CmoCh04G009010 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G009010
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr04: 4540135 .. 4540671 (+)
RNA-Seq ExpressionCmoCh04G009010
SyntenyCmoCh04G009010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCAGTCCACCATCGCCGGCTGGCTGAACAATTACAACAACCTCAAATCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCCTGCGTTGACCTAATTCGGAATTGCGATCTTCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGCTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGCTGTGGGAGTCGGCATTCTCTTGGGCTATACTGCTTGA

mRNA sequence

ATGAAGCAGTCCACCATCGCCGGCTGGCTGAACAATTACAACAACCTCAAATCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCCTGCGTTGACCTAATTCGGAATTGCGATCTTCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGCTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGCTGTGGGAGTCGGCATTCTCTTGGGCTATACTGCTTGA

Coding sequence (CDS)

ATGAAGCAGTCCACCATCGCCGGCTGGCTGAACAATTACAACAACCTCAAATCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCCTGCGTTGACCTAATTCGGAATTGCGATCTTCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGCTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGCTGTGGGAGTCGGCATTCTCTTGGGCTATACTGCTTGA

Protein sequence

MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNRGVKWVWALAICLSAVGVGILLGYTA
Homology
BLAST of CmoCh04G009010 vs. ExPASy TrEMBL
Match: A0A6J1FTQ9 (uncharacterized protein LOC111448032 OS=Cucurbita moschata OX=3662 GN=LOC111448032 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.6e-92
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0

Query: 1   MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGA
Sbjct: 1   MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGA 60

Query: 61  MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 61  MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120

Query: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNRGVKWVWALAICLSAVGVGILLGYT 178
           IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNRGVKWVWALAICLS VGVGILLGYT
Sbjct: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNRGVKWVWALAICLSVVGVGILLGYT 177

BLAST of CmoCh04G009010 vs. ExPASy TrEMBL
Match: A0A6J1HY55 (uncharacterized protein LOC111469054 OS=Cucurbita maxima OX=3661 GN=LOC111469054 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.5e-87
Identity = 171/177 (96.61%), Postives = 171/177 (96.61%), Query Frame = 0

Query: 1   MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIA WLNNYNNLKSNPEALDSTDMLLEFPYKP VDLIRNCDLPPPQKLFTASDKGA
Sbjct: 43  MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 102

Query: 61  MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MAARGRGREEVE GGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 103 MAARGRGREEVEAGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 162

Query: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGN-RGVKWVWALAICLSAVGVGILLGY 177
           IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGN  GVKWVWALAICLS VGVGILLGY
Sbjct: 163 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGGGVKWVWALAICLSVVGVGILLGY 219

BLAST of CmoCh04G009010 vs. ExPASy TrEMBL
Match: A0A6J1C873 (uncharacterized protein LOC111008325 OS=Momordica charantia OX=3673 GN=LOC111008325 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.5e-50
Identity = 115/174 (66.09%), Postives = 131/174 (75.29%), Query Frame = 0

Query: 19  NPEALDSTDML---LEFPYKPCVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVETGG 78
           NP+A+DS DML   LEF +KP VDLIRNCDLPPPQK+FT    G    + R R+E E+GG
Sbjct: 2   NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGG 61

Query: 79  MEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRV 138
           +EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIF YRQS+KL++LR+
Sbjct: 62  VEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRL 121

Query: 139 SKLKKRKEEEED------------NGNGNRGVKWVWALAICLSAVGVGILLGYT 178
           S L+K  +EEE              G G   +KWVWALAIC + VGVG L GYT
Sbjct: 122 SNLQKMHDEEESRRNGDSDAPAAGGGGGGEAMKWVWALAICFTVVGVGFLYGYT 171

BLAST of CmoCh04G009010 vs. ExPASy TrEMBL
Match: A0A5D3BEN7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00050 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 5.4e-45
Identity = 108/169 (63.91%), Postives = 123/169 (72.78%), Query Frame = 0

Query: 18  SNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVETGGME 77
           +N ++LDS DM+     +  V+LIRNCDLPPPQK+F +                   GME
Sbjct: 7   NNRQSLDSRDMV----QRDGVELIRNCDLPPPQKVFKS-------------------GME 66

Query: 78  EKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRVSK 137
           EK+ELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL+FCYRQSLKL+ELRV K
Sbjct: 67  EKIELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLELRVCK 126

Query: 138 LKKR---------KEEEEDNGNGNRGVKWVWALAICLSAVGVGILLGYT 178
           L+K+         +EEE D   GN G+KWVWALAICLS VGVG LLGYT
Sbjct: 127 LQKQEVEEVEEEEEEEERDENGGNGGMKWVWALAICLSVVGVGFLLGYT 152

BLAST of CmoCh04G009010 vs. ExPASy TrEMBL
Match: A0A1S3C2P7 (uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 5.4e-45
Identity = 108/169 (63.91%), Postives = 123/169 (72.78%), Query Frame = 0

Query: 18  SNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVETGGME 77
           +N ++LDS DM+     +  V+LIRNCDLPPPQK+F +                   GME
Sbjct: 7   NNRQSLDSRDMV----QRDGVELIRNCDLPPPQKVFKS-------------------GME 66

Query: 78  EKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRVSK 137
           EK+ELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL+FCYRQSLKL+ELRV K
Sbjct: 67  EKIELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLELRVCK 126

Query: 138 LKKR---------KEEEEDNGNGNRGVKWVWALAICLSAVGVGILLGYT 178
           L+K+         +EEE D   GN G+KWVWALAICLS VGVG LLGYT
Sbjct: 127 LQKQEVEEVEEEEEEEERDENGGNGGMKWVWALAICLSVVGVGFLLGYT 152

BLAST of CmoCh04G009010 vs. NCBI nr
Match: XP_022943244.1 (uncharacterized protein LOC111448032 [Cucurbita moschata])

HSP 1 Score: 347.8 bits (891), Expect = 5.5e-92
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0

Query: 1   MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGA
Sbjct: 1   MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGA 60

Query: 61  MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 61  MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120

Query: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNRGVKWVWALAICLSAVGVGILLGYT 178
           IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNRGVKWVWALAICLS VGVGILLGYT
Sbjct: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNRGVKWVWALAICLSVVGVGILLGYT 177

BLAST of CmoCh04G009010 vs. NCBI nr
Match: KAG7031309.1 (hypothetical protein SDJN02_05349, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 339.3 bits (869), Expect = 1.9e-89
Identity = 173/177 (97.74%), Postives = 173/177 (97.74%), Query Frame = 0

Query: 1   MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIA WLNNYNNLKSNPEALDSTDMLLEFPYKP VDLIRNCDLPPPQKLFTASDKGA
Sbjct: 1   MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 60

Query: 61  MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MA RGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 61  MAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120

Query: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNRGVKWVWALAICLSAVGVGILLGYT 178
           IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNRGVKWVWALAICLS VGVGILLGYT
Sbjct: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNRGVKWVWALAICLSVVGVGILLGYT 177

BLAST of CmoCh04G009010 vs. NCBI nr
Match: KAG6600670.1 (hypothetical protein SDJN03_05903, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87
Identity = 173/181 (95.58%), Postives = 173/181 (95.58%), Query Frame = 0

Query: 1   MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIA WLNNYNNLKSNPEALDSTDMLLEFPYKP VDLIRNCDLPPPQKLFTASDKGA
Sbjct: 1   MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 60

Query: 61  MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MA RGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 61  MAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120

Query: 121 IFCYRQSLKLMELRVSKLKKRKEEEED----NGNGNRGVKWVWALAICLSAVGVGILLGY 178
           IFCYRQSLKLMELRVSKLKKRKEEEED    NGNGNRGVKWVWALAICLS VGVGILLGY
Sbjct: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGNGNRGVKWVWALAICLSVVGVGILLGY 180

BLAST of CmoCh04G009010 vs. NCBI nr
Match: XP_022970087.1 (uncharacterized protein LOC111469054 [Cucurbita maxima])

HSP 1 Score: 329.7 bits (844), Expect = 1.5e-86
Identity = 171/177 (96.61%), Postives = 171/177 (96.61%), Query Frame = 0

Query: 1   MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIA WLNNYNNLKSNPEALDSTDMLLEFPYKP VDLIRNCDLPPPQKLFTASDKGA
Sbjct: 43  MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 102

Query: 61  MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MAARGRGREEVE GGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 103 MAARGRGREEVEAGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 162

Query: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGN-RGVKWVWALAICLSAVGVGILLGY 177
           IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGN  GVKWVWALAICLS VGVGILLGY
Sbjct: 163 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGGGVKWVWALAICLSVVGVGILLGY 219

BLAST of CmoCh04G009010 vs. NCBI nr
Match: XP_023545135.1 (uncharacterized protein LOC111804522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.8 bits (665), Expect = 8.8e-66
Identity = 134/136 (98.53%), Postives = 134/136 (98.53%), Query Frame = 0

Query: 1   MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIA WLNNYNNLKSNPEALDSTDMLLEFPYKP VDLIRNCDLPPPQKLFTASDKGA
Sbjct: 1   MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 60

Query: 61  MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 61  MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120

Query: 121 IFCYRQSLKLMELRVS 137
           IFCYRQSLKLMELRVS
Sbjct: 121 IFCYRQSLKLMELRVS 136

BLAST of CmoCh04G009010 vs. TAIR 10
Match: AT1G01240.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 3.5e-12
Identity = 63/202 (31.19%), Postives = 89/202 (44.06%), Query Frame = 0

Query: 24  DSTDMLLEFPYKPCVDLIRNCDLPPPQKLF-----TASDKGAMAA----------RGRGR 83
           D  ++ L    K     I+NCDLPPPQKL      ++ +KG   A          + R  
Sbjct: 124 DKDELALMVATKSVDHNIQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFE 183

Query: 84  EEVETGGMEE----------------KLELLKALRLSQTRAREAERKAAKLMEERDCISR 143
             +   G  E                K +LL+ALR SQTRAREAER A +   E+D +  
Sbjct: 184 RSLSYNGSTESKNTSPMSSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVIT 243

Query: 144 AFEDEARLIFCYRQSLKLMELRV-----------------SKLKKRKEEEEDNGNGNRGV 178
               +A  +  Y+Q LKL+E+                     LKKRK+  E    G  G 
Sbjct: 244 ILLKQASQMLAYKQWLKLLEMEALYLQMKKEEEQEEQVKGMNLKKRKQRGEKKKKGETG- 303

BLAST of CmoCh04G009010 vs. TAIR 10
Match: AT1G01240.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 3.5e-12
Identity = 63/202 (31.19%), Postives = 89/202 (44.06%), Query Frame = 0

Query: 24  DSTDMLLEFPYKPCVDLIRNCDLPPPQKLF-----TASDKGAMAA----------RGRGR 83
           D  ++ L    K     I+NCDLPPPQKL      ++ +KG   A          + R  
Sbjct: 124 DKDELALMVATKSVDHNIQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFE 183

Query: 84  EEVETGGMEE----------------KLELLKALRLSQTRAREAERKAAKLMEERDCISR 143
             +   G  E                K +LL+ALR SQTRAREAER A +   E+D +  
Sbjct: 184 RSLSYNGSTESKNTSPMSSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVIT 243

Query: 144 AFEDEARLIFCYRQSLKLMELRV-----------------SKLKKRKEEEEDNGNGNRGV 178
               +A  +  Y+Q LKL+E+                     LKKRK+  E    G  G 
Sbjct: 244 ILLKQASQMLAYKQWLKLLEMEALYLQMKKEEEQEEQVKGMNLKKRKQRGEKKKKGETG- 303

BLAST of CmoCh04G009010 vs. TAIR 10
Match: AT1G01240.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 3.5e-12
Identity = 63/202 (31.19%), Postives = 89/202 (44.06%), Query Frame = 0

Query: 24  DSTDMLLEFPYKPCVDLIRNCDLPPPQKLF-----TASDKGAMAA----------RGRGR 83
           D  ++ L    K     I+NCDLPPPQKL      ++ +KG   A          + R  
Sbjct: 124 DKDELALMVATKSVDHNIQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFE 183

Query: 84  EEVETGGMEE----------------KLELLKALRLSQTRAREAERKAAKLMEERDCISR 143
             +   G  E                K +LL+ALR SQTRAREAER A +   E+D +  
Sbjct: 184 RSLSYNGSTESKNTSPMSSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVIT 243

Query: 144 AFEDEARLIFCYRQSLKLMELRV-----------------SKLKKRKEEEEDNGNGNRGV 178
               +A  +  Y+Q LKL+E+                     LKKRK+  E    G  G 
Sbjct: 244 ILLKQASQMLAYKQWLKLLEMEALYLQMKKEEEQEEQVKGMNLKKRKQRGEKKKKGETG- 303

BLAST of CmoCh04G009010 vs. TAIR 10
Match: AT2G46550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 1.9e-10
Identity = 56/200 (28.00%), Postives = 89/200 (44.50%), Query Frame = 0

Query: 27  DMLLEFPYKPCVDLIRNCDLPPPQKL---FTASDKG-------------------AMAAR 86
           D L     +  +D + NCDLP PQK+   +  S +G                   +  + 
Sbjct: 189 DELASLVAQRSLDYVENCDLPTPQKMKRSYYGSPRGFDSDGLRDYSVSGQTIKGTSKGSS 248

Query: 87  GRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCY 146
            + R E  +     K ELL+ALR SQTRAREAE  A +   E++ + +    +A  +F Y
Sbjct: 249 CKNRPEASSESDLSKSELLEALRRSQTRAREAENMAKEAYAEKEHLVKILLKQAAELFGY 308

Query: 147 RQSLKLMELRVSKLKKRKEEEEDNGNGNRGV---------------------------KW 178
           +Q L+L++L    L+ + +E ++  N + GV                           K+
Sbjct: 309 KQWLQLLQLEALYLQIKNKEIDNKNNDDPGVSIPCWSNGKARKEGRKRRSKRGKPNGAKY 368

BLAST of CmoCh04G009010 vs. TAIR 10
Match: AT2G46550.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3). )

HSP 1 Score: 63.5 bits (153), Expect = 1.9e-10
Identity = 56/200 (28.00%), Postives = 89/200 (44.50%), Query Frame = 0

Query: 27  DMLLEFPYKPCVDLIRNCDLPPPQKL---FTASDKG-------------------AMAAR 86
           D L     +  +D + NCDLP PQK+   +  S +G                   +  + 
Sbjct: 49  DELASLVAQRSLDYVENCDLPTPQKMKRSYYGSPRGFDSDGLRDYSVSGQTIKGTSKGSS 108

Query: 87  GRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCY 146
            + R E  +     K ELL+ALR SQTRAREAE  A +   E++ + +    +A  +F Y
Sbjct: 109 CKNRPEASSESDLSKSELLEALRRSQTRAREAENMAKEAYAEKEHLVKILLKQAAELFGY 168

Query: 147 RQSLKLMELRVSKLKKRKEEEEDNGNGNRGV---------------------------KW 178
           +Q L+L++L    L+ + +E ++  N + GV                           K+
Sbjct: 169 KQWLQLLQLEALYLQIKNKEIDNKNNDDPGVSIPCWSNGKARKEGRKRRSKRGKPNGAKY 228

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FTQ92.6e-9299.44uncharacterized protein LOC111448032 OS=Cucurbita moschata OX=3662 GN=LOC1114480... [more]
A0A6J1HY557.5e-8796.61uncharacterized protein LOC111469054 OS=Cucurbita maxima OX=3661 GN=LOC111469054... [more]
A0A6J1C8731.5e-5066.09uncharacterized protein LOC111008325 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A5D3BEN75.4e-4563.91Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C2P75.4e-4563.91uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=... [more]
Match NameE-valueIdentityDescription
XP_022943244.15.5e-9299.44uncharacterized protein LOC111448032 [Cucurbita moschata][more]
KAG7031309.11.9e-8997.74hypothetical protein SDJN02_05349, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6600670.11.1e-8795.58hypothetical protein SDJN03_05903, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022970087.11.5e-8696.61uncharacterized protein LOC111469054 [Cucurbita maxima][more]
XP_023545135.18.8e-6698.53uncharacterized protein LOC111804522 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT1G01240.13.5e-1231.19unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 1... [more]
AT1G01240.23.5e-1231.19unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G01240.33.5e-1231.19unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G46550.11.9e-1028.00unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G46550.21.9e-1028.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 128..148
NoneNo IPR availableCOILSCoilCoilcoord: 86..113
NoneNo IPR availablePANTHERPTHR33868EXPRESSED PROTEINcoord: 21..177
NoneNo IPR availablePANTHERPTHR33868:SF10OS08G0483100 PROTEINcoord: 21..177

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G009010.1CmoCh04G009010.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane