CmoCh04G003100 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGCGGGTGCTCTACGGTTGTGCTCTTGTCTTGGTTTCTCCCGCCAAGATCTCATGTTTTAACGGTCTTCTTCATCCAACATTTTGTCCTTTCCCTTCTCGTGTAACCTTCGTCAATTGTAACTTAACTTTGTCCGTCGGTTACAGAAGCAATCCGATCGTGGCCGAGTATGTATGCCTAGATCCGATAGCGGAATTTGTAGTAGTCGTAAGTTTTTCTTTCCAATATAGCGCTTTATCTGCTCAAATTGATTCCGGTTTTGCGTTGATTTATATGTTTGGTTGTTTTTGGGAGGAAACCCAGAGATTTAAGGAGTAGGTGTCGGAGAAGCTAGCGAAGGATCGTGAGACGATTGTGGAGGTTTGCTCGAAGTTTATTGTTTTTTATTGATTTTCGAAACTTTTAGGTTGAAAATGTTGTGATTCGTTCGTTGGGTGATTTGAATTTTGGATGCCCTTGTTTTGGGTTGAAGAATATGTCTGAGCAGCTACCTGTTTGAGAAAATTTGTGAATGAGGCGACTGTTTGATTGCAGAGTTATTTGAGTTTTTTTGTGCTTTTGAGTTATCATGGCTTGAGAATTATTTCCCATAGGTTCAATAATTAAGCCCTGAGAAAACATCGGACCTGCCAATATAGCTACAGAACTAGTACTGTTTCCAAGACAGCTTCCATTAATTGCