CmoCh04G007960 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTCAGAAAGCAGGGTTTAGTGGTTCGGTAGCGCACTTCGAAAGCTCTAGGTCAGCGTCTTCCCTCTCCCTTCAGCTCAGCATGTGCGATCGACCCAACTGAAGCTTTTGCTTATCGGACCGCCGTGCATTTTCGCCCATGAGGTTTTGAGCTTCATTTCATTTCGTGTGTTTTTTGAGGTTGATTTTGGGTGGATGGTGAACCAAGCGAATTTTATCAATTGAGGTTCTGCTGGAATTTACTATTGTTTCGTCATGCATCGCATAATTTTGCTCTTTTGTACTCTAAAAATTAGTTAACCTTCACTGCGGCATTTCCTTTGATTGGTTGAATGGGTTTAGCTCTCTTAACTCCACTCTATAGCTCACATGTTGAACCCTGAAAGTGGAATGAATGTTCTAGAAAAATTTGATTGCGGGTTGAAAGTTTTATCCAAATGGGCTGCGAGGGAGGATGAAAACGAATTTATTCTACTTGTCTCTCTATGCATTTTCTCTTTCTTCTCTTCTCCTCGCATAATTTTGTTGACTGAGAAAGAGGATCAATTACTGACTATTGGAAGAAGAGACTTGGGTTATGGGCTAGTGAGGACGTTGGGCTCTAAGGGGTGAATTGTGAGATCCTACATTGGTTGGTAACGGGAACGGCACATTCCTTCTAAGGAGGTAGAAATCTCTCCCTATTAGATGCGTTTTGAAACTTTGAGGGGAAGCTCAGACACCAAACAGCGTGCCAAGTAAGGACAACTTCATTATATAACATTATATAACATTTCTTCCGCTCAAAGGGGTGGATTATGAGATCCTACATTGGTTGGTAAGGGGAATGGCACATTCCTTCAAGGAGGTGGAAATCTCTCCCTAATAGATGCGTTTTACAACTTTGAGGTGGAAATCTCTCCCTAATAGATGCGTTTTACAACTTTGAGGGGAAGCTCAGACACCAAACGGCGTACCAATAAGGACAACTTCATTATATAACATTTCTAACCACTGCTCAAGGATAGAACACCCTGGAAATTTCAAGAGAAACTTTATATTCTCGTTTATACATGACTAAATAATGGAAGGTAATCTATATAGCATACCAATTCTCTTCATCTTGTTGATTGGTGCAATTTATGGCTGATGCTCGGATTCTTATACAGTGATAATTTCTAATTTATTATGATCAATTTTTTTCAGTTTCTGTTTCTTAATCTTATTTAAAGTGTATCTAATACTGTGGTTTTCAAAACCATTCAGCTGCTGATTCTGTGGCTCGGAGAATACAAACATATTAGTGATACTGTACGATGATGATTTTGTCGGGATTGAGTGGCAAACCCTCAAAATGTTGTCCTCTGAGACCTAGTACTAGGATTCAACGTGAGCTGATTTCATCTTTTCCCAATGGGAACTTTAGAGAAATTATTGATTTGCAGTATCTCAAAAGGTTCTGCTCACTAATACACGCTATTGTTCTGATGTGGTGTTTCCAGTTCACCCTCATTTAACTTGTTTAATGCAGAAATTACTGGACGGGTCCTGCTCTTAGATGCAAAACTCTCCAAATTCGACACACTACTAAGTGTGCATTTGATGCTTCCTCCAGAGATCTTGCAAATGATTCTGCTGGTATTGTTCCTATTCCCTTGTTGAAATGGTATTAGACAACAAAATTATGTGGCTTGAAAGGGAAAATTAGAAGTTTGGGGACCGTTTAGACTAATGGTTACAACCCTCAAGGGTTAAATATTCAGATTTGGAAATTCATGATCAAAATACTCTTAGAAGGTAAAAGTTCATGGCCAAAACTATGATTTTCTCTGCTAGTGCAGCTGAATTCCCTCGAATTCATGTAAGGGATCCATACAAACGGCTCGGCATAAGTAAGGAAGCATCAGAAGATGAAATTCAATCTGCCAGAAACTTCCTTATTAATAGGTACGCAGGGCACAAAGACAGTGTTGATGCCATTGAAGCAGCTCATGATAAAATTATTATGCAAAAATTTTACGACAGAAAGAACCCGAAAATTGACCTCAAGAAAAAGGTGAGGGAAGTCAATCAGTCACGGGTTGTGCAGGCTATAAGGAGCAGGTTTCAAACACCATCTACAAAATTCATAATCACGGCATTAATTGCATTTTTAGTTCTTGGCGTTCTTACCATTCTCTTCCCAACTGAGGAAGGCCCAACCCTCCAGGTTGCTGTATCACTCATAGCGACGTTCTATTTCATACACGATCGACTGAAGAGCAAACTCCGAGCATTCCTTTATGGGTACGTCCAGAATATGCATATCGTTCCCTTTTTTAACTTTATGAATGAACATAATATATCTTTTTTTGTTGATTGATTGGCTACTCTCCTTTCCTACAACCATATAGAACAGAATTCAATGGTTTCTGATAAGATAACTGAGTTTAATTAATGGGAGTTTTTTTTTCAATGGTACAGGGCTGGAGCTTTCATATTCTCATGGCTGTTGGGAACCTTTTTGGTGGTATCTGTGATCCCCCCTGTTATAAAAGGATTGAGAGGCTTTGAAGTAACCACTTCACTAATAACCTATATCTTACTCTGGGTTTCATCTACGTATTTAAAGTAGCAGAGCAAAGATTTTTTCTATTGTGAGGTTCGAATTTTTCTGGGGCCAAAAGCGCGAAGTGTATTAAGCTTCTTTCTTTTTTTTTTAGCCTGAGCCATAAGGTGTGGACTTTAGCGAGGTGAGGCACCATGTCGTATGAAAAATAGTTTTCATTTAGTCTATGGAACTTTTTAAGTTCAATCTCAAATCATAGTTTCGTCTACAGTTCTATTATTTAGTTGACAATATAATTTTTGTACTTTTAAAATTATAATGATCAG TTTTTCAGAAAGCAGGGTTTAGTGGTTCGGTAGCGCACTTCGAAAGCTCTAGGTCAGCGTCTTCCCTCTCCCTTCAGCTCAGCATGTGCGATCGACCCAACTGAAGCTTTTGCTTATCGGACCGCCGTGCATTTTCGCCCATGAGGTTTTGAGCTTCATTTCATTTCGTGTGTTTTTTGAGGTTGATTTTGGGTGGATGGTGAACCAAGCGAATTTTATCAATTGAGGTTCTGCTGGAATTTACTATTGTTTCGTCATGCATCGCATAATTTTGCTCTTTTGTACTCTAAAAATTAGTTAACCTTCACTGCGGCATTTCCTTTGATTGGTTGAATGGGTTTAGCTCTCTTAACTCCACTCTATAGCTCACATGTTGAACCCTGAAAGTGGAATGAATGTTCTAGAAAAATTTGATTGCGGGTTGAAAGTTTTATCCAAATGGGCTGCGAGGGAGGATGAAAACGAATTTATTCTACTTGTCTCTCTATGCATTTTCTCTTTCTTCTCTTCTCCTCGCATAATTTTGTTGACTGAGAAAGAGGATCAATTACTGACTATTGGAAGAAGAGACTTGGGTTATGGGCTAGTGAGGACGTTGGGCTCTAAGGGGTGAATTGTGAGATCCTACATTGGTTGGTAACGGGAACGGCACATTCCTTCTAAGGAGGTAGAAATCTCTCCCTATTAGATGCGTTTTGAAACTTTGAGGGGAAGCTCAGACACCAAACAGCGTGCCAAGTAAGGACAACTTCATTATATAACATTATATAACATTTCTTCCGCTCAAAGGGGTGGATTATGAGATCCTACATTGGTTGGTAAGGGGAATGGCACATTCCTTCAAGGAGGTGGAAATCTCTCCCTAATAGATGCGTTTTACAACTTTGAGGTGGAAATCTCTCCCTAATAGATGCGTTTTACAACTTTGAGGGGAAGCTCAGACACCAAACGGCGTACCAATAAGGACAACTTCATTATATAACATTTCTAACCACTGCTCAAGGATAGAACACCCTGGAAATTTCAAGAGAAACTTTATATTCTCGTTTATACATGACTAAATAATGGAAGCTGCTGATTCTGTGGCTCGGAGAATACAAACATATTAGTGATACTGTACGATGATGATTTTGTCGGGATTGAGTGGCAAACCCTCAAAATGTTGTCCTCTGAGACCTAGTACTAGGATTCAACGTGAGCTGATTTCATCTTTTCCCAATGGGAACTTTAGAGAAATTATTGATTTGCAGTATCTCAAAAGAAATTACTGGACGGGTCCTGCTCTTAGATGCAAAACTCTCCAAATTCGACACACTACTAAGTGTGCATTTGATGCTTCCTCCAGAGATCTTGCAAATGATTCTGCTGGTATTGTTCCTATTCCCTTGTTGAAATGTGCAGCTGAATTCCCTCGAATTCATGTAAGGGATCCATACAAACGGCTCGGCATAAGTAAGGAAGCATCAGAAGATGAAATTCAATCTGCCAGAAACTTCCTTATTAATAGGTACGCAGGGCACAAAGACAGTGTTGATGCCATTGAAGCAGCTCATGATAAAATTATTATGCAAAAATTTTACGACAGAAAGAACCCGAAAATTGACCTCAAGAAAAAGGTGAGGGAAGTCAATCAGTCACGGGTTGTGCAGGCTATAAGGAGCAGGTTTCAAACACCATCTACAAAATTCATAATCACGGCATTAATTGCATTTTTAGTTCTTGGCGTTCTTACCATTCTCTTCCCAACTGAGGAAGGCCCAACCCTCCAGGTTGCTGTATCACTCATAGCGACGTTCTATTTCATACACGATCGACTGAAGAGCAAACTCCGAGCATTCCTTTATGGGGCTGGAGCTTTCATATTCTCATGGCTGTTGGGAACCTTTTTGGTGGTATCTGTGATCCCCCCTGTTATAAAAGGATTGAGAGGCTTTGAAGTAACCACTTCACTAATAACCTATATCTTACTCTGGGTTTCATCTACGTATTTAAAGTAGCAGAGCAAAGATTTTTTCTATTGTGAGGTTCGAATTTTTCTGGGGCCAAAAGCGCGAAGTGTATTAAGCTTCTTTCTTTTTTTTTTAGCCTGAGCCATAAGGTGTGGACTTTAGCGAGGTGAGGCACCATGTCGTATGAAAAATAGTTTTCATTTAGTCTATGGAACTTTTTAAGTTCAATCTCAAATCATAGTTTCGTCTACAGTTCTATTATTTAGTTGACAATATAATTTTTGTACTTTTAAAATTATAATGATCAG ATGATGATTTTGTCGGGATTGAGTGGCAAACCCTCAAAATGTTGTCCTCTGAGACCTAGTACTAGGATTCAACGTGAGCTGATTTCATCTTTTCCCAATGGGAACTTTAGAGAAATTATTGATTTGCAGTATCTCAAAAGAAATTACTGGACGGGTCCTGCTCTTAGATGCAAAACTCTCCAAATTCGACACACTACTAAGTGTGCATTTGATGCTTCCTCCAGAGATCTTGCAAATGATTCTGCTGGTATTGTTCCTATTCCCTTGTTGAAATGTGCAGCTGAATTCCCTCGAATTCATGTAAGGGATCCATACAAACGGCTCGGCATAAGTAAGGAAGCATCAGAAGATGAAATTCAATCTGCCAGAAACTTCCTTATTAATAGGTACGCAGGGCACAAAGACAGTGTTGATGCCATTGAAGCAGCTCATGATAAAATTATTATGCAAAAATTTTACGACAGAAAGAACCCGAAAATTGACCTCAAGAAAAAGGTGAGGGAAGTCAATCAGTCACGGGTTGTGCAGGCTATAAGGAGCAGGTTTCAAACACCATCTACAAAATTCATAATCACGGCATTAATTGCATTTTTAGTTCTTGGCGTTCTTACCATTCTCTTCCCAACTGAGGAAGGCCCAACCCTCCAGGTTGCTGTATCACTCATAGCGACGTTCTATTTCATACACGATCGACTGAAGAGCAAACTCCGAGCATTCCTTTATGGGGCTGGAGCTTTCATATTCTCATGGCTGTTGGGAACCTTTTTGGTGGTATCTGTGATCCCCCCTGTTATAAAAGGATTGAGAGGCTTTGAAGTAACCACTTCACTAATAACCTATATCTTACTCTGGGTTTCATCTACGTATTTAAAGTAG MMILSGLSGKPSKCCPLRPSTRIQRELISSFPNGNFREIIDLQYLKRNYWTGPALRCKTLQIRHTTKCAFDASSRDLANDSAGIVPIPLLKCAAEFPRIHVRDPYKRLGISKEASEDEIQSARNFLINRYAGHKDSVDAIEAAHDKIIMQKFYDRKNPKIDLKKKVREVNQSRVVQAIRSRFQTPSTKFIITALIAFLVLGVLTILFPTEEGPTLQVAVSLIATFYFIHDRLKSKLRAFLYGAGAFIFSWLLGTFLVVSVIPPVIKGLRGFEVTTSLITYILLWVSSTYLK Homology
BLAST of CmoCh04G007960 vs. ExPASy Swiss-Prot
Match: G5DBJ0 (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Nicotiana benthamiana OX=4100 GN=CPP1 PE=1 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 8.8e-34 Identity = 83/199 (41.71%), Postives = 126/199 (63.32%), Query Frame = 0
BLAST of CmoCh04G007960 vs. ExPASy Swiss-Prot
Match: Q9FN50 (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPP1 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 6.3e-32 Identity = 89/229 (38.86%), Postives = 131/229 (57.21%), Query Frame = 0
BLAST of CmoCh04G007960 vs. ExPASy TrEMBL
Match: A0A6J1FR01 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111447658 PE=4 SV=1) HSP 1 Score: 540.4 bits (1391), Expect = 4.5e-150 Identity = 280/291 (96.22%), Postives = 280/291 (96.22%), Query Frame = 0
BLAST of CmoCh04G007960 vs. ExPASy TrEMBL
Match: A0A1S3BTS0 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493178 PE=4 SV=1) HSP 1 Score: 492.3 bits (1266), Expect = 1.4e-135 Identity = 252/290 (86.90%), Postives = 267/290 (92.07%), Query Frame = 0
BLAST of CmoCh04G007960 vs. ExPASy TrEMBL
Match: A0A6J1ENN6 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435993 PE=4 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 4.1e-135 Identity = 256/291 (87.97%), Postives = 268/291 (92.10%), Query Frame = 0
BLAST of CmoCh04G007960 vs. ExPASy TrEMBL
Match: A0A0A0KUU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047350 PE=4 SV=1) HSP 1 Score: 489.6 bits (1259), Expect = 9.2e-135 Identity = 251/290 (86.55%), Postives = 266/290 (91.72%), Query Frame = 0
BLAST of CmoCh04G007960 vs. ExPASy TrEMBL
Match: A0A6J1J3L0 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483081 PE=4 SV=1) HSP 1 Score: 485.7 bits (1249), Expect = 1.3e-133 Identity = 252/290 (86.90%), Postives = 267/290 (92.07%), Query Frame = 0
BLAST of CmoCh04G007960 vs. NCBI nr
Match: XP_022942702.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita moschata] >XP_022942703.1 protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 540.4 bits (1391), Expect = 9.4e-150 Identity = 280/291 (96.22%), Postives = 280/291 (96.22%), Query Frame = 0
BLAST of CmoCh04G007960 vs. NCBI nr
Match: KAG6600573.1 (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 540.0 bits (1390), Expect = 1.2e-149 Identity = 279/291 (95.88%), Postives = 280/291 (96.22%), Query Frame = 0
BLAST of CmoCh04G007960 vs. NCBI nr
Match: XP_023545533.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023545541.1 protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 538.9 bits (1387), Expect = 2.7e-149 Identity = 278/291 (95.53%), Postives = 280/291 (96.22%), Query Frame = 0
BLAST of CmoCh04G007960 vs. NCBI nr
Match: KAG7031213.1 (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 538.5 bits (1386), Expect = 3.6e-149 Identity = 278/290 (95.86%), Postives = 279/290 (96.21%), Query Frame = 0
BLAST of CmoCh04G007960 vs. NCBI nr
Match: XP_038891329.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 495.4 bits (1274), Expect = 3.5e-136 Identity = 253/290 (87.24%), Postives = 266/290 (91.72%), Query Frame = 0
BLAST of CmoCh04G007960 vs. TAIR 10
Match: AT3G51140.1 (Protein of unknown function (DUF3353) ) HSP 1 Score: 295.0 bits (754), Expect = 6.4e-80 Identity = 152/223 (68.16%), Postives = 180/223 (80.72%), Query Frame = 0
BLAST of CmoCh04G007960 vs. TAIR 10
Match: AT5G23040.1 (Protein of unknown function (DUF3353) ) HSP 1 Score: 139.4 bits (350), Expect = 4.5e-33 Identity = 89/229 (38.86%), Postives = 131/229 (57.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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