CmoCh04G008070 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G008070
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionGATA transcription factor 19-like
LocationCmo_Chr04: 4030807 .. 4031952 (-)
RNA-Seq ExpressionCmoCh04G008070
SyntenyCmoCh04G008070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCACCACTGCGGCGGCGGCGCCGGCGGAGCTGCCTCTTCATTTTCCGTCTTTTTGTCGGTGCCCAACCACGGTGGCGCTGCCCATGACATGATGGACATCTACTCTAATAATTATGCCTCCTCCTCCTCCTCCTCTTCTTCTTCTCCTTCATCCGTTGATTGTACTCTCTCTCTTGGTACTCCCTCTACGCGATCGTCGGAGTTCGATTCCGACAAACGCGCCGCCCCCCGCCATCACCGCCGCTCCGCTGGTTCTTATGTCTCTAACTTCTGTTGGGACTTGTTGCATCCTAAACACAAGAGTGCTGGCCGTTCCACGGCGAGTAATGCCGCCGCTGTCCCTTCCGGTGGCGATCCGCTCCTCGCTCGGCGGTGCGCTAACTGCGATACCACTTCTACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGGTAAATCACGTGATTTCAAATTATGGAAATTATTTTAATTTTCTTTTTTGTTTTTTAAATGTAAATTATTTTTTAAAGTTCTAACAATTGTTTATAATAGAGATTCTATTCTGATTTTAGTAATTTGTTGGAGTTCTGGTTAAGTTACCGATGCTTATGTTATTTAGAATAATTTTATTGGTTAAAACGTTATAATTTTAATTAAAAATTACTATAAATTTGAATTAAAGAAGAATATAGATAGACTAAATTCAATGTAATTACTTTTTTATTGTAACAATAAAATTTGAATTTATTTATTTAATTGAAATGCAGTCCCTATGCAATGCGTGTGGGATTCGTTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACTGCACGGCTACCGCAATGGCGGCGGAATCTAACAACCACCATCACCTCCACCAACACCACCAGATGTTCAACGGAAACTACACGAATTCAACCGCTGCGTGGGTTCCACACCACTCGCCAGTGGCAACCCAGAAACTCCCGTGCCTGTCGGCGGCGGCTATTAACAACGAATCAATGTTTATAGGAAACGACGACGTTCGAAGAACCGAACAAGAAAATGGCATCTCGTATCTCTCTTGGCGCCTCAACGTTACCGATCACCGGCCCAGCCTCGTCCATGACTTCACAAGATGATCCCCCCCAGACCCAGATCAATGGAGAAGCCCT

mRNA sequence

ATGATGCACCACTGCGGCGGCGGCGCCGGCGGAGCTGCCTCTTCATTTTCCGTCTTTTTGTCGGTGCCCAACCACGGTGGCGCTGCCCATGACATGATGGACATCTACTCTAATAATTATGCCTCCTCCTCCTCCTCCTCTTCTTCTTCTCCTTCATCCGTTGATTGTACTCTCTCTCTTGGTACTCCCTCTACGCGATCGTCGGAGTTCGATTCCGACAAACGCGCCGCCCCCCGCCATCACCGCCGCTCCGCTGGTTCTTATGTCTCTAACTTCTGTTGGGACTTGTTGCATCCTAAACACAAGAGTGCTGGCCGTTCCACGGCGAGTAATGCCGCCGCTGTCCCTTCCGGTGGCGATCCGCTCCTCGCTCGGCGGTGCGCTAACTGCGATACCACTTCTACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGTCCCTATGCAATGCGTGTGGGATTCGTTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACTGCACGGCTACCGCAATGGCGGCGGAATCTAACAACCACCATCACCTCCACCAACACCACCAGATGTTCAACGGAAACTACACGAATTCAACCGCTGCGTGGGTTCCACACCACTCGCCAGTGGCAACCCAGAAACTCCCGTGCCTGTCGGCGGCGGCTATTAACAACGAATCAATGTTTATAGGAAACGACGACGTTCGAAGAACCGAACAAGAAAATGGCATCTCGTATCTCTCTTGGCGCCTCAACGTTACCGATCACCGGCCCAGCCTCGTCCATGACTTCACAAGATGATCCCCCCCAGACCCAGATCAATGGAGAAGCCCT

Coding sequence (CDS)

ATGATGCACCACTGCGGCGGCGGCGCCGGCGGAGCTGCCTCTTCATTTTCCGTCTTTTTGTCGGTGCCCAACCACGGTGGCGCTGCCCATGACATGATGGACATCTACTCTAATAATTATGCCTCCTCCTCCTCCTCCTCTTCTTCTTCTCCTTCATCCGTTGATTGTACTCTCTCTCTTGGTACTCCCTCTACGCGATCGTCGGAGTTCGATTCCGACAAACGCGCCGCCCCCCGCCATCACCGCCGCTCCGCTGGTTCTTATGTCTCTAACTTCTGTTGGGACTTGTTGCATCCTAAACACAAGAGTGCTGGCCGTTCCACGGCGAGTAATGCCGCCGCTGTCCCTTCCGGTGGCGATCCGCTCCTCGCTCGGCGGTGCGCTAACTGCGATACCACTTCTACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGTCCCTATGCAATGCGTGTGGGATTCGTTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACTGCACGGCTACCGCAATGGCGGCGGAATCTAACAACCACCATCACCTCCACCAACACCACCAGATGTTCAACGGAAACTACACGAATTCAACCGCTGCGTGGGTTCCACACCACTCGCCAGTGGCAACCCAGAAACTCCCGTGCCTGTCGGCGGCGGCTATTAACAACGAATCAATGTTTATAGGAAACGACGACGTTCGAAGAACCGAACAAGAAAATGGCATCTCGTATCTCTCTTGGCGCCTCAACGTTACCGATCACCGGCCCAGCCTCGTCCATGACTTCACAAGATGA

Protein sequence

MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNNHHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR
Homology
[Close]
BLAST of CmoCh04G008070 vs. ExPASy Swiss-Prot
Match: Q8LC79 (GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 3.6e-42
Identity = 127/282 (45.04%), Postives = 155/282 (54.96%), Query Frame = 0 

Query: 13  ASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDS 72
           A S+S+  S+ N G        ++  N      SS    S VDCTLSLGTPSTR  E D 
Sbjct: 38  AGSYSMVFSMQNGG--------VFEQNGEDYHHSS----SLVDCTLSLGTPSTRLCEEDE 97

Query: 73  DKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASN----AAAVPS----------- 132
            +R   R     A S +SNF WDL+H K+ ++  +  +N    +A  PS           
Sbjct: 98  KRR---RSTSSGASSCISNF-WDLIHTKNNNSKTAPYNNVPSFSANKPSRGCSGGGGGGG 157

Query: 133 ---GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR-AAATVNCTATA 192
              GGD LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR  AAT N    A
Sbjct: 158 GGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGNTVVGA 217

Query: 193 MAAESNNHHH----LHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFI 252
              +++ + H     + +H   N N  N T  W  HHS   TQ++PC   A   NE  F+
Sbjct: 218 APVQTDQYGHHNSGYNNYHAATNNNNNNGT-PWAHHHS---TQRVPCNYPA---NEIRFM 277

Query: 253 GN------DDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 266
            +      ++V       G+ +LSWRLNV D R SLVHDFTR
Sbjct: 278 DDYGSGVANNVESDGAHGGVPFLSWRLNVAD-RASLVHDFTR 295

[Close]
BLAST of CmoCh04G008070 vs. ExPASy Swiss-Prot
Match: Q6QPM2 (GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2)

HSP 1 Score: 153.7 bits (387), Expect = 3.0e-36
Identity = 107/221 (48.42%), Postives = 124/221 (56.11%), Query Frame = 0 

Query: 45  SSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSA 104
           S  SS  +SVDCTLSLGTPSTR    D D+R    H   + G       WD L+   K  
Sbjct: 14  SHHSSPYASVDCTLSLGTPSTRLCNED-DERRFSSHTSDTIG-------WDFLNGSKKGG 73

Query: 105 GRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAA 164
           G            GG  LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA+
Sbjct: 74  G-----------GGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAS 133

