CmoCh04G005040 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G005040
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptiontranscription factor MYB44-like
LocationCmo_Chr04: 2511989 .. 2512575 (-)
RNA-Seq ExpressionCmoCh04G005040
SyntenyCmoCh04G005040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTCTGAAGAGTGGGACATCGATCGGGTCAAGGGCCCATGGAGCCCGGAGGAAGACCAGTTGCTAAGGATTCTAGTGCAGCGCTACGGCGCTCGGAACTGGTCTGTTATCGGTCAGTCGATTCACGGACGGTCGGGGAAATCCTGCCGTCTGCGGTGGTTTAATCAGCTCTGTCCTGACGTGGAGCGCCAGGCGTTCACTGCGGAGGAGGACGAGGTCATCGTCGAAGCACACGCTAAGCACGGGAACAAGTGGGCGACAATCGCGAGACTACTCAACGGACGCACAGACAACGCGATTAAGAATCACTGGAATTCAACATTGAAGCGTAAGTTCTCTTCGATTGCTGAGATAAAAACTGAGTGTACGAGTCATGGATCGACGATTTCGATTGGAAATCAGTGTTTGAGTCCATCGAGATCGGATACGAACGATTCGATTCCGAGTCAGAACAAAAGGCCTTCGACTCGTCTAAGCCTATCTCTTCCAGGAACAGAATCATCGCCTCCGCGACCGCAGCAGCAGAGTATTTCATCATTGCCGGAGGATCGGGAGGCGAAAGCGAAATCGGCGCGTTGTGGTAA

mRNA sequence

ATGACGTCTGAAGAGTGGGACATCGATCGGGTCAAGGGCCCATGGAGCCCGGAGGAAGACCAGTTGCTAAGGATTCTAGTGCAGCGCTACGGCGCTCGGAACTGGTCTGTTATCGGTCAGTCGATTCACGGACGGTCGGGGAAATCCTGCCGTCTGCGGTGGTTTAATCAGCTCTGTCCTGACGTGGAGCGCCAGGCGTTCACTGCGGAGGAGGACGAGGTCATCGTCGAAGCACACGCTAAGCACGGGAACAAGTGGGCGACAATCGCGAGACTACTCAACGGACGCACAGACAACGCGATTAAGAATCACTGGAATTCAACATTGAAGCTGTTTGAGTCCATCGAGATCGGATACGAACGATTCGATTCCGAGTCAGAACAAAAGGCCTTCGACTCGTCTAAGCCTATCTCTTCCAGGAACAGAATCATCGCCTCCGCGACCGCAGCAGCAGAGTATTTCATCATTGCCGGAGGATCGGGAGGCGAAAGCGAAATCGGCGCGTTGTGGTAA

Coding sequence (CDS)

ATGACGTCTGAAGAGTGGGACATCGATCGGGTCAAGGGCCCATGGAGCCCGGAGGAAGACCAGTTGCTAAGGATTCTAGTGCAGCGCTACGGCGCTCGGAACTGGTCTGTTATCGGTCAGTCGATTCACGGACGGTCGGGGAAATCCTGCCGTCTGCGGTGGTTTAATCAGCTCTGTCCTGACGTGGAGCGCCAGGCGTTCACTGCGGAGGAGGACGAGGTCATCGTCGAAGCACACGCTAAGCACGGGAACAAGTGGGCGACAATCGCGAGACTACTCAACGGACGCACAGACAACGCGATTAAGAATCACTGGAATTCAACATTGAAGCTGTTTGAGTCCATCGAGATCGGATACGAACGATTCGATTCCGAGTCAGAACAAAAGGCCTTCGACTCGTCTAAGCCTATCTCTTCCAGGAACAGAATCATCGCCTCCGCGACCGCAGCAGCAGAGTATTTCATCATTGCCGGAGGATCGGGAGGCGAAAGCGAAATCGGCGCGTTGTGGTAA

Protein sequence

MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKLFESIEIGYERFDSESEQKAFDSSKPISSRNRIIASATAAAEYFIIAGGSGGESEIGALW
Homology
[Close]
BLAST of CmoCh04G005040 vs. ExPASy Swiss-Prot
Match: O23160 (Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.1e-43
Identity = 79/110 (71.82%), Postives = 95/110 (86.36%), Query Frame = 0 

Query: 7   DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQA 66
           +++R+KGPWSPEED LL+ LVQ++G RNWS+I +SI GRSGKSCRLRW NQL P+VE +A
Sbjct: 8   NMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRA 67

Query: 67  FTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKLFESIE 117
           F+ EEDE I+ AHA+ GNKWATI+RLLNGRTDNAIKNHWNSTLK   S+E
Sbjct: 68  FSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVE 117

[Close]
BLAST of CmoCh04G005040 vs. ExPASy Swiss-Prot
Match: Q9FDW1 (Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.9e-42
Identity = 78/102 (76.47%), Postives = 87/102 (85.29%), Query Frame = 0 

Query: 9   DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFT 68
           DR+KGPWSPEED+ LR LV +YG RNW+VI +SI GRSGKSCRLRW NQL P VE + F+
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
           AEEDE I  AHA+ GNKWATIARLLNGRTDNA+KNHWNSTLK
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLK 104

[Close]
BLAST of CmoCh04G005040 vs. ExPASy Swiss-Prot
Match: Q9SN12 (Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-40
Identity = 76/102 (74.51%), Postives = 86/102 (84.31%), Query Frame = 0 

Query: 9   DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFT 68
           DRVKGPWS EED+ LR +V++YG RNWS I +SI GRSGKSCRLRW NQL P+VE + F+
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
            EEDE IV A A+ GNKWATIARLLNGRTDNA+KNHWNSTLK
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLK 104

[Close]
BLAST of CmoCh04G005040 vs. ExPASy Swiss-Prot
Match: Q42575 (Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.0e-37
Identity = 72/102 (70.59%), Postives = 82/102 (80.39%), Query Frame = 0 

Query: 9   DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFT 68
           DRVKGPWS EED +L  LV+R GARNWS I +SI GRSGKSCRLRW NQL P++ R +FT
Sbjct: 52  DRVKGPWSKEEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRNSFT 111

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
             ED+ I+ AHA HGNKWA IA+LL GRTDNAIKNHWNS L+
Sbjct: 112 EVEDQAIIAAHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALR 153

[Close]
BLAST of CmoCh04G005040 vs. ExPASy Swiss-Prot
Match: Q08759 (Transcriptional activator Myb OS=Xenopus laevis OX=8355 GN=myb PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-32
Identity = 69/143 (48.25%), Postives = 94/143 (65.73%), Query Frame = 0 

Query: 11  VKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAE 70
           +KGPW+ EEDQ +  LV +YG + WSVI + + GR GK CR RW N L P+V++ ++T E
Sbjct: 88  IKGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEE 147

Query: 71  EDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKLFESIEIGYERFDSESEQKA 130
           ED  I EAH + GN+WA IA+LL GRTDNAIKNHWNST++  E  E GY +  S++ Q  
Sbjct: 148 EDRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKEEQE-GYLQNSSKTNQHT 207

Query: 131 FDSSKPISSRNRIIASATAAAEY 154
             ++ P S+         A+AE+
Sbjct: 208 IVTNFPKSNHLMTFTHTRASAEH 229

[Close]
BLAST of CmoCh04G005040 vs. ExPASy TrEMBL
Match: A0A6J1FV84 (transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111447156 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.8e-59
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 110

[Close]
BLAST of CmoCh04G005040 vs. ExPASy TrEMBL
Match: A0A6J1IWV0 (transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111481371 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.4e-58
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0 

Query: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKG WSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 110

[Close]
BLAST of CmoCh04G005040 vs. ExPASy TrEMBL
Match: A0A6J1JCR2 (transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111483237 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.6e-49
Identity = 94/110 (85.45%), Postives = 102/110 (92.73%), Query Frame = 0 

Query: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           M S + +IDRVKGPWSPEED++LR+LVQ  GARNWS+I QSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MGSRKGNIDRVKGPWSPEEDEMLRMLVQSQGARNWSIISQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
            VER+AFTAEEDEVI EAHAK+GNKWATIARLLNGRTDNAIKNHWNSTLK
Sbjct: 61  GVERRAFTAEEDEVITEAHAKYGNKWATIARLLNGRTDNAIKNHWNSTLK 110

[Close]
BLAST of CmoCh04G005040 vs. ExPASy TrEMBL
Match: A0A6J1E4J2 (transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111430691 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 94/110 (85.45%), Postives = 101/110 (91.82%), Query Frame = 0 

Query: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           M S +  IDRVKGPWSPEED++LR+LVQ  GARNWS+I QSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MGSRKGKIDRVKGPWSPEEDEMLRMLVQSQGARNWSIISQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
            VER+AFTAEEDEVI EAHAK+GNKWATIARLLNGRTDNAIKNHWNSTLK
Sbjct: 61  GVERRAFTAEEDEVITEAHAKYGNKWATIARLLNGRTDNAIKNHWNSTLK 110

[Close]
BLAST of CmoCh04G005040 vs. ExPASy TrEMBL
Match: A0A5A7T4X0 (Transcription factor MYB44-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G00990 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 4.2e-47
Identity = 94/122 (77.05%), Postives = 102/122 (83.61%), Query Frame = 0 

Query: 8   IDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAF 67
           IDRVKGPWSPEED LLR+LVQ  GARNWS+I QSIHGRSGKSCRLRWFNQLCP VER+AF
Sbjct: 8   IDRVKGPWSPEEDLLLRMLVQNQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGVERRAF 67

Query: 68  TAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKLFESIEIGYERFDSESE 127
           T EED++IVEAH K+GNKWATIARLLNGRTDNAIKNHWNSTLK          +F S  E
Sbjct: 68  TPEEDKIIVEAHRKYGNKWATIARLLNGRTDNAIKNHWNSTLK---------RKFSSNGE 120

Query: 128 QK 130
           +K
Sbjct: 128 KK 120

[Close]
BLAST of CmoCh04G005040 vs. NCBI nr
Match: KAG7030966.1 (Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238.0 bits (606), Expect = 5.8e-59
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 110

[Close]
BLAST of CmoCh04G005040 vs. NCBI nr
Match: XP_022941945.1 (transcription factor MYB44-like [Cucurbita moschata])

HSP 1 Score: 238.0 bits (606), Expect = 5.8e-59
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 110

[Close]
BLAST of CmoCh04G005040 vs. NCBI nr
Match: KAG6600306.1 (Transcription factor MYB73, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 238.0 bits (606), Expect = 5.8e-59
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 110

[Close]
BLAST of CmoCh04G005040 vs. NCBI nr
Match: XP_023512939.1 (transcription factor MYB73-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.0 bits (598), Expect = 4.9e-58
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0 

Query: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSI GRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 110

[Close]
BLAST of CmoCh04G005040 vs. NCBI nr
Match: XP_022982532.1 (transcription factor MYB44-like [Cucurbita maxima])

HSP 1 Score: 235.0 bits (598), Expect = 4.9e-58
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0 

Query: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKG WSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 110

[Close]
BLAST of CmoCh04G005040 vs. TAIR 10
Match: AT2G23290.1 (myb domain protein 70 )

HSP 1 Score: 177.2 bits (448), Expect = 1.1e-44
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 7   DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQA 66
           ++DR+KGPWSPEED LL+ LVQ++G RNWS+I +SI GRSGKSCRLRW NQL P+VE + 
Sbjct: 8   EMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRG 67

Query: 67  FTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
           FTAEED+ I+ AHA+ GNKWATIARLLNGRTDNAIKNHWNSTLK
Sbjct: 68  FTAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLK 111

[Close]
BLAST of CmoCh04G005040 vs. TAIR 10
Match: AT4G37260.1 (myb domain protein 73 )

HSP 1 Score: 175.3 bits (443), Expect = 4.3e-44
Identity = 79/110 (71.82%), Postives = 95/110 (86.36%), Query Frame = 0 

Query: 7   DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQA 66
           +++R+KGPWSPEED LL+ LVQ++G RNWS+I +SI GRSGKSCRLRW NQL P+VE +A
Sbjct: 8   NMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRA 67

Query: 67  FTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKLFESIE 117
           F+ EEDE I+ AHA+ GNKWATI+RLLNGRTDNAIKNHWNSTLK   S+E
Sbjct: 68  FSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVE 117

[Close]
BLAST of CmoCh04G005040 vs. TAIR 10
Match: AT5G67300.1 (myb domain protein r1 )

HSP 1 Score: 172.6 bits (436), Expect = 2.8e-43
Identity = 78/102 (76.47%), Postives = 87/102 (85.29%), Query Frame = 0 

