CmoCh04G009100 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G009100
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptioncytochrome c oxidase subunit 6a, mitochondrial-like
LocationCmo_Chr04: 4577915 .. 4580271 (+)
RNA-Seq ExpressionCmoCh04G009100
SyntenyCmoCh04G009100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCACGTGCCGAGATCACACGTTTGGGTAGTTTTGGTGAAAGGGCTCTCGATCGAGATTGCAAGGGTACGGTCATTTCAATTATAACTCGGGCATCGGCGATTTGTTAGAGAAAGAGAGAGTCAAAAGAGAATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCTGCCTTCCGCGGTGCCTCTCGGAACTCCGCTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGATGCTCGTAAGTCTCTCTCTCGGTATTTCTGGATATGTTTTTTTCTTTATGGACGGAAATTTTCTTGTTACTTTTGGCAACTTCGTTTAGCCCATTCATTTTCCTGGCCTATTTTTATGATGAAATTGGGGAAACTAGGATGATGTTAATTATTGAATCGTGTTCAGAAATTTGGACCAAGATAATTTGGTCGGGCGCTCTTTGTTCCTTTTAGATTGCAAGTCTTGCAAGGGGAGGTTTTTTTTTTCCTTCAATTTTAAATTCAGATTTAAATGTTAAATCATAGTATGGGATGGGAGTATATACATGACATATTTGACAATTAACTTTAGATAGGGTTTCCAGTCGCTAAAGGAGTAGTTTTGATTTAAAGTTCGTGGTAAGGAAAAAGACAAGAGGGGCAAAAGCTTCCTGTTCCATTACTGAGTGGCAACAATATCATTCTTGATTTCTGTAATTACATAAAAATGCTTTCTAAAGTCTTAGATGTGGCTTGTGGTAGGTTCAGTTTCCTTTTGATTTCACATAAATACGACATGAAGGAAAGGGAATATGCAGTAAGTTTATTAGACGGTTTAGGGCTTTAGTTAAAAAAAATTCTTCTCTGGGAAGTTTATACACCTCTAATCCTACGCCTGCCTCTTATTTCTTTATTTCCCCCATTTTTTCTTTCTTTCTTTTCCCCCACACAATTCTGGGTTGCGAGTAAGGGGACGAATATTATTCTGTGTTTTGAGGTGATTTCAGTAAATTGTTGGAGCTAAACCAATCTGTGCTGTGAATTTATTTTATATTGTTCCACCATAACATATACTTGATGGTGGCCTTTACTTAGTTGGGTACAAATTATGTATTGTTATTTTTAAATACTATTTCAGACTTATAGTGTACAAACAAGTGGGAGAGAAAAATTTTATGCAGGAGCGCAATGATGCTTGTACTGCCTATGCTTTATCTCTCATACAACCCTTCTTTCTTTATTTCAGTTGAAACGGCAAAATGGGAGAAGATTACTTATGCAGGCATTGCAGCCTGCACCACTTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGTGAGCTACAACTTTAGTCAATTTATAATTTTCCTACCACTTCTCAGTATCCTAGTTGCATTATTCATTGTACTCTCATGTGTGGCCAATTCATTTTTGTTTGGGTTTTCATTGTATGCAGGCATACCCATATTTGCACATACGCAATAAGGAGTTCCCATGGGGTAAGTTTCCATTGCATTACAAGTTCTATGACATCTTTTTTATCTCTTGGCAGTCGCAATTTGGGTTTTGATGAGGTAACTAGAACTGGATGCTGCAGTGATATCATGTAGTATATATTTACTGGACGCCAAGCAAACTTACAGCTATCTTGTAACTAATATATTTACTGCTAATTTGGCAGCTAGCAACTAATATGCTCATAAATACCTCGTTCAGCTTGCTAACAGTTTTTAGTCCTATTATAACCTTGTCCTTTCATTAACCCAACTCTCACTACTTTTAAATGCTCCATGGTCAAAATTTCTAATGGTAGTTCGACAGCTTCCTCTTTCTGTTGGTCGATCATCTCAAGGGGTCTATGGATACTTATGGGATAAAAGTGTTTGTAAGCTGTTTCCAAGAAGTAAACATTTTAGAATAAAAGTTATATGTTTTTGTAACTGTTTTCGACAGTTGCTTCACTCAGTATATTTTAGAAGAACTGCAGTTGAAATGTTAAAATCTTTACAAACGAAAAAGTCATAGCATCATCGTAGGAAAAAGAGCTGGAGATGATGTACCACGGCATTTGTCAGAACTGGTTGAATTTGATCAATGATCTTATATTCGTTCATCTTTACTCTCTGCTCGTTGCTCATTTGCTCCTTTTCTGTTTATTATTTATTGTGAAAATAATATTGTTTTATTTTCAATCCCTTTTGCATCAGGTCCCGATGGTCTCTTTGAGGTGAAACATCACTGAGGACTATTTTGGTTCAAGGGGACATCGAGCATGGTAATTCTACTTCTCATTTGGTTCATATCAGAAAGACTTCGTTGACCCGTTTGGTTGGATTTTTCTTTTTAATGATGCGTGGGCCAT

mRNA sequence

CGCACGTGCCGAGATCACACGTTTGGGTAGTTTTGGTGAAAGGGCTCTCGATCGAGATTGCAAGGGTACGGTCATTTCAATTATAACTCGGGCATCGGCGATTTGTTAGAGAAAGAGAGAGTCAAAAGAGAATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCTGCCTTCCGCGGTGCCTCTCGGAACTCCGCTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGATGCTCTTGAAACGGCAAAATGGGAGAAGATTACTTATGCAGGCATTGCAGCCTGCACCACTTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGCATACCCATATTTGCACATACGCAATAAGGAGTTCCCATGGGGTCCCGATGGTCTCTTTGAGGTGAAACATCACTGAGGACTATTTTGGTTCAAGGGGACATCGAGCATGGTAATTCTACTTCTCATTTGGTTCATATCAGAAAGACTTCGTTGACCCGTTTGGTTGGATTTTTCTTTTTAATGATGCGTGGGCCAT

Coding sequence (CDS)

ATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCTGCCTTCCGCGGTGCCTCTCGGAACTCCGCTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGATGCTCTTGAAACGGCAAAATGGGAGAAGATTACTTATGCAGGCATTGCAGCCTGCACCACTTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGCATACCCATATTTGCACATACGCAATAAGGAGTTCCCATGGGGTCCCGATGGTCTCTTTGAGGTGAAACATCACTGA

Protein sequence

MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Homology
[Close]
BLAST of CmoCh04G009100 vs. ExPASy Swiss-Prot
Match: Q9T070 (Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX6A PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.9e-33
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDALETAKWEKITYAGIAACTTLAF 60
          MA A +RS L RA  R A + S  PKR F+SSA HDDA E AKWEKITY GIA+CT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Sbjct: 61 YVLSKGHHHGEDPPAYPHMHIRNKEFPWGPDGLFEVKHN 99

[Close]
BLAST of CmoCh04G009100 vs. ExPASy TrEMBL
Match: A0A6J1FPI8 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111447063 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.2e-50
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmoCh04G009100 vs. ExPASy TrEMBL
Match: A0A6J1KMD3 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495450 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.6e-49
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAA RGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmoCh04G009100 vs. ExPASy TrEMBL
Match: A0A6J1ERW3 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111435960 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.2e-46
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDA ETAKWEKITYAGI +C+ LAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmoCh04G009100 vs. ExPASy TrEMBL
Match: A0A6J1C3V4 (cytochrome c oxidase subunit 6a, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008246 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.1e-46
Identity = 92/98 (93.88%), Postives = 93/98 (94.90%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAAFRGAS+NSAQPKRGFASSAHDD  ETAKWEKITYAGI ACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASQNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFE K H
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFETKEH 98

[Close]
BLAST of CmoCh04G009100 vs. ExPASy TrEMBL
Match: A0A6J1J8L1 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111482732 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45
Identity = 90/98 (91.84%), Postives = 93/98 (94.90%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMA IRSNLLRAAFRGASRN AQPKRGFASSAHDDA ETAKWEKITYAGI +C+ LAFY
Sbjct: 1  MAMAMIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmoCh04G009100 vs. NCBI nr
Match: XP_022941809.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG6600678.1 Cytochrome c oxidase subunit 6a, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031316.1 Cytochrome c oxidase subunit 6a, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.5 bits (524), Expect = 1.1e-49
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmoCh04G009100 vs. NCBI nr
Match: XP_023001309.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 204.1 bits (518), Expect = 5.4e-49
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAA RGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmoCh04G009100 vs. NCBI nr
Match: XP_023545456.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.1 bits (518), Expect = 5.4e-49
Identity = 96/98 (97.96%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          M+MATIRSNLLRAAFRGASRNSAQPKRGF+SSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmoCh04G009100 vs. NCBI nr
Match: XP_038905594.1 (cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida])

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46
Identity = 93/98 (94.90%), Postives = 94/98 (95.92%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMA+IRSNLLRAA RGASRNSAQPKRGFASSAHDDA ETAKWEKITYAGIA CT LAFY
Sbjct: 1  MAMASIRSNLLRAAVRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmoCh04G009100 vs. NCBI nr
Match: XP_022929363.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG6577328.1 Cytochrome c oxidase subunit 6a, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195.3 bits (495), Expect = 2.5e-46
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDA ETAKWEKITYAGI +C+ LAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of CmoCh04G009100 vs. TAIR 10
Match: AT4G37830.1 (cytochrome c oxidase-related )

HSP 1 Score: 142.9 bits (359), Expect = 1.4e-34
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDALETAKWEKITYAGIAACTTLAF 60
          MA A +RS L RA  R A + S  PKR F+SSA HDDA E AKWEKITY GIA+CT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Sbjct: 61 YVLSKGHHHGEDPPAYPHMHIRNKEFPWGPDGLFEVKHN 99

[Close]
BLAST of CmoCh04G009100 vs. TAIR 10
Match: AT4G37830.2 (cytochrome c oxidase-related )

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-26
Identity = 62/99 (62.63%), Postives = 68/99 (68.69%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDALETAKWEKITYAGIAACTTLAF 60
          MA A +RS L RA  R A + S  PKR F+SSA HDDA E AKWEKITY GIA+CT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          Y LSKGH H E+PP          EFPWGPDGLFEVKH+
Sbjct: 61 YVLSKGHHHGEDPP----------EFPWGPDGLFEVKHN 89

The following BLAST results are available for this feature:
BLAST of CmoCh04G009100 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9T0701.9e-3370.71Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana OX=3702 G... [more]
BLAST of CmoCh04G009100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FPI85.2e-50100.00cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=366... [more]
A0A6J1KMD32.6e-4998.98cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1ERW31.2e-4693.88cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=366... [more]
A0A6J1C3V42.1e-4693.88cytochrome c oxidase subunit 6a, mitochondrial OS=Momordica charantia OX=3673 GN... [more]
A0A6J1J8L12.3e-4591.84cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 ... [more]
BLAST of CmoCh04G009100 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022941809.11.1e-49100.00cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG660... [more]
XP_023001309.15.4e-4998.98cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima][more]
XP_023545456.15.4e-4997.96cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo][more]
XP_038905594.11.5e-4694.90cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida][more]
XP_022929363.12.5e-4693.88cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG657... [more]
BLAST of CmoCh04G009100 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G37830.11.4e-3470.71cytochrome c oxidase-related [more]
AT4G37830.22.3e-2662.63cytochrome c oxidase-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036418Cytochrome c oxidase, subunit VIa superfamilyGENE3D4.10.95.10Cytochrome c oxidase, subunit VIacoord: 29..98
e-value: 6.9E-14
score: 53.5
IPR036418Cytochrome c oxidase, subunit VIa superfamilySUPERFAMILY81411Mitochondrial cytochrome c oxidase subunit VIacoord: 30..97
IPR001349Cytochrome c oxidase, subunit VIaPIRSFPIRSF000277COX_VIacoord: 1..98
e-value: 2.2E-22
score: 77.3
IPR001349Cytochrome c oxidase, subunit VIaPFAMPF02046COX6Acoord: 38..88
e-value: 2.0E-5
score: 25.0
IPR001349Cytochrome c oxidase, subunit VIaPANTHERPTHR11504CYTOCHROME C OXIDASE POLYPEPTIDE VIAcoord: 1..98
NoneNo IPR availablePANTHERPTHR11504:SF6CYTOCHROME C OXIDASE SUBUNIT 6A1-RELATEDcoord: 1..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G009100.1CmoCh04G009100.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0050790 regulation of catalytic activity
cellular_component GO:0005751 mitochondrial respiratory chain complex IV
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0030234 enzyme regulator activity