Query: 165 ATVNCTATAMAAESNNHHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINN 224
              N T+   +  +      HQ    +  N  N  A+  P H    TQ++P  S A  NN
Sbjct: 134 TARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPWHHQHNTQRVPYYSPA--NN 193

Query: 225 ESMFIGNDDVRRTEQE-NGISYLSWRLNVTDHRPSLVHDFT 265
           E  ++  DDVR  + +     +LSWRLNV D R  LVHDFT
Sbjct: 194 EYSYV--DDVRVVDHDVTTDPFLSWRLNVAD-RTGLVHDFT 210

[Close]
BLAST of CmoCh04G008070 vs. ExPASy Swiss-Prot
Match: B8AX51 (GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.8e-25
Identity = 93/206 (45.15%), Postives = 109/206 (52.91%), Query Frame = 0 

Query: 1   MMHH-CGGGAGG-------------AASSFSVFLSVPN---------HGGAAHDMMDIYS 60
           M+HH   GGAG              A+S+FS+F  + N            AA+   D +S
Sbjct: 1   MLHHYYSGGAGHHQDVAAAGSPGDMASSTFSLFFPMSNGQCWPPSTVEESAAY---DDHS 60

Query: 61  NNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVS----NFC 120
               S SS SSSS  SVDCTLSLGTPS+R +E  +    A  H       Y S       
Sbjct: 61  TVTTSPSSPSSSSTGSVDCTLSLGTPSSRRAEPVAAAAPAANHGAPVPAHYPSLSAATVS 120

Query: 121 WDLLHPKH---KSAGRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCN 177
           WD     +   +    +T +   A  +G D LL RRCANC T STPLWRNGPRGPKSLCN
Sbjct: 121 WDATAESYYCGQQGRPATGAAKCAAGAGHDALLDRRCANCGTASTPLWRNGPRGPKSLCN 180

[Close]
BLAST of CmoCh04G008070 vs. ExPASy Swiss-Prot
Match: Q6L5E5 (GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.8e-25
Identity = 93/206 (45.15%), Postives = 109/206 (52.91%), Query Frame = 0 

Query: 1   MMHH-CGGGAGG-------------AASSFSVFLSVPN---------HGGAAHDMMDIYS 60
           M+HH   GGAG              A+S+FS+F  + N            AA+   D +S
Sbjct: 1   MLHHYYSGGAGHHQDVAAAGSPGDMASSTFSLFFPMSNGQCWPPSTVEESAAY---DDHS 60

Query: 61  NNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVS----NFC 120
               S SS SSSS  SVDCTLSLGTPS+R +E  +    A  H       Y S       
Sbjct: 61  TVTTSPSSPSSSSTGSVDCTLSLGTPSSRRAEPVAAAAPAANHGAPVPAHYPSLSAATVS 120

Query: 121 WDLLHPKH---KSAGRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCN 177
           WD     +   +    +T +   A  +G D LL RRCANC T STPLWRNGPRGPKSLCN
Sbjct: 121 WDATAESYYCGQQGRPATGAAKCAAGAGHDALLDRRCANCGTASTPLWRNGPRGPKSLCN 180

[Close]
BLAST of CmoCh04G008070 vs. ExPASy Swiss-Prot
Match: Q9ZPX0 (GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 2.0e-24
Identity = 90/216 (41.67%), Postives = 115/216 (53.24%), Query Frame = 0 

Query: 14  SSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSD 73
           S+FS+F S  N     H+  D Y NN++SS        +SVDCTLSLGTPSTR  +    
Sbjct: 8   SNFSMFFSSENDDQNHHN-YDPY-NNFSSS--------TSVDCTLSLGTPSTRLDD---- 67

Query: 74  KRAAPRHHRRSAGSYVSNFCWDL-LHPKHKSAGRSTASNAAAVPSGGDPLLARRCANCDT 133
                 HHR S+ +  +N   D  +H          A  ++    G    L RRCA+CDT
Sbjct: 68  ------HHRFSSAN-SNNISGDFYIH-------GGNAKTSSYKKGGVAHSLPRRCASCDT 127

