CmoCh04G008320 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G008320
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	40S ribosomal protein SA
Location	Cmo_Chr04: 4151579 .. 4153358 (-)
RNA-Seq Expression	CmoCh04G008320
Synteny	CmoCh04G008320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTGGAACAGAACAGCGTCAACTCACGCAGAAGGAGGCGGACATTCAGATGATGTTGGCCGCTGAGGTTCATCTAGGTACTAAAAACTGCAATTTCCAGATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGTACGTTGTTAGTAATTTCTCATTTAGACCTTCGTAGTTGGTTAACACCGTAAAGGATTTCCTATAGGCGATTAGAAGAAAGCCTTTTTTTCCTCTCTATCCTCTCTGTTTTCATCATTGGCGGTGGTTTTAGATTGGACTAGATATAACGGGTGTGGCTATTATTCTGAACAGTACTTCAAACCTTAATTTTTAGAACGAATCTCTCAGGACCAGAATGGGATCATAATTTCATCAATAGTCACGAATTATTCTTTCTTTCTCTCTATGTAGGAATCTACATTATTAACCTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATCGAGAATCCTCAAGACATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCACACCCCTGGAACATTCACCAACCAGCTTCAGACCTCATTCAACGAGCCACGTCTTCTGATACTTACTGATCCTAGAACTGATCATCAGGTGCTTCAACATTTTTAAGAATCAATACTAGTTTGTGATTATAAGTTTGAGTCCAATCTCTTACCAAATTTAGATTTATTCATGTTTATTACCCTAGTTAGTTATAACTTGTACCCGACTTCACTTGTTGTTGCTGCTATTTATGTTGCCTGGTTGGTTTCTTGCTGTTGTTGCAGCCCATCAAGGAAGGTGCCCTTGGAAACATTCCTACAATTGCCTTTTGCGACACTGATTCACCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGTTTTGCAAATGCGTGGAACAGTTCGTCCTGGGCACAAATGGGACGTGATGGTAACTTCTCAGTTCTATTATCTATCTGAACTTGAGAAATTGCATTCTGACATGGAATTTGAAATGATACTTGATTGTTAAAACGTAAATCAAAAGCTTGGAATGAATATCGAAGGTGTGTTTGTTCTGTAGGTGGATTTGTTTTTCTACCGGGAGCCTGAGGAGGCAAAGGAGAAAGAGGAAGAACAGGCTGTTGCGCCACCAGATTATGGCATTGCAGATTTTGGTGCTGCTCCGCTGGTAGCGGATCGATGGGTTGCTGATGCTCAGTGGGATGCTCCTGATATGGTTCCAGCTGCTGCTGCTGCTGCTGCTCCAGTTTCTAATGTGGAGTGGGCCCTAGAGCCAGGTTGAATCCGAGCCTTTTGTTTTAGGCTTTATTCTAATGCCTATAATATTCCCATTTTGGTCTAAGTTTTGAAGTGGTACCTACTACTTCCAATCATCTTGTAGTTTGTTAGCCATTGGTGTGATTTTCCAGTCCCAATCTTTTTTATTTTGTATTTTAGACTTCATTGACCAGGAATTTTAAGATGCAATCAGTTAGGTTGGTCGTCTAATTTAGTTCAACAGAATGAAGGTTAAGATGTTTTTAATGCTCATTGTGGGTATTTTTTTTTTGTCATTCGCCGTTTGCAGTCGCTCTTGGAGGAGCAGCAGATGGATGGGATGTTGCAGAAGCACCACCAGCACCTTTACTGGAAGCTGGTGCACCTCCAGCCGCCAGTTAG

mRNA sequence

ATGGCGACTGGAACAGAACAGCGTCAACTCACGCAGAAGGAGGCGGACATTCAGATGATGTTGGCCGCTGAGGTTCATCTAGGTACTAAAAACTGCAATTTCCAGATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACCTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATCGAGAATCCTCAAGACATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCACACCCCTGGAACATTCACCAACCAGCTTCAGACCTCATTCAACGAGCCACGTCTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCCCTTGGAAACATTCCTACAATTGCCTTTTGCGACACTGATTCACCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGTTTTGCAAATGCGTGGAACAGTTCGTCCTGGGCACAAATGGGACGTGATGGTGGATTTGTTTTTCTACCGGGAGCCTGAGGAGGCAAAGGAGAAAGAGGAAGAACAGGCTGTTGCGCCACCAGATTATGGCATTGCAGATTTTGGTGCTGCTCCGCTGGTAGCGGATCGATGGGTTGCTGATGCTCAGTGGGATGCTCCTGATATGGTTCCAGCTGCTGCTGCTGCTGCTGCTCCAGTTTCTAATGTGGAGTGGGCCCTAGAGCCAGTCGCTCTTGGAGGAGCAGCAGATGGATGGGATGTTGCAGAAGCACCACCAGCACCTTTACTGGAAGCTGGTGCACCTCCAGCCGCCAGTTAG

Coding sequence (CDS)

ATGGCGACTGGAACAGAACAGCGTCAACTCACGCAGAAGGAGGCGGACATTCAGATGATGTTGGCCGCTGAGGTTCATCTAGGTACTAAAAACTGCAATTTCCAGATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACCTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATCGAGAATCCTCAAGACATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCACACCCCTGGAACATTCACCAACCAGCTTCAGACCTCATTCAACGAGCCACGTCTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCCCTTGGAAACATTCCTACAATTGCCTTTTGCGACACTGATTCACCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGTTTTGCAAATGCGTGGAACAGTTCGTCCTGGGCACAAATGGGACGTGATGGTGGATTTGTTTTTCTACCGGGAGCCTGAGGAGGCAAAGGAGAAAGAGGAAGAACAGGCTGTTGCGCCACCAGATTATGGCATTGCAGATTTTGGTGCTGCTCCGCTGGTAGCGGATCGATGGGTTGCTGATGCTCAGTGGGATGCTCCTGATATGGTTCCAGCTGCTGCTGCTGCTGCTGCTCCAGTTTCTAATGTGGAGTGGGCCCTAGAGCCAGTCGCTCTTGGAGGAGCAGCAGATGGATGGGATGTTGCAGAAGCACCACCAGCACCTTTACTGGAAGCTGGTGCACCTCCAGCCGCCAGTTAG

Protein sequence

MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPAAS

Homology

[Close]

BLAST of CmoCh04G008320 vs. ExPASy Swiss-Prot
Match: A5BUU4 (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 5.1e-125
Identity = 240/312 (76.92%), Postives = 255/312 (81.73%), Query Frame = 0


Query: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T  R L+QKE DIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATPT--RALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  QLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAP---LV 240
           ARMVLQMR T+ PGHKWDVMVDLFFYREPEE KE+E ++ VA PDYGI D+ A     L 
Sbjct: 181 ARMVLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLG 240

Query: 241 ADRW---VADA-QWDAPDMVPAAAAAAAPVSN-VEWALEPVALGGAADGWDVAEAPPA-- 300
              W   + DA QW A D+   A   A P SN  + A  P A+  A DGWD A APP   
Sbjct: 241 GGDWGAPITDAPQWGA-DVPAVAPIPAVPGSNWGDAAPMPSAVPIATDGWDAAAAPPVAV 300

[Close]

BLAST of CmoCh04G008320 vs. ExPASy Swiss-Prot
Match: O22518 (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 6.2e-123
Identity = 225/289 (77.85%), Postives = 237/289 (82.01%), Query Frame = 0


Query: 2   ATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ 61
           A     RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTWEKLQ
Sbjct: 7   AAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQ 66

Query: 62  MAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEP 121
           +AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+EP
Sbjct: 67  LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 126

Query: 122 RLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 181
           RLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA
Sbjct: 127 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 186

Query: 182 RMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVAD-R 241
           RMVLQMRGT+RPG KWDVMVDLFFYREPEEAK++EEE+A A  DY I DF A  + AD +
Sbjct: 187 RMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPA-VDYAITDFNAGAIAADGQ 246

Query: 242 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPP 290
           W         D VP    A   V  V W     A   A   W  A  PP
Sbjct: 247 WPGTIDQSWSDAVPQPIPA---VPGVNWGAPAEAPAAAGGDWGEAVPPP 291

[Close]

BLAST of CmoCh04G008320 vs. ExPASy Swiss-Prot
Match: O65751 (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.5e-121
Identity = 230/302 (76.16%), Postives = 248/302 (82.12%), Query Frame = 0


Query: 1   MATGT-EQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT T   RQLTQKEADIQMMLAA+VHLGTKNCNFQMERY+FKRRNDGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 61  LQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120
           L +AAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVAD 240
           LARMVLQMRGT+RPG KWDVMVDLFFYREPEEAK+ EE++ VA PDY IADF  + + +D
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDE-VAAPDYAIADFNVSAIPSD 240

Query: 241 -RWVA--DAQWD--APDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLE 297
            +W A  D  W+   P  +PA  A       V WA  P A+ G    W  A  PP  +  
Sbjct: 241 GQWPAAIDQPWNDAVPQPIPAVPA-------VNWA-APEAVAG---DWGEAVPPPQQIPT 290

[Close]

BLAST of CmoCh04G008320 vs. ExPASy Swiss-Prot
Match: O80377 (40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 4.9e-120
Identity = 225/295 (76.27%), Postives = 245/295 (83.05%), Query Frame = 0


Query: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MA+G   R+L+  EADIQMM AAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MASGA--RELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
            +AARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  MLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPL-VAD 240
           ARMVLQMRG +  GHKW+VMVDLFFYREPEE K++EEE  +   DY +AD+ AAP+  AD
Sbjct: 181 ARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEED-LPVGDY-VADYAAAPIGGAD 240

Query: 241 RW--VADAQWDAPDMVPAAAAAAAPVSNVEWA-LEPVALGGAADGWDVAEAPPAP 292
           +W  + DAQW    + PA +A  A      W    P+    A DGWD A APP P
Sbjct: 241 QWNAIPDAQWGGDVVQPANSAVPAGT----WTDAGPI----AGDGWDAAAAPPVP 283

[Close]

BLAST of CmoCh04G008320 vs. ExPASy Swiss-Prot
Match: Q9ZSR8 (40S ribosomal protein SA OS=Brassica napus OX=3708 GN=LRP PE=2 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 4.3e-116
Identity = 209/282 (74.11%), Postives = 229/282 (81.21%), Query Frame = 0


Query: 9   QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIV 68
           QL+QKEADI+MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKL MAARVIV
Sbjct: 8   QLSQKEADIKMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLMMAARVIV 67

Query: 69  AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTD 128
           AIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 68  AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 127

Query: 129 PRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 188
           PRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 128 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 187

Query: 189 GTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGI--ADFGAAPLVADRWVADAQ 248
           GT+RP  KWDVMVDLFFYREPEE K ++E++     ++G+   ++G         + DA 
Sbjct: 188 GTIRPAQKWDVMVDLFFYREPEETKPEDEDEVAPQAEFGLPAPEYGGGDQWTTAAIPDAA 247

Query: 249 WDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAP 289
           W      P +AA AA   N     +  A   A  GWD A  P
Sbjct: 248 WPGEAQAPISAAPAAGSWN-----DSAAPAAAEGGWDAAVPP 284

[Close]

BLAST of CmoCh04G008320 vs. ExPASy TrEMBL
Match: A0A6J1FSL7 (40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111447777 PE=3 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 1.7e-171
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240
           ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 300
           WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 300

Query: 301 AS 303
           AS
Sbjct: 301 AS 302

[Close]

BLAST of CmoCh04G008320 vs. ExPASy TrEMBL
Match: A0A6J1J410 (40S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111481047 PE=3 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 9.1e-170
Identity = 299/302 (99.01%), Postives = 299/302 (99.01%), Query Frame = 0


Query: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240
           ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 300
           WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWD AEAPPAPL E GAPPA
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA 300

Query: 301 AS 303
           AS
Sbjct: 301 AS 302

[Close]

BLAST of CmoCh04G008320 vs. ExPASy TrEMBL
Match: A0A6J1C6Q9 (40S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111008481 PE=3 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.6e-152
Identity = 276/302 (91.39%), Postives = 284/302 (94.04%), Query Frame = 0


Query: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240
           ARMVLQMRGT+R GHKWDVMVDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQ 240

Query: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEA-PPAPLLEAGAPP 300
           W  DAQW A D+VP  AAAAAP SNVEWA EPVAL GAADGWD A A PPAP +EAGAPP
Sbjct: 241 WAPDAQWGASDVVP--AAAAAPASNVEWAQEPVAL-GAADGWDAAVARPPAPPVEAGAPP 298

Query: 301 AA 302
           A+
Sbjct: 301 AS 298

[Close]

BLAST of CmoCh04G008320 vs. ExPASy TrEMBL
Match: A0A5A7TNP4 (40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005420 PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 4.7e-150
Identity = 269/301 (89.37%), Postives = 281/301 (93.36%), Query Frame = 0


Query: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATG EQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240
           ARMVLQMRGTVRPG+KWDVMVDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 300
           WV DAQWDA ++ P AAAA+  VSNVEWA EPV   GAADGW VA  PPAP LEA APP+
Sbjct: 241 WVPDAQWDASNVAPTAAAAS--VSNVEWAQEPV---GAADGWGVAIPPPAPSLEAVAPPS 296

Query: 301 A 302
           +
Sbjct: 301 S 296

[Close]

BLAST of CmoCh04G008320 vs. ExPASy TrEMBL
Match: A0A1S3BXR8 (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103494374 PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 4.7e-150
Identity = 269/301 (89.37%), Postives = 281/301 (93.36%), Query Frame = 0


Query: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATG EQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240
           ARMVLQMRGTVRPG+KWDVMVDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 300
           WV DAQWDA ++ P AAAA+  VSNVEWA EPV   GAADGW VA  PPAP LEA APP+
Sbjct: 241 WVPDAQWDASNVAPTAAAAS--VSNVEWAQEPV---GAADGWGVAIPPPAPSLEAVAPPS 296

Query: 301 A 302
           +
Sbjct: 301 S 296

[Close]

BLAST of CmoCh04G008320 vs. NCBI nr
Match: XP_022942879.1 (40S ribosomal protein SA-like [Cucurbita moschata])

HSP 1 Score: 611.7 bits (1576), Expect = 3.4e-171
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240
           ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 300
           WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 300

Query: 301 AS 303
           AS
Sbjct: 301 AS 302

[Close]

BLAST of CmoCh04G008320 vs. NCBI nr
Match: KAG6600605.1 (40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 606.7 bits (1563), Expect = 1.1e-169
Identity = 302/304 (99.34%), Postives = 302/304 (99.34%), Query Frame = 0


Query: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240
           ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WVADAQWDAPDMVP--AAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAP 300
           WVADAQWDAPDMVP  AAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAP
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAP 300

Query: 301 PAAS 303
           PAAS
Sbjct: 301 PAAS 304

[Close]

BLAST of CmoCh04G008320 vs. NCBI nr
Match: XP_022982113.1 (40S ribosomal protein SA-like [Cucurbita maxima])

HSP 1 Score: 605.9 bits (1561), Expect = 1.9e-169
Identity = 299/302 (99.01%), Postives = 299/302 (99.01%), Query Frame = 0


Query: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240
           ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 300
           WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWD AEAPPAPL E GAPPA
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA 300

Query: 301 AS 303
           AS
Sbjct: 301 AS 302

[Close]

BLAST of CmoCh04G008320 vs. NCBI nr
Match: KAG7031241.1 (40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 603.6 bits (1555), Expect = 9.4e-169
Identity = 300/304 (98.68%), Postives = 301/304 (99.01%), Query Frame = 0


Query: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240
           ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WVADAQWDAPDMVP--AAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAP 300
           WVADAQWDAPDMVP  AAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAG P
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGPP 300

Query: 301 PAAS 303
           PAA+
Sbjct: 301 PAAN 304

[Close]

BLAST of CmoCh04G008320 vs. NCBI nr
Match: XP_023554616.1 (40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 602.1 bits (1551), Expect = 2.7e-168
Identity = 300/305 (98.36%), Postives = 300/305 (98.36%), Query Frame = 0


Query: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240
           ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WVADAQWDAPDMVP---AAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGA 300
           WVADAQWDAPDMVP   AAAAAAAPVSNVEWALEPVALG AADGWDVAEAPPAPLLEAG 
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAAAAPVSNVEWALEPVALGAAADGWDVAEAPPAPLLEAGP 300

Query: 301 PPAAS 303
           PPAAS
Sbjct: 301 PPAAS 305

[Close]

BLAST of CmoCh04G008320 vs. TAIR 10
Match: AT1G72370.1 (40s ribosomal protein SA )

HSP 1 Score: 414.8 bits (1065), Expect = 5.8e-116
Identity = 217/297 (73.06%), Postives = 238/297 (80.13%), Query Frame = 0


Query: 9   QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIV 68
           QL+QKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIV
Sbjct: 11  QLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70

Query: 69  AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTD 128
           AIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 71  AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 130

Query: 129 PRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 188
           PRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 131 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 190

Query: 189 GTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLV-ADRW----VA 248
           GT+  G KWDVMVDLFFYREPEE K ++E++A    +YG        +V  D+W    + 
Sbjct: 191 GTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVGGDQWTTAQIP 250

Query: 249 DAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 301
           DA W      P +AA AA      W+    A   A  GW+ A APP     +GAP A
Sbjct: 251 DAAWPGEGQAPISAAPAA----ASWS--DSAAAPADGGWEAA-APP-----SGAPAA 295

[Close]

BLAST of CmoCh04G008320 vs. TAIR 10
Match: AT1G72370.2 (40s ribosomal protein SA )

HSP 1 Score: 414.5 bits (1064), Expect = 7.5e-116
Identity = 216/297 (72.73%), Postives = 237/297 (79.80%), Query Frame = 0


Query: 9   QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIV 68
           QL+QKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIV
Sbjct: 11  QLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70

Query: 69  AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTD 128
           AIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 71  AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 130

Query: 129 PRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 188
           PRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 131 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 190

Query: 189 GTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLV-ADRW----VA 248
           GT+  G KWDVMVDLFFYREPEE K ++E++A    +YG        +V  D+W    + 
Sbjct: 191 GTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVGGDQWTTAQIP 250

Query: 249 DAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 301
           DA W      P +AA AA      W+        A  GW+ A APP     +GAP A
Sbjct: 251 DAAWPGEGQAPISAAPAA----ASWS------DSADGGWEAA-APP-----SGAPAA 291

[Close]

BLAST of CmoCh04G008320 vs. TAIR 10
Match: AT3G04770.2 (40s ribosomal protein SA B )

HSP 1 Score: 411.8 bits (1057), Expect = 4.9e-115
Identity = 208/290 (71.72%), Postives = 233/290 (80.34%), Query Frame = 0


Query: 5   TEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAA 64
           T  RQ+++KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQMAA
Sbjct: 8   TAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAA 67

Query: 65  RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLL 124
           RVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTPGTFTNQ+QTSF+EPRLL
Sbjct: 68  RVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLL 127

Query: 125 ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMV 184
           ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMV
Sbjct: 128 ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMV 187

Query: 185 LQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRW--- 244
           LQMRGT+    KWDVMVDLFFYREPEEAK++ +E+A    DYG+          D+W   
Sbjct: 188 LQMRGTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADYGMVG-------GDQWTTA 247

Query: 245 -VADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPA 291
            ++DA W      P +AA A  V+              A GW+ A  P A
Sbjct: 248 QISDAAWSGEVEQPISAAPAVGVT-------------VAAGWEAASVPAA 277

[Close]

BLAST of CmoCh04G008320 vs. TAIR 10
Match: AT3G04770.1 (40s ribosomal protein SA B )

HSP 1 Score: 370.5 bits (950), Expect = 1.2e-102
Identity = 175/198 (88.38%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 5   TEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAA 64
           T  RQ+++KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQMAA
Sbjct: 8   TAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAA 67

Query: 65  RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLL 124
           RVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTPGTFTNQ+QTSF+EPRLL
Sbjct: 68  RVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLL 127

Query: 125 ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMV 184
           ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMV
Sbjct: 128 ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMV 187

Query: 185 LQMRGTVRPGHKWDVMVD 203
           LQMRGT+    KWDVMV+
Sbjct: 188 LQMRGTILAAQKWDVMVN 205

The following BLAST results are available for this feature:

BLAST of CmoCh04G008320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A5BUU4	5.1e-125	76.92	40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV...	[more]
O22518	6.2e-123	77.85	40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1	[more]
O65751	1.5e-121	76.16	40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1	[more]
O80377	4.9e-120	76.27	40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1	[more]
Q9ZSR8	4.3e-116	74.11	40S ribosomal protein SA OS=Brassica napus OX=3708 GN=LRP PE=2 SV=1	[more]

BLAST of CmoCh04G008320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSL7	1.7e-171	100.00	40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111447777 PE=3 SV=1	[more]
A0A6J1J410	9.1e-170	99.01	40S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111481047 PE=3 SV=1	[more]
A0A6J1C6Q9	6.6e-152	91.39	40S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111008481 PE=3 SV=...	[more]
A0A5A7TNP4	4.7e-150	89.37	40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BXR8	4.7e-150	89.37	40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103494374 PE=3 SV=1	[more]

BLAST of CmoCh04G008320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942879.1	3.4e-171	100.00	40S ribosomal protein SA-like [Cucurbita moschata]	[more]
KAG6600605.1	1.1e-169	99.34	40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022982113.1	1.9e-169	99.01	40S ribosomal protein SA-like [Cucurbita maxima]	[more]
KAG7031241.1	9.4e-169	98.68	40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023554616.1	2.7e-168	98.36	40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh04G008320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72370.1	5.8e-116	73.06	40s ribosomal protein SA	[more]
AT1G72370.2	7.5e-116	72.73	40s ribosomal protein SA	[more]
AT3G04770.2	4.9e-115	71.72	40s ribosomal protein SA B	[more]
AT3G04770.1	1.2e-102	88.38	40s ribosomal protein SA B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001865	Ribosomal protein S2	PRINTS	PR00395	RIBOSOMALS2	coord: 121..138 score: 44.62 coord: 159..173 score: 53.64 coord: 138..149 score: 46.03 coord: 47..56 score: 64.92 coord: 96..113 score: 47.01 coord: 17..35 score: 35.79
IPR001865	Ribosomal protein S2	PFAM	PF00318	Ribosomal_S2	coord: 119..184 e-value: 5.8E-11 score: 42.0 coord: 20..113 e-value: 5.2E-14 score: 52.0
IPR001865	Ribosomal protein S2	CDD	cd01425	RPS2	coord: 20..186 e-value: 1.38348E-72 score: 220.146
None	No IPR available	GENE3D	3.40.50.10490		coord: 16..222 e-value: 1.8E-103 score: 346.2
None	No IPR available	PANTHER	PTHR11489:SF25	40S RIBOSOMAL PROTEIN SA	coord: 9..296
IPR005707	Ribosomal protein S2, eukaryotic/archaeal	TIGRFAM	TIGR01012	TIGR01012	coord: 12..208 e-value: 1.8E-96 score: 319.2
IPR005707	Ribosomal protein S2, eukaryotic/archaeal	PANTHER	PTHR11489	40S RIBOSOMAL PROTEIN SA	coord: 9..296
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00963	RIBOSOMAL_S2_2	coord: 121..145
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00962	RIBOSOMAL_S2_1	coord: 17..28
IPR027498	Ribosomal protein S2, eukaryotic	HAMAP	MF_03015	Ribosomal_S2_euk	coord: 2..271 score: 50.282116
IPR023591	Ribosomal protein S2, flavodoxin-like domain superfamily	SUPERFAMILY	52313	Ribosomal protein S2	coord: 12..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G008320.1	CmoCh04G008320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome