CmoCh04G011350 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTACATTCATCCTCTCTTCCACATATATGATCGAAGTAATGATTTAGGGTTTACTTGGAATGATTTGGCTTCTACCATTTAGTTCAATCTTAGTATGCATGTAATGATTTGGCTTCTACCATTTAGTTCCTACTCTTCCGATGTTCTGGTGAAACATTGGTTTATGTCTATAATGTAATGATTTTCTAGGACACAAATGATTTTTTATTATTATTAAGAAGCTTAATCGTTACTATTTTAGTTATAAATTGTACAATTAAGAATTGAACCATTGACTTTTTAGATAGTAATTAATGTTTTATCTACTATGGTGTGTGGTAGGGGCGTTGATGATCCGGCATTATGGGCTCCCAGAGTTGGAAATAGTTGGCGTACAACAATTGATATAAGTGATTCATGGGAAAGGTTAGGTTTAAATCTAACCCTAAAATCTTCCCATTATTGCCATAAATAACCCCTAAAATGTTGCATTAACTTCAAAAAAATTGTTTTTTGTTTTGGTTGAAGCATGACTAGAATTGCAGATATCAACGATAAGTGGGCAGAGTATGCAGGACCTGGTGGTTGGAATGGTATGAGATTGATTGTGTTTGAAACCCATTCAACTTCATCCATTTGTTCTCTAAGTTGATCTCTAATTCCCATCTTACCATGTGTGCGTGGACAGATCCAGATATGTTGGAAGTTGGCAATGGTGGCATGACCTATCAAGAATACAGAAGCCATTTTAGCATATGGGCTTTAATGAAGGTTTCAATTTTACTGTAACGATAGAATTTGAAAATTTTCTTAGGTATACGGCCAACAGATCAGATCAGAAGCTTGAATACTATTTGAATATTAACAAATAAGGAACTCAGATAAAAATAGCATAATAAGATTTACTTTCTAAAAACAAAAAGTCAAATGGTTATCAAACATGCACGTTTTGAGTTCATCCAAATGTGCATGCAGGCCCCTCTGTTGATTGGTTGTGATGTGAGAAACATGTCTCCACAAACTTTGGAAATTCTAAGCAATAAGGAAGTCATTGATGTAAACCAAGGTGATCAACATTTATTTATACTATCTTTTCTTATCTTATACTATCTTATACCCTTTTAAACAAGAACACTTAATATTTGCTCACATATCAAAAGGGAAACTTAATTTATGAACGCAGATAGTCTTGGGCTCCAGGGAAGAAAAATTAAAGTTTCTGGCAAAGATGGTTGTCTTCAGGTACTCTTTTTAACTTTTGCTTCATCTTACATTGTATTAAGCATAACAAAGGTATGAATTTAAACTTCAAACTCGTCTTATTTAGTTTACAGTTTTTATTAGATCGTTAAACTTTCTGGTGTTTCTTAGGTGTGGGTTTAGGTGTTTGGTGAACGAGTCAATGAGTGAGGCATGCAAACCAGCAAAAAAAAAAAAAAAAAAAAACCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAACCTACACAAGAAACACCAAGAAAAACCTAAACCCATTTAAAACCAATTTACCCCACCGTCCTTATAAATCTAGTCAACGTGCATGAGTGTTACACTAACAGAATTAACGACAGATATATTTTATTACACACAAAATTAAAAATTTCAAACGCTTGACAAAAAACTTATAGTTTAAGGACTATAAGTACATTTATATCGCCTACACTTTGCTAGATTAATATTTTATTTTGGCACATAAGAAGAGAACAGCATGACTTACAATGGCTCCATGAGAAGCAAAGTAAAAGGAAAGAGTTGTGACTTACAGGTGTGGGCAGGTCTCTTATCAAGTTCTGCACCTGAGATTCGCTTGGCTATTGTTCTTTGGAATCGATGTTCAACTGCTTCAATGATCTCCGTAAGCTGGCTTGAACTTGGAGTTATATTTGACATCATTGTCTCAGTAAGGGACTTATGGGAGGTCAGGATCCTAGCTCATCTAAACTAATTTACTCAGTATGCATGAACCGATATTCTCATCTTAGTTAACGACTTCTATGAAGCATCGACACTTTAGTTTAAATGACATGACAATGTGCCTATGTCTTGTGTCTGTGTACGTGCTTCAGTCTTTAGTCTATCTTGGTGCAATGCAGTAGAAATATTAGAGTTGTTTAATCTAACTTGGTCGTCTCATCACCAATACTTGCAGCACAAATTTCTAGATAGCATTAGCCGTGATTCATTTGGGGCTGAAGTTGACTCTCATGACTGCAAGATGTATATCATGACGCATATCCCCTTGTTCCATTCTGAATCTTAGACAATGCTCAGAGACGGGAAGGCCAAGAGATTTAGGAAGTTGTGAAAGAGCTAGATTATGTCATTACTTAAATAAAAAGGGTATCTAGTTTCTCGATCTCTATTCCTTTATGTAAAAGGTAATCAAAAGTCGAGAGATTCGTATCCAACATGAGTCCTTTAAATCAACTAGTCTCTCTTTATAAGTGACTTCTGAGTGATAATAAAATATGTTGTGAAGTATTATTGAAGGGTGTTCCTATCTAGAACCTATCAGTTATACTATTGAATCTCTTTCTTAGTATCAACAGAAAATTTATACTATTAAGCTTTCGT ATGTTCAATCTTAGTATGCATGTAATGATTTGGCTTCTACCATTTAGTTCCTACTCTTCCGATGTTCTGGTGAAACATTGGTTTATGTCTATAATGGGCGTTGATGATCCGGCATTATGGGCTCCCAGAGTTGGAAATAGTTGGCGTACAACAATTGATATAAGTGATTCATGGGAAAGAATTGCAGATATCAACGATAAGTGGGCAGAGTATGCAGGACCTGGTGGTTGGAATGATCCAGATATGTTGGAAGTTGGCAATGGTGGCATGACCTATCAAGAATACAGAAGCCATTTTAGCATATGGGCTTTAATGAAGGCCCCTCTGTTGATTGGTTGTGATGTGAGAAACATGTCTCCACAAACTTTGGAAATTCTAAGCAATAAGGAAGTCATTGATATAGTCTTGGGCTCCAGGGAAGAAAAATTAAAGTTTCTGGCAAAGATGGTTGTCTTCAGGTGTGGGTTTAGGTGTTTGGTGAACGAGTCAATGAGTCTCTTATCAAGTTCTGCACCTGAGATTCGCTTGGCTATTGTTCTTTGGAATCGATGTTCAACTGCTTCAATGATCTCCGTAAGCTGGCTTGAACTTGGAGTTATATTTGACATCATTGTCTCAGTAAGGGACTTATGGGAGCACAAATTTCTAGATAGCATTAGCCGTGATTCATTTGGGGCTGAAGTTGACTCTCATGACTGCAAGATGTATATCATGACGCATATCCCCTTGTTCCATTCTGAATCTTAGACAATGCTCAGAGACGGGAAGGCCAAGAGATTTAGGAAGTTGTGAAAGAGCTAGATTATGTCATTACTTAAATAAAAAGGGTATCTAGTTTCTCGATCTCTATTCCTTTATGTAAAAGGTAATCAAAAGTCGAGAGATTCGTATCCAACATGAGTCCTTTAAATCAACTAGTCTCTCTTTATAAGTGACTTCTGAGTGATAATAAAATATGTTGTGAAGTATTATTGAAGGGTGTTCCTATCTAGAACCTATCAGTTATACTATTGAATCTCTTTCTTAGTATCAACAGAAAATTTATACTATTAAGCTTTCGT ATGTTCAATCTTAGTATGCATGTAATGATTTGGCTTCTACCATTTAGTTCCTACTCTTCCGATGTTCTGGTGAAACATTGGTTTATGTCTATAATGGGCGTTGATGATCCGGCATTATGGGCTCCCAGAGTTGGAAATAGTTGGCGTACAACAATTGATATAAGTGATTCATGGGAAAGAATTGCAGATATCAACGATAAGTGGGCAGAGTATGCAGGACCTGGTGGTTGGAATGATCCAGATATGTTGGAAGTTGGCAATGGTGGCATGACCTATCAAGAATACAGAAGCCATTTTAGCATATGGGCTTTAATGAAGGCCCCTCTGTTGATTGGTTGTGATGTGAGAAACATGTCTCCACAAACTTTGGAAATTCTAAGCAATAAGGAAGTCATTGATATAGTCTTGGGCTCCAGGGAAGAAAAATTAAAGTTTCTGGCAAAGATGGTTGTCTTCAGGTGTGGGTTTAGGTGTTTGGTGAACGAGTCAATGAGTCTCTTATCAAGTTCTGCACCTGAGATTCGCTTGGCTATTGTTCTTTGGAATCGATGTTCAACTGCTTCAATGATCTCCGTAAGCTGGCTTGAACTTGGAGTTATATTTGACATCATTGTCTCAGTAAGGGACTTATGGGAGCACAAATTTCTAGATAGCATTAGCCGTGATTCATTTGGGGCTGAAGTTGACTCTCATGACTGCAAGATGTATATCATGACGCATATCCCCTTGTTCCATTCTGAATCTTAG MFNLSMHVMIWLLPFSSYSSDVLVKHWFMSIMGVDDPALWAPRVGNSWRTTIDISDSWERIADINDKWAEYAGPGGWNDPDMLEVGNGGMTYQEYRSHFSIWALMKAPLLIGCDVRNMSPQTLEILSNKEVIDIVLGSREEKLKFLAKMVVFRCGFRCLVNESMSLLSSSAPEIRLAIVLWNRCSTASMISVSWLELGVIFDIIVSVRDLWEHKFLDSISRDSFGAEVDSHDCKMYIMTHIPLFHSES Homology
BLAST of CmoCh04G011350 vs. ExPASy Swiss-Prot
Match: Q8VXZ7 (Alpha-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=AGAL3 PE=1 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 6.3e-65 Identity = 122/221 (55.20%), Postives = 153/221 (69.23%), Query Frame = 0
BLAST of CmoCh04G011350 vs. ExPASy Swiss-Prot
Match: P14749 (Alpha-galactosidase OS=Cyamopsis tetragonoloba OX=3832 PE=1 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.7e-54 Identity = 104/210 (49.52%), Postives = 135/210 (64.29%), Query Frame = 0
BLAST of CmoCh04G011350 vs. ExPASy Swiss-Prot
Match: Q42656 (Alpha-galactosidase OS=Coffea arabica OX=13443 PE=1 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 4.2e-53 Identity = 107/213 (50.23%), Postives = 135/213 (63.38%), Query Frame = 0
BLAST of CmoCh04G011350 vs. ExPASy Swiss-Prot
Match: Q8RX86 (Alpha-galactosidase 2 OS=Arabidopsis thaliana OX=3702 GN=AGAL2 PE=1 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.4e-51 Identity = 104/210 (49.52%), Postives = 133/210 (63.33%), Query Frame = 0
BLAST of CmoCh04G011350 vs. ExPASy Swiss-Prot
Match: Q9FXT4 (Alpha-galactosidase OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0493600 PE=1 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.8e-51 Identity = 108/220 (49.09%), Postives = 137/220 (62.27%), Query Frame = 0
BLAST of CmoCh04G011350 vs. ExPASy TrEMBL
Match: A0A6J1FS41 (Alpha-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111447939 PE=3 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.7e-100 Identity = 191/222 (86.04%), Postives = 194/222 (87.39%), Query Frame = 0
BLAST of CmoCh04G011350 vs. ExPASy TrEMBL
Match: A0A6J1FXE1 (Alpha-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111447939 PE=3 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.7e-100 Identity = 191/222 (86.04%), Postives = 194/222 (87.39%), Query Frame = 0
BLAST of CmoCh04G011350 vs. ExPASy TrEMBL
Match: A0A6J1FQU0 (Alpha-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111447939 PE=3 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.7e-100 Identity = 191/222 (86.04%), Postives = 194/222 (87.39%), Query Frame = 0
BLAST of CmoCh04G011350 vs. ExPASy TrEMBL
Match: A0A6J1JG86 (Alpha-galactosidase OS=Cucurbita maxima OX=3661 GN=LOC111484225 PE=3 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 2.4e-99 Identity = 186/219 (84.93%), Postives = 192/219 (87.67%), Query Frame = 0
BLAST of CmoCh04G011350 vs. ExPASy TrEMBL
