CmoCh04G003100 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G003100
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionprotein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1
LocationCmo_Chr04: 1541830 .. 1544265 (-)
RNA-Seq ExpressionCmoCh04G003100
SyntenyCmoCh04G003100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCGGGTGCTCTACGGTTGTGCTCTTGTCTTGGTTTCTCCCGCCAAGATCTCATGTTTTAACGGTCTTCTTCATCCAACATTTTGTCCTTTCCCTTCTCGTGTAACCTTCGTCAATTGTAACTTAACTTTGTCCGTCGGTTACAGAAGCAATCCGATCGTGGCCGAGTATGTATGCCTAGATCCGATAGCGGAATTTGTAGTAGTCGTAAGTTTTTCTTTCCAATATAGCGCTTTATCTGCTCAAATTGATTCCGGTTTTGCGTTGATTTATATGTTTGGTTGTTTTTGGGAGGAAACCCAGAGATTTAAGGAGTAGGTGTCGGAGAAGCTAGCGAAGGATCGTGAGACGATTGTGGAGGTTTGCTCGAAGTTTATTGTTTTTTATTGATTTTCGAAACTTTTAGGTTGAAAATGTTGTGATTCGTTCGTTGGGTGATTTGAATTTTGGATGCCCTTGTTTTGGGTTGAAGAATATGTCTGAGCAGCTACCTGTTTGAGAAAATTTGTGAATGAGGCGACTGTTTGATTGCAGAGTTATTTGAGTTTTTTTGTGCTTTTGAGTTATCATGGCTTGAGAATTATTTCCCATAGGTTCAATAATTAAGCCCTGAGAAAACATCGGACCTGCCAATATAGCTACAGAACTAGTACTGTTTCCAAGACAGCTTCCATTAATTGCGCAGAAATTTTCTGAATGTTTGACCAGTGCTGCCATTATTGATATGCTTCTTGTATTTTGATTTTTCAAATCAAAACTGAAATGAAGATTCCAATTTGAATTCAGTTGTCCGAATTTATGTGATAGTCTTAACATGAAAGTATGTACTTCCAAGTTGTAATATCAGATATTTGGTGAATATTGCATGTGGAGTACGGAGGTTCTGGGACATTATTGGTGGAGCCTTTCACCCAAAATGGTTATTGCTCTCAATGAGGGGAAACTACCAGGAGCGCCATTTGCCTCAAGAACTTCGATCCTTTCAGCTCAAAATCATCTAGTTCATGATTGGAATTCGAAAAGAGGGCTTAAATGATCTGTTTTTTCTAGTTACATTTGTGAAGATCCTTGTATTTTGTATTGAGATTTTCTGTTCTTTTTGTTGTTGCAGGCAGATGATGAAGGAAAAGCTGTATGCTTCATCACAAAGATTCTCCAATACAGTGTCAATTCCATTGATATCTTTGTTGCTATACACATGACTTATTTCTCTCAATACATGAATCATTCTGGGGCTGTGGTTTTACACTGAATTGGAAATTTGGATGCTCATTTTCATGCTCTATATGAATCTTCTAACTTCCACAATGAGCATCTTAAATCAAGCTCCACTATTCTGTCGTATCAACCACACTTGCTTGTCATGATCAAGAACAAAGGGTTGAACATAAAATCAGCTGGCAGCTTCAGAAATGCTCTGCAATGATGGTCTCCAAGCCTTTGGCCTCGCTGCAGTGGCGTTTGCTGCTGGTGTTCTGATGCGATGTCTTTCATGTTTGACTACCTGCAATGTTTATTTCACAGAGATTATTGGTATGATTTTATCTTCAAAAAATCACTTCAAGTTGCCAAGGATCCCAATCACCATCATATTTGACTTTTTTCATTTTCTTTTGCAGTCATCTGCTGTGATTCAAAAGGAAACAAATCTGGTTACCTGCTGGCTATTTTCAGTCTCATCTCCGGCAGCCGGCTTCTCCGGCTTCCTCTCCGACTCCGGCAATTGCTTCTTGGATTTTGCATACTTTTTAGCTCGCAACACCTTTATAACCTCTGCAAATTCCAACAAAACGTCAAAAGGGCTGAACTAAAACAGAAGGAAATGAAAGAACTTCAAAAAGATCAAAGAGGCACCATACCCTGAGTAGTGACAAGCCGATAGGCATGGCCAAGAGCAAGAGTGTCATTTGGCCGGAGAAGCTTGACACGGGTAAACCGCACCGTTTTAGGCTCCCGATTATCTTCCTCAGATTGAGGCAAGGGAATTATAAGAGAAACATAGTGACCCGGATTAGTCCTCATGACTTCACTCGCCACCACCGGCCAATACAGCCTCTCAATCCGGCCAGTTGGATGCTGTATAACCAGAGCCGCCGCATCAACCGCCTGGCAATTCCCCATCTGAATGAATTCTGCAACTGATAGATAGATCGAAAGAAGAAGAAGAAGAAGAAGATGAAGATGAAGGAAATAAGTCTCTTTCTATACAGCTTCTGTGCTCGCCAAATGGGTCTACTTAGAAGTGCATGCCGTCCATTCATATATCTCACACTTTCCAACTAACTCAATGCAACGTGGGTCAAATTTATATCGAAAATTGACAATGTAACCCACGGAGATTAGAGCATTAAAAAAAAAATTACCTTTTTATACGTTCGATGATAAAAACTTAAAACTTTGTGATTTTGGCTTTTATTATTTTTCAATTAAAAC

mRNA sequence

ATGGGGCGGGTGCTCTACGGTTGTGCTCTTGTCTTGGTTTCTCCCGCCAAGATCTCATGTTTTAACGGTCTTCTTCATCCAACATTTTGTCCTTTCCCTTCTCGTGTAACCTTCGTCAATTGTAACTTAACTTTGTCCGTCGGTTACAGAAGCAATCCGATCGTGGCCGAGTATGTATGCCTAGATCCGATAGCGGAATTTGTAGTAGTCGTGTCGGAGAAGCTAGCGAAGGATCGTGAGACGATTGTGGAGGTTGAAAATGTTGTGATTCGTTCGTTGGGTGATTTGAATTTTGGATGCCCTTGTTTTGGGTTGAAGAATATGTCTGAGCAGCTACCTATATTTGGTGAATATTGCATGTGGAGTACGGAGGTTCTGGGACATTATTGGTGGAGCCTTTCACCCAAAATGGTTATTGCTCTCAATGAGGGGAAACTACCAGGAGCGCCATTTGCCTCAAGAACTTCGATCCTTTCAGCTCAAAATCATCTAGCAGATGATGAAGGAAAAGCTGTATGCTTCATCACAAAGATTCTCCAATACAGTGTCAATTCCATTGATATCTTTGTTGCTATACACATGACTTATTTCTCTCAATACATGAATCATTCTGGGGCTGTGCTGGCAGCTTCAGAAATGCTCTGCAATGATGGTCTCCAAGCCTTTGGCCTCGCTGCAGTGGCGTTTGCTGCTGTCATCTGCTGTGATTCAAAAGGAAACAAATCTGGTTACCTGCTGGCTATTTTCAGTCTCATCTCCGGCAGCCGGCTTCTCCGGCTTCCTCTCCGACTCCGGCAATTGCTTCTTGGATTTTGCATACTTTTTAGCTCGCAACACCTTTATAACCTCTGCAAATTCCAACAAAACGTCAAAAGGGCTGAACTAAAACAGAAGGAAATGAAAGAACTTCAAAAAGATCAAAGAGGCACCATACCCTGAGTAGTGACAAGCCGATAGGCATGGCCAAGAGCAAGAGTGTCATTTGGCCGGAGAAGCTTGACACGGGTAAACCGCACCGTTTTAGGCTCCCGATTATCTTCCTCAGATTGAGGCAAGGGAATTATAAGAGAAACATAGTGACCCGGATTAGTCCTCATGACTTCACTCGCCACCACCGGCCAATACAGCCTCTCAATCCGGCCAGTTGGATGCTGTATAACCAGAGCCGCCGCATCAACCGCCTGGCAATTCCCCATCTGAATGAATTCTGCAACTGATAGATAGATCGAAAGAAGAAGAAGAAGAAGAAGATGAAGATGAAGGAAATAAGTCTCTTTCTATACAGCTTCTGTGCTCGCCAAATGGGTCTACTTAGAAGTGCATGCCGTCCATTCATATATCTCACACTTTCCAACTAACTCAATGCAACGTGGGTCAAATTTATATCGAAAATTGACAATGTAACCCACGGAGATTAGAGCATTAAAAAAAAAATTACCTTTTTATACGTTCGATGATAAAAACTTAAAACTTTGTGATTTTGGCTTTTATTATTTTTCAATTAAAAC

Coding sequence (CDS)

ATGGGGCGGGTGCTCTACGGTTGTGCTCTTGTCTTGGTTTCTCCCGCCAAGATCTCATGTTTTAACGGTCTTCTTCATCCAACATTTTGTCCTTTCCCTTCTCGTGTAACCTTCGTCAATTGTAACTTAACTTTGTCCGTCGGTTACAGAAGCAATCCGATCGTGGCCGAGTATGTATGCCTAGATCCGATAGCGGAATTTGTAGTAGTCGTGTCGGAGAAGCTAGCGAAGGATCGTGAGACGATTGTGGAGGTTGAAAATGTTGTGATTCGTTCGTTGGGTGATTTGAATTTTGGATGCCCTTGTTTTGGGTTGAAGAATATGTCTGAGCAGCTACCTATATTTGGTGAATATTGCATGTGGAGTACGGAGGTTCTGGGACATTATTGGTGGAGCCTTTCACCCAAAATGGTTATTGCTCTCAATGAGGGGAAACTACCAGGAGCGCCATTTGCCTCAAGAACTTCGATCCTTTCAGCTCAAAATCATCTAGCAGATGATGAAGGAAAAGCTGTATGCTTCATCACAAAGATTCTCCAATACAGTGTCAATTCCATTGATATCTTTGTTGCTATACACATGACTTATTTCTCTCAATACATGAATCATTCTGGGGCTGTGCTGGCAGCTTCAGAAATGCTCTGCAATGATGGTCTCCAAGCCTTTGGCCTCGCTGCAGTGGCGTTTGCTGCTGTCATCTGCTGTGATTCAAAAGGAAACAAATCTGGTTACCTGCTGGCTATTTTCAGTCTCATCTCCGGCAGCCGGCTTCTCCGGCTTCCTCTCCGACTCCGGCAATTGCTTCTTGGATTTTGCATACTTTTTAGCTCGCAACACCTTTATAACCTCTGCAAATTCCAACAAAACGTCAAAAGGGCTGAACTAAAACAGAAGGAAATGAAAGAACTTCAAAAAGATCAAAGAGGCACCATACCCTGA

Protein sequence

MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSEKLAKDRETIVEVENVVIRSLGDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADDEGKAVCFITKILQYSVNSIDIFVAIHMTYFSQYMNHSGAVLAASEMLCNDGLQAFGLAAVAFAAVICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQLLLGFCILFSSQHLYNLCKFQQNVKRAELKQKEMKELQKDQRGTIP
Homology
BLAST of CmoCh04G003100 vs. ExPASy TrEMBL
Match: A0A6J1DB25 (protein PLASTID REDOX INSENSITIVE 2-like OS=Momordica charantia OX=3673 GN=LOC111019054 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-21
Identity = 81/177 (45.76%), Postives = 95/177 (53.67%), Query Frame = 0

Query: 5   LYGCALVLVS---PAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVC 64
           L+GCAL+L S   PAKI+CFNGLLHPTF PFPS V  FVNC  T S  YR+ P+  ++V 
Sbjct: 63  LHGCALLLASAVPPAKITCFNGLLHPTFSPFPSLVKPFVNCTSTSSFSYRATPLPPKFVY 122

Query: 65  LDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSLGDLNFGCPCFGLKNMSEQL 124
            DPI EF           +S+KLA+DR T             DL+F              
Sbjct: 123 PDPIPEFAEAETRKFREYLSKKLAEDRATFG----------NDLDFVVEVCS-------- 182

Query: 125 PIFGEYCMWSTEVLGHYWWSLSP--KMVIALNEGKLPGAPFASRTSILSAQNHLADD 168
            IFGEY     E  G     + P   M IALNE KLPGA  A+RTS+L AQNHL  D
Sbjct: 183 KIFGEYL--HVEYGGPETLLVEPFTNMFIALNERKLPGASLAARTSLLWAQNHLDQD 219

BLAST of CmoCh04G003100 vs. ExPASy TrEMBL
Match: A0A5A7SZ04 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00740 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.6e-21
Identity = 81/174 (46.55%), Postives = 95/174 (54.60%), Query Frame = 0

Query: 6   YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCL 65
           YGCALV    VSPAKI+ FNGL +PTF  FPS V   VNC LT SV YR+ PI A YV  
Sbjct: 4   YGCALVSAIEVSPAKITSFNGLHYPTFSLFPSFVKPLVNCTLTSSVIYRATPITASYVYP 63

Query: 66  DPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSLGDLNFGCPCFGLKNMSEQLP 125
           +PI EF  V        +S+KLAKDRET                FG     + ++  +  
Sbjct: 64  EPIPEFAEVETQKFKEQLSKKLAKDRET----------------FGNDFDSVVDVCSK-- 123

Query: 126 IFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD 168
           IFGEY        G         M IALNE KLPGAP A+RTS+L AQN+L +D
Sbjct: 124 IFGEYLHVEYGGPGTLIVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDND 159

BLAST of CmoCh04G003100 vs. ExPASy TrEMBL
Match: A0A1S3BEK8 (uncharacterized protein LOC103489034 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489034 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.6e-21
Identity = 81/174 (46.55%), Postives = 95/174 (54.60%), Query Frame = 0

Query: 6   YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCL 65
           YGCALV    VSPAKI+ FNGL +PTF  FPS V   VNC LT SV YR+ PI A YV  
Sbjct: 4   YGCALVSAIEVSPAKITSFNGLHYPTFSLFPSFVKPLVNCTLTSSVIYRATPITASYVYP 63

Query: 66  DPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSLGDLNFGCPCFGLKNMSEQLP 125
           +PI EF  V        +S+KLAKDRET                FG     + ++  +  
Sbjct: 64  EPIPEFAEVETQKFKEQLSKKLAKDRET----------------FGNDFDSVVDVCSK-- 123

Query: 126 IFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD 168
           IFGEY        G         M IALNE KLPGAP A+RTS+L AQN+L +D
Sbjct: 124 IFGEYLHVEYGGPGTLIVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDND 159

BLAST of CmoCh04G003100 vs. ExPASy TrEMBL
Match: A0A6J1JDH3 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485796 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.2e-17
Identity = 74/174 (42.53%), Postives = 85/174 (48.85%), Query Frame = 0

Query: 6   YGCALV---LVSPAKISCFNGLLHPTFCPFPS-RVTFVNCNLTLSVGYRSNPIVAEYVCL 65
           Y C LV    VSPAK +CFNGL +PTF P  S    FVNC LT S+ YR+ P  A  V  
Sbjct: 4   YSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSLGKPFVNCTLTSSIIYRATPATASCVYH 63

Query: 66  DPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSLGDLNFGCPCFGLKNMSEQLP 125
           DPI EF  V        +S+KLAKDRET     + V+                       
Sbjct: 64  DPIPEFAEVETRKFKEQLSKKLAKDRETFGNDLDSVVEVCS------------------K 123

Query: 126 IFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD 168
           IF EY        G         M IALNE KLPGAP A+RTS+L AQN+L  D
Sbjct: 124 IFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLATRTSLLWAQNYLDHD 159

BLAST of CmoCh04G003100 vs. ExPASy TrEMBL
Match: A0A6J1GYK9 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458359 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.8e-17
Identity = 74/177 (41.81%), Postives = 87/177 (49.15%), Query Frame = 0

Query: 6   YGCALV---LVSPAKISCFNGLLHPTFCPFPSRVT--FVNCNLTLSVGYRSNPIVAEYVC 65
           Y C LV    VSPAK +CFNGL +PTF P  S +   FVNC LT S+ YR+ P  A   C
Sbjct: 4   YSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSSLVNPFVNCTLTSSIIYRATPAPATATC 63

Query: 66  L--DPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSLGDLNFGCPCFGLKNMSE 125
           +  DPI EF  V        +S+KLAKDRET     + V+                    
Sbjct: 64  VYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCS---------------- 123

Query: 126 QLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD 168
              IF EY        G         M IALNE KLPGAP A+RTS+L AQN+L  D
Sbjct: 124 --KIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHD 162

BLAST of CmoCh04G003100 vs. NCBI nr
Match: KAG7030800.1 (hypothetical protein SDJN02_04837, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 512.7 bits (1319), Expect = 2.2e-141
Identity = 275/346 (79.48%), Postives = 283/346 (81.79%), Query Frame = 0

Query: 1   MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVC 60
           MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVC
Sbjct: 1   MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVC 60

Query: 61  LDPIAEFVVVVSEKLAKDR-ETIVEVENVVIRSLGDLNFGCP------------CFGLKN 120
           LDPIAEFVVVVS  L        ++ EN+   ++       P            C     
Sbjct: 61  LDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVLFPRQLPLIAQKFSECLTSAA 120

Query: 121 MSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD 180
           + + L IFGEYCMWSTEVLGHYWWSLSPKMVIAL+EGKLPGAPFASRTSILSAQNHLADD
Sbjct: 121 IIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADD 180

Query: 181 EGKAVCFITKILQYSVNSIDIFVAIHMTYFSQYMNHSGAVLAASEMLCNDGLQAFGLAAV 240
           EGK VCFITKILQYSVNSIDIFVAIHMTYFSQYMNHSGAVLAASEMLCNDGLQAFGLAAV
Sbjct: 181 EGKTVCFITKILQYSVNSIDIFVAIHMTYFSQYMNHSGAVLAASEMLCNDGLQAFGLAAV 240

Query: 241 AFAA---------------------VICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQ 300
           AFAA                     VICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQ
Sbjct: 241 AFAAGVLMRCLSCLTTCNVYFTEIIVICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQ 300

Query: 301 LLLGFCILFSSQHLYNLCKFQQNVKRAELKQKEMKELQKDQRGTIP 313
           LLLGFCILFSSQHLYNLCKFQQNVKRAELKQKEMKELQKDQRGTIP
Sbjct: 301 LLLGFCILFSSQHLYNLCKFQQNVKRAELKQKEMKELQKDQRGTIP 346

BLAST of CmoCh04G003100 vs. NCBI nr
Match: XP_023553226.1 (uncharacterized protein LOC111810699 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201.8 bits (512), Expect = 8.5e-48
Identity = 120/216 (55.56%), Postives = 124/216 (57.41%), Query Frame = 0

Query: 1   MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVC 60
           MGRVLYG A+VLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVC
Sbjct: 1   MGRVLYGWAMVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVC 60

Query: 61  LDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSLGDLNFGCPCFGLKNMSEQL 120
           LDP+AEFVV+        VSEKLAKDRETIVE                            
Sbjct: 61  LDPVAEFVVIETQRFKEQVSEKLAKDRETIVE---------------------------- 120

Query: 121 PIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADDEGKAV 180
                                                               ADDEGK V
Sbjct: 121 ----------------------------------------------------ADDEGKTV 136

Query: 181 CFITKILQYSVNSIDIFVAIHMTYFSQYMNHSGAVL 209
           CFITKILQYSVN IDIFVAI MTYFSQYMNHSGAV+
Sbjct: 181 CFITKILQYSVNFIDIFVAIQMTYFSQYMNHSGAVV 136

BLAST of CmoCh04G003100 vs. NCBI nr
Match: KAG6600134.1 (hypothetical protein SDJN03_05367, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.9 bits (481), Expect = 3.3e-44
Identity = 112/208 (53.85%), Postives = 113/208 (54.33%), Query Frame = 0

Query: 1   MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVC 60
           MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVC
Sbjct: 1   MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVC 60

Query: 61  LDPIAEFVVVVSEKLAKDRETIVEVENVVIRSLGDLNFGCPCFGLKNMSEQLPIFGEYCM 120
           LDPIAEFVVV                                                  
Sbjct: 61  LDPIAEFVVV-------------------------------------------------- 114

Query: 121 WSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADDEGKAVCFITKILQ 180
                                                       ADDEGK VCFITKILQ
Sbjct: 121 --------------------------------------------ADDEGKTVCFITKILQ 114

Query: 181 YSVNSIDIFVAIHMTYFSQYMNHSGAVL 209
           YSVNSIDIFVAIHMTYFSQYMNHSGAV+
Sbjct: 181 YSVNSIDIFVAIHMTYFSQYMNHSGAVV 114

BLAST of CmoCh04G003100 vs. NCBI nr
Match: XP_022151033.1 (protein PLASTID REDOX INSENSITIVE 2-like [Momordica charantia])

HSP 1 Score: 114.0 bits (284), Expect = 2.3e-21
Identity = 81/177 (45.76%), Postives = 95/177 (53.67%), Query Frame = 0

Query: 5   LYGCALVLVS---PAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVC 64
           L+GCAL+L S   PAKI+CFNGLLHPTF PFPS V  FVNC  T S  YR+ P+  ++V 
Sbjct: 63  LHGCALLLASAVPPAKITCFNGLLHPTFSPFPSLVKPFVNCTSTSSFSYRATPLPPKFVY 122

Query: 65  LDPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSLGDLNFGCPCFGLKNMSEQL 124
            DPI EF           +S+KLA+DR T             DL+F              
Sbjct: 123 PDPIPEFAEAETRKFREYLSKKLAEDRATFG----------NDLDFVVEVCS-------- 182

Query: 125 PIFGEYCMWSTEVLGHYWWSLSP--KMVIALNEGKLPGAPFASRTSILSAQNHLADD 168
            IFGEY     E  G     + P   M IALNE KLPGA  A+RTS+L AQNHL  D
Sbjct: 183 KIFGEYL--HVEYGGPETLLVEPFTNMFIALNERKLPGASLAARTSLLWAQNHLDQD 219

BLAST of CmoCh04G003100 vs. NCBI nr
Match: XP_008446243.1 (PREDICTED: uncharacterized protein LOC103489034 isoform X1 [Cucumis melo] >KAA0034339.1 uncharacterized protein E6C27_scaffold65G003420 [Cucumis melo var. makuwa] >TYK15580.1 uncharacterized protein E5676_scaffold35G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-20
Identity = 81/174 (46.55%), Postives = 95/174 (54.60%), Query Frame = 0

Query: 6   YGCALVL---VSPAKISCFNGLLHPTFCPFPSRV-TFVNCNLTLSVGYRSNPIVAEYVCL 65
           YGCALV    VSPAKI+ FNGL +PTF  FPS V   VNC LT SV YR+ PI A YV  
Sbjct: 4   YGCALVSAIEVSPAKITSFNGLHYPTFSLFPSFVKPLVNCTLTSSVIYRATPITASYVYP 63

Query: 66  DPIAEFVVV--------VSEKLAKDRETIVEVENVVIRSLGDLNFGCPCFGLKNMSEQLP 125
           +PI EF  V        +S+KLAKDRET                FG     + ++  +  
Sbjct: 64  EPIPEFAEVETQKFKEQLSKKLAKDRET----------------FGNDFDSVVDVCSK-- 123

Query: 126 IFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADD 168
           IFGEY        G         M IALNE KLPGAP A+RTS+L AQN+L +D
Sbjct: 124 IFGEYLHVEYGGPGTLIVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDND 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DB251.1e-2145.76protein PLASTID REDOX INSENSITIVE 2-like OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A5A7SZ045.6e-2146.55Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BEK85.6e-2146.55uncharacterized protein LOC103489034 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1JDH32.2e-1742.53protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita ... [more]
A0A6J1GYK93.8e-1741.81protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita ... [more]
Match NameE-valueIdentityDescription
KAG7030800.12.2e-14179.48hypothetical protein SDJN02_04837, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023553226.18.5e-4855.56uncharacterized protein LOC111810699 [Cucurbita pepo subsp. pepo][more]
KAG6600134.13.3e-4453.85hypothetical protein SDJN03_05367, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022151033.12.3e-2145.76protein PLASTID REDOX INSENSITIVE 2-like [Momordica charantia][more]
XP_008446243.11.2e-2046.55PREDICTED: uncharacterized protein LOC103489034 isoform X1 [Cucumis melo] >KAA00... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G003100.1CmoCh04G003100.1mRNA