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CmoCh04G007990 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CGCTTGGTTGCATCGGAGCTTTCACCGATCGGAAGCCATCTCCGAGAGTAAAGCGACATGGGTGCTTCGGAATCCTCACTCTCAAGCTCTCAGAAAGCGGTATTGCTTAGTTTTTGCATAATCTCTTTGCATTGCTCACTTATTTCCCATCTTAATATGTTCTGTTACGACTGAAGCGGCCAGCTGATGTAATCTCCACCGTCTCGGAGCGGTCAGAAGCTGTTGACCCCATATTAGAGAGGCTCAAATCCCTTAAAATCGTAAGTTCAATTATGAAAGTTCTTCAATTTCCCTTTTTGTATGACAGCTAGGGATTCGTTACACCTCACTTCTGTGAATTGTCAAACTTGCATCTGGATTTAGAATTTCATTTGGTTTATTTCGTATTGTAGACAACACCGATATTGCAATCACCCCCTACGGAAGGTAGCCTGACAGATATCTTAGTAAGGAAACCGCCCTCTTCTTCAAATGCTGGTAGGATTCTTAGGATTGAACTTATTGTTTGTTTAGTTTCCTTCTTGGATTAAAATTGGTTCTGTTGGGTAATTTCGTTTTAAACCACGCTTTGTGCTGCCCTAGCCAGCGGTATAACATAAGGCTCAGAAGGGAGGTACAGGAGAAACACGGTTAAGTATTTCAAGCATAACCGCTTAAATTATTGTGATAATCAGTCTCTACACTACCGGCTATAACATTTACCTTTGGCTAAATAGTAATTGGTGATTATGAACTTGGTTGTTTCTGAACGGGTAAGAATAATAAGCATACACCGGTTACCATAGAATTGTGTAAGCGTCAGTATCACTTCCAGTTCCGCTGTTATAATAATAACTCAAGAATCTCTGTTCAACCTGCCAGTACTCTGTTCCTCAATATATTGATCACTTATGAAGCATAGTGTCACATGGTCAAAACTAAACACCCTTGTAACACATAGACCCTTTAAGTTGACCAATGCGTCCATGTCTTATTTGGTTGGACACTTGTTAAGAACAATATACACATGCCAAAAACTAGTTGAACAAATTGAATGCATGTTTTGAACAGTTGTTAAGCAAAATAAACGTATGAACATTCTGGAAGCGAAAGACATATTAGTGTATAAGCATTATTCACTTCAAATCTCTCTTTCATTAAGATATGAGAAGATTTAGAAAGTGGATAAGTTGGTTTAAATCTATCTTGAATATTTGTTTCATGAAACATTTCTTCGTAAATGCACAAGCATTAAAAAGAAAAAACCATTTTTTAGCATGAGAATTAAAATGTGTAAAAAGAATATATGTATATTTTAAAAATGTATATCATAATGTACATATCCTTATTATGTTCATGTTCTAGATTTTTTTTATTTTAAATTAATGTGTCACTGTGTTTGTGTCTTATTTGTGTAAGTGCTTATTAGCTGATCAGTATCTACCCTTGGGATGCATGGATTGGTAATGAGGTCTCTAGATGTAGACGAACATTTGAACTAAAAGCTTTTGGAAAATATGTTCATTTTCTATATTGGGGTTGGTAAACTAATTTGGAAAAGAAGAGTGTACCACTTACTTCTGTAACTTTTAACTGTTTGTACAATATTGATCATGCAGCCTTAATCCAAGTTGGGAAAACGTTCATATTTTATCCAAGTATGAGCCTGCAATCATTTGTTAATTTTTTAGTTTAAGTAAATGAAAAAAAAATATATATAGTTTAGGTAAATGAAGAAACCATTTTGCTAATTTAGGCTTCTTTCCAGTGTTATGGTTTTCGTCATTGTAGCATGGATGTTGAGATTATTGAGTCTATTGCCTAGTTTGCTCTCTTTATCATATTGTAACCTTTTCTGTGTCATGTTATGCCATTGCAATATTTTTGCAAAGGATGCTGCGTGACTGTTCTATTCTTTCTCAATGCAATGTAGTTACCGTGAATCCCCAAGTGCTTTTGGAGCTCTTCTCAGTGTACCGTAATTGGCAGGATGAACGGGTCCAAAAGATCAACAAGAATCAGGTTTGTTCTGTTAAAAAATATTTTGATTTTTTATGGTGAATGCAAATGCTTGTGAGTTATTACATCATTCAGTTCCTTTTATTTCTGTCTACGAAAGATGCCGCTGTTGTGGTTTTATGTTTTTTCTGCTTTAGATTTTATCTAGAGCTCCCTTTAACAAGTAGAATATACTGCCCTCATGATAGAGTTTAAAGGGGCTATGGTTTCCATATTCTTTTTTTATTTCTTTACATGAGTGTGGAGATTTGAACTTGAACTTTTGACCTTTAGATTTAGGATACAATGCCTTAATTAGTCGAGCTATGCTCAGTTTGATAACGTTTTTAATAAATATTTCAGTATCCTCATCAGCTTTTGCCTGTCAAGGGATTCTTTTTTGCCTTGGTCAAAAGGAAAAAAAGGAAGTTGGTTCTTAAGTCGCTAATTTCTTGTACTTATCTTTCTCTTTCAATATCTCATCCTGCTCATGGTAGGACTATGCCCTATCCTATTTAGGTGATTTCGGGGGTTAAAATTCTTAAGGTCACTTTTAGCTGGTTATTCAGGGGCAAGTCAATTCTGGATTTATTCAGACGAGGTTTGCTACCATGTCTCTCCAACGTTGGTAGTGTTTTTTTATTTATTATTATTATTTTTCGTCTAGCCTCTTAGGACTTAGCATCATCTATATATATTAATGAGAAATGAGAAACCAACTTTTCATTGAGAAAACGGAAAGAAAAAATAGTCCAACAAAAGGAACTCCGATAAAAACTACAAAAAAAAGTCCAATCCATCAAAATATGACCCAGCCGACAATTATAAAAACCCATAGTGATAGAAGCCCACAAAGAAGATTAGCATCATATTTTTTGTTTTTTTTTTTGTTATCTTGGTCTATTTGGATACGTATTTCAATTAGCATTATCTGTAATGTTATAGATCTGAAGTGCAATGATTTTTTGGCCTTGACGTCGGTAGAGTTCCCTTTTTCTGGGAGAAAGGGATGAGTTTCTGTAAAATGGTCGTATTAGCTTCAGTATGGAGTACTTGGTTGGACTACAACAGGAATTTTTTTATGATAGATCTGGGATATTTTTGAGATGCGTATTGGAAGTCTGAACCTCTTTGAATCAATTCTAAGATTTCTATATGAATTTTCGAAGTTTTGAATTTTGATGGTATAAATGTTGGGGCCCTGGGGGGCTTACATGTCAATGGGATGGTTGCAGGTATTTATTTCTCTAAAGGGGGACCTTTCTGATGCTTTTGCACCGCTTCCTTTCAGTCACATCTAGTACCTCCATTTTCACATTCCTAGATGAAAGTTTTGGTTTACCATTTACAATTTTTTTTTTTTAAAGAAAAAGAATAAATCTAAACTCTGATGTAATACTTTCTTTTTACTTAATTCTTTTATATTGAAGGCAAGGATGGAAAATCTTTTGGGTTTTGAAAATTAAGCCTATTAATATTTACTTCCATCTAAATTTTCTTGTTTTGTAATCTAACAATTTGAAATTTGATTAAAAGGTTTTCTTGAAAAAAAAAAACATGAAACTCATTGTAACCAATTGGTTATCAAATAGGATTTAATAAACTATTGGAATTTCCACTTACAACTTTTTGTATTGATATTACGGTACTTCACCTGATCAGAAAACCCTATTGTTCTTTAGTATTTATCACACTTGGAATGTTGTTGCAGCCTTAGTGTAGGGTTCTTCCAGTAGAAGAATAGGAAAGATTGTTGTCCATGGAACTTAATTTGGTGATAATTATTGTAGGAAGATATCGAAAACAAGATTGAAGTCACAGATGCTTTGGCTGTTAAACTTCTTCAACGCTTAAATTTTTCGGTTTCTGCAGTGAAAACAGCTTCCGAACATCTATCCGAAGGTACCGATACACATAGTTTTTCTTCCTCTCTTTCTCTGTTTCCTTCCTTTTCTTTTTCTTCTCAACAGATGGGTTTGTGAATGCTTGTGTTTTGCGAACTAAATGTACTGGTTGTACTATTGTCTGTCTTTGGATATGTGTAGTTCACGCACTGAAAGTGGAAATTGGTGAGCTTAAGGGAAGATTGACAGAAGTTATTAGTAATTGCGATGCAATATGCAAAAGAATTTCTTCAGAAGGACCAGAGTCTCTTCGGTTATCTATCAAGCCATTTGTTGTTGCCACCACCGACTCGGGGTCGTCCTGTAATTCATCTTCTCAGCAAGTAGATTTGAATACAAATCCACATCCCCAAGAACCCAAATTAGGTTGA CGCTTGGTTGCATCGGAGCTTTCACCGATCGGAAGCCATCTCCGAGAGTAAAGCGACATGGGTGCTTCGGAATCCTCACTCTCAAGCTCTCAGAAAGCGCGGCCAGCTGATGTAATCTCCACCGTCTCGGAGCGGTCAGAAGCTGTTGACCCCATATTAGAGAGGCTCAAATCCCTTAAAATCACAACACCGATATTGCAATCACCCCCTACGGAAGGTAGCCTGACAGATATCTTAGTAAGGAAACCGCCCTCTTCTTCAAATGCTGTTACCGTGAATCCCCAAGTGCTTTTGGAGCTCTTCTCAGTGTACCGTAATTGGCAGGATGAACGGGTCCAAAAGATCAACAAGAATCAGGAAGATATCGAAAACAAGATTGAAGTCACAGATGCTTTGGCTGTTAAACTTCTTCAACGCTTAAATTTTTCGGTTTCTGCAGTGAAAACAGCTTCCGAACATCTATCCGAAGATGGGTTTGTGAATGCTTGTGTTTTGCGAACTAAATGTACTGGTTGTACTATTGTCTGTCTTTGGATATGTGTAGTTCACGCACTGAAAGTGGAAATTGGTGAGCTTAAGGGAAGATTGACAGAAGTTATTAGTAATTGCGATGCAATATGCAAAAGAATTTCTTCAGAAGGACCAGAGTCTCTTCGGTTATCTATCAAGCCATTTGTTGTTGCCACCACCGACTCGGGGTCGTCCTGTAATTCATCTTCTCAGCAAGTAGATTTGAATACAAATCCACATCCCCAAGAACCCAAATTAGGTTGA ATGGGTGCTTCGGAATCCTCACTCTCAAGCTCTCAGAAAGCGCGGCCAGCTGATGTAATCTCCACCGTCTCGGAGCGGTCAGAAGCTGTTGACCCCATATTAGAGAGGCTCAAATCCCTTAAAATCACAACACCGATATTGCAATCACCCCCTACGGAAGGTAGCCTGACAGATATCTTAGTAAGGAAACCGCCCTCTTCTTCAAATGCTGTTACCGTGAATCCCCAAGTGCTTTTGGAGCTCTTCTCAGTGTACCGTAATTGGCAGGATGAACGGGTCCAAAAGATCAACAAGAATCAGGAAGATATCGAAAACAAGATTGAAGTCACAGATGCTTTGGCTGTTAAACTTCTTCAACGCTTAAATTTTTCGGTTTCTGCAGTGAAAACAGCTTCCGAACATCTATCCGAAGATGGGTTTGTGAATGCTTGTGTTTTGCGAACTAAATGTACTGGTTGTACTATTGTCTGTCTTTGGATATGTGTAGTTCACGCACTGAAAGTGGAAATTGGTGAGCTTAAGGGAAGATTGACAGAAGTTATTAGTAATTGCGATGCAATATGCAAAAGAATTTCTTCAGAAGGACCAGAGTCTCTTCGGTTATCTATCAAGCCATTTGTTGTTGCCACCACCGACTCGGGGTCGTCCTGTAATTCATCTTCTCAGCAAGTAGATTTGAATACAAATCCACATCCCCAAGAACCCAAATTAGGTTGA MGASESSLSSSQKARPADVISTVSERSEAVDPILERLKSLKITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSVYRNWQDERVQKINKNQEDIENKIEVTDALAVKLLQRLNFSVSAVKTASEHLSEDGFVNACVLRTKCTGCTIVCLWICVVHALKVEIGELKGRLTEVISNCDAICKRISSEGPESLRLSIKPFVVATTDSGSSCNSSSQQVDLNTNPHPQEPKLG Homology
BLAST of CmoCh04G007990 vs. ExPASy TrEMBL
Match: A0A6J1FVK8 (uncharacterized protein LOC111447685 OS=Cucurbita moschata OX=3662 GN=LOC111447685 PE=4 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 6.9e-104 Identity = 213/238 (89.50%), Postives = 213/238 (89.50%), Query Frame = 0
BLAST of CmoCh04G007990 vs. ExPASy TrEMBL
Match: A0A6J1J3L4 (uncharacterized protein LOC111481498 OS=Cucurbita maxima OX=3661 GN=LOC111481498 PE=4 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.5e-103 Identity = 212/238 (89.08%), Postives = 213/238 (89.50%), Query Frame = 0
BLAST of CmoCh04G007990 vs. ExPASy TrEMBL
Match: A0A5D3CYS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004860 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 2.5e-90 Identity = 186/237 (78.48%), Postives = 203/237 (85.65%), Query Frame = 0
BLAST of CmoCh04G007990 vs. ExPASy TrEMBL
Match: A0A1S3BSD9 (uncharacterized protein LOC103493183 OS=Cucumis melo OX=3656 GN=LOC103493183 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 2.5e-90 Identity = 186/237 (78.48%), Postives = 203/237 (85.65%), Query Frame = 0
BLAST of CmoCh04G007990 vs. ExPASy TrEMBL
Match: A0A0A0KUT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046800 PE=4 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89 Identity = 185/237 (78.06%), Postives = 201/237 (84.81%), Query Frame = 0
BLAST of CmoCh04G007990 vs. NCBI nr
Match: XP_022942738.1 (uncharacterized protein LOC111447685 [Cucurbita moschata]) HSP 1 Score: 386.7 bits (992), Expect = 1.4e-103 Identity = 213/238 (89.50%), Postives = 213/238 (89.50%), Query Frame = 0
BLAST of CmoCh04G007990 vs. NCBI nr
Match: XP_022982715.1 (uncharacterized protein LOC111481498 [Cucurbita maxima]) HSP 1 Score: 385.6 bits (989), Expect = 3.2e-103 Identity = 212/238 (89.08%), Postives = 213/238 (89.50%), Query Frame = 0
BLAST of CmoCh04G007990 vs. NCBI nr
Match: KAG7031216.1 (hypothetical protein SDJN02_05256 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 382.9 bits (982), Expect = 2.0e-102 Identity = 211/238 (88.66%), Postives = 212/238 (89.08%), Query Frame = 0
BLAST of CmoCh04G007990 vs. NCBI nr
Match: XP_023548268.1 (uncharacterized protein LOC111806950 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 380.6 bits (976), Expect = 1.0e-101 Identity = 210/238 (88.24%), Postives = 211/238 (88.66%), Query Frame = 0
BLAST of CmoCh04G007990 vs. NCBI nr
Match: KAG6600576.1 (hypothetical protein SDJN03_05809, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101 Identity = 210/238 (88.24%), Postives = 211/238 (88.66%), Query Frame = 0
BLAST of CmoCh04G007990 vs. TAIR 10
Match: AT5G66290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 231.9 bits (590), Expect = 5.4e-61 Identity = 128/215 (59.53%), Postives = 159/215 (73.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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