CmoCh04G006210 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCATGCTGCCTATCATCTTCATCTTCCTCATCTTCACTTCACCTTCCTCAGGTACTTTCCATTATCACTTCAAATTCATAACTAATCTCAATCTAATTGCAAATGGCTCACATTCCATTGCAGGACGAGCTCATGGCCCGAGCCTCGAGCCAGGTTTAAACGAAAAACTAAACCCTTACAATCAGGTAAGACAACTATTGGTTAAGACATATATTATCGATCAATAGCTCAAACTCGGACGTTAATGTGCAGAGAATTGTGATGAGAAAGGTTTTGGGAATGGATGCAACGTTGATGGACTACCATGAACCAGGTGCTAACCCAAGCCACGAGCCAAGAAGGGGAAGCCCCGGAGGTCGAGCAAGTTTCAATCCATGA ATGGCTTCCATGCTGCCTATCATCTTCATCTTCCTCATCTTCACTTCACCTTCCTCAGGACGAGCTCATGGCCCGAGCCTCGAGCCAGGTTTAAACGAAAAACTAAACCCTTACAATCAGAGAATTGTGATGAGAAAGGTTTTGGGAATGGATGCAACGTTGATGGACTACCATGAACCAGGTGCTAACCCAAGCCACGAGCCAAGAAGGGGAAGCCCCGGAGGTCGAGCAAGTTTCAATCCATGA ATGGCTTCCATGCTGCCTATCATCTTCATCTTCCTCATCTTCACTTCACCTTCCTCAGGACGAGCTCATGGCCCGAGCCTCGAGCCAGGTTTAAACGAAAAACTAAACCCTTACAATCAGAGAATTGTGATGAGAAAGGTTTTGGGAATGGATGCAACGTTGATGGACTACCATGAACCAGGTGCTAACCCAAGCCACGAGCCAAGAAGGGGAAGCCCCGGAGGTCGAGCAAGTTTCAATCCATGA MASMLPIIFIFLIFTSPSSGRAHGPSLEPGLNEKLNPYNQRIVMRKVLGMDATLMDYHEPGANPSHEPRRGSPGGRASFNP Homology
BLAST of CmoCh04G006210 vs. ExPASy TrEMBL
Match: A0A5A7TNM7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003170 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.7e-06 Identity = 37/59 (62.71%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of CmoCh04G006210 vs. ExPASy TrEMBL
Match: A0A6A1ULL4 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004811 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.5e-06 Identity = 34/79 (43.04%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of CmoCh04G006210 vs. ExPASy TrEMBL
Match: A0A5D3D203 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003180 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.5e-05 Identity = 41/77 (53.25%), Postives = 46/77 (59.74%), Query Frame = 0
BLAST of CmoCh04G006210 vs. ExPASy TrEMBL
Match: A0A0A0KYH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055320 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.5e-05 Identity = 40/77 (51.95%), Postives = 46/77 (59.74%), Query Frame = 0
BLAST of CmoCh04G006210 vs. NCBI nr
Match: KAG6600410.1 (hypothetical protein SDJN03_05643, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 158.7 bits (400), Expect = 2.1e-35 Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of CmoCh04G006210 vs. NCBI nr
Match: KAG6577122.1 (hypothetical protein SDJN03_24696, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 69.7 bits (169), Expect = 1.3e-08 Identity = 38/75 (50.67%), Postives = 44/75 (58.67%), Query Frame = 0
BLAST of CmoCh04G006210 vs. NCBI nr
Match: KAG6600409.1 (hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 66.2 bits (160), Expect = 1.4e-07 Identity = 40/81 (49.38%), Postives = 51/81 (62.96%), Query Frame = 0
BLAST of CmoCh04G006210 vs. NCBI nr
Match: KAA0044962.1 (hypothetical protein E6C27_scaffold74G002680 [Cucumis melo var. makuwa] >TYK16508.1 hypothetical protein E5676_scaffold21G003170 [Cucumis melo var. makuwa]) HSP 1 Score: 61.6 bits (148), Expect = 3.6e-06 Identity = 37/59 (62.71%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of CmoCh04G006210 vs. NCBI nr
Match: KAB1201142.1 (hypothetical protein CJ030_MR0G004811 [Morella rubra]) HSP 1 Score: 59.7 bits (143), Expect = 1.4e-05 Identity = 34/79 (43.04%), Postives = 46/79 (58.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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