CmoCh04G009290 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G009290
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionVery-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
LocationCmo_Chr04: 4675013 .. 4679765 (+)
RNA-Seq ExpressionCmoCh04G009290
SyntenyCmoCh04G009290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGATTTTTGGCAACTATTCGGCGCCTGTACCTCTCCATCTACAATTGGACTCTCTTCGTCGGATGGTAAGTTCTTCCCCCTTCTCAATCACTTCCCTCTTCATATTTCTACTCGTAATGTAAAATTTTGTTTGGGTGTTGAAGGGTTCAGGTGTTCTACTTCTCAGTCAAGCAATTGAAGGAATCTGGTCACCAACAGGTATATAATGCCGTCGAACGTCCTCTTCAGTTTGCTCAAACTGCAGCTGTTTTAGAGGTATTCCCTGATCGTTTCTGGTTTATGAGCTGATTATCGTGATAGAGCCTATTATGAAGTATTTTATAATGATTTCTCGCATTTTTCTACTTCGCAGATTCTCCATGGCCTCGTTGGTAAGCTATATTTGATCCGCTTACAAGTTTTGGTGTCGAAGATTTTCTTTCTTTCCCTGATTGTAGCTTAGAAACGAAGCTGAATCGTGGGTTTTGGTTTTTGCCTAATTAGGGCTTGTGAGATCCCCTGTAACAGCAACGTTACCACAGATAGGTTCTAGATTGTATTTGACTTGGGGCATCTTATGGAGTTTCCCTGAGGTTGAAACCCTTCTTTTTCATTCAATTAGCCATAAATTAGTGTTTATGTTTGTAATTTTAATTGATAAAACTGATTACTTCTTGGGTCTGGCAGGTTAGGAATCATGTACTTGTTTCCTCCTTGGTCATCAGCTGGTCTATCACAGAGGCAAGTACATTTTTTTTACTGGAAACCTTAATTCCAAACTTAATTTACTCACTTTAGTTATTGATTATAACCTTTAACAAACCACAAGAGATGATCCAAGATTCTTTTTATAATGAATCTATGCTTATCGGCTTTATCGGCTTTATGTGTGTGTAACTCCAATGGTTGATGCTTTGTGATGGGCTTCTGATTTTTAGGAATTATGTACATTGTTAACTCAGTTTTTATTGTTAAGTTTGCCGACCATTGTATATTCTGTGAGATGATAATTTATTAGATCATCACTTCCTCATTCAAATTAGTAGATCTAGAATGTGTTTGACATGATTCGTAGAATTGTGAAAATTTGGTTACTTAATTCTTGCATGTTTAGGAGTGACTTTGAAATGGTCAAAAATCACTTCTTAGTGATTTTGCCATTCCAAACTTACTCTCAAACATGCTTGAGGAGTTTTGAAATGGTTAGGATTACTTTCATCATGTTCGAACCTACTCCAGAACATGCTTTAATCATTCATTCCAAATCAACTTAATGTTTGATTTTACAATTTTCATACCGTACAAATTGATTTTGAGTAATTAAAAACATGTTTCAGAGTTATTTTAAATGCGACAAAAGTGATTTTATCTACCTCAAAGTGTTCTTTTTGAAGTAGTTATAGAAAGAGTTAGATACTTAGAAATTCATTACAAACCAGTCCTAAGTTATGGAAAAAAGTTCCAAAATCTATCTATCAAGGCATACAGTTTTCAAGATGTACCATGGAGACGAATAAACAATTACTGACTTTATGTTGATATGCAATCTGTTGTGGATAAGTTCTATGTCTGGTTTCTTCGTCTTACCCTCCAATAGTTGAATGGTACAGTTAAAGGGAGAAGATTGAAGATTCTCTGAGTTGACACTTTTTACCAATCTTTGATTGCAGATTATCCGGTATTCATTTTATGGCATGAAGGAGGCGTTTGGTTTTGCACCTTCATTGCTCCTATGGCTAAGGTACTGGCTCCTTATGTAGTGGAGTGGAGTACAATTGGTCGGTGTTCTCTGCATCTGTGATATTAAAACTGTTCTCAATCATATCATGTAGGTATAGCACATTCCTCTTGCTGTATGTAACAGGCATCACTAGTGAAGTTGGTTTAGTCTATCTGGCTCTTCCTTACATGAAGGTAAGAAATCCAATGTCATGTTGTACACATGATTCACTCTTACGAATTCAATCCCAAACCGATCTTGGGCATGCTGCGTCGAAGTATACGTCGTTCCATTAGGAAGTTTGTCGTCATTTCAAATTGCAGTGAATGATCGTAATGAGTTGCTTTCAGGAATCTGGGAAGTATTCTTTTAGAATGCCAAACAAATGGAACTTTTCTTTCGATTACCTCTATGGAGCGATGCTTATTCTTGCAATCTACGTGCCAGGTTCAAGTTCTTGCTGCTTTTCTTTTGCTTATGTTTTTGTATTTGCTCCTTTTGGTAATACAGAAACTGTGTCCTGCAGGAAGTCCACATATGTACCGCTACATGCTTGTTCAGAGGTCAAAAGCTCTCTCAAAATCCAAAAAAGAGTAGGAAAAAATGAAGTTAATGTTATTCTCGGGTTCAGTTTGTCTTAATTCAGTGTACTTTCCGCATATTTATCCTTAATTTTCATTTTTGATCCTTAATTTTTATTTTTGATTGGCTTAGTCTTGTTAAGGACATTTTGTTTCCTCCCTTAATAAATTTGTCTACTGAGACTGCTTAATCAACTCTTAATCTAACTCTAATTAAGCTAATATGATTGATTTAATTATAATATTAAGATTAGTCGGATAATTGTTGTTCTGCTTTTGTGTGATTGTTTCTTTGAATTATTGTATGCTAAATCATTTATTACTCTCATTTAATTGTGTTGTTCTATTTATGGTTTTCTCTTTCTTATTGATATTCATTTATGAATGGTTTTCACATTTTATTTAATCATCTTATATTATTTTATATTTATATTATTTTATATTGACGGTTGAGAGCAATTTATTATTTTATTAATATATTTTGGTTGTAATGATGTGTAATGTTGAAGCTTTGAGTTGAGCTGTTTTTATTTGAAAATTTGCCAGAACTGTATATATTTTTTTGAAAATCAAAATATAACGTTCTAATAAGATTTTTAACTCATTAATTTAATTTGCAACCAGATATGTCATAATCAACGTCCTAATTTGTTTTAAAAATATATCTTTTTTAAATAAAAAAAAAAGTTGCAATACTATGATCTTTAATAAACATTTCTAAAGTAAAAATTTATAAATTAGTAACTAAAATGTTTGTCTAGATTTCATTTTGTTTGAGATGGGCATCAATGGAGACATCAATGGAGCAATTAAGCGGCCAATTAAGTCTTTCCATTTAAGTCATTCCATTTAAGTCAATGGAGCAATTAACGAATTAGGTGGGTCACCTACGGCCATCAATGTAGCAATTAAGTGGCTCACCAATTTTTATACTTATTTTCATTCGGCCCAAACTTTTAAAGCTACTCCGGCCCAAGCGCCCAAACTTTTAAAGCTACTCCGGCCCAAGCGCCCAAACTTTTAAAGCTACTCCGGCCCAAGCCTGTTTTTTAGCCCAAGAAAACCGGCCCATTTTTAGGGCTTCAAAACTATCATCTTCTTTCTTCTCTCCAGCCTCTTTTCTGCGTTTGCTCTCTCCGCCCATTTGTAACTTCCCTTTCTCTATTTATAGGGCTTCAAAACTCACCATCTTCCTTCTCCATTATCTTCCCCTCCTCTCTGCGTTTGCTCTCCGTCAATTTCGTAAGTCTCTTACTCTATTTTTTTTTCTTTATTTTTATTTTTATCATGTTTGCTGTGCGAGTTGGATCGAGTTGGATCATCTCTTGCCCCTCTCCTGTTTCTGCTAATTTTTGTAATTGTTGTGTTATTTTATCTCAGGCCATTTCTGGTAATTTTTGTTATTGCTGTATTTTTCTCTTGGATGTGTGATGATTCTCCCCCTTGTATATATATTTTTAACCCTATAAACTTGTCCAATCTCTATATCTTTTGTTGTTACTCATGGGTTTTGGATCCATTCAAATTTTATTAACAAACTAAATTAAAAAAATTGATTTGGATATATTAGATGAAGGTACTTCGAGCACTGGATCTGATGCCTTCTTCAAACCACCTCTCGGAGGAAGAGGAGGAAGAGATAGATTCGGACGATGAATTTTATCAAGACGGTTACCATACTATCACTAAGAAAGAAGAGAGGGAGTATTTTCGTGCAGTTGAAGAATCGGAGGTTTATTTTCTTTTAATTTTTCACTGGTCAAACTCAATATTTTTTTTCTTTATTTTTTCTTTTTTTAATCGAAGGATGTATGCAGGGTTTTGATGTACCAGATTTTGACAAAGTCTTTTCATGTAGTTTCATCATTCCAATAGATATGCATGAGAACTCGTGGATGCTTAAAGAGGTTCGAATCTCAGCAAATAAAGCTATCAAACATTACAACAAGGAAAATGTAATGTTCTGACTTGCTAGCTATGCTTTTTTTTTTTTTTTTTTTGTTTTATCATGTGAAAAAGAATTTGTCCACTCATGTATGTAAATATTTCTTTTATCTTCCTATAGATAGGGAACTAATTTTGAAGTAGTAGAGATTGTGAAATGTTTCTTTTATGTTTCTTTTATCTATAGGGAACTAATTTTGAAGTTGTAGAGATTGTGAAGGCGAATCATTCTGGATGTTGTGGCTCGATGTATTACATCACATTTAATGTGAAGCCGATTGGAACCTCGGCAGAATTTCCCCCAATAACCTTCCAAGCTAAAGTTTATTATGTTATTCCTATAAAAGATATTATAGACGTCAAACTTTGCAGACCAAAGTTCTTTAATTAGCGACCGATAAACTACTCATTACTTTTTATCATATCATTTTGGTTGGCTACTTGTTACTTTTTATTACTTTTTATCGTATCATTTTGTTTGGTTGTGAGGTCTGACAATATTATATAATTAAATATATTGGTG

