CmoCh04G008010 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G008010
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPeptidyl-prolyl cis-trans isomerase
LocationCmo_Chr04: 4008984 .. 4011853 (-)
RNA-Seq ExpressionCmoCh04G008010
SyntenyCmoCh04G008010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATACGAGGCTTAGCAAGTATGTTGGCATGGAATCATATTCGGGAAGGAAAGTATATCTTATTAATAGAAGTTGTAACTTAATTCTTCTAAGCATTTTTCAATTATCATACCCTTCGTTCTTATTCGAATGTAATGTTAGTTCATTCATATATTTTTTTTTACTCGAGCGTCACATAACCTTTCAACAAGTTTAATGTAGCGGATATTGTTCATTTTAGCTCGTTATGTACGTATGAGTCTTACAATTTTAAAATGGTTAAGGAAAGATTTCCAAGCTTTTGTAACATCAAGGTAGGATCTCATGATCCACCCATTTTAAGGGACCAATAACCCCGCCAACACACAGAATATTGTACGACTTTCTTTTTCTTTTTATTATGCGTGCCTCTATCATAATAAATATTAATTACTGAAAGGGCTAGATATTTCCCAAGCACTGGAACGGACGGTAGAGATTGGATCACTAGCTGTAACGATCCGCAGTGGAAAAGCCTCTCCGCTTTTCTGGAACTATCTAATAATATATATATTCTCGACTCTCTCGTGCCAAGAGCTCGCCACTGTCTGCACCAATCTAAGTGAAAGGAAAAAGCGAGGGCCGCGCCACCGTTTCTATCACCGGCTGCCAAGATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTCTTCGATCTCCTCTGCAGATCGATCTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAGAACAAGATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTTATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAGGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCGCATACTGATCTCATATCTTTATTATCTTGATTTTTCTGGCCATTACGTAGAGTAATTGTTTCTTTTTGTTTGCCATTTCTGGTCGGATTTGTGTAGTTTTCAGTCCGGAATTAGATAGGATTCACTTTATCATGAATTGAACCTGGAACCCTAGACTTAACCGTGAGGGATCTTAGTGTTTGGATTGCGGTATTGCTAGTTCGAGATATTAGATTTAGGTTTTAGTTCAATGAATTTTATTTACAGGGAGGATATCTATGTATCGCTTGGATTCAATTGGAGATGTGTGTCTATTGTATTTACTTATTTGCTTCGTGTAAGATTTGGAATTCTTCTTGTTTTGGTTTGAATTGAAATAGTACAGGATACTATCGTGTATGATTATTCCCTGCCGCTCTCGGATACCAAACATAATTTGTTGAATTGTGGTCTATGATTGAGGAACTTTGTTATACCTCAATTTCTAAGTTGAATTTCACTTTATGAAAAAACTATAATGATAATGCTCAAACAATTATCACAAGGTCGTGATTACTTTTGGACTTTGCGATGAAGTTGTGTGATACCGTGATGAATATAACCATTTATGTTTGACCATTTTACTTGAAAACCGATGAAAGGATTACTTACTCAGTACTTGATTTTAGCTAAATGGTTAAATCAACCATTCAATCGGAATATCCGTTTAGAGCCTCTCATATATTGGTAAAAAGTGAGAACATCAACACTTTGAAAGTGTCGCTATCAAGAAAATTTCTACCTGCTGGTGTGGAGACTTTTTTGCTCCAGTAAATACTTTAGATTTAATAATTCCATGAGATCTAGGAACTTAGCTTTGGAAATCAAAGGGAGAGGTGGAGATGTAGCAATAGTTTTACTTGTTAGTAATATTTCACTATAATCTGGTATAATCAGACCCACACATCAAAAGAATTAAAACAACAAAATTTGAACAACCCTTTCTGGTAAAATTGGTTCTATCTAGGATTGCAGTTCTCTTTTCCCCCACTGAAATGTATACTTCGTTAGTGTAGATGGAGCCATAATTTTTCATGGGGAGAGGCGAACTCTTAGCTTCCAACTTTTCATTATATGAAATAAATTTCCAATTCTAAACATGTAGAGAAAATTTGAGAGAAAAATTATAAATCGAACTTTGTATACAACTTTTTAAATCTAAAATGAACCCAGCCCTCCTCTTTCTGCTCCACCCCTGGTTGTCTCTTGCTAGAAATTTGTAGTTGTGTACTCTCCTTCCAAGCCCGATTAGTAAAATCCCAGAGAGTAATTGTGTTCGGTAGTTCAATAGCAGGTACATTTGGACATTTTCTAGGATCACAAGGATATGTTATGATATTTTGTTCGTAAGCAAGCTGATATTTTATTCTAGCAATTGTTTTTGTGTGGATTAGCACAATGTAGAATGCGTCTAAATGAGCAACACACTGACGTTATTGCAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAAATTCTCTCATAAATCCTCCTTATTGAAGCATTTAATCTATTTGGCTGAAGTTATTCGAGAAGGATTTGGTTCTACTCCAGGCGACACGAATTTGTTGCTATGCTCTTGATAGTACAGGACAATTCATGTTGTGATTTGGCTATAGCTACTCTGTTTCAGTGACCTAAGAATTTTCTTGAAGTTCGATGCTTTTATGCCATTGAATTTTTGGCTCTGTAAACGTGACAGATATTTGCGTTCAAGTGGTTGTGATTTGAATTGTTTGCGTCTTTTATTACGCCTCATTTGTCTGCTCAACCTCCTAGG