Match: A0A6J1CZ60 (Alpha-galactosidase OS=Momordica charantia OX=3673 GN=LOC111015929 PE=3 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 5.9e-82 Identity = 154/215 (71.63%), Postives = 173/215 (80.47%), Query Frame = 0
BLAST of CmoCh04G011350 vs. NCBI nr
Match: XP_022943110.1 (alpha-galactosidase 3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 374.4 bits (960), Expect = 7.6e-100 Identity = 191/222 (86.04%), Postives = 194/222 (87.39%), Query Frame = 0
BLAST of CmoCh04G011350 vs. NCBI nr
Match: XP_022943111.1 (alpha-galactosidase 3-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 374.4 bits (960), Expect = 7.6e-100 Identity = 191/222 (86.04%), Postives = 194/222 (87.39%), Query Frame = 0
BLAST of CmoCh04G011350 vs. NCBI nr
Match: XP_022943112.1 (alpha-galactosidase 3-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 374.4 bits (960), Expect = 7.6e-100 Identity = 191/222 (86.04%), Postives = 194/222 (87.39%), Query Frame = 0
BLAST of CmoCh04G011350 vs. NCBI nr
Match: XP_023529356.1 (alpha-galactosidase 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 374.0 bits (959), Expect = 9.9e-100 Identity = 190/222 (85.59%), Postives = 194/222 (87.39%), Query Frame = 0
BLAST of CmoCh04G011350 vs. NCBI nr
Match: XP_022986509.1 (alpha-galactosidase 3-like [Cucurbita maxima]) HSP 1 Score: 371.7 bits (953), Expect = 4.9e-99 Identity = 186/219 (84.93%), Postives = 192/219 (87.67%), Query Frame = 0
BLAST of CmoCh04G011350 vs. TAIR 10
Match: AT3G56310.2 (Melibiase family protein ) HSP 1 Score: 248.8 bits (634), Expect = 4.5e-66 Identity = 122/221 (55.20%), Postives = 153/221 (69.23%), Query Frame = 0
BLAST of CmoCh04G011350 vs. TAIR 10
Match: AT3G56310.1 (Melibiase family protein ) HSP 1 Score: 248.8 bits (634), Expect = 4.5e-66 Identity = 122/221 (55.20%), Postives = 153/221 (69.23%), Query Frame = 0
BLAST of CmoCh04G011350 vs. TAIR 10
Match: AT5G08370.1 (alpha-galactosidase 2 ) HSP 1 Score: 204.5 bits (519), Expect = 9.7e-53 Identity = 104/210 (49.52%), Postives = 133/210 (63.33%), Query Frame = 0
BLAST of CmoCh04G011350 vs. TAIR 10
Match: AT5G08370.2 (alpha-galactosidase 2 ) HSP 1 Score: 204.5 bits (519), Expect = 9.7e-53 Identity = 104/210 (49.52%), Postives = 133/210 (63.33%), Query Frame = 0
BLAST of CmoCh04G011350 vs. TAIR 10
Match: AT5G08380.1 (alpha-galactosidase 1 ) HSP 1 Score: 184.1 bits (466), Expect = 1.4e-46 Identity = 96/205 (46.83%), Postives = 130/205 (63.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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