Query: 9   DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFT 68
           DR+KGPWSPEED+ LR LV +YG RNW+VI +SI GRSGKSCRLRW NQL P VE + F+
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
           AEEDE I  AHA+ GNKWATIARLLNGRTDNA+KNHWNSTLK
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLK 104

[Close]
BLAST of CmoCh04G005040 vs. TAIR 10
Match: AT3G50060.1 (myb domain protein 77 )

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 76/102 (74.51%), Postives = 86/102 (84.31%), Query Frame = 0 

Query: 9   DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFT 68
           DRVKGPWS EED+ LR +V++YG RNWS I +SI GRSGKSCRLRW NQL P+VE + F+
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
            EEDE IV A A+ GNKWATIARLLNGRTDNA+KNHWNSTLK
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLK 104

[Close]
BLAST of CmoCh04G005040 vs. TAIR 10
Match: AT3G09230.1 (myb domain protein 1 )

HSP 1 Score: 155.6 bits (392), Expect = 3.5e-38
Identity = 72/102 (70.59%), Postives = 82/102 (80.39%), Query Frame = 0 

Query: 9   DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFT 68
           DRVKGPWS EED +L  LV+R GARNWS I +SI GRSGKSCRLRW NQL P++ R +FT
Sbjct: 52  DRVKGPWSKEEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRNSFT 111

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLK 111
             ED+ I+ AHA HGNKWA IA+LL GRTDNAIKNHWNS L+
Sbjct: 112 EVEDQAIIAAHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALR 153

The following BLAST results are available for this feature:
BLAST of CmoCh04G005040 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O231606.1e-4371.82Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1[more]
Q9FDW13.9e-4276.47Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1[more]
Q9SN121.7e-4074.51Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1[more]
Q425755.0e-3770.59Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1[more]
Q087591.7e-3248.25Transcriptional activator Myb OS=Xenopus laevis OX=8355 GN=myb PE=2 SV=1[more]
BLAST of CmoCh04G005040 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FV842.8e-59100.00transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111447156 PE... [more]
A0A6J1IWV02.4e-5899.09transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111481371 PE=4... [more]
A0A6J1JCR21.6e-4985.45transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111483237 PE=4... [more]
A0A6J1E4J22.6e-4985.45transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111430691 PE... [more]
A0A5A7T4X04.2e-4777.05Transcription factor MYB44-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
BLAST of CmoCh04G005040 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7030966.15.8e-59100.00Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022941945.15.8e-59100.00transcription factor MYB44-like [Cucurbita moschata][more]
KAG6600306.15.8e-59100.00Transcription factor MYB73, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023512939.14.9e-5899.09transcription factor MYB73-like [Cucurbita pepo subsp. pepo][more]
XP_022982532.14.9e-5899.09transcription factor MYB44-like [Cucurbita maxima][more]
BLAST of CmoCh04G005040 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G23290.11.1e-4475.96myb domain protein 70 [more]
AT4G37260.14.3e-4471.82myb domain protein 73 [more]
AT5G67300.12.8e-4376.47myb domain protein r1 [more]
AT3G50060.11.2e-4174.51myb domain protein 77 [more]
AT3G09230.13.5e-3870.59myb domain protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 63..111
e-value: 3.2E-15
score: 66.5
coord: 11..60
e-value: 7.4E-11
score: 52.1
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 59..109
score: 9.779049
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 7..58
score: 11.300273
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 14..56
e-value: 1.0631E-11
score: 54.889
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 66..109
e-value: 1.78711E-11
score: 54.1186
NoneNo IPR availableGENE3D1.10.10.60coord: 66..111
e-value: 1.3E-20
score: 75.0
NoneNo IPR availableGENE3D1.10.10.60coord: 11..63
e-value: 6.7E-22
score: 79.2
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 5..128
NoneNo IPR availablePANTHERPTHR45614:SF145TRANSCRIPTION FACTOR MYB44-LIKEcoord: 5..128
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 64..108
e-value: 1.4E-16
score: 60.4
coord: 12..57
e-value: 3.6E-15
score: 55.9
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 60..113
score: 24.29702
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 7..58
score: 20.656591
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 9..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G005040.1CmoCh04G005040.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0005634 nucleus
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding