CmoCh04G009010 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCAGTCCACCATCGCCGGCTGGCTGAACAATTACAACAACCTCAAATCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCCTGCGTTGACCTAATTCGGAATTGCGATCTTCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGCTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGCTGTGGGAGTCGGCATTCTCTTGGGCTATACTGCTTGA ATGAAGCAGTCCACCATCGCCGGCTGGCTGAACAATTACAACAACCTCAAATCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCCTGCGTTGACCTAATTCGGAATTGCGATCTTCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGCTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGCTGTGGGAGTCGGCATTCTCTTGGGCTATACTGCTTGA ATGAAGCAGTCCACCATCGCCGGCTGGCTGAACAATTACAACAACCTCAAATCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCCTGCGTTGACCTAATTCGGAATTGCGATCTTCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGCTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGCTGTGGGAGTCGGCATTCTCTTGGGCTATACTGCTTGA MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNRGVKWVWALAICLSAVGVGILLGYTA Homology
BLAST of CmoCh04G009010 vs. ExPASy TrEMBL
Match: A0A6J1FTQ9 (uncharacterized protein LOC111448032 OS=Cucurbita moschata OX=3662 GN=LOC111448032 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 2.6e-92 Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0
BLAST of CmoCh04G009010 vs. ExPASy TrEMBL
Match: A0A6J1HY55 (uncharacterized protein LOC111469054 OS=Cucurbita maxima OX=3661 GN=LOC111469054 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 7.5e-87 Identity = 171/177 (96.61%), Postives = 171/177 (96.61%), Query Frame = 0
BLAST of CmoCh04G009010 vs. ExPASy TrEMBL
Match: A0A6J1C873 (uncharacterized protein LOC111008325 OS=Momordica charantia OX=3673 GN=LOC111008325 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.5e-50 Identity = 115/174 (66.09%), Postives = 131/174 (75.29%), Query Frame = 0
BLAST of CmoCh04G009010 vs. ExPASy TrEMBL
Match: A0A5D3BEN7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00050 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 5.4e-45 Identity = 108/169 (63.91%), Postives = 123/169 (72.78%), Query Frame = 0
BLAST of CmoCh04G009010 vs. ExPASy TrEMBL
Match: A0A1S3C2P7 (uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 5.4e-45 Identity = 108/169 (63.91%), Postives = 123/169 (72.78%), Query Frame = 0
BLAST of CmoCh04G009010 vs. NCBI nr
Match: XP_022943244.1 (uncharacterized protein LOC111448032 [Cucurbita moschata]) HSP 1 Score: 347.8 bits (891), Expect = 5.5e-92 Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0
BLAST of CmoCh04G009010 vs. NCBI nr
Match: KAG7031309.1 (hypothetical protein SDJN02_05349, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 339.3 bits (869), Expect = 1.9e-89 Identity = 173/177 (97.74%), Postives = 173/177 (97.74%), Query Frame = 0
BLAST of CmoCh04G009010 vs. NCBI nr
Match: KAG6600670.1 (hypothetical protein SDJN03_05903, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87 Identity = 173/181 (95.58%), Postives = 173/181 (95.58%), Query Frame = 0
BLAST of CmoCh04G009010 vs. NCBI nr
Match: XP_022970087.1 (uncharacterized protein LOC111469054 [Cucurbita maxima]) HSP 1 Score: 329.7 bits (844), Expect = 1.5e-86 Identity = 171/177 (96.61%), Postives = 171/177 (96.61%), Query Frame = 0
BLAST of CmoCh04G009010 vs. NCBI nr
Match: XP_023545135.1 (uncharacterized protein LOC111804522 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 260.8 bits (665), Expect = 8.8e-66 Identity = 134/136 (98.53%), Postives = 134/136 (98.53%), Query Frame = 0
BLAST of CmoCh04G009010 vs. TAIR 10
Match: AT1G01240.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 69.3 bits (168), Expect = 3.5e-12 Identity = 63/202 (31.19%), Postives = 89/202 (44.06%), Query Frame = 0
BLAST of CmoCh04G009010 vs. TAIR 10
Match: AT1G01240.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 69.3 bits (168), Expect = 3.5e-12 Identity = 63/202 (31.19%), Postives = 89/202 (44.06%), Query Frame = 0
BLAST of CmoCh04G009010 vs. TAIR 10
Match: AT1G01240.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 69.3 bits (168), Expect = 3.5e-12 Identity = 63/202 (31.19%), Postives = 89/202 (44.06%), Query Frame = 0
BLAST of CmoCh04G009010 vs. TAIR 10
Match: AT2G46550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 1.9e-10 Identity = 56/200 (28.00%), Postives = 89/200 (44.50%), Query Frame = 0
BLAST of CmoCh04G009010 vs. TAIR 10
Match: AT2G46550.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3). ) HSP 1 Score: 63.5 bits (153), Expect = 1.9e-10 Identity = 56/200 (28.00%), Postives = 89/200 (44.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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