CmoCh04G003790 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G003790
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor ERF106-like
Location	Cmo_Chr04: 1880440 .. 1881039 (-)
RNA-Seq Expression	CmoCh04G003790
Synteny	CmoCh04G003790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCCTTAGAAGAATTCTTCAACATAGAATTCATTACCCAATTTCTTTTGGGAGATTCCTTAGATCATCAAACCCATTTCGAAACAGATTCCTCCTTTCTCCACCCCATCAAATTGGAGGATTTCTTCTTCGATTCTCAAATTACGCCGCCGCTGCCGCTGCCGCCGCCGGTCCCAGCGGAAGGGTCCGACAACGAGACGAAGTCCAGCGAAGTTGTCCACCCGTCGTTGCCGAAGACCGACATGTCGGGCCAAGTCTGCCATGTCAAGGCGGAAGATGCCGTGGCAGGGGCCACCGGCGAGAAGGTGAAGAAGCATTTCCGGGGAGTGCGGCGGCGGCCATGGGGTAAATTTGCAGCGGAGATCCGTGACCCGAACCGGAAAGGGAGCCGGGTTTGGTTGGGGACTTATGACAGTGATGTAGACGCGGCGAAGGCTTACGATTGTGCGGCGTTTAGGCTGAGAGGGAGGAAAGCGATTCTGAATTTTCCATTGGAGGCCGGAGAACCGGACCCGCCGGCGGTGGCGAACTCGAAGAGGGGGAGGCAGAAATGGACGAATGTGAGGAAGGGATTAATGGCAATGAATGAGAAGTGA

mRNA sequence

ATGGCATCCTTAGAAGAATTCTTCAACATAGAATTCATTACCCAATTTCTTTTGGGAGATTCCTTAGATCATCAAACCCATTTCGAAACAGATTCCTCCTTTCTCCACCCCATCAAATTGGAGGATTTCTTCTTCGATTCTCAAATTACGCCGCCGCTGCCGCTGCCGCCGCCGGTCCCAGCGGAAGGGTCCGACAACGAGACGAAGTCCAGCGAAGTTGTCCACCCGTCGTTGCCGAAGACCGACATGTCGGGCCAAGTCTGCCATGTCAAGGCGGAAGATGCCGTGGCAGGGGCCACCGGCGAGAAGGTGAAGAAGCATTTCCGGGGAGTGCGGCGGCGGCCATGGGGTAAATTTGCAGCGGAGATCCGTGACCCGAACCGGAAAGGGAGCCGGGTTTGGTTGGGGACTTATGACAGTGATGTAGACGCGGCGAAGGCTTACGATTGTGCGGCGTTTAGGCTGAGAGGGAGGAAAGCGATTCTGAATTTTCCATTGGAGGCCGGAGAACCGGACCCGCCGGCGGTGGCGAACTCGAAGAGGGGGAGGCAGAAATGGACGAATGTGAGGAAGGGATTAATGGCAATGAATGAGAAGTGA

Coding sequence (CDS)

ATGGCATCCTTAGAAGAATTCTTCAACATAGAATTCATTACCCAATTTCTTTTGGGAGATTCCTTAGATCATCAAACCCATTTCGAAACAGATTCCTCCTTTCTCCACCCCATCAAATTGGAGGATTTCTTCTTCGATTCTCAAATTACGCCGCCGCTGCCGCTGCCGCCGCCGGTCCCAGCGGAAGGGTCCGACAACGAGACGAAGTCCAGCGAAGTTGTCCACCCGTCGTTGCCGAAGACCGACATGTCGGGCCAAGTCTGCCATGTCAAGGCGGAAGATGCCGTGGCAGGGGCCACCGGCGAGAAGGTGAAGAAGCATTTCCGGGGAGTGCGGCGGCGGCCATGGGGTAAATTTGCAGCGGAGATCCGTGACCCGAACCGGAAAGGGAGCCGGGTTTGGTTGGGGACTTATGACAGTGATGTAGACGCGGCGAAGGCTTACGATTGTGCGGCGTTTAGGCTGAGAGGGAGGAAAGCGATTCTGAATTTTCCATTGGAGGCCGGAGAACCGGACCCGCCGGCGGTGGCGAACTCGAAGAGGGGGAGGCAGAAATGGACGAATGTGAGGAAGGGATTAATGGCAATGAATGAGAAGTGA

Protein sequence

MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVPAEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSKRGRQKWTNVRKGLMAMNEK

Homology

[Close]

BLAST of CmoCh04G003790 vs. ExPASy Swiss-Prot
Match: Q9LY05 (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 GN=ERF106 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.8e-31
Identity = 82/189 (43.39%), Postives = 112/189 (59.26%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSL---DHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPP 60
           MAS EE  ++E I   LL D L        F+ D+SF+  +    +  +  +    P  P
Sbjct: 1   MASFEESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGL----WCIEPHVPKQEPDSP 60

Query: 61  PVPAEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGA---TGEKVKKHFRGVRRR 120
            +  +   NE    E    S    +++      + + +V  A     E   +H+RGVRRR
Sbjct: 61  VLDPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRR 120

Query: 121 PWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPP 180
           PWGKFAAEIRDP +KGSR+WLGT++SDVDAA+AYDCAAF+LRGRKA+LNFPL+AG+ + P
Sbjct: 121 PWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEAP 180

Query: 181 AVANSKRGR 184
           A +  KR R
Sbjct: 181 ANSGRKRKR 185

[Close]

BLAST of CmoCh04G003790 vs. ExPASy Swiss-Prot
Match: Q9FKG2 (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana OX=3702 GN=ERF107 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.5e-28
Identity = 69/155 (44.52%), Postives = 95/155 (61.29%), Query Frame = 0


Query: 40  LEDFFFDS--------QITPPLPLPPPVPAEG-SDNETKSSEVVHPSLPKTDMSGQVCHV 99
           +EDF FD          + P  P+P   P+    D ++   E++      +  S      
Sbjct: 28  IEDFVFDDTAFVSGLWSLEPFNPVPKLEPSSPVLDPDSYVQEILQMEAESSSSSSTTTSP 87

Query: 100 KAEDAVAGATGEKVK--KHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAY 159
           + E        ++ +  +H+RGVRRRPWGKFAAEIRDP +KGSR+WLGT++SD+DAA+AY
Sbjct: 88  EVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAY 147

Query: 160 DCAAFRLRGRKAILNFPLEAGEPDPPAVANSKRGR 184
           D AAF+LRGRKA+LNFPL+AG+ D P  +  KR R
Sbjct: 148 DYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRR 182

[Close]

BLAST of CmoCh04G003790 vs. ExPASy Swiss-Prot
Match: O80341 (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ERF5 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26
Identity = 68/147 (46.26%), Postives = 89/147 (60.54%), Query Frame = 0


Query: 43  FFFDSQIT-PPLPLPPPVPAEGSDNETKSSEVVHP----SLPKTDMSGQVCHVKAEDAVA 102
           F FDS+++       P    +        S++  P    SLP      Q      +  V 
Sbjct: 86  FEFDSEVSVSDFDFKPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVT 145

Query: 103 GATGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRG 162
               E+ KKH+RGVR+RPWGKFAAEIRDPN++GSRVWLGT+D+ ++AA+AYD AAFRLRG
Sbjct: 146 KPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRG 205

Query: 163 RKAILNFPLEAGEPDPPAVANSKRGRQ 185
            KAILNFPLE G+  P A    K+ ++
Sbjct: 206 SKAILNFPLEVGKWKPRADEGEKKRKR 232

[Close]

BLAST of CmoCh04G003790 vs. ExPASy Swiss-Prot
Match: Q9FKG1 (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana OX=3702 GN=ERF104 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26
Identity = 78/168 (46.43%), Postives = 101/168 (60.12%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MA+ +E   I+FI+Q LL D +      ETD   L   +L +F  +   T P  +    P
Sbjct: 1   MATKQEALAIDFISQHLLTDFVS----METDHPSLFTNQLHNFHSE---TGPRTITNQSP 60

Query: 61  AEGSD-NETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKF 120
              S  N+ K      P LP   +S  V   K E        E+ ++H+RGVRRRPWGK+
Sbjct: 61  KPNSTLNQRK------PPLPNLSVSRTV-STKTEK-------EEEERHYRGVRRRPWGKY 120

Query: 121 AAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLE 168
           AAEIRDPN+KG R+WLGTYD+ V+A +AYD AAF+LRGRKAILNFPL+
Sbjct: 121 AAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLD 147

[Close]

BLAST of CmoCh04G003790 vs. ExPASy Swiss-Prot
Match: Q40478 (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.1e-25
Identity = 54/84 (64.29%), Postives = 68/84 (80.95%), Query Frame = 0


Query: 105 KKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNF 164
           KKH+RGVR+RPWGKFAAEIRDPNRKG+RVWLGT+D+ ++AAKAYD AAF+LRG KAI+NF
Sbjct: 142 KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNF 201

Query: 165 PLEAG---EPDPPAVANSKRGRQK 186
           PLE     + D   +  +  GR++
Sbjct: 202 PLEVANFKQQDNEILQPANSGRKR 225

[Close]

BLAST of CmoCh04G003790 vs. ExPASy TrEMBL
Match: A0A6J1FRX9 (ethylene-responsive transcription factor ERF106-like OS=Cucurbita moschata OX=3662 GN=LOC111447621 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.8e-110
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP
Sbjct: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60

Query: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA 120
           AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA
Sbjct: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA 120

Query: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180
           AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK
Sbjct: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180

Query: 181 RGRQKWTNVRKGLMAMNEK 200
           RGRQKWTNVRKGLMAMNEK
Sbjct: 181 RGRQKWTNVRKGLMAMNEK 199

[Close]

BLAST of CmoCh04G003790 vs. ExPASy TrEMBL
Match: A0A6J1JQ29 (ethylene-responsive transcription factor ERF106-like OS=Cucurbita maxima OX=3661 GN=LOC111486442 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.1e-102
Identity = 190/199 (95.48%), Postives = 190/199 (95.48%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQIT      PPVP
Sbjct: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQIT------PPVP 60

Query: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA 120
           AE SDNETKSSEVVHPSLPK DMSGQVCHVKAEDAVAG TGEKVKKHFRGVRRRPWGKFA
Sbjct: 61  AERSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGVTGEKVKKHFRGVRRRPWGKFA 120

Query: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180
           AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK
Sbjct: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180

Query: 181 RGRQKWTNVRKGLMAMNEK 200
           RGRQKWTNVRKGLMAMNEK
Sbjct: 181 RGRQKWTNVRKGLMAMNEK 193

[Close]

BLAST of CmoCh04G003790 vs. ExPASy TrEMBL
Match: A0A6J1E4I8 (ethylene-responsive transcription factor ERF106-like OS=Cucurbita moschata OX=3662 GN=LOC111430713 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.3e-71
Identity = 147/202 (72.77%), Postives = 159/202 (78.71%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MAS EEF +IEFITQFLL DS DHQTHF+TDS FLH IKLEDF FDS    P+P P P P
Sbjct: 1   MASSEEFLSIEFITQFLLVDSSDHQTHFQTDSPFLHSIKLEDFIFDS----PIP-PSPPP 60

Query: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGE--KVKKHFRGVRRRPWGK 120
           AEG  N+TK+ EVV  S PKTDMSGQ     AE +VAG T    K + HFRGVRRRPWGK
Sbjct: 61  AEGCYNDTKAGEVVDWSTPKTDMSGQASKADAEASVAGKTDTDGKGRSHFRGVRRRPWGK 120

Query: 121 FAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVAN 180
           FAAEIRDP RKG RVWLGTYDSD+DAAKAYDCAAFRLRGRKA+LNFPLEAGEPDPPA + 
Sbjct: 121 FAAEIRDPTRKGIRVWLGTYDSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAASG 180

Query: 181 SKRGR-QKWTNVRKGLMAMNEK 200
            KRGR QKW N+ K L AM+EK
Sbjct: 181 QKRGRGQKWRNIPKALKAMDEK 197

[Close]

BLAST of CmoCh04G003790 vs. ExPASy TrEMBL
Match: A0A6J1JBI6 (ethylene-responsive transcription factor ERF106-like OS=Cucurbita maxima OX=3661 GN=LOC111483498 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.4e-71
Identity = 146/202 (72.28%), Postives = 159/202 (78.71%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MAS EEF +IEFITQFLL DS DHQTHF+TDS FLH IKLEDF FDS    P+P P P P
Sbjct: 1   MASSEEFLSIEFITQFLLVDSSDHQTHFQTDSPFLHSIKLEDFIFDS----PIP-PSPPP 60

Query: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATG--EKVKKHFRGVRRRPWGK 120
           AEG  N+TKS +V   S PKTDM GQ     AE +VAG T   +K + HFRGVRRRPWGK
Sbjct: 61  AEGCYNDTKSGKVEDWSTPKTDMLGQASKADAEASVAGKTNTDKKGRSHFRGVRRRPWGK 120

Query: 121 FAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVAN 180
           FAAEIRDP RKG RVWLGTY SD+DAAKAYDCAAFRLRGRKA+LNFPLEAGEPDPPAV+ 
Sbjct: 121 FAAEIRDPTRKGIRVWLGTYGSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAVSG 180

Query: 181 SKRGR-QKWTNVRKGLMAMNEK 200
            KRGR QKW N+ K LMAM+EK
Sbjct: 181 QKRGRGQKWRNIPKALMAMDEK 197

[Close]

BLAST of CmoCh04G003790 vs. ExPASy TrEMBL
Match: A0A5A7TMF8 (Ethylene-responsive transcription factor ERF106 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004290 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 3.0e-68
Identity = 144/205 (70.24%), Postives = 157/205 (76.59%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           M S +EF  IEFITQFLLGD  DHQTHF TDS FLHPIKLEDFFFDS I PPLP PP + 
Sbjct: 1   MDSSDEFLTIEFITQFLLGDFSDHQTHFPTDSPFLHPIKLEDFFFDSPI-PPLPPPPEI- 60

Query: 61  AEGSDNETKSSEVV--HPSLPKTDMSGQVC--HVKAEDAVAGATGEKV-KKHFRGVRRRP 120
              SDN+TK    V    + P  DMS Q C   + A+ +V  A+G K  ++HFRGVRRRP
Sbjct: 61  ---SDNDTKKPRKVVDQSTTPDPDMSTQACGAELAAKVSVVEASGGKAGRRHFRGVRRRP 120

Query: 121 WGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPA 180
           WGKFAAEIRDP RKGSRVWLGTYDSD+DAAKAYDCAAFRLRGRKAILNFPLEAGEPDPP 
Sbjct: 121 WGKFAAEIRDPTRKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPT 180

Query: 181 VANSKRGR-QKWTNVRKGLMAMNEK 200
            A+ KRGR QKW N+ K LMA NEK
Sbjct: 181 AADRKRGRGQKWRNIPKALMATNEK 200

[Close]

BLAST of CmoCh04G003790 vs. NCBI nr
Match: XP_022942649.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita moschata])

HSP 1 Score: 408.3 bits (1048), Expect = 3.8e-110
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP
Sbjct: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60

Query: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA 120
           AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA
Sbjct: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA 120

Query: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180
           AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK
Sbjct: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180

Query: 181 RGRQKWTNVRKGLMAMNEK 200
           RGRQKWTNVRKGLMAMNEK
Sbjct: 181 RGRQKWTNVRKGLMAMNEK 199

[Close]

BLAST of CmoCh04G003790 vs. NCBI nr
Match: KAG6600197.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 399.1 bits (1024), Expect = 2.3e-107
Identity = 197/199 (98.99%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITP  PLPPPVP
Sbjct: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITP--PLPPPVP 60

Query: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA 120
           AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA
Sbjct: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA 120

Query: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180
           AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK
Sbjct: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180

Query: 181 RGRQKWTNVRKGLMAMNEK 200
           RGRQKWTNVRKGLMAMNEK
Sbjct: 181 RGRQKWTNVRKGLMAMNEK 197

[Close]

BLAST of CmoCh04G003790 vs. NCBI nr
Match: KAG7030859.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396.7 bits (1018), Expect = 1.1e-106
Identity = 196/199 (98.49%), Postives = 196/199 (98.49%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITP  PLPPPVP
Sbjct: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITP--PLPPPVP 60

Query: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA 120
           AEGSDNETKSSEVVHPSLPK DMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA
Sbjct: 61  AEGSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA 120

Query: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180
           AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK
Sbjct: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180

Query: 181 RGRQKWTNVRKGLMAMNEK 200
           RGRQKWTNVRKGLMAMNEK
Sbjct: 181 RGRQKWTNVRKGLMAMNEK 197

[Close]

BLAST of CmoCh04G003790 vs. NCBI nr
Match: XP_023550767.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.2 bits (1014), Expect = 3.3e-106
Identity = 195/199 (97.99%), Postives = 195/199 (97.99%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITP  PLPPPVP
Sbjct: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITP--PLPPPVP 60

Query: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA 120
           AEGSDNETKSSEVVHPSLPK DMSGQVCHVKAEDAVAG TGEKVKKHFRGVRRRPWGKFA
Sbjct: 61  AEGSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGTTGEKVKKHFRGVRRRPWGKFA 120

Query: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180
           AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK
Sbjct: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180

Query: 181 RGRQKWTNVRKGLMAMNEK 200
           RGRQKWTNVRKGLMAMNEK
Sbjct: 181 RGRQKWTNVRKGLMAMNEK 197

[Close]

BLAST of CmoCh04G003790 vs. NCBI nr
Match: XP_022989373.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita maxima])

HSP 1 Score: 382.5 bits (981), Expect = 2.2e-102
Identity = 190/199 (95.48%), Postives = 190/199 (95.48%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQIT      PPVP
Sbjct: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQIT------PPVP 60

Query: 61  AEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFA 120
           AE SDNETKSSEVVHPSLPK DMSGQVCHVKAEDAVAG TGEKVKKHFRGVRRRPWGKFA
Sbjct: 61  AERSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGVTGEKVKKHFRGVRRRPWGKFA 120

Query: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180
           AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK
Sbjct: 121 AEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAVANSK 180

Query: 181 RGRQKWTNVRKGLMAMNEK 200
           RGRQKWTNVRKGLMAMNEK
Sbjct: 181 RGRQKWTNVRKGLMAMNEK 193

[Close]

BLAST of CmoCh04G003790 vs. TAIR 10
Match: AT5G07580.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 2.0e-32
Identity = 82/189 (43.39%), Postives = 112/189 (59.26%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSL---DHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPP 60
           MAS EE  ++E I   LL D L        F+ D+SF+  +    +  +  +    P  P
Sbjct: 68  MASFEESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGL----WCIEPHVPKQEPDSP 127

Query: 61  PVPAEGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGA---TGEKVKKHFRGVRRR 120
            +  +   NE    E    S    +++      + + +V  A     E   +H+RGVRRR
Sbjct: 128 VLDPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRR 187

Query: 121 PWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPP 180
           PWGKFAAEIRDP +KGSR+WLGT++SDVDAA+AYDCAAF+LRGRKA+LNFPL+AG+ + P
Sbjct: 188 PWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEAP 247

Query: 181 AVANSKRGR 184
           A +  KR R
Sbjct: 248 ANSGRKRKR 252

[Close]

BLAST of CmoCh04G003790 vs. TAIR 10
Match: AT5G61590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 4.6e-29
Identity = 69/155 (44.52%), Postives = 95/155 (61.29%), Query Frame = 0


Query: 40  LEDFFFDS--------QITPPLPLPPPVPAEG-SDNETKSSEVVHPSLPKTDMSGQVCHV 99
           +EDF FD          + P  P+P   P+    D ++   E++      +  S      
Sbjct: 28  IEDFVFDDTAFVSGLWSLEPFNPVPKLEPSSPVLDPDSYVQEILQMEAESSSSSSTTTSP 87

Query: 100 KAEDAVAGATGEKVK--KHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAY 159
           + E        ++ +  +H+RGVRRRPWGKFAAEIRDP +KGSR+WLGT++SD+DAA+AY
Sbjct: 88  EVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAY 147

Query: 160 DCAAFRLRGRKAILNFPLEAGEPDPPAVANSKRGR 184
           D AAF+LRGRKA+LNFPL+AG+ D P  +  KR R
Sbjct: 148 DYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRR 182

[Close]

BLAST of CmoCh04G003790 vs. TAIR 10
Match: AT5G47230.1 (ethylene responsive element binding factor 5 )

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 68/147 (46.26%), Postives = 89/147 (60.54%), Query Frame = 0


Query: 43  FFFDSQIT-PPLPLPPPVPAEGSDNETKSSEVVHP----SLPKTDMSGQVCHVKAEDAVA 102
           F FDS+++       P    +        S++  P    SLP      Q      +  V 
Sbjct: 86  FEFDSEVSVSDFDFKPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVT 145

Query: 103 GATGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRG 162
               E+ KKH+RGVR+RPWGKFAAEIRDPN++GSRVWLGT+D+ ++AA+AYD AAFRLRG
Sbjct: 146 KPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRG 205

Query: 163 RKAILNFPLEAGEPDPPAVANSKRGRQ 185
            KAILNFPLE G+  P A    K+ ++
Sbjct: 206 SKAILNFPLEVGKWKPRADEGEKKRKR 232

[Close]

BLAST of CmoCh04G003790 vs. TAIR 10
Match: AT5G61600.1 (ethylene response factor 104 )

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 78/168 (46.43%), Postives = 101/168 (60.12%), Query Frame = 0


Query: 1   MASLEEFFNIEFITQFLLGDSLDHQTHFETDSSFLHPIKLEDFFFDSQITPPLPLPPPVP 60
           MA+ +E   I+FI+Q LL D +      ETD   L   +L +F  +   T P  +    P
Sbjct: 1   MATKQEALAIDFISQHLLTDFVS----METDHPSLFTNQLHNFHSE---TGPRTITNQSP 60

Query: 61  AEGSD-NETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKF 120
              S  N+ K      P LP   +S  V   K E        E+ ++H+RGVRRRPWGK+
Sbjct: 61  KPNSTLNQRK------PPLPNLSVSRTV-STKTEK-------EEEERHYRGVRRRPWGKY 120

Query: 121 AAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLE 168
           AAEIRDPN+KG R+WLGTYD+ V+A +AYD AAF+LRGRKAILNFPL+
Sbjct: 121 AAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLD 147

[Close]

BLAST of CmoCh04G003790 vs. TAIR 10
Match: AT5G51190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-25
Identity = 52/79 (65.82%), Postives = 64/79 (81.01%), Query Frame = 0


Query: 92  AEDAVAGATGEKVKKHFRGVRRRPWGKFAAEIRDPNRKGSRVWLGTYDSDVDAAKAYDCA 151
           A    A    E  ++H+RGVRRRPWGK+AAEIRDPN+KG RVWLGT+D+ ++AA+ YD A
Sbjct: 56  AVPTTAPVVQENDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKA 115

Query: 152 AFRLRGRKAILNFPLEAGE 171
           AF+LRG KAILNFPLEAG+
Sbjct: 116 AFKLRGSKAILNFPLEAGK 134

The following BLAST results are available for this feature:

BLAST of CmoCh04G003790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LY05	2.8e-31	43.39	Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FKG2	6.5e-28	44.52	Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80341	1.6e-26	46.26	Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9FKG1	1.6e-26	46.43	Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q40478	5.1e-25	64.29	Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 ...	[more]

BLAST of CmoCh04G003790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FRX9	1.8e-110	100.00	ethylene-responsive transcription factor ERF106-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1JQ29	1.1e-102	95.48	ethylene-responsive transcription factor ERF106-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1E4I8	1.3e-71	72.77	ethylene-responsive transcription factor ERF106-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1JBI6	8.4e-71	72.28	ethylene-responsive transcription factor ERF106-like OS=Cucurbita maxima OX=3661...	[more]
A0A5A7TMF8	3.0e-68	70.24	Ethylene-responsive transcription factor ERF106 OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of CmoCh04G003790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942649.1	3.8e-110	100.00	ethylene-responsive transcription factor ERF106-like [Cucurbita moschata]	[more]
KAG6600197.1	2.3e-107	98.99	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
KAG7030859.1	1.1e-106	98.49	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023550767.1	3.3e-106	97.99	ethylene-responsive transcription factor ERF106-like [Cucurbita pepo subsp. pepo...	[more]
XP_022989373.1	2.2e-102	95.48	ethylene-responsive transcription factor ERF106-like [Cucurbita maxima]	[more]

BLAST of CmoCh04G003790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07580.1	2.0e-32	43.39	Integrase-type DNA-binding superfamily protein	[more]
AT5G61590.1	4.6e-29	44.52	Integrase-type DNA-binding superfamily protein	[more]
AT5G47230.1	1.1e-27	46.26	ethylene responsive element binding factor 5	[more]
AT5G61600.1	1.1e-27	46.43	ethylene response factor 104	[more]
AT5G51190.1	1.1e-25	65.82	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 108..119 score: 66.97 coord: 147..167 score: 58.18
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 107..171 e-value: 6.9E-34 score: 128.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 107..157 e-value: 6.6E-14 score: 51.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 107..165 score: 23.880728
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 106..165 e-value: 5.35804E-28 score: 98.1126
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 106..167 e-value: 6.0E-27 score: 95.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..78
None	No IPR available	PANTHER	PTHR31677:SF112	DNA BINDING PROTEIN	coord: 9..176
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 9..176
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 107..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G003790.1	CmoCh04G003790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity