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CmoCh04G008780 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGCTCCATCAACGGCATTTTTGCCTCGTCCCGGCGATGAAAAAAAGAGGTAATGTAACTTGATTTCAGCCGTTAATTGTGTGGGTTGTTTGGACTTGACTACTATGTTCAGGGTTTGAAATTTTAAGGGCACATTGGCTATTTGGATTTAGGGGTTTATTGGAGAACTTCGTTCCGATTTAGGGTTTCACTGGAGAACTTCAGAGGTTAATCGAAGGATCGTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCTATTTTCGATACCTTTTGTATTTTTCGTGGTTTTGATTACGGAGGATTAGGGTGATTTTAGTAGGTTCATTGTTCCCATGGTAACGCGATTATTATCTTTGAACTCTTCGTTTCATTCCCTGTCGTCTTCTATCTCTTCTCTGTGCGGGGATCCGGGGACAAACCTGATATTCAAATTTATATGTTGGCAGAAGAGAGGAGGACGACGAACTCTTATATCATTGAGATTGGTTCCGATAACAGAGAGGGGAAGAACAAAGCAGTTGCTCATGATGGAGTGATTGCTCAGGAGAAAGAAAATCAGTTGGTCCTGTCATTGAGGCCGGTGGGATTTTCGCATCTGCTAAGAATACTGGTATGATTCCAAGCCCAAGGCTATGAAATTGAATTCAAGTTTTTGGGGTCGTAGGAAGTAATTGTTGTTTATAAGTTTATTTATTATTTATTATTTATTATTATTTGTTGGCTGTGAAGATGTGAATTGTAGCTTTAGCTGCTTTAGATGTCACCTCTATTTGTTGGAGCAGGGATTATGTCAGCATTTGACTGCAAGTTCTATTTTGTGATGTTATAGTTTTCAGTATTTGTTTGTCTCTGAATGCTAGTATGCCCAAGTTTCTTACAATAGTATTCCATTTTCTGAACATGCACAGCTTTGCATTTAGATTCATCTAAAAGATCAAGGAAGATGTACTCTTCTCCACTTTTACTTCAATTTCTGCACTAATTAGTCGTAAGGCCCTCATAGTTGAGTTGAGTGGCAGTTTCGAAGCTAGCCAACACATTTGAGGCTGAGGCTGAGGGTATCTTGTTGTTATATGTATTTGTGCACACACTTACCTTCTGGAAAAAATACTGTTGAGATTTTCAAACTAGTCATATTTTATGAGGGATGAAATTTGTTAGATTTCATTTTGTTTTTCAATCATTGGAGTTTTTGAGAATGAGTTTCTAGTTCTGAATTTGTTCTTATAAACATTCCTCTAGGTCATGACGATGAACTATACGAGAGATATATTAGTGTCTGAATCAAATTTTGAGACTGATTTGAGCCTAAGTGTTGAGATATAATATTTGGAAAATATATTATTCTAATTAGTTATAGAATATATCTTAGATATTGTTTATCAGTTAATATTCTTTATTTATGATTTATATATTATTCTAATTAGTTATAGAATATATCTTAGATATTGTTTATCAGTTAATATTCTTTATTTATGATTTGATTAGTAGTATATTTTATTTTATTCTCAATATTTAATTAATTTATATTTCCTTATCGGGAGGTATTAGTTGGTAGCTTGGATTCTATTGAAACATTATGAATATCAATGAGAATACACACCTTCAATTACAATTCTATTTCTCATTATTAACATGGTATCAGAACACCGATCTTGGGATTCTTAAATATCAAAATTTGCTAGGGTTTGGTAAGCCAAACTCTAACTCAATCAGTAAGCCATTAAAAATGAGAAATAGAATTGGGATCGAATGTGGGTATTTTAATGGATATTCATAACATTTAAATAGGATACATGGGATCAAAGGTGGGTATTTTGATGGATATTCATAACATTTAAATAAGGTGGGTATTTTAATGGATATTCATAACATTTAAATAGGATACATGGGATCAAAGGTGGGTATTATGATGGATATTCATAACATTTAAATAGAATACAAGCTACTAACTAGGAAAATATAAACTAATTAAATATTAAGAATAAAATAAAATATACTATTAATCAAATCAGGAAGTTAATAATGAAGTTAAGAATATGAACTGATTACGAATATATAAGATATATTCCATAGCTAATTATTATAATATATTCTCTAAATATTATATCTGACCATCAATTTGTTGAAATCGAAGGTACTTTCTTTGTTCAACTTAATGACTTCTTTGAATTGAAGATCAATGCATAACTGTTTTTTTCCTTGAAAATATCATGCAGAATGGTCCGATTCATGTAAAGTTCATTGTAAACAATTAGGGATGCGTCACACAACCCACTAAGGTAAACCATTGCTTTTACAAAACTCTTATCATTTTATTTACTCGTCAAACTTTAACAAAAATGGTTAATGTTCACTTTTAATGGTTTCAAATTATCCCATATCTCATTGGTTTGATATTATTGCTCATATTTCCTTTGTTATGGAGAAGATTTTGATTCATAACTATGTTGTGAAAATTCAGATGGTAATGGAGGACTGATAGAGATAATAAAGTTTGATGTCAAGGAATCCAACTCTGGTTGCTACTTTCAATACTAAACTAATACTAAACTAGAATGAAGGTTAAAGTTGAAAGGAGT GCGCTCCATCAACGGCATTTTTGCCTCGTCCCGGCGATGAAAAAAAGAGAAGAGAGGAGGACGACGAACTCTTATATCATTGAGATTGGTTCCGATAACAGAGAGGGGAAGAACAAAGCAGTTGCTCATGATGGAGTGATTGCTCAGGAGAAAGAAAATCAGTTGGTCCTGTCATTGAGGCCGGTGGGATTTTCGCATCTGCTAAGAATACTGAATGGTCCGATTCATGTAAAGTTCATTGTAAACAATTAGGGATGCGTCACACAACCCACTAAGATGGTAATGGAGGACTGATAGAGATAATAAAGTTTGATGTCAAGGAATCCAACTCTGGTTGCTACTTTCAATACTAAACTAATACTAAACTAGAATGAAGGTTAAAGTTGAAAGGAGT ATGAAAAAAAGAGAAGAGAGGAGGACGACGAACTCTTATATCATTGAGATTGGTTCCGATAACAGAGAGGGGAAGAACAAAGCAGTTGCTCATGATGGAGTGATTGCTCAGGAGAAAGAAAATCAGTTGGTCCTGTCATTGAGGCCGGTGGGATTTTCGCATCTGCTAAGAATACTGAATGGTCCGATTCATGTAAAGTTCATTGTAAACAATTAG MKKREERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRILNGPIHVKFIVNN Homology
BLAST of CmoCh04G008780 vs. ExPASy TrEMBL
Match: A0A6J1ING1 (uncharacterized protein LOC111478006 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478006 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09 Identity = 41/71 (57.75%), Postives = 49/71 (69.01%), Query Frame = 0
BLAST of CmoCh04G008780 vs. ExPASy TrEMBL
Match: A0A6J1IL14 (uncharacterized protein LOC111478006 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478006 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.2e-06 Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0
BLAST of CmoCh04G008780 vs. ExPASy TrEMBL
Match: A0A6J1FJ97 (uncharacterized protein LOC111446232 OS=Cucurbita moschata OX=3662 GN=LOC111446232 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 7.0e-04 Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of CmoCh04G008780 vs. NCBI nr
Match: KAG6600651.1 (hypothetical protein SDJN03_05884, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 140.6 bits (353), Expect = 5.3e-30 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of CmoCh04G008780 vs. NCBI nr
Match: KAG7031288.1 (hypothetical protein SDJN02_05328, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 109.0 bits (271), Expect = 1.7e-20 Identity = 58/71 (81.69%), Postives = 60/71 (84.51%), Query Frame = 0
BLAST of CmoCh04G008780 vs. NCBI nr
Match: KAG7030840.1 (hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 73.9 bits (180), Expect = 6.1e-10 Identity = 41/55 (74.55%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of CmoCh04G008780 vs. NCBI nr
Match: KAG6600176.1 (hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 73.9 bits (180), Expect = 6.1e-10 Identity = 41/55 (74.55%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of CmoCh04G008780 vs. NCBI nr
Match: KAG7011932.1 (hypothetical protein SDJN02_26840, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 73.6 bits (179), Expect = 7.9e-10 Identity = 41/55 (74.55%), Postives = 42/55 (76.36%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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