mRNA sequence

ATGGATACGAGGCTTAGCAAGTATGTTGGCATGGAATCATATTCGGGAAGGAAAGAAAAAGCGAGGGCCGCGCCACCGTTTCTATCACCGGCTGCCAAGATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTCTTCGATCTCCTCTGCAGATCGATCTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAGAACAAGATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTTATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAGGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAAATTCTCTCATAAATCCTCCTTATTGAAGCATTTAATCTATTTGGCTGAAGTTATTCGAGAAGGATTTGGTTCTACTCCAGGCGACACGAATTTGTTGCTATGCTCTTGATAGTACAGGACAATTCATGTTGTGATTTGGCTATAGCTACTCTGTTTCAGTGACCTAAGAATTTTCTTGAAGTTCGATGCTTTTATGCCATTGAATTTTTGGCTCTGTAAACGTGACAGATATTTGCGTTCAAGTGGTTGTGATTTGAATTGTTTGCGTCTTTTATTACGCCTCATTTGTCTGCTCAACCTCCTAGG

Coding sequence (CDS)

ATGGATACGAGGCTTAGCAAGTATGTTGGCATGGAATCATATTCGGGAAGGAAAGAAAAAGCGAGGGCCGCGCCACCGTTTCTATCACCGGCTGCCAAGATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTCTTCGATCTCCTCTGCAGATCGATCTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAGAACAAGATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTTATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAGGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAA

Protein sequence

MDTRLSKYVGMESYSGRKEKARAAPPFLSPAAKIDSDRKRKKSASSISSADRSAKEKRSSSKKNKMSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA
Homology
[Close]
BLAST of CmoCh04G008010 vs. ExPASy Swiss-Prot
Match: Q94G00 (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica OX=3750 GN=PIN1 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.7e-52
Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = 0 

Query: 68  SSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKF 127
           SS+A  QVRASHILIKHQGSRR ASWKDPEG+II+NTTRDSAVSQL  +RDDI+SGK+KF
Sbjct: 2   SSSAGNQVRASHILIKHQGSRRKASWKDPEGQIIRNTTRDSAVSQLKALRDDILSGKAKF 61

Query: 128 EDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 187
           +D+A+R SDCSSAKRGGDLGPFGR QMQKPFEEATFALKVGE+SDIVDTDSGVHIIKRT
Sbjct: 62  DDLAARYSDCSSAKRGGDLGPFGRNQMQKPFEEATFALKVGEMSDIVDTDSGVHIIKRT 120

[Close]
BLAST of CmoCh04G008010 vs. ExPASy Swiss-Prot
Match: Q9SL42 (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana OX=3702 GN=PIN1 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.1e-48
Identity = 94/118 (79.66%), Postives = 108/118 (91.53%), Query Frame = 0 

Query: 70  AAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFED 129
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTR++AV QL  IR+DI+SGK+ FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 130 VASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 188
           VA+R+SDCSSAKRGGDLG FGRGQMQKPFEEAT+ALKVG++SDIVDTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]
BLAST of CmoCh04G008010 vs. ExPASy Swiss-Prot
Match: Q9LEK8 (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata OX=49450 GN=PARV12.8 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.7e-44
Identity = 88/113 (77.88%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 74  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASR 133
           +VRASHILIKHQGSRR +SWKDP+G +I  TTRD AVSQL  +R +++S  + F D+ASR
Sbjct: 5   KVRASHILIKHQGSRRKSSWKDPDGSLISATTRDDAVSQLQSLRQELLSDPASFSDLASR 64

Query: 134 ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 187
            S CSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKRT
Sbjct: 65  HSHCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRT 117

[Close]
BLAST of CmoCh04G008010 vs. ExPASy Swiss-Prot
Match: P0C1J8 (Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=pin1 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25
Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 0 

Query: 74  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASR 133
           +VRASH+LIK + SRRP+SW++         +++ A+  LT  +  I SG+     +A+ 
Sbjct: 41  RVRASHLLIKSRESRRPSSWREEH----ITRSKEEALKILTDFQHKIESGQETLSALATN 100

Query: 134 ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 188
            SDC+SAKRGGDLG F RGQMQKPFEEATFAL+VGE+S  V TDSGVH+I RTA
Sbjct: 101 YSDCTSAKRGGDLGYFERGQMQKPFEEATFALQVGELSKPVWTDSGVHLILRTA 150

[Close]
BLAST of CmoCh04G008010 vs. ExPASy Swiss-Prot
Match: P54353 (Putative peptidyl-prolyl cis-trans isomerase dodo OS=Drosophila melanogaster OX=7227 GN=dod PE=2 SV=3)

HSP 1 Score: 116.7 bits (291), Expect = 2.8e-25
Identity = 61/117 (52.14%), Postives = 82/117 (70.09%), Query Frame = 0 

Query: 71  AAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDV 130
           A  +V   H+L+KH+GSRRP+SW+  E  I +  T++ A   L V R+ I+  ++ F+++
Sbjct: 54  APDEVHCLHLLVKHKGSRRPSSWR--EANITR--TKEEAQLLLEVYRNKIVQQEATFDEL 113

Query: 131 ASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 188
           A   SDCSSAKRGGDLG FGRGQMQ  FE+A F L V ++S IVD+DSG+HII R A
Sbjct: 114 ARSYSDCSSAKRGGDLGKFGRGQMQAAFEDAAFKLNVNQLSGIVDSDSGLHIILRKA 166

[Close]
BLAST of CmoCh04G008010 vs. ExPASy TrEMBL
Match: A0A6J1J7P6 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111482022 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 5.3e-59
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 66  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 125
           MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60

Query: 126 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 185
           KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 186 TA 188
           TA
Sbjct: 121 TA 122

[Close]
BLAST of CmoCh04G008010 vs. ExPASy TrEMBL
Match: A0A6J1FQL7 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111447892 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 5.3e-59
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 66  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 125
           MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60

Query: 126 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 185
           KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 186 TA 188
           TA
Sbjct: 121 TA 122

[Close]
BLAST of CmoCh04G008010 vs. ExPASy TrEMBL
Match: A0A6J1J909 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111482843 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 7.6e-58
Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0 

Query: 66  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 125
           MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIRDDIISGKS
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKS 60

Query: 126 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 185
           KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 186 TA 188
            A
Sbjct: 121 IA 122

[Close]
BLAST of CmoCh04G008010 vs. ExPASy TrEMBL
Match: A0A6J1ES02 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111435987 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 6.5e-57
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 66  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 125
           MSSSAA GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIR+DIISGKS
Sbjct: 1   MSSSAAVGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIREDIISGKS 60

Query: 126 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 185
           KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 186 TA 188
            A
Sbjct: 121 IA 122

[Close]
BLAST of CmoCh04G008010 vs. ExPASy TrEMBL
Match: A0A5A7TSF6 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004880 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.4e-56
Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 66  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 125
           MSSSA  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIRDDIISGK+
Sbjct: 1   MSSSAPTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKA 60

Query: 126 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 185
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKR 120

Query: 186 TA 188
           TA
Sbjct: 121 TA 122

[Close]
BLAST of CmoCh04G008010 vs. NCBI nr
Match: KAG6577212.1 (Peptidyl-prolyl cis-trans isomerase Pin1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015303.1 Peptidyl-prolyl cis-trans isomerase Pin1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298.5 bits (763), Expect = 4.0e-77
Identity = 162/170 (95.29%), Postives = 166/170 (97.65%), Query Frame = 0 

Query: 18  KEKARAAPPFLSPAAKIDSDRKRKKSASSISSADRSAKEKRSSSKKNKMSSSAAAGQVRA 77
           KEKARAAPP +S AAKIDSDRKRKKSASSISSADR+AKEKRSSSKKNKMSSSAA GQVRA
Sbjct: 54  KEKARAAPPLVSQAAKIDSDRKRKKSASSISSADRTAKEKRSSSKKNKMSSSAAVGQVRA 113

Query: 78  SHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASRISDC 137
           SHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIR+DIISGKSKFEDVASRISDC
Sbjct: 114 SHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIREDIISGKSKFEDVASRISDC 173

Query: 138 SSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 188
           SSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR A
Sbjct: 174 SSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRIA 223

[Close]
BLAST of CmoCh04G008010 vs. NCBI nr
Match: XP_022943036.1 (peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita moschata] >XP_022983413.1 peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita maxima] >XP_023516756.1 peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita pepo subsp. pepo] >KAG6600578.1 Peptidyl-prolyl cis-trans isomerase Pin1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031218.1 Peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 237.3 bits (604), Expect = 1.1e-58
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 66  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 125
           MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60

Query: 126 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 185
           KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 186 TA 188
           TA
Sbjct: 121 TA 122

[Close]
BLAST of CmoCh04G008010 vs. NCBI nr
Match: XP_022984600.1 (peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita maxima] >XP_023552613.1 peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.4 bits (594), Expect = 1.6e-57
Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0 

Query: 66  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 125
           MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIRDDIISGKS
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKS 60

Query: 126 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 185
           KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 186 TA 188
            A
Sbjct: 121 IA 122

[Close]
BLAST of CmoCh04G008010 vs. NCBI nr
Match: XP_038878149.1 (peptidyl-prolyl cis-trans isomerase Pin1 [Benincasa hispida])

HSP 1 Score: 231.5 bits (589), Expect = 6.0e-57
Identity = 118/122 (96.72%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 66  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 125
           MSSSAA GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLT IRDDIISGK 
Sbjct: 1   MSSSAATGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTAIRDDIISGKF 60

Query: 126 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 185
           KFED+ASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 186 TA 188
           TA
Sbjct: 121 TA 122

[Close]
BLAST of CmoCh04G008010 vs. NCBI nr
Match: XP_022929403.1 (peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita moschata])

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-56
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 66  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 125
           MSSSAA GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIR+DIISGKS
Sbjct: 1   MSSSAAVGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIREDIISGKS 60

Query: 126 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 185
           KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 186 TA 188
            A
Sbjct: 121 IA 122

[Close]
BLAST of CmoCh04G008010 vs. TAIR 10
Match: AT2G18040.1 (peptidylprolyl cis/trans isomerase, NIMA-interacting 1 )

HSP 1 Score: 193.0 bits (489), Expect = 2.2e-49
Identity = 94/118 (79.66%), Postives = 108/118 (91.53%), Query Frame = 0 

Query: 70  AAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFED 129
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTR++AV QL  IR+DI+SGK+ FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 130 VASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 188
           VA+R+SDCSSAKRGGDLG FGRGQMQKPFEEAT+ALKVG++SDIVDTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]
BLAST of CmoCh04G008010 vs. TAIR 10
Match: AT1G26550.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-04
Identity = 43/149 (28.86%), Postives = 60/149 (40.27%), Query Frame = 0 

Query: 39  KRKKSASSISSADRSAKEKRSSSKKNKMSSSA----AAGQVRASHILIKHQGSRRPASWK 98
           K  K+         S  E+  S  K K   +A        V+A H+L + QG    A  K
Sbjct: 3   KDAKAGGKGKGKQASGSEEAPSKGKGKAGKAADGLGTCTYVKARHVLCEKQGKINEAYKK 62

Query: 99  DPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASRISDCSSAKRGGDLGPFGRGQM 158
             +G +        A                +F  +A+  S+C S K+GGDLG F RG+M
Sbjct: 63  LQDGWLSNGDKVPPA----------------EFAKIAAEYSECPSGKKGGDLGWFPRGKM 122

Query: 159 QKPFEEATFALKVGEVSDIVDTDSGVHII 184
             PF++  F   VG  S    +  G HII
Sbjct: 123 AGPFQDVAFNTPVGVTSAPFKSTHGYHII 135

The following BLAST results are available for this feature:
BLAST of CmoCh04G008010 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94G002.7e-5285.71Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica OX=3750 GN=PIN1 PE=2... [more]
Q9SL423.1e-4879.66Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana OX=3702 GN=PIN1... [more]
Q9LEK82.7e-4477.88Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata OX=49450 GN=PARV12.... [more]
P0C1J81.3e-2556.14Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 /... [more]
P543532.8e-2552.14Putative peptidyl-prolyl cis-trans isomerase dodo OS=Drosophila melanogaster OX=... [more]
BLAST of CmoCh04G008010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J7P65.3e-59100.00Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111482022 ... [more]
A0A6J1FQL75.3e-59100.00Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC11144789... [more]
A0A6J1J9097.6e-5898.36Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111482843 ... [more]
A0A6J1ES026.5e-5796.72Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC11143598... [more]
A0A5A7TSF61.4e-5694.26Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
BLAST of CmoCh04G008010 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6577212.14.0e-7795.29Peptidyl-prolyl cis-trans isomerase Pin1, partial [Cucurbita argyrosperma subsp.... [more]
XP_022943036.11.1e-58100.00peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita moschata] >XP_022983413.1 pe... [more]
XP_022984600.11.6e-5798.36peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita maxima] >XP_023552613.1... [more]
XP_038878149.16.0e-5796.72peptidyl-prolyl cis-trans isomerase Pin1 [Benincasa hispida][more]
XP_022929403.11.3e-5696.72peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita moschata][more]
BLAST of CmoCh04G008010 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G18040.12.2e-4979.66peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [more]
AT1G26550.11.7e-0428.86FKBP-like peptidyl-prolyl cis-trans isomerase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePFAMPF00639Rotamasecoord: 79..186
e-value: 3.1E-23
score: 82.5
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROSITEPS50198PPIC_PPIASE_2coord: 72..187
score: 28.402491
NoneNo IPR availableGENE3D3.10.50.40coord: 69..187
e-value: 2.1E-39
score: 136.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..100
NoneNo IPR availablePANTHERPTHR10657PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 67..187
NoneNo IPR availablePANTHERPTHR10657:SF4PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATEDcoord: 67..187
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 72..186
IPR023058Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved sitePROSITEPS01096PPIC_PPIASE_1coord: 127..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G008010.1CmoCh04G008010.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000413 protein peptidyl-prolyl isomerization
cellular_component GO:0005829 cytosol
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0016757 glycosyltransferase activity
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity