CmoCh04G003560 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGACACAGTGGATAAACTGGTGATCTTCTTAGCCAAAAGAGATGGCATAGACAAGCTTGTCAAGACCTTCCAATATGTCTCCAAGTTGGTTCACTGGCACCTTGAAACCTCTCATCCAGACAAGGCAACCAGAGCCAAGAACTGGGAACTTGCTTCCGGCATCAGCCGAAAAGCCTTCCGAACCGGCCGTTTCTTGACCGGCTTCAACGCCCTCCGACGCAGCCCTGGCTCGACCCCAACGTTCCGGTTTCTCGCCGTTCTCTCTAATGCAGGTGAAATGGTCTATTTCTTCTTTGACCACTTGCTTTGGCTCTCAAGAATTGGGACTCTTGATGCAACGTTGGCTAAAAAGATGAGCTTCATATCAGCCTTTGGTGAGTCCTTTGGCTACATATTCTTCATAGTTGCTGATCTGATTATGCTGAAACAAGGGATTGAGGCTGAGAGAAAGCTTCAAAGCTCTGAAGCAGAGGATTCAAAACGGGAGAATGTGAAGAAAATCAGAGGTGATAGAGTTATGAGGCTCATGGCAGTGGCAGCTAATGTTGCTGATTTGCTTATCGCATTGGCTGAGATTGAACCCAATCCATTCTGCAACCATACCATCACTCTTGGGATTAGTGGGTTGGTCTCTGCTTGGGCTGGTTGGTATAGAAATTGGCCCTCATAGGATGAACCTTAACCTACATTCTTAGCCCTTCATGGTTCATCCATTACGCCCATTTTGTATCCATACTTCCAAAAACGTTTGCTTTAATCCTCATATTTCGATCAAAAGTCTGTGTCCATAGTTTTCGTAAAAGGGTTTAATCCTCGTCTTCGAATCGACTTCTTAATTCTCTTAAAAATAGGAACTTTTACGACGATCGGTATTGTTTCCGCTATATTTCACAACTTTCTAATTTAAAATCTTCTTAAAATTCTCGATAACCAAAATTAAATTATAAGATGCAATCTTTTGTAATCGATAACATTATACGTACTATGAATAAGAATTAAAGAATTAAAGATTGAAATAAAATGAAATTTATACCTTAAATCCCACGAATTGTACACAATAATTGTAAATATATTATTTGGATCCATGATAATATTTTAAAACTGAACTTAAAATTTAAACTAATTTTGTTTCCATATAATAAAAAAATCGAATCTTTTCCAAAAATGGTTACACGAAACATAATCCGGGCGGTTCGGGGAAGTTTTATCTACCCATTACCCACCCATTTCAGTATTTCACAGTACAAAACAAACGCATCGAATTTGATTACTGCGGCTATGGCTTATATCCGTTTCTTCTAGTCCGGGGAAGATTTCGGGTCGGTTGACTCTTCAAGTTCACTAAATCTTGAAGGCGAAATCAGATCTTCGCTGATTTTGCGAAGCGTCTCCGGATTTGTTGGGCGAGTTGATTTTTCTGCAGCGGTCGGTAAGAATTGTGTATATTTTTCTGTTTTGTTGATCTTTGCAATTTTTTTAGTCCCAGGAAAGGATTGGTAGAAGAGGTCGATTTTTTTTCTTTTCTCCTAGGTTTGATTCTTATAAATCGTTTCTTCCGTTGTCGAACTGTTCAATGTCTTTGAAATGATGGGAAATTGTTGGATTTGGATTCGAGAAATAAGATGTGGAGTTCTTGATTTGTTGATTTTTTTTTGTCGGTGGACGATCTCAGATGGGGGATGGGGCGGCGCCTTCTCGGTATGTGAAATTGACGAAAGATCAAGCGCCCTTGGAAGAAATCAAGCCAGGGGAGCTTAATCAGCCCATTGAAGTTCCTCAGGTTTTCTACTTTTCTAGGAGCAATTTTTGCCGCTGTTTCTTTCTCATAATACCTCTCTGTAGATTCGAGCTTTGCTGTTGATATCATTGGTATTTGTTCTTCCGGTTTACAATGTCCAGAGCATATATGCATATCACTTCACGATCTGGTAGTATTGTTTGTTGATCCAATTATGAGAAGATTCACTTGTAGTGGATGAACTGCTCTAGAAGTTGTGCATTTCGATGTTTTTTACACCAAATGTTGTAGGGTGAAGCTTTTATTTAATAAGGTTAGTAAATGTTAAACGATTGGGGGTGGCTAAAACTCGACGATGTTCTCACCGTGCCTGTTTATTGTGTGTTAACAATGTGCTAGTGCAACATCCCAAGCCCACCGCAAGCAGATATTGTTCTTTTTAGGCTTTCTCTTCTGGGCTTTCCCTCAAGGTTTTAAAACGCGTTAGGGAGAGGTTTCCACGCCCTTGTAAAGCATGTTTCGTTCCCATCTCCAACCGATGTAGGATCTCACAGCTAGCTACATGCATACCTGTTAAGCTGTTTGTATGCTAGGAGTTGTTAGGTTGTTGAAGTGGTGACTGTAGAGAAATACTCGATTGAAGCTTCAAGCGCCTTGTTGGCCCGTTTTATCTGATATTGACCTTTTTTGACCTGTGCTCGTGTCTTCCATTACTCTGGGACATTTTTTGTTTTCTTGATTTGCAGCTGCTCGACCTTTTCTATATGCATACTATGTGTAATTTATGGAATTTTGGTAGTAACTTTCTGTAGGAATATCCAAGGGAAAACTAAAAAAACATGCCATTTATAATGAAATTCTCTTGATTACTCTCAGTTAAATGTTCGAAAATGCAATGAGTGTGGACAGCCACTCCCTGACAGCTTTGAACCTCCAGCAGATGAACCTTGGACAACTGGGATTTTTGGCTGTGCTGAAGATCCACAAAGTTGTAAGTTTCCATATGTATAGTATTCTTCTTAATCTACGGTTCTCAGGTCGAATAACGGTGAACAGCTTTGCAATATGATAATTGTTTGTTTGTTCGTGCGATTATTCGTAGAACTAAGGGTTATCAGAAACACATTTTGAAAGTTGAAACTTATGCAATTATGCCATTAGCACTACTCATTTCAAGGTCTGCAAGAGCAAGCTGTTGTCGTAACTTGTTTTTGTCTTCGTACGTGTGCCTATTTCGTGTATACAGGCTGGACTGGATTGTTCTGTCCATGTGTTTTGTTTGGGCGCAATGTTGAAAGCTTGAGAGACGATGATATGGACTGGACAAGGCCGTGCGTTTGTCATGCTATATTTGTTGAAGGTGGCATTGCCTTGGCGACAGCAACTGCAGCGTTCCATTGCATTGAACCAAACACGACGTTTCTCATTTGTGAGGGATTATTGTTTACCTGGTGGATGTGTGGTATATACACTGGACTCGTTCGCCAATCTTTGCAGAAGAAGTATCATCTTAAGGTAAATCTTCTATTAATGTGCTTATCAATCTTGATCTATTAAATGTGGACAATCTTCTGTGGGTTCGGACTCCGAAAATAGCTGGATGCCAACTTTTTTGCTTCACTTCTAGAATTGTTTGCCTTTTGTTTCTGTAGTTCCGAAAGCGTCATCTCGTATGTTTTGAGGAGAAAATCTCTGTTCGTAAAGAGGATTTTGTGGATCGCATTGGATATCTAGTTTAAAACTTTTTCATTCTCTTACGTTGATATGTCAACTCGTTCAAGCCCGAAAAATATTAATATATTTTTGTAACAGCCAAAGCTCGCTAGGAGATATTTTCTCTTTGGGTAGGTTTTCACACCTTTATAAAGAATGCTTCGTTCTCCTCTCCAACCAACGTGAGTTTTCACAATCCACCCACCTTCAGGGCCCAGCGTCCTCGCTGACACTCATTTCTCTCTCCAATCGACGTGGGATCCCACAACCCACCCAGACCCAGCGTCTTCACTGACACTCGTTTCTCTCTCCAATCGATGTAGGATCTTACAATCCACTCCCTCCGGGGGATGACCCAAGTGTTCTCAATGACACTCGTCCTCTCTCCAATCGATGTGGGATCTCACAATTCATCCCTTTGGGGCCAGCATCCTCGCTGACACACTGCCCGGTGTCTGGCTCTAATACCACTTGAAACTGTCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGAGCTTTTCCCTTTCGGGATTCCTCTCAAGGTTTTTAAAACATCTCTATTAGGGGGAAGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCCTATGAGATTTCACAATTTTCCTATAATTGTCATGCATTGGAGTATTGGCCCGGAGGTTGAAAGAATAACATTACTCCGTGGGGGGCACTTCGAAGAGCTCGATGTGCCCATACTGTCTATATAGCAAGGGGCTAAGGGTGAGAGAAGAGACAGGATCTCAAGTTACGCTAGAGAAACTCATATCATGGGGCGTCACATAGGATTTAGAACAACCATTCCCCCTTCTTTAAACAAATGTGTGGTTAGTTAGCTTTCCAAAACTGAGTACTGTCATATGCTAGTGTAGTGTAGTACATGCTGTATGCTAATCGTTGCAGTGCTGATTGCAGAACTCCCCATGTGATCCTTGCATGACACATTGCTGCCTGCACTGGTGCGCTCTTTGTCAAGAACACAGGGAGATGAAGGGACGTCTAGCCGATAACTTCGCAGTCCCAATGACTATCGTGAACCCGCCACCCGTTCAAGAAATGAAGTCGGAAAACGAAGGTGA ATGACTGACACAGTGGATAAACTGGTGATCTTCTTAGCCAAAAGAGATGGCATAGACAAGCTTGTCAAGACCTTCCAATATGTCTCCAAGTTGGTTCACTGGCACCTTGAAACCTCTCATCCAGACAAGGCAACCAGAGCCAAGAACTGGGAACTTGCTTCCGGCATCAGCCGAAAAGCCTTCCGAACCGGCCGTTTCTTGACCGGCTTCAACGCCCTCCGACGCAGCCCTGGCTCGACCCCAACGTTCCGGTTTCTCGCCGTTCTCTCTAATGCAGGTGAAATGGTCTATTTCTTCTTTGACCACTTGCTTTGGCTCTCAAGAATTGGGACTCTTGATGCAACGTTGGCTAAAAAGATGAGCTTCATATCAGCCTTTGGTGAGTCCTTTGGCTACATATTCTTCATAGTTGCTGATCTGATTATGCTGAAACAAGGGATTGAGGCTGAGAGAAAGCTTCAAAGCTCTGAAGCAGAGGATTCAAAACGGGAGAATGTGAAGAAAATCAGAGGTGATAGAGTTATGAGGCTCATGGCAGTGGCAGCTAATGTTGCTGATTTGCTTATCGCATTGGCTGAGATTGAACCCAATCCATTCTGCAACCATACCATCACTCTTGGGATTAGTGGGTTGGTCTCTGCTTGGGCTGCGTCTCCGGATTTGTTGGGCGAGTTGATTTTTCTGCAGCGGTCGATGGGGGATGGGGCGGCGCCTTCTCGGTATGTGAAATTGACGAAAGATCAAGCGCCCTTGGAAGAAATCAAGCCAGGGGAGCTTAATCAGCCCATTGAAGTTCCTCAGTTAAATGTTCGAAAATGCAATGAGTGTGGACAGCCACTCCCTGACAGCTTTGAACCTCCAGCAGATGAACCTTGGACAACTGGGATTTTTGGCTGTGCTGAAGATCCACAAAGTTGCTGGACTGGATTGTTCTGTCCATGTGTTTTGTTTGGGCGCAATGTTGAAAGCTTGAGAGACGATGATATGGACTGGACAAGGCCGTGCGTTTGTCATGCTATATTTGTTGAAGGTGGCATTGCCTTGGCGACAGCAACTGCAGCGTTCCATTGCATTGAACCAAACACGACGTTTCTCATTTGTGAGGGATTATTGTTTACCTGGTGGATGTGTGGTATATACACTGGACTCGTTCGCCAATCTTTGCAGAAGAAGTATCATCTTAAGAACTCCCCATGTGATCCTTGCATGACACATTGCTGCCTGCACTGTCCCAATGACTATCGTGAACCCGCCACCCGTTCAAGAAATGAAGTCGGAAAACGAAGGTGA ATGACTGACACAGTGGATAAACTGGTGATCTTCTTAGCCAAAAGAGATGGCATAGACAAGCTTGTCAAGACCTTCCAATATGTCTCCAAGTTGGTTCACTGGCACCTTGAAACCTCTCATCCAGACAAGGCAACCAGAGCCAAGAACTGGGAACTTGCTTCCGGCATCAGCCGAAAAGCCTTCCGAACCGGCCGTTTCTTGACCGGCTTCAACGCCCTCCGACGCAGCCCTGGCTCGACCCCAACGTTCCGGTTTCTCGCCGTTCTCTCTAATGCAGGTGAAATGGTCTATTTCTTCTTTGACCACTTGCTTTGGCTCTCAAGAATTGGGACTCTTGATGCAACGTTGGCTAAAAAGATGAGCTTCATATCAGCCTTTGGTGAGTCCTTTGGCTACATATTCTTCATAGTTGCTGATCTGATTATGCTGAAACAAGGGATTGAGGCTGAGAGAAAGCTTCAAAGCTCTGAAGCAGAGGATTCAAAACGGGAGAATGTGAAGAAAATCAGAGGTGATAGAGTTATGAGGCTCATGGCAGTGGCAGCTAATGTTGCTGATTTGCTTATCGCATTGGCTGAGATTGAACCCAATCCATTCTGCAACCATACCATCACTCTTGGGATTAGTGGGTTGGTCTCTGCTTGGGCTGCGTCTCCGGATTTGTTGGGCGAGTTGATTTTTCTGCAGCGGTCGATGGGGGATGGGGCGGCGCCTTCTCGGTATGTGAAATTGACGAAAGATCAAGCGCCCTTGGAAGAAATCAAGCCAGGGGAGCTTAATCAGCCCATTGAAGTTCCTCAGTTAAATGTTCGAAAATGCAATGAGTGTGGACAGCCACTCCCTGACAGCTTTGAACCTCCAGCAGATGAACCTTGGACAACTGGGATTTTTGGCTGTGCTGAAGATCCACAAAGTTGCTGGACTGGATTGTTCTGTCCATGTGTTTTGTTTGGGCGCAATGTTGAAAGCTTGAGAGACGATGATATGGACTGGACAAGGCCGTGCGTTTGTCATGCTATATTTGTTGAAGGTGGCATTGCCTTGGCGACAGCAACTGCAGCGTTCCATTGCATTGAACCAAACACGACGTTTCTCATTTGTGAGGGATTATTGTTTACCTGGTGGATGTGTGGTATATACACTGGACTCGTTCGCCAATCTTTGCAGAAGAAGTATCATCTTAAGAACTCCCCATGTGATCCTTGCATGACACATTGCTGCCTGCACTGTCCCAATGACTATCGTGAACCCGCCACCCGTTCAAGAAATGAAGTCGGAAAACGAAGGTGA MTDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHLETSHPDKATRAKNWELASGISRKAFRTGRFLTGFNALRRSPGSTPTFRFLAVLSNAGEMVYFFFDHLLWLSRIGTLDATLAKKMSFISAFGESFGYIFFIVADLIMLKQGIEAERKLQSSEAEDSKRENVKKIRGDRVMRLMAVAANVADLLIALAEIEPNPFCNHTITLGISGLVSAWAASPDLLGELIFLQRSMGDGAAPSRYVKLTKDQAPLEEIKPGELNQPIEVPQLNVRKCNECGQPLPDSFEPPADEPWTTGIFGCAEDPQSCWTGLFCPCVLFGRNVESLRDDDMDWTRPCVCHAIFVEGGIALATATAAFHCIEPNTTFLICEGLLFTWWMCGIYTGLVRQSLQKKYHLKNSPCDPCMTHCCLHCPNDYREPATRSRNEVGKRR Homology
BLAST of CmoCh04G003560 vs. ExPASy Swiss-Prot
Match: Q9STY0 (Peroxisomal membrane protein 11B OS=Arabidopsis thaliana OX=3702 GN=PEX11B PE=1 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 1.9e-85 Identity = 159/216 (73.61%), Postives = 184/216 (85.19%), Query Frame = 0
BLAST of CmoCh04G003560 vs. ExPASy Swiss-Prot
Match: Q01IH3 (Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. indica OX=39946 GN=PEX11-4 PE=2 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 9.8e-82 Identity = 155/214 (72.43%), Postives = 177/214 (82.71%), Query Frame = 0
BLAST of CmoCh04G003560 vs. ExPASy Swiss-Prot
Match: Q7XU74 (Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. japonica OX=39947 GN=PEX11-4 PE=2 SV=2) HSP 1 Score: 305.4 bits (781), Expect = 9.8e-82 Identity = 155/214 (72.43%), Postives = 177/214 (82.71%), Query Frame = 0
BLAST of CmoCh04G003560 vs. ExPASy Swiss-Prot
Match: B6SGC5 (Cell number regulator 6 OS=Zea mays OX=4577 GN=CNR6 PE=2 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 9.2e-80 Identity = 132/187 (70.59%), Postives = 157/187 (83.96%), Query Frame = 0
BLAST of CmoCh04G003560 vs. ExPASy Swiss-Prot
Match: A2XFQ8 (Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. indica OX=39946 GN=PEX11-3 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 9.7e-21 Identity = 65/205 (31.71%), Postives = 117/205 (57.07%), Query Frame = 0
BLAST of CmoCh04G003560 vs. ExPASy TrEMBL
Match: A0A5J5BAV3 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_026491 PE=3 SV=1) HSP 1 Score: 666.4 bits (1718), Expect = 8.1e-188 Identity = 317/421 (75.30%), Postives = 359/421 (85.27%), Query Frame = 0
BLAST of CmoCh04G003560 vs. ExPASy TrEMBL
Match: A0A498KM83 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_022740 PE=3 SV=1) HSP 1 Score: 657.9 bits (1696), Expect = 2.9e-185 Identity = 313/411 (76.16%), Postives = 352/411 (85.64%), Query Frame = 0
BLAST of CmoCh04G003560 vs. ExPASy TrEMBL
Match: A0A5N5NBB5 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_004412 PE=3 SV=1) HSP 1 Score: 642.1 bits (1655), Expect = 1.6e-180 Identity = 313/448 (69.87%), Postives = 352/448 (78.57%), Query Frame = 0
BLAST of CmoCh04G003560 vs. ExPASy TrEMBL
Match: A0A6A1VGD6 (Peroxisomal membrane protein 11-4 OS=Morella rubra OX=262757 GN=CJ030_MR6G019741 PE=3 SV=1) HSP 1 Score: 561.6 bits (1446), Expect = 2.8e-156 Identity = 310/570 (54.39%), Postives = 360/570 (63.16%), Query Frame = 0
BLAST of CmoCh04G003560 vs. ExPASy TrEMBL
Match: A0A6A4MG10 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_03089 PE=3 SV=1) HSP 1 Score: 545.8 bits (1405), Expect = 1.6e-151 Identity = 269/413 (65.13%), Postives = 326/413 (78.93%), Query Frame = 0
BLAST of CmoCh04G003560 vs. NCBI nr
Match: KAG6600175.1 (Cell number regulator 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 847.8 bits (2189), Expect = 4.1e-242 Identity = 409/409 (100.00%), Postives = 409/409 (100.00%), Query Frame = 0
BLAST of CmoCh04G003560 vs. NCBI nr
Match: KAA8539799.1 (hypothetical protein F0562_026491 [Nyssa sinensis]) HSP 1 Score: 666.4 bits (1718), Expect = 1.7e-187 Identity = 317/421 (75.30%), Postives = 359/421 (85.27%), Query Frame = 0
BLAST of CmoCh04G003560 vs. NCBI nr
Match: RXI08596.1 (hypothetical protein DVH24_022740 [Malus domestica]) HSP 1 Score: 657.9 bits (1696), Expect = 5.9e-185 Identity = 313/411 (76.16%), Postives = 352/411 (85.64%), Query Frame = 0
BLAST of CmoCh04G003560 vs. NCBI nr
Match: KAF9858343.1 (hypothetical protein H0E87_028648 [Populus deltoides]) HSP 1 Score: 657.1 bits (1694), Expect = 1.0e-184 Identity = 317/421 (75.30%), Postives = 355/421 (84.32%), Query Frame = 0
BLAST of CmoCh04G003560 vs. NCBI nr
Match: KAB5564358.1 (hypothetical protein DKX38_004412 [Salix brachista]) HSP 1 Score: 642.1 bits (1655), Expect = 3.4e-180 Identity = 313/448 (69.87%), Postives = 352/448 (78.57%), Query Frame = 0
BLAST of CmoCh04G003560 vs. TAIR 10
Match: AT3G47430.1 (peroxin 11B ) HSP 1 Score: 317.8 bits (813), Expect = 1.4e-86 Identity = 159/216 (73.61%), Postives = 184/216 (85.19%), Query Frame = 0
BLAST of CmoCh04G003560 vs. TAIR 10
Match: AT2G45010.1 (PLAC8 family protein ) HSP 1 Score: 293.1 bits (749), Expect = 3.6e-79 Identity = 131/180 (72.78%), Postives = 153/180 (85.00%), Query Frame = 0
BLAST of CmoCh04G003560 vs. TAIR 10
Match: AT5G51400.1 (PLAC8 family protein ) HSP 1 Score: 285.0 bits (728), Expect = 9.8e-77 Identity = 123/178 (69.10%), Postives = 143/178 (80.34%), Query Frame = 0
BLAST of CmoCh04G003560 vs. TAIR 10
Match: AT2G45010.2 (PLAC8 family protein ) HSP 1 Score: 224.2 bits (570), Expect = 2.0e-58 Identity = 95/133 (71.43%), Postives = 113/133 (84.96%), Query Frame = 0
BLAST of CmoCh04G003560 vs. TAIR 10
Match: AT1G47750.1 (peroxin 11A ) HSP 1 Score: 94.4 bits (233), Expect = 2.4e-19 Identity = 62/201 (30.85%), Postives = 111/201 (55.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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