mRNA sequence

ATGGCGGGATTTTTGGCAACTATTCGGCGCCTGTACCTCTCCATCTACAATTGGACTCTCTTCGTCGGATGGGTTCAGGTGTTCTACTTCTCAGTCAAGCAATTGAAGGAATCTGGTCACCAACAGGTATATAATGCCGTCGAACGTCCTCTTCAGTTTGCTCAAACTGCAGCTGTTTTAGAGATTCTCCATGGCCTCGTTGGGCTTGTGAGATCCCCTGTAACAGCAACGTTACCACAGATAGGAATCATGTACTTGTTTCCTCCTTGGTCATCAGCTGGTCTATCACAGAGGCAAATTATCCGGTATTCATTTTATGGCATGAAGGAGGCGTTTGGTTTTGCACCTTCATTGCTCCTATGGCTAAGGTATAGCACATTCCTCTTGCTGTATGTAACAGGCATCACTAGTGAAGTTGGTTTAGTCTATCTGGCTCTTCCTTACATGAAGGAATCTGGGAAGTATTCTTTTAGAATGCCAAACAAATGGAACTTTTCTTTCGATTACCTCTATGGAGCGATGCTTATTCTTGCAATCTACGTGCCAGGTTCAAGTTCTTGCTGCTTTTCTTTTGCTTATGTTTTTGTATTTGCTCCTTTTGGTAATACAGAAACTGTGTCCTGCAGGAAGTCCACATATGTACCGCTACATGCTTGTTCAGAGATGAAGGTACTTCGAGCACTGGATCTGATGCCTTCTTCAAACCACCTCTCGGAGGAAGAGGAGGAAGAGATAGATTCGGACGATGAATTTTATCAAGACGGTTACCATACTATCACTAAGAAAGAAGAGAGGGAGTATTTTCGTGCAGTTGAAGAATCGGAGGGTTTTGATGTACCAGATTTTGACAAAGTCTTTTCATGTAGTTTCATCATTCCAATAGATATGCATGAGAACTCGTGGATGCTTAAAGAGGTTCGAATCTCAGCAAATAAAGCTATCAAACATTACAACAAGGAAAATGGAACTAATTTTGAAGTTGTAGAGATTGTGAAGGCGAATCATTCTGGATGTTGTGGCTCGATGTATTACATCACATTTAATGTGAAGCCGATTGGAACCTCGGCAGAATTTCCCCCAATAACCTTCCAAGCTAAAGTTTATTATGTTATTCCTATAAAAGATATTATAGACGTCAAACTTTGCAGACCAAAGTTCTTTAATTAGCGACCGATAAACTACTCATTACTTTTTATCATATCATTTTGGTTGGCTACTTGTTACTTTTTATTACTTTTTATCGTATCATTTTGTTTGGTTGTGAGGTCTGACAATATTATATAATTAAATATATTGGTG

Coding sequence (CDS)

ATGGCGGGATTTTTGGCAACTATTCGGCGCCTGTACCTCTCCATCTACAATTGGACTCTCTTCGTCGGATGGGTTCAGGTGTTCTACTTCTCAGTCAAGCAATTGAAGGAATCTGGTCACCAACAGGTATATAATGCCGTCGAACGTCCTCTTCAGTTTGCTCAAACTGCAGCTGTTTTAGAGATTCTCCATGGCCTCGTTGGGCTTGTGAGATCCCCTGTAACAGCAACGTTACCACAGATAGGAATCATGTACTTGTTTCCTCCTTGGTCATCAGCTGGTCTATCACAGAGGCAAATTATCCGGTATTCATTTTATGGCATGAAGGAGGCGTTTGGTTTTGCACCTTCATTGCTCCTATGGCTAAGGTATAGCACATTCCTCTTGCTGTATGTAACAGGCATCACTAGTGAAGTTGGTTTAGTCTATCTGGCTCTTCCTTACATGAAGGAATCTGGGAAGTATTCTTTTAGAATGCCAAACAAATGGAACTTTTCTTTCGATTACCTCTATGGAGCGATGCTTATTCTTGCAATCTACGTGCCAGGTTCAAGTTCTTGCTGCTTTTCTTTTGCTTATGTTTTTGTATTTGCTCCTTTTGGTAATACAGAAACTGTGTCCTGCAGGAAGTCCACATATGTACCGCTACATGCTTGTTCAGAGATGAAGGTACTTCGAGCACTGGATCTGATGCCTTCTTCAAACCACCTCTCGGAGGAAGAGGAGGAAGAGATAGATTCGGACGATGAATTTTATCAAGACGGTTACCATACTATCACTAAGAAAGAAGAGAGGGAGTATTTTCGTGCAGTTGAAGAATCGGAGGGTTTTGATGTACCAGATTTTGACAAAGTCTTTTCATGTAGTTTCATCATTCCAATAGATATGCATGAGAACTCGTGGATGCTTAAAGAGGTTCGAATCTCAGCAAATAAAGCTATCAAACATTACAACAAGGAAAATGGAACTAATTTTGAAGTTGTAGAGATTGTGAAGGCGAATCATTCTGGATGTTGTGGCTCGATGTATTACATCACATTTAATGTGAAGCCGATTGGAACCTCGGCAGAATTTCCCCCAATAACCTTCCAAGCTAAAGTTTATTATGTTATTCCTATAAAAGATATTATAGACGTCAAACTTTGCAGACCAAAGTTCTTTAATTAG

Protein sequence

MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVLEILHGLVGLVRSPVTATLPQIGIMYLFPPWSSAGLSQRQIIRYSFYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWNFSFDYLYGAMLILAIYVPGSSSCCFSFAYVFVFAPFGNTETVSCRKSTYVPLHACSEMKVLRALDLMPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFDKVFSCSFIIPIDMHENSWMLKEVRISANKAIKHYNKENGTNFEVVEIVKANHSGCCGSMYYITFNVKPIGTSAEFPPITFQAKVYYVIPIKDIIDVKLCRPKFFN
Homology
[Close]
BLAST of CmoCh04G009290 vs. ExPASy Swiss-Prot
Match: Q7XSZ4 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A OS=Oryza sativa subsp. japonica OX=39947 GN=PAS2A PE=2 SV=2)

HSP 1 Score: 256.1 bits (653), Expect = 6.2e-67
Identity = 134/200 (67.00%), Postives = 154/200 (77.00%), Query Frame = 0 

Query: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60
           MAG  + +RRLYLS+YNW +F GW QV Y++V  L ESGH+ VY AVERPLQFAQTAA L
Sbjct: 1   MAGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL 60

Query: 61  EILHGLVGLVRSPVTATLPQI--------GIMYLFPPWSSAGL--------SQRQIIRYS 120
           EILHGLVGLVRSPV+ATLPQI        GI++ FP   S  L        S  +IIRYS
Sbjct: 61  EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYS 120

Query: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180
           F+GMKEAFGFAPS LLWLRYSTF++LY TGI+SEVGL+Y+ALPYMK S KY  RMPNKWN
Sbjct: 121 FFGMKEAFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKASEKYCLRMPNKWN 180

Query: 181 FSFDYLYGAMLILAIYVPGS 185
           FSFD+ Y ++L LAIYVPGS
Sbjct: 181 FSFDFFYASILSLAIYVPGS 200

[Close]
BLAST of CmoCh04G009290 vs. ExPASy Swiss-Prot
Match: Q5ZEJ0 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2B OS=Oryza sativa subsp. japonica OX=39947 GN=PAS2B PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.6e-65
Identity = 130/200 (65.00%), Postives = 152/200 (76.00%), Query Frame = 0 

Query: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60
           M G  + +RRLYLS+YNW +F GW QV Y++V  L ESGH+ VY AVERPLQFAQTAA L
Sbjct: 1   MTGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL 60

Query: 61  EILHGLVGLVRSPVTATLPQI--------GIMYLFPPWSSAGL--------SQRQIIRYS 120
           EILHGLVGLVRSPV+ATLPQI        GI++ FP   S  L        S  +IIRYS
Sbjct: 61  EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYS 120

Query: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180
           F+GMKE FGFAPS LLWLRYSTF++LY TGI+SEVGL+Y+ALPYMK + KY  RMPNKWN
Sbjct: 121 FFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKATEKYCLRMPNKWN 180

Query: 181 FSFDYLYGAMLILAIYVPGS 185
           FSFD+ Y ++L LA+YVPGS
Sbjct: 181 FSFDFSYASILSLAVYVPGS 200

[Close]
BLAST of CmoCh04G009290 vs. ExPASy Swiss-Prot
Match: Q8VZB2 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 OS=Arabidopsis thaliana OX=3702 GN=PAS2 PE=1 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.1e-63
Identity = 127/200 (63.50%), Postives = 152/200 (76.00%), Query Frame = 0 

Query: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60
           MAGFL+ +RR+YL++YNW +F GW QV Y ++  LKE+G++ VY+A+E+PLQ AQTAAVL
Sbjct: 1   MAGFLSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKETGYENVYDAIEKPLQLAQTAAVL 60

Query: 61  EILHGLVGLVRSPVTATLPQI--------GIMYLFPPWSSAGL--------SQRQIIRYS 120
           EILHGLVGLVRSPV+ATLPQI        GI+Y FP   S  L        S  +IIRYS
Sbjct: 61  EILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEIIRYS 120

Query: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180
           F+G KEA GFAPS  LWLRYS+FLLLY TGITSEVGL+YLALP++K S  YS RMPN  N
Sbjct: 121 FFGFKEALGFAPSWHLWLRYSSFLLLYPTGITSEVGLIYLALPHIKTSEMYSVRMPNILN 180

Query: 181 FSFDYLYGAMLILAIYVPGS 185
           FSFD+ Y  +L+LAIYVPGS
Sbjct: 181 FSFDFFYATILVLAIYVPGS 200

[Close]
BLAST of CmoCh04G009290 vs. ExPASy Swiss-Prot
Match: Q9D3B1 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Mus musculus OX=10090 GN=Hacd2 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 6.5e-24
Identity = 68/189 (35.98%), Postives = 105/189 (55.56%), Query Frame = 0 

Query: 12  YLSIYNWTLFVGWVQVFYFSVK-QLKESGHQQVYNAVERPLQFAQTAAVLEILHGLVGLV 71
           YL IYN  +  GW+ +    V+  L +  +  +Y ++ERPL+F QT A+LEILH  +G+V
Sbjct: 41  YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIERPLKFFQTGALLEILHCAIGIV 100

Query: 72  RSPVTATLPQIGIMYLFPPWSSA-----------------GLSQRQIIRYSFYGMKEAFG 131
            S V  T  Q+ +  +F  W+                     +  +IIRYSFY       
Sbjct: 101 PSSVVLTSFQV-MSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTF-SLLN 160

Query: 132 FAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWNFSFDYLYGA 183
             P ++ W RY+ F++LY  G+T E+  +Y ALP+++++G YS  +PNK+NFSFDY    
Sbjct: 161 HLPYIIKWARYTLFIVLYPMGVTGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYHAFL 220

[Close]
BLAST of CmoCh04G009290 vs. ExPASy Swiss-Prot
Match: Q2KIP8 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Bos taurus OX=9913 GN=HACD2 PE=2 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 1.1e-23
Identity = 67/189 (35.45%), Postives = 105/189 (55.56%), Query Frame = 0 

Query: 12  YLSIYNWTLFVGWVQVFYFSVK-QLKESGHQQVYNAVERPLQFAQTAAVLEILHGLVGLV 71
           YL IYN  +  GW+ +    V+  L +  +  +Y ++E+PL+F QT A+LEILH  +G+V
Sbjct: 41  YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 100

Query: 72  RSPVTATLPQIGIMYLFPPWSSA-----------------GLSQRQIIRYSFYGMKEAFG 131
            S V  T  Q+ +  +F  W+                     +  +IIRYSFY       
Sbjct: 101 PSSVVLTSIQV-MSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTF-SLLN 160

Query: 132 FAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWNFSFDYLYGA 183
             P L+ W RY+ F++LY  G++ E+  +Y ALP+++++G YS  +PNK+NFSFDY    
Sbjct: 161 HLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYAFL 220

[Close]
BLAST of CmoCh04G009290 vs. ExPASy TrEMBL
Match: A0A6J1FVU0 (uncharacterized protein LOC111447329 OS=Cucurbita moschata OX=3662 GN=LOC111447329 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.9e-90
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0 

Query: 222 MKVLRALDLMPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPD 281
           MKVLRALDLMPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPD
Sbjct: 60  MKVLRALDLMPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPD 119

Query: 282 FDKVFSCSFIIPIDMHENSWMLKEVRISANKAIKHYNKENGTNFEVVEIVKANHSGCCGS 341
           FDKVFSCSFIIPIDMHENSWMLKEVRISANKAIKHYNKENGTNFEVVEIVKANHSGCCGS
Sbjct: 120 FDKVFSCSFIIPIDMHENSWMLKEVRISANKAIKHYNKENGTNFEVVEIVKANHSGCCGS 179

Query: 342 MYYITFNVKPIGTSAEFPPITFQAKVYYVIPIKDIIDVKLCRPKFFN 389
           MYYITFNVKPIGTSAEFPPITFQAKVYYVIPIKDIIDVKLCRPKFFN
Sbjct: 180 MYYITFNVKPIGTSAEFPPITFQAKVYYVIPIKDIIDVKLCRPKFFN 226

[Close]
BLAST of CmoCh04G009290 vs. ExPASy TrEMBL
Match: A0A6J1FQM5 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111447328 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 8.9e-85
Identity = 172/200 (86.00%), Postives = 176/200 (88.00%), Query Frame = 0 

Query: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60
           MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL
Sbjct: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60

Query: 61  EILHGLVGLVRSPVTATLPQI--------GIMYLFPPWSSAGL--------SQRQIIRYS 120
           EILHGLVGLVRSPVTATLPQI        GI++ FP   +  L        S  +IIRYS
Sbjct: 61  EILHGLVGLVRSPVTATLPQIGSRLYLTWGILWSFPEVRNHVLVSSLVISWSITEIIRYS 120

Query: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180
           FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN
Sbjct: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180

Query: 181 FSFDYLYGAMLILAIYVPGS 185
           FSFDYLYGAMLILAIYVPGS
Sbjct: 181 FSFDYLYGAMLILAIYVPGS 200

[Close]
BLAST of CmoCh04G009290 vs. ExPASy TrEMBL
Match: A0A6J1FPD6 (UPF0725 protein At4g29550-like OS=Cucurbita moschata OX=3662 GN=LOC111447608 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 8.9e-85
Identity = 159/167 (95.21%), Postives = 162/167 (97.01%), Query Frame = 0 

Query: 222 MKVLRALDLMPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPD 281
           MKVLRALDLMPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPD
Sbjct: 1   MKVLRALDLMPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPD 60

Query: 282 FDKVFSCSFIIPIDMHENSWMLKEVRISANKAIKHYNKENGTNFEVVEIVKANHSGCCGS 341
           FDKVFS S I PIDMHE+SWMLKEVRISANKAIK+YNKENGTNFEVVEIVKANHSGCCGS
Sbjct: 61  FDKVFSYSLIAPIDMHEDSWMLKEVRISANKAIKYYNKENGTNFEVVEIVKANHSGCCGS 120

Query: 342 MYYITFNVKPIGTSAEFPPITFQAKVYYVIPIKDIIDVKLCRPKFFN 389
           MYYITFNVKPIGTSAEF PITFQAKVYY IPIKDIIDV+LCRPKFFN
Sbjct: 121 MYYITFNVKPIGTSAEFSPITFQAKVYYAIPIKDIIDVELCRPKFFN 167

[Close]
BLAST of CmoCh04G009290 vs. ExPASy TrEMBL
Match: A0A6J1IKY7 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111474885 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 2.6e-84
Identity = 171/200 (85.50%), Postives = 176/200 (88.00%), Query Frame = 0 

Query: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60
           MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL
Sbjct: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60

Query: 61  EILHGLVGLVRSPVTATLPQI--------GIMYLFPPWSSAGL--------SQRQIIRYS 120
           EILHGLVGLVRSPVTATLPQI        GI++ FP   +  L        S  +IIRYS
Sbjct: 61  EILHGLVGLVRSPVTATLPQIGSRLYLTWGILWSFPEVRNHVLVSSLVISWSITEIIRYS 120

Query: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180
           FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALP+MKESGKYSFRMPNKWN
Sbjct: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPFMKESGKYSFRMPNKWN 180

Query: 181 FSFDYLYGAMLILAIYVPGS 185
           FSFDYLYGAMLILAIYVPGS
Sbjct: 181 FSFDYLYGAMLILAIYVPGS 200

[Close]
BLAST of CmoCh04G009290 vs. ExPASy TrEMBL
Match: A0A6J1FX62 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111447818 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 2.6e-84
Identity = 171/200 (85.50%), Postives = 175/200 (87.50%), Query Frame = 0 

Query: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60
           MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL
Sbjct: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60

Query: 61  EILHGLVGLVRSPVTATLPQI--------GIMYLFPPWSSAGL--------SQRQIIRYS 120
           EILHGLVG VRSPVTATLPQI        GI++ FP   +  L        S  +IIRYS
Sbjct: 61  EILHGLVGFVRSPVTATLPQIGSRLYLTWGILWSFPEVRNHVLVSSLVISWSITEIIRYS 120

Query: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180
           FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN
Sbjct: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180

Query: 181 FSFDYLYGAMLILAIYVPGS 185
           FSFDYLYGAMLILAIYVPGS
Sbjct: 181 FSFDYLYGAMLILAIYVPGS 200

[Close]
BLAST of CmoCh04G009290 vs. NCBI nr
Match: XP_022942205.1 (uncharacterized protein LOC111447329 [Cucurbita moschata])

HSP 1 Score: 342.8 bits (878), Expect = 3.8e-90
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0 

Query: 222 MKVLRALDLMPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPD 281
           MKVLRALDLMPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPD
Sbjct: 60  MKVLRALDLMPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPD 119

Query: 282 FDKVFSCSFIIPIDMHENSWMLKEVRISANKAIKHYNKENGTNFEVVEIVKANHSGCCGS 341
           FDKVFSCSFIIPIDMHENSWMLKEVRISANKAIKHYNKENGTNFEVVEIVKANHSGCCGS
Sbjct: 120 FDKVFSCSFIIPIDMHENSWMLKEVRISANKAIKHYNKENGTNFEVVEIVKANHSGCCGS 179

Query: 342 MYYITFNVKPIGTSAEFPPITFQAKVYYVIPIKDIIDVKLCRPKFFN 389
           MYYITFNVKPIGTSAEFPPITFQAKVYYVIPIKDIIDVKLCRPKFFN
Sbjct: 180 MYYITFNVKPIGTSAEFPPITFQAKVYYVIPIKDIIDVKLCRPKFFN 226

[Close]
BLAST of CmoCh04G009290 vs. NCBI nr
Match: KAG6600692.1 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.9 bits (829), Expect = 1.8e-84
Identity = 172/200 (86.00%), Postives = 176/200 (88.00%), Query Frame = 0 

Query: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60
           MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL
Sbjct: 90  MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 149

Query: 61  EILHGLVGLVRSPVTATLPQI--------GIMYLFPPWSSAGL--------SQRQIIRYS 120
           EILHGLVGLVRSPVTATLPQI        GI++ FP   +  L        S  +IIRYS
Sbjct: 150 EILHGLVGLVRSPVTATLPQIGSRLYLTWGILWSFPEVRNHVLVSSLVISWSITEIIRYS 209

Query: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180
           FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN
Sbjct: 210 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 269

Query: 181 FSFDYLYGAMLILAIYVPGS 185
           FSFDYLYGAMLILAIYVPGS
Sbjct: 270 FSFDYLYGAMLILAIYVPGS 289

[Close]
BLAST of CmoCh04G009290 vs. NCBI nr
Match: XP_022942204.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 323.9 bits (829), Expect = 1.8e-84
Identity = 172/200 (86.00%), Postives = 176/200 (88.00%), Query Frame = 0 

Query: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60
           MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL
Sbjct: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60

Query: 61  EILHGLVGLVRSPVTATLPQI--------GIMYLFPPWSSAGL--------SQRQIIRYS 120
           EILHGLVGLVRSPVTATLPQI        GI++ FP   +  L        S  +IIRYS
Sbjct: 61  EILHGLVGLVRSPVTATLPQIGSRLYLTWGILWSFPEVRNHVLVSSLVISWSITEIIRYS 120

Query: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180
           FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN
Sbjct: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180

Query: 181 FSFDYLYGAMLILAIYVPGS 185
           FSFDYLYGAMLILAIYVPGS
Sbjct: 181 FSFDYLYGAMLILAIYVPGS 200

[Close]
BLAST of CmoCh04G009290 vs. NCBI nr
Match: XP_022942626.1 (UPF0725 protein At4g29550-like [Cucurbita moschata])

HSP 1 Score: 323.9 bits (829), Expect = 1.8e-84
Identity = 159/167 (95.21%), Postives = 162/167 (97.01%), Query Frame = 0 

Query: 222 MKVLRALDLMPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPD 281
           MKVLRALDLMPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPD
Sbjct: 1   MKVLRALDLMPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPD 60

Query: 282 FDKVFSCSFIIPIDMHENSWMLKEVRISANKAIKHYNKENGTNFEVVEIVKANHSGCCGS 341
           FDKVFS S I PIDMHE+SWMLKEVRISANKAIK+YNKENGTNFEVVEIVKANHSGCCGS
Sbjct: 61  FDKVFSYSLIAPIDMHEDSWMLKEVRISANKAIKYYNKENGTNFEVVEIVKANHSGCCGS 120

Query: 342 MYYITFNVKPIGTSAEFPPITFQAKVYYVIPIKDIIDVKLCRPKFFN 389
           MYYITFNVKPIGTSAEF PITFQAKVYY IPIKDIIDV+LCRPKFFN
Sbjct: 121 MYYITFNVKPIGTSAEFSPITFQAKVYYAIPIKDIIDVELCRPKFFN 167

[Close]
BLAST of CmoCh04G009290 vs. NCBI nr
Match: XP_022942935.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 322.4 bits (825), Expect = 5.4e-84
Identity = 171/200 (85.50%), Postives = 175/200 (87.50%), Query Frame = 0 

Query: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60
           MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL
Sbjct: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60

Query: 61  EILHGLVGLVRSPVTATLPQI--------GIMYLFPPWSSAGL--------SQRQIIRYS 120
           EILHGLVG VRSPVTATLPQI        GI++ FP   +  L        S  +IIRYS
Sbjct: 61  EILHGLVGFVRSPVTATLPQIGSRLYLTWGILWSFPEVRNHVLVSSLVISWSITEIIRYS 120

Query: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180
           FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN
Sbjct: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180

Query: 181 FSFDYLYGAMLILAIYVPGS 185
           FSFDYLYGAMLILAIYVPGS
Sbjct: 181 FSFDYLYGAMLILAIYVPGS 200

[Close]
BLAST of CmoCh04G009290 vs. TAIR 10
Match: AT5G10480.1 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 243.4 bits (620), Expect = 2.9e-64
Identity = 127/200 (63.50%), Postives = 152/200 (76.00%), Query Frame = 0 

Query: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60
           MAGFL+ +RR+YL++YNW +F GW QV Y ++  LKE+G++ VY+A+E+PLQ AQTAAVL
Sbjct: 1   MAGFLSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKETGYENVYDAIEKPLQLAQTAAVL 60

Query: 61  EILHGLVGLVRSPVTATLPQI--------GIMYLFPPWSSAGL--------SQRQIIRYS 120
           EILHGLVGLVRSPV+ATLPQI        GI+Y FP   S  L        S  +IIRYS
Sbjct: 61  EILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEIIRYS 120

Query: 121 FYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFRMPNKWN 180
           F+G KEA GFAPS  LWLRYS+FLLLY TGITSEVGL+YLALP++K S  YS RMPN  N
Sbjct: 121 FFGFKEALGFAPSWHLWLRYSSFLLLYPTGITSEVGLIYLALPHIKTSEMYSVRMPNILN 180

Query: 181 FSFDYLYGAMLILAIYVPGS 185
           FSFD+ Y  +L+LAIYVPGS
Sbjct: 181 FSFDFFYATILVLAIYVPGS 200

[Close]
BLAST of CmoCh04G009290 vs. TAIR 10
Match: AT5G10480.3 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 238.4 bits (607), Expect = 9.5e-63
Identity = 126/209 (60.29%), Postives = 151/209 (72.25%), Query Frame = 0 

Query: 1   MAGFLATIRRLYLSIYNWTLFVGWVQVFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVL 60
           MAGFL+ +RR+YL++YNW +F GW QV Y ++  LKE+G++ VY+A+E+PLQ AQTAAVL
Sbjct: 1   MAGFLSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKETGYENVYDAIEKPLQLAQTAAVL 60

Query: 61  EILHGLVGLVRSPVTATLPQI--------GIMYLFP-------------PWSSAGLSQR- 120
           EILHGLVGLVRSPV+ATLPQI        GI+Y FP              WS        
Sbjct: 61  EILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEFPITT 120

Query: 121 ---QIIRYSFYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKY 180
              +IIRYSF+G KEA GFAPS  LWLRYS+FLLLY TGITSEVGL+YLALP++K S  Y
Sbjct: 121 WIVEIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGITSEVGLIYLALPHIKTSEMY 180

Query: 181 SFRMPNKWNFSFDYLYGAMLILAIYVPGS 185
           S RMPN  NFSFD+ Y  +L+LAIYVPGS
Sbjct: 181 SVRMPNILNFSFDFFYATILVLAIYVPGS 209

[Close]
BLAST of CmoCh04G009290 vs. TAIR 10
Match: AT5G10480.2 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 204.1 bits (518), Expect = 2.0e-52
Identity = 111/174 (63.79%), Postives = 130/174 (74.71%), Query Frame = 0 

Query: 27  VFYFSVKQLKESGHQQVYNAVERPLQFAQTAAVLEILHGLVGLVRSPVTATLPQI----- 86
           V Y ++  LKE+G++ VY+A+E+PLQ AQTAAVLEILHGLVGLVRSPV+ATLPQI     
Sbjct: 2   VLYLAITTLKETGYENVYDAIEKPLQLAQTAAVLEILHGLVGLVRSPVSATLPQIGSRLF 61

Query: 87  ---GIMYLFPPWSSAGL--------SQRQIIRYSFYGMKEAFGFAPSLLLWLRYSTFLLL 146
              GI+Y FP   S  L        S  +IIRYSF+G KEA GFAPS  LWLRYS+FLLL
Sbjct: 62  LTWGILYSFPEVRSHFLVTSLVISWSITEIIRYSFFGFKEALGFAPSWHLWLRYSSFLLL 121

Query: 147 YVTGITSEVGLVYLALPYMKESGKYSFRMPNKWNFSFDYLYGAMLILAIYVPGS 185
           Y TGITSEVGL+YLALP++K S  YS RMPN  NFSFD+ Y  +L+LAIYVPGS
Sbjct: 122 YPTGITSEVGLIYLALPHIKTSEMYSVRMPNILNFSFDFFYATILVLAIYVPGS 175

[Close]
BLAST of CmoCh04G009290 vs. TAIR 10
Match: AT5G59770.1 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 63.2 bits (152), Expect = 5.5e-10
Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 0 

Query: 55  QTAAVLEILHGLVGLVRSPVTATLPQIGIMYLF-------------PPWSSAGLSQ---R 114
           QTAA+LE+LHG +G+V S   + L Q      F              PW S  L      
Sbjct: 103 QTAAILEVLHGAIGIVPSGFLSPLMQWSGRTHFILAIVGQIKEVQDSPWLSITLVAWCIG 162

Query: 115 QIIRYSFYGMKEAFGFAPSLLLWLRYSTFLLLYVTGITSEVGLVYLALPYMKESGKYSFR 174
           ++IRY  Y      G  P  L +LRY+ F+++Y TG+  E+ ++Y ALPY+KE   Y+  
Sbjct: 163 EMIRYPHYAF-TCLGRCPYWLTYLRYTGFIVIYPTGLVGELLIMYKALPYVKERNLYA-N 222

Query: 175 MPNKWNFS-FDYLYGAMLI 177
             + + FS +D+L+  +L+
Sbjct: 223 FFSVFPFSYYDFLWAVLLV 239

[Close]
BLAST of CmoCh04G009290 vs. TAIR 10
Match: AT2G37435.1 (Cystatin/monellin superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 7.1e-10
Identity = 49/150 (32.67%), Postives = 77/150 (51.33%), Query Frame = 0 

Query: 239 EEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFDKVFSCSF-IIPIDMH 298
           E+EE +I +++E+Y      +  KE       VE+S+GFD+ DF K F C F   P+D+ 
Sbjct: 37  EDEEPKISAEEEYY------LMVKE-------VEDSKGFDI-DFAK-FRCVFNYRPVDLD 96

Query: 299 ENSWMLKEVRIS------ANKAIKHYNKENGTNFEVVEIVKANHSGCCGSMYYITFNVKP 358
           +N   L+             K+++H+N+ + T +E V  +KANH    G MY+ITF  K 
Sbjct: 97  DNELALEPETTREFMDRLCRKSLEHFNEIHSTKYEFVRFIKANHHVSAGMMYFITFEGKL 156

Query: 359 IGTSAEFPPITFQAKVYYVIPIKDIIDVKL 382
           +    +     FQAK+ Y     +II  +L
Sbjct: 157 LSNDDDSK--QFQAKLCYCGGTPEIISCEL 169

The following BLAST results are available for this feature:
BLAST of CmoCh04G009290 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q7XSZ46.2e-6767.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A OS=Oryza sativa... [more]
Q5ZEJ02.6e-6565.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2B OS=Oryza sativa... [more]
Q8VZB24.1e-6363.50Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 OS=Arabidopsis t... [more]
Q9D3B16.5e-2435.98Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Mus musculus OX=10090 GN... [more]
Q2KIP81.1e-2335.45Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Bos taurus OX=9913 GN=HA... [more]
BLAST of CmoCh04G009290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FVU01.9e-90100.00uncharacterized protein LOC111447329 OS=Cucurbita moschata OX=3662 GN=LOC1114473... [more]
A0A6J1FQM58.9e-8586.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita moschata OX=3662... [more]
A0A6J1FPD68.9e-8595.21UPF0725 protein At4g29550-like OS=Cucurbita moschata OX=3662 GN=LOC111447608 PE=... [more]
A0A6J1IKY72.6e-8485.50Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1FX622.6e-8485.50Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita moschata OX=3662... [more]
BLAST of CmoCh04G009290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022942205.13.8e-90100.00uncharacterized protein LOC111447329 [Cucurbita moschata][more]
KAG6600692.11.8e-8486.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2, partial [Cucurb... [more]
XP_022942204.11.8e-8486.00very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A-like isoform X2... [more]
XP_022942626.11.8e-8495.21UPF0725 protein At4g29550-like [Cucurbita moschata][more]
XP_022942935.15.4e-8485.50very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A-like isoform X2... [more]
BLAST of CmoCh04G009290 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G10480.12.9e-6463.50Protein-tyrosine phosphatase-like, PTPLA [more]
AT5G10480.39.5e-6360.29Protein-tyrosine phosphatase-like, PTPLA [more]
AT5G10480.22.0e-5263.79Protein-tyrosine phosphatase-like, PTPLA [more]
AT5G59770.15.5e-1033.81Protein-tyrosine phosphatase-like, PTPLA [more]
AT2G37435.17.1e-1032.67Cystatin/monellin superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007482Protein-tyrosine phosphatase-like, PTPLAPFAMPF04387PTPLAcoord: 55..185
e-value: 4.4E-28
score: 98.0
IPR007482Protein-tyrosine phosphatase-like, PTPLAPANTHERPTHR11035PTPLA DOMAIN PROTEINcoord: 1..185
IPR000010Cystatin domainPFAMPF00031Cystatincoord: 304..350
e-value: 9.1E-7
score: 29.1
IPR000010Cystatin domainCDDcd00042CYcoord: 304..364
e-value: 7.70103E-7
score: 45.1576
NoneNo IPR availableGENE3D3.10.450.10coord: 302..377
e-value: 7.4E-9
score: 37.7
NoneNo IPR availablePANTHERPTHR11035:SF39VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASEcoord: 1..185
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 306..373
IPR006525Cystatin-related, plantTIGRFAMTIGR01638TIGR01638coord: 310..384
e-value: 5.8E-10
score: 37.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G009290.1CmoCh04G009290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030497 fatty acid elongation
biological_process GO:0010951 negative regulation of endopeptidase activity
biological_process GO:0030148 sphingolipid biosynthetic process
biological_process GO:0042761 very long-chain fatty acid biosynthetic process
cellular_component GO:0030176 integral component of endoplasmic reticulum membrane
molecular_function GO:0018812 3-hydroxyacyl-CoA dehydratase activity
molecular_function GO:0102343 3-hydroxy-arachidoyl-CoA dehydratase activity
molecular_function GO:0102344 3-hydroxy-behenoyl-CoA dehydratase activity
molecular_function GO:0102345 3-hydroxy-lignoceroyl-CoA dehydratase activity
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
molecular_function GO:0102158 very-long-chain 3-hydroxyacyl-CoA dehydratase activity