Query: 134 TSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTAT---AMAAE----------SN 193
           TSTPLWRNGP+GPKSLCNACGIRFKKEERRA A  N T +   + AAE           N
Sbjct: 128 TSTPLWRNGPKGPKSLCNACGIRFKKEERRATAR-NLTISGGGSSAAEVPVENSYNGGGN 187

Query: 194 NHHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLP 216
            + H H H+   + ++ +     VP+ SPV   + P
Sbjct: 188 YYSHHHHHYASSSPSWAHQNTQRVPYFSPVPEMEYP 194

[Close]
BLAST of CmoCh04G008070 vs. ExPASy TrEMBL
Match: A0A6J1FQ08 (GATA transcription factor 19-like OS=Cucurbita moschata OX=3662 GN=LOC111447753 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 4.6e-149
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0 

Query: 1   MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60
           MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL
Sbjct: 1   MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120
           GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD
Sbjct: 61  GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120

Query: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN 180
           PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN
Sbjct: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN 180

Query: 181 HHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQE 240
           HHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQE
Sbjct: 181 HHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQE 240

Query: 241 NGISYLSWRLNVTDHRPSLVHDFTR 266
           NGISYLSWRLNVTDHRPSLVHDFTR
Sbjct: 241 NGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]
BLAST of CmoCh04G008070 vs. ExPASy TrEMBL
Match: A0A6J1IYZ2 (GATA transcription factor 19-like OS=Cucurbita maxima OX=3661 GN=LOC111481178 PE=3 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 3.2e-142
Identity = 258/266 (96.99%), Postives = 261/266 (98.12%), Query Frame = 0 

Query: 1   MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60
           MMHHC GGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL
Sbjct: 1   MMHHC-GGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120
           GTPSTRSSEFDSDKRAAPRHHR SAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD
Sbjct: 61  GTPSTRSSEFDSDKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120

Query: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN 180
           PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN
Sbjct: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN 180

Query: 181 HHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLS-AAAINNESMFIGNDDVRRTEQ 240
           HHH HQHHQMF+GNYTNS+A WVPHHSPVATQKLPCLS AAAI+NESMFIGNDDVRRTEQ
Sbjct: 181 HHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESMFIGNDDVRRTEQ 240

Query: 241 ENGISYLSWRLNVTDHRPSLVHDFTR 266
           ENGISYLSWRLNVTDHRPSLVHDFTR
Sbjct: 241 ENGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]
BLAST of CmoCh04G008070 vs. ExPASy TrEMBL
Match: A0A0A0KY15 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G046650 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 3.3e-91
Identity = 198/278 (71.22%), Postives = 214/278 (76.98%), Query Frame = 0 

Query: 1   MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60
           MMHH GGG GG+ASSFSVFLSVPNHG A     D+YS+  +++ +SSSSSPSSVDCTLSL
Sbjct: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAA-----DMYSS--STNYASSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKRAAP----RHHRRSAGSYVSNFCWDLLHPKHKSAGR----STASN- 120
           GTPSTRSSEFD DKRAA      HHRRSAGSYVSNFCWDLLHPKHK++GR      ASN 
Sbjct: 61  GTPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNN 120

Query: 121 --AAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNC 180
              AAV +GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA    
Sbjct: 121 NINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA---A 180

Query: 181 TATAMAAESNNHHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFI 240
           T  +  AESN+HHH H HH MFNG+YTNS   WVP   P  TQK PCLSAA        I
Sbjct: 181 TVNSSVAESNHHHH-HHHHPMFNGSYTNSN-TWVPQQLPATTQKHPCLSAA--------I 240

Query: 241 GNDDVRRTEQENGISYLSWRLNV--TDHRPSLVHDFTR 266
           GN+DV     ENGIS+LSWRLNV  TDHRP+LVHDFTR
Sbjct: 241 GNEDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 255

[Close]
BLAST of CmoCh04G008070 vs. ExPASy TrEMBL
Match: A0A1S3BSF9 (GATA transcription factor 18-like OS=Cucumis melo OX=3656 GN=LOC103493199 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 5.7e-91
Identity = 202/279 (72.40%), Postives = 215/279 (77.06%), Query Frame = 0 

Query: 1   MMHHC---GGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSN--NYASSSSSSSSSPSSVD 60
           MMHH    GGG GG ASSFS+FLSVPNHG A     D+YS+  NYASSSSSSSSSPSSVD
Sbjct: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAA-----DMYSSSTNYASSSSSSSSSPSSVD 60

Query: 61  CTLSLGTPSTRSSEFDSDKRAAPRH-HRRSAGSYVSNFCWDLLHPKHKSAGR---STASN 120
           CTLSLGTPSTRSSEFDSDKRAA R+ HRRSAGSYVSNFCWDLLHPKHK++GR     ASN
Sbjct: 61  CTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASN 120

Query: 121 ---AAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVN 180
               AAV + GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA   
Sbjct: 121 NNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA--- 180

Query: 181 CTATAMAAESNNHHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMF 240
            T  +  AESN+H     HH MFNG+YTNS + WVP   P  TQK PCLSAA        
Sbjct: 181 ATVNSSTAESNHH-----HHSMFNGSYTNS-STWVPQQLPATTQKHPCLSAA-------- 240

Query: 241 IGNDDVRRTEQENGISYLSWRLNV--TDHRPSLVHDFTR 266
           IGNDDV     ENGIS+LSWRLNV  TDHRP+LVHDFTR
Sbjct: 241 IGNDDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 254

[Close]
BLAST of CmoCh04G008070 vs. ExPASy TrEMBL
Match: A0A5D3CZ78 (GATA transcription factor 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005010 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 7.0e-81
Identity = 177/238 (74.37%), Postives = 187/238 (78.57%), Query Frame = 0 

Query: 37  SNNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRH-HRRSAGSYVSNFCWD 96
           S NYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAA R+ HRRSAGSYVSNFCWD
Sbjct: 5   STNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWD 64

Query: 97  LLHPKHKSAGR---STASN---AAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLC 156
           LLHPKHK++GR     ASN    AAV + GDPLLARRCANCDTTSTPLWRNGPRGPKSLC
Sbjct: 65  LLHPKHKTSGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLC 124

Query: 157 NACGIRFKKEERRAAATVNCTATAMAAESNNHHHLHQHHQMFNGNYTNSTAAWVPHHSPV 216
           NACGIRFKKEERRAAA    T  +  AESN+H     HH MFNG+YTNS + WVP   P 
Sbjct: 125 NACGIRFKKEERRAAA---ATVNSSTAESNHH-----HHSMFNGSYTNS-STWVPQQLPA 184

Query: 217 ATQKLPCLSAAAINNESMFIGNDDVRRTEQENGISYLSWRLNV--TDHRPSLVHDFTR 266
            TQK PCLSAA        IGNDDV     ENGIS+LSWRLNV  TDHRP+LVHDFTR
Sbjct: 185 TTQKHPCLSAA--------IGNDDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 222

[Close]
BLAST of CmoCh04G008070 vs. NCBI nr
Match: XP_022942846.1 (GATA transcription factor 19-like [Cucurbita moschata])

HSP 1 Score: 537.0 bits (1382), Expect = 9.5e-149
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0 

Query: 1   MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60
           MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL
Sbjct: 1   MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120
           GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD
Sbjct: 61  GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120

Query: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN 180
           PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN
Sbjct: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN 180

Query: 181 HHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQE 240
           HHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQE
Sbjct: 181 HHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQE 240

Query: 241 NGISYLSWRLNVTDHRPSLVHDFTR 266
           NGISYLSWRLNVTDHRPSLVHDFTR
Sbjct: 241 NGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]
BLAST of CmoCh04G008070 vs. NCBI nr
Match: KAG6600583.1 (GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031223.1 GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 527.3 bits (1357), Expect = 7.5e-146
Identity = 262/265 (98.87%), Postives = 262/265 (98.87%), Query Frame = 0 

Query: 1   MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60
           MMHHCG GAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYA SSSSSSSSPSSVDCTLSL
Sbjct: 1   MMHHCGAGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYA-SSSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120
           GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD
Sbjct: 61  GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120

Query: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN 180
           PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN
Sbjct: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN 180

Query: 181 HHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQE 240
           HHHLHQHHQMFNGNYTNSTA WVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQE
Sbjct: 181 HHHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQE 240

Query: 241 NGISYLSWRLNVTDHRPSLVHDFTR 266
           NGISYLSWRLNVTDHRPSLVHDFTR
Sbjct: 241 NGISYLSWRLNVTDHRPSLVHDFTR 264

[Close]
BLAST of CmoCh04G008070 vs. NCBI nr
Match: XP_023533953.1 (GATA transcription factor 19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 517.7 bits (1332), Expect = 5.9e-143
Identity = 259/265 (97.74%), Postives = 259/265 (97.74%), Query Frame = 0 

Query: 1   MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60
           MMHHC GGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYA  SSSSSSSPSSVDCTLSL
Sbjct: 1   MMHHC-GGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYA--SSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120
           GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPS GD
Sbjct: 61  GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSSGD 120

Query: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN 180
           PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTAT MAAESNN
Sbjct: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATTMAAESNN 180

Query: 181 HHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQE 240
           HHHLHQHHQMFNGNYTNSTA WVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQE
Sbjct: 181 HHHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQE 240

Query: 241 NGISYLSWRLNVTDHRPSLVHDFTR 266
           NGISYLSWRLNVTDHRPSLVHDFTR
Sbjct: 241 NGISYLSWRLNVTDHRPSLVHDFTR 262

[Close]
BLAST of CmoCh04G008070 vs. NCBI nr
Match: XP_022982306.1 (GATA transcription factor 19-like [Cucurbita maxima])

HSP 1 Score: 514.2 bits (1323), Expect = 6.6e-142
Identity = 258/266 (96.99%), Postives = 261/266 (98.12%), Query Frame = 0 

Query: 1   MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60
           MMHHC GGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL
Sbjct: 1   MMHHC-GGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120
           GTPSTRSSEFDSDKRAAPRHHR SAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD
Sbjct: 61  GTPSTRSSEFDSDKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120

Query: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN 180
           PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN
Sbjct: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNN 180

Query: 181 HHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLS-AAAINNESMFIGNDDVRRTEQ 240
           HHH HQHHQMF+GNYTNS+A WVPHHSPVATQKLPCLS AAAI+NESMFIGNDDVRRTEQ
Sbjct: 181 HHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESMFIGNDDVRRTEQ 240

Query: 241 ENGISYLSWRLNVTDHRPSLVHDFTR 266
           ENGISYLSWRLNVTDHRPSLVHDFTR
Sbjct: 241 ENGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]
BLAST of CmoCh04G008070 vs. NCBI nr
Match: XP_038875549.1 (GATA transcription factor 18-like [Benincasa hispida])

HSP 1 Score: 351.3 bits (900), Expect = 7.4e-93
Identity = 202/272 (74.26%), Postives = 218/272 (80.15%), Query Frame = 0 

Query: 1   MMHHCGGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60
           MMHH GGG GG ASSFSVFLSVPNHG A     D+YS+  +++ +SSSSSPSSVDCTLSL
Sbjct: 1   MMHHYGGG-GGGASSFSVFLSVPNHGAA-----DMYSS--STNYASSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKRAAPR-HHRRSAGSYVSNFCWDLLHPKHKSAGRSTA---SNAAAVP 120
           GTPSTRSSEFD+DKRAA R HHRRSAGSYVSNFCWDLLHPKHK++GR+ A   +  AAV 
Sbjct: 61  GTPSTRSSEFDADKRAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRAAAPPNNLTAAVT 120

Query: 121 SGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR-AAATVNCTATAMA 180
           SG DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR AAATVN T    A
Sbjct: 121 SGADPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNST----A 180

Query: 181 AESNNHHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVR 240
           AESN+HHHLH H  MFNGNYTNS + WVP  SP  +QK PCLSAA        IGND   
Sbjct: 181 AESNHHHHLHHHPIMFNGNYTNS-STWVPQQSPTMSQKHPCLSAA--------IGND--- 240

Query: 241 RTEQENGISYLSWRLNV--TDHRPSLVHDFTR 266
             E ENGIS+LSWRLNV  TDHRP+LVHDFTR
Sbjct: 241 --EPENGISFLSWRLNVANTDHRPTLVHDFTR 246

[Close]
BLAST of CmoCh04G008070 vs. TAIR 10
Match: AT3G50870.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 173.3 bits (438), Expect = 2.6e-43
Identity = 127/282 (45.04%), Postives = 155/282 (54.96%), Query Frame = 0 

Query: 13  ASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDS 72
           A S+S+  S+ N G        ++  N      SS    S VDCTLSLGTPSTR  E D 
Sbjct: 38  AGSYSMVFSMQNGG--------VFEQNGEDYHHSS----SLVDCTLSLGTPSTRLCEEDE 97

Query: 73  DKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASN----AAAVPS----------- 132
            +R   R     A S +SNF WDL+H K+ ++  +  +N    +A  PS           
Sbjct: 98  KRR---RSTSSGASSCISNF-WDLIHTKNNNSKTAPYNNVPSFSANKPSRGCSGGGGGGG 157

Query: 133 ---GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR-AAATVNCTATA 192
              GGD LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR  AAT N    A
Sbjct: 158 GGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGNTVVGA 217

Query: 193 MAAESNNHHH----LHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFI 252
              +++ + H     + +H   N N  N T  W  HHS   TQ++PC   A   NE  F+
Sbjct: 218 APVQTDQYGHHNSGYNNYHAATNNNNNNGT-PWAHHHS---TQRVPCNYPA---NEIRFM 277

Query: 253 GN------DDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 266
            +      ++V       G+ +LSWRLNV D R SLVHDFTR
Sbjct: 278 DDYGSGVANNVESDGAHGGVPFLSWRLNVAD-RASLVHDFTR 295

[Close]
BLAST of CmoCh04G008070 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 153.7 bits (387), Expect = 2.1e-37
Identity = 107/221 (48.42%), Postives = 124/221 (56.11%), Query Frame = 0 

Query: 45  SSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSA 104
           S  SS  +SVDCTLSLGTPSTR    D D+R    H   + G       WD L+   K  
Sbjct: 14  SHHSSPYASVDCTLSLGTPSTRLCNED-DERRFSSHTSDTIG-------WDFLNGSKKGG 73

Query: 105 GRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAA 164
           G            GG  LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA+
Sbjct: 74  G-----------GGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAS 133

Query: 165 ATVNCTATAMAAESNNHHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINN 224
              N T+   +  +      HQ    +  N  N  A+  P H    TQ++P  S A  NN
Sbjct: 134 TARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPWHHQHNTQRVPYYSPA--NN 193

Query: 225 ESMFIGNDDVRRTEQE-NGISYLSWRLNVTDHRPSLVHDFT 265
           E  ++  DDVR  + +     +LSWRLNV D R  LVHDFT
Sbjct: 194 EYSYV--DDVRVVDHDVTTDPFLSWRLNVAD-RTGLVHDFT 210

[Close]
BLAST of CmoCh04G008070 vs. TAIR 10
Match: AT2G18380.1 (GATA transcription factor 20 )

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-25
Identity = 90/216 (41.67%), Postives = 115/216 (53.24%), Query Frame = 0 

Query: 14  SSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSD 73
           S+FS+F S  N     H+  D Y NN++SS        +SVDCTLSLGTPSTR  +    
Sbjct: 8   SNFSMFFSSENDDQNHHN-YDPY-NNFSSS--------TSVDCTLSLGTPSTRLDD---- 67

Query: 74  KRAAPRHHRRSAGSYVSNFCWDL-LHPKHKSAGRSTASNAAAVPSGGDPLLARRCANCDT 133
                 HHR S+ +  +N   D  +H          A  ++    G    L RRCA+CDT
Sbjct: 68  ------HHRFSSAN-SNNISGDFYIH-------GGNAKTSSYKKGGVAHSLPRRCASCDT 127

Query: 134 TSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTAT---AMAAE----------SN 193
           TSTPLWRNGP+GPKSLCNACGIRFKKEERRA A  N T +   + AAE           N
Sbjct: 128 TSTPLWRNGPKGPKSLCNACGIRFKKEERRATAR-NLTISGGGSSAAEVPVENSYNGGGN 187

Query: 194 NHHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLP 216
            + H H H+   + ++ +     VP+ SPV   + P
Sbjct: 188 YYSHHHHHYASSSPSWAHQNTQRVPYFSPVPEMEYP 194

[Close]
BLAST of CmoCh04G008070 vs. TAIR 10
Match: AT4G26150.1 (cytokinin-responsive gata factor 1 )

HSP 1 Score: 72.0 bits (175), Expect = 8.0e-13
Identity = 38/89 (42.70%), Postives = 52/89 (58.43%), Query Frame = 0 

Query: 107 STASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAT 166
           S  SN+       +  + R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A AT
Sbjct: 181 SNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAT 240

Query: 167 VNCTATAMAAESNNHHHLHQHHQMFNGNY 196
              TA +  +       +   +++ NG Y
Sbjct: 241 ATATAVSGVSPPVMKKKMQNKNKISNGVY 269

[Close]
BLAST of CmoCh04G008070 vs. TAIR 10
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 65.1 bits (157), Expect = 9.8e-11
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 0 

Query: 100 KHKSAGRST---ASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRF 159
           K +SAG S+     N ++  SGGD    + C +C T+ TPLWR GP GPKSLCNACGI+ 
Sbjct: 11  KLESAGDSSDVDNGNCSSSGSGGD--TKKTCVDCGTSRTPLWRGGPAGPKSLCNACGIKS 70

Query: 160 KKEERRAAATVNCTATAMAAESNNH 182
           +K +R+AA  +      + ++SNN+
Sbjct: 71  RK-KRQAALGIRQDDIKIKSKSNNN 92

The following BLAST results are available for this feature:
BLAST of CmoCh04G008070 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LC793.6e-4245.04GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2[more]
Q6QPM23.0e-3648.42GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2[more]
B8AX511.8e-2545.15GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE... [more]
Q6L5E51.8e-2545.15GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 ... [more]
Q9ZPX02.0e-2441.67GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2[more]
BLAST of CmoCh04G008070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FQ084.6e-149100.00GATA transcription factor 19-like OS=Cucurbita moschata OX=3662 GN=LOC111447753 ... [more]
A0A6J1IYZ23.2e-14296.99GATA transcription factor 19-like OS=Cucurbita maxima OX=3661 GN=LOC111481178 PE... [more]
A0A0A0KY153.3e-9171.22GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G046650 P... [more]
A0A1S3BSF95.7e-9172.40GATA transcription factor 18-like OS=Cucumis melo OX=3656 GN=LOC103493199 PE=3 S... [more]
A0A5D3CZ787.0e-8174.37GATA transcription factor 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
BLAST of CmoCh04G008070 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022942846.19.5e-149100.00GATA transcription factor 19-like [Cucurbita moschata][more]
KAG6600583.17.5e-14698.87GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. sororia] >K... [more]
XP_023533953.15.9e-14397.74GATA transcription factor 19-like [Cucurbita pepo subsp. pepo][more]
XP_022982306.16.6e-14296.99GATA transcription factor 19-like [Cucurbita maxima][more]
XP_038875549.17.4e-9374.26GATA transcription factor 18-like [Benincasa hispida][more]
BLAST of CmoCh04G008070 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G50870.12.6e-4345.04GATA type zinc finger transcription factor family protein [more]
AT4G36620.12.1e-3748.42GATA transcription factor 19 [more]
AT2G18380.11.4e-2541.67GATA transcription factor 20 [more]
AT4G26150.18.0e-1342.70cytokinin-responsive gata factor 1 [more]
AT4G16141.19.8e-1144.71GATA type zinc finger transcription factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 121..173
e-value: 8.5E-19
score: 78.4
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 127..161
e-value: 6.5E-18
score: 64.0
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 127..152
IPR000679Zinc finger, GATA-typePROSITEPS50114GATA_ZN_FINGER_2coord: 121..157
score: 13.889895
IPR000679Zinc finger, GATA-typeCDDcd00202ZnF_GATAcoord: 126..158
e-value: 1.10367E-13
score: 62.005
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 123..166
e-value: 6.5E-16
score: 59.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..67
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 124..161
IPR044272GATA transcription factor 18/19/20PANTHERPTHR46813GATA TRANSCRIPTION FACTOR 18coord: 11..262

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G008070.1CmoCh04G008070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009908 flower development
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0031969 chloroplast membrane
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding