Close]

BLAST of CmoCh04G011920 vs. ExPASy Swiss-Prot
Match: P57691 (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 7.4e-143
Identity = 271/321 (84.42%), Postives = 294/321 (91.59%), Query Frame = 0


Query: 3   VKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMM 62
           VK TKAEKK+AYD+KLCQL+DEY+Q+L+VAADNVGS QLQNIRKGLRGDSVVLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIH+EN+GN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVFSPEVLDLTED L+EKFA G+SMVTSL+LAVSYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPA---AAAAV 302
           M INAYKN LA+AVATDY+FPQAEKVKE+L+DPSKF VA A  +AD+G   A   AAA V
Sbjct: 242 MFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKV 301

Query: 303 EEKKEEPAEESDDDMGFSLFD 321
           EEKKEE ++E D + GF LFD
Sbjct: 302 EEKKEE-SDEEDYEGGFGLFD 321

[Close]

BLAST of CmoCh04G011920 vs. ExPASy Swiss-Prot
Match: O04204 (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 4.8e-142
Identity = 266/319 (83.39%), Postives = 291/319 (91.22%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVK TKAEKK+ YDSKLCQLL+EYSQ+L+VAADNVGS QLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHA+ TGN+A+L+LLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLVV SVYDNGSVF+PEVL+LTEDDL+EKFA GVSM+T+LSLA+SYPT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300
           PHM +NAYKN+LAVA+AT+YSFPQAE VKE+L+DP+KFAVAVA   +        A AVE
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAVE 300

Query: 301 EKKEEPAEESDDDMGFSLF 320
              EE AEESD DMGF LF
Sbjct: 301 ---EEAAEESDGDMGFDLF 316

[Close]

BLAST of CmoCh04G011920 vs. ExPASy Swiss-Prot
Match: Q42112 (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 SV=2)

HSP 1 Score: 503.8 bits (1296), Expect = 1.4e-141
Identity = 270/319 (84.64%), Postives = 291/319 (91.22%), Query Frame = 0


Query: 3   VKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMM 62
           VK TKAEKK+AYD+KLCQL+DEY+Q+L+VAADNVGS QLQNIRKGLRGDSVVLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIH+ENTGN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVFSPEVLDLTED L+EKFA G+SMVTSL+LAVSYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVA-VAVSAADSGAAPAAAAAVEE 302
           M INAYKN LA+AVAT+Y+FPQAEKVKEYL+DPSKFAVA VA  +AD+G    AAA VEE
Sbjct: 242 MFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVEE 301

Query: 303 KKEEPAEESDDDMGFSLFD 321
           K+E   E+   D  F LFD
Sbjct: 302 KEESDEEDYGGD--FGLFD 318

[Close]

BLAST of CmoCh04G011920 vs. ExPASy TrEMBL
Match: A0A6J1H1U9 (60S acidic ribosomal protein P0 OS=Cucurbita moschata OX=3662 GN=LOC111458814 PE=3 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.2e-167
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CmoCh04G011920 vs. ExPASy TrEMBL
Match: A0A6J1J9L0 (60S acidic ribosomal protein P0 OS=Cucurbita maxima OX=3661 GN=LOC111484789 PE=3 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 2.6e-167
Identity = 319/320 (99.69%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFA+GVSMVTSLSLAVSYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFALGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CmoCh04G011920 vs. ExPASy TrEMBL
Match: A0A5D3BEN1 (60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00300 PE=3 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 3.9e-163
Identity = 307/320 (95.94%), Postives = 317/320 (99.06%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MA+KPTKAEKKVAYDSKLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSP+VLDLTEDDLLEKFA+GVSMVTSLSLA+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFP+AEKVKEYL DPSKFAVAVAVSAADSG+AP AAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPEAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CmoCh04G011920 vs. ExPASy TrEMBL
Match: A0A0A0KM27 (60S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_5G199310 PE=3 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 3.9e-163
Identity = 307/320 (95.94%), Postives = 317/320 (99.06%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MA+KPTKAEKKVAYDSKLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSP+VLDLTEDDLLEKFA+GVSMVTSLSLA+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYL DPSKFAVAVAVS+ADSG+AP AAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSSADSGSAPEAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CmoCh04G011920 vs. ExPASy TrEMBL
Match: A0A1S3CIR4 (60S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103501429 PE=3 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 3.9e-163
Identity = 307/320 (95.94%), Postives = 317/320 (99.06%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MA+KPTKAEKKVAYDSKLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSP+VLDLTEDDLLEKFA+GVSMVTSLSLA+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFP+AEKVKEYL DPSKFAVAVAVSAADSG+AP AAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPEAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CmoCh04G011920 vs. NCBI nr
Match: XP_022957404.1 (60S acidic ribosomal protein P0 [Cucurbita moschata] >KAG6600936.1 hypothetical protein SDJN03_06169, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031572.1 hypothetical protein SDJN02_05613 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 599.0 bits (1543), Expect = 2.4e-167
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CmoCh04G011920 vs. NCBI nr
Match: XP_022987157.1 (60S acidic ribosomal protein P0 [Cucurbita maxima])

HSP 1 Score: 597.8 bits (1540), Expect = 5.4e-167
Identity = 319/320 (99.69%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFA+GVSMVTSLSLAVSYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFALGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CmoCh04G011920 vs. NCBI nr
Match: XP_023534812.1 (60S acidic ribosomal protein P0 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 592.4 bits (1526), Expect = 2.3e-165
Identity = 319/323 (98.76%), Postives = 320/323 (99.07%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAP---AAAA 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAP   AAAA
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAAA 300

Query: 301 AVEEKKEEPAEESDDDMGFSLFD 321
           AVEEKK+EPAEESDDDMGFSLFD
Sbjct: 301 AVEEKKDEPAEESDDDMGFSLFD 323

[Close]

BLAST of CmoCh04G011920 vs. NCBI nr
Match: XP_038892643.1 (60S acidic ribosomal protein P0 [Benincasa hispida])

HSP 1 Score: 587.8 bits (1514), Expect = 5.6e-164
Identity = 314/321 (97.82%), Postives = 319/321 (99.38%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVKPTKAEKKVAYDSKLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFA+GVSMVTSLSLA+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVS-AADSGAAPAAAAAV 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVS AADSGAAPAAAAAV
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAAADSGAAPAAAAAV 300

Query: 301 EEKKEEPAEESDDDMGFSLFD 321
           EEKKEEPAEESDDDMGFSLFD
Sbjct: 301 EEKKEEPAEESDDDMGFSLFD 321

[Close]

BLAST of CmoCh04G011920 vs. NCBI nr
Match: XP_008463223.1 (PREDICTED: 60S acidic ribosomal protein P0 [Cucumis melo] >KAA0037392.1 60S acidic ribosomal protein P0 [Cucumis melo var. makuwa] >TYJ97519.1 60S acidic ribosomal protein P0 [Cucumis melo var. makuwa])

HSP 1 Score: 583.9 bits (1504), Expect = 8.1e-163
Identity = 307/320 (95.94%), Postives = 317/320 (99.06%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MA+KPTKAEKKVAYDSKLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSP+VLDLTEDDLLEKFA+GVSMVTSLSLA+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFP+AEKVKEYL DPSKFAVAVAVSAADSG+AP AAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPEAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CmoCh04G011920 vs. TAIR 10
Match: AT3G11250.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 508.1 bits (1307), Expect = 5.3e-144
Identity = 271/321 (84.42%), Postives = 294/321 (91.59%), Query Frame = 0


Query: 3   VKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMM 62
           VK TKAEKK+AYD+KLCQL+DEY+Q+L+VAADNVGS QLQNIRKGLRGDSVVLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIH+EN+GN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVFSPEVLDLTED L+EKFA G+SMVTSL+LAVSYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPA---AAAAV 302
           M INAYKN LA+AVATDY+FPQAEKVKE+L+DPSKF VA A  +AD+G   A   AAA V
Sbjct: 242 MFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKV 301

Query: 303 EEKKEEPAEESDDDMGFSLFD 321
           EEKKEE ++E D + GF LFD
Sbjct: 302 EEKKEE-SDEEDYEGGFGLFD 321

[Close]

BLAST of CmoCh04G011920 vs. TAIR 10
Match: AT2G40010.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 505.4 bits (1300), Expect = 3.4e-143
Identity = 266/319 (83.39%), Postives = 291/319 (91.22%), Query Frame = 0


Query: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60
           MAVK TKAEKK+ YDSKLCQLL+EYSQ+L+VAADNVGS QLQNIRKGLRGDSVVLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHA+ TGN+A+L+LLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240
           LGIRPFSYGLVV SVYDNGSVF+PEVL+LTEDDL+EKFA GVSM+T+LSLA+SYPT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300
           PHM +NAYKN+LAVA+AT+YSFPQAE VKE+L+DP+KFAVAVA   +        A AVE
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAVE 300

Query: 301 EKKEEPAEESDDDMGFSLF 320
              EE AEESD DMGF LF
Sbjct: 301 ---EEAAEESDGDMGFDLF 316

[Close]

BLAST of CmoCh04G011920 vs. TAIR 10
Match: AT3G09200.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 503.8 bits (1296), Expect = 1.0e-142
Identity = 270/319 (84.64%), Postives = 291/319 (91.22%), Query Frame = 0


Query: 3   VKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMM 62
           VK TKAEKK+AYD+KLCQL+DEY+Q+L+VAADNVGS QLQNIRKGLRGDSVVLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIH+ENTGN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVFSPEVLDLTED L+EKFA G+SMVTSL+LAVSYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVA-VAVSAADSGAAPAAAAAVEE 302
           M INAYKN LA+AVAT+Y+FPQAEKVKEYL+DPSKFAVA VA  +AD+G    AAA VEE
Sbjct: 242 MFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVEE 301

Query: 303 KKEEPAEESDDDMGFSLFD 321
           K+E   E+   D  F LFD
Sbjct: 302 KEESDEEDYGGD--FGLFD 318

[Close]

BLAST of CmoCh04G011920 vs. TAIR 10
Match: AT3G09200.2 (Ribosomal protein L10 family protein )

HSP 1 Score: 427.2 bits (1097), Expect = 1.2e-119
Identity = 238/319 (74.61%), Postives = 259/319 (81.19%), Query Frame = 0


Query: 3   VKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMM 62
           VK TKAEKK+AYD+KLCQL+DEY+Q+L+                                
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILV-------------------------------- 61

Query: 63  KRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
            RSVRIH+ENTGN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  -RSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVFSPEVLDLTED L+EKFA G+SMVTSL+LAVSYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVA-VAVSAADSGAAPAAAAAVEE 302
           M INAYKN LA+AVAT+Y+FPQAEKVKEYL+DPSKFAVA VA  +AD+G    AAA VEE
Sbjct: 242 MFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVEE 285

Query: 303 KKEEPAEESDDDMGFSLFD 321
           K+E   E+   D  F LFD
Sbjct: 302 KEESDEEDYGGD--FGLFD 285

[Close]

BLAST of CmoCh04G011920 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 47.4 bits (111), Expect = 2.6e-05
Identity = 28/41 (68.29%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 280 VAVAVSAADSGAAPAAAAAVEEKKEEPAEESDDDMGFSLFD 321
           VA A  AA  GAA AA AA E+KK+EPAEESD D+GF LFD
Sbjct: 73  VAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

The following BLAST results are available for this feature:

BLAST of CmoCh04G011920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P50346	6.7e-152	87.19	60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1	[more]
P41095	3.3e-143	81.56	60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP...	[more]
P57691	7.4e-143	84.42	60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 ...	[more]
O04204	4.8e-142	83.39	60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 ...	[more]
Q42112	1.4e-141	84.64	60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 ...	[more]

BLAST of CmoCh04G011920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1U9	1.2e-167	100.00	60S acidic ribosomal protein P0 OS=Cucurbita moschata OX=3662 GN=LOC111458814 PE...	[more]
A0A6J1J9L0	2.6e-167	99.69	60S acidic ribosomal protein P0 OS=Cucurbita maxima OX=3661 GN=LOC111484789 PE=3...	[more]
A0A5D3BEN1	3.9e-163	95.94	60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KM27	3.9e-163	95.94	60S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_5G199310 PE=3 ...	[more]
A0A1S3CIR4	3.9e-163	95.94	60S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103501429 PE=3 SV=...	[more]

BLAST of CmoCh04G011920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957404.1	2.4e-167	100.00	60S acidic ribosomal protein P0 [Cucurbita moschata] >KAG6600936.1 hypothetical ...	[more]
XP_022987157.1	5.4e-167	99.69	60S acidic ribosomal protein P0 [Cucurbita maxima]	[more]
XP_023534812.1	2.3e-165	98.76	60S acidic ribosomal protein P0 [Cucurbita pepo subsp. pepo]	[more]
XP_038892643.1	5.6e-164	97.82	60S acidic ribosomal protein P0 [Benincasa hispida]	[more]
XP_008463223.1	8.1e-163	95.94	PREDICTED: 60S acidic ribosomal protein P0 [Cucumis melo] >KAA0037392.1 60S acid...	[more]

BLAST of CmoCh04G011920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11250.1	5.3e-144	84.42	Ribosomal protein L10 family protein	[more]
AT2G40010.1	3.4e-143	83.39	Ribosomal protein L10 family protein	[more]
AT3G09200.1	1.0e-142	84.64	Ribosomal protein L10 family protein	[more]
AT3G09200.2	1.2e-119	74.61	Ribosomal protein L10 family protein	[more]
AT5G47700.1	2.6e-05	68.29	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR030670	60S acidic ribosomal protein P0	PIRSF	PIRSF039087	L10E	coord: 1..320 e-value: 3.1E-136 score: 451.4
IPR043141	Ribosomal protein L10-like domain superfamily	GENE3D	3.30.70.1730		coord: 6..209 e-value: 1.3E-48 score: 166.2
IPR043141	Ribosomal protein L10-like domain superfamily	SUPERFAMILY	160369	Ribosomal protein L10-like	coord: 8..134
IPR040637	60S ribosomal protein L10P, insertion domain	PFAM	PF17777	RL10P_insert	coord: 114..183 e-value: 7.4E-21 score: 74.0
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 234..319 e-value: 5.2E-21 score: 75.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..320
None	No IPR available	PANTHER	PTHR45699:SF18	60S ACIDIC RIBOSOMAL PROTEIN P0-1	coord: 1..320
None	No IPR available	PANTHER	PTHR45699	60S ACIDIC RIBOSOMAL PROTEIN P0	coord: 1..320
None	No IPR available	CDD	cd05795	Ribosomal_P0_L10e	coord: 9..185 e-value: 2.41622E-88 score: 260.198
IPR043164	50S ribosomal protein L10, insertion domain superfamily	GENE3D	3.90.105.20		coord: 114..185 e-value: 1.6E-33 score: 116.2
IPR001790	Ribosomal protein L10P	PFAM	PF00466	Ribosomal_L10	coord: 8..108 e-value: 5.0E-19 score: 68.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G011920.1	CmoCh04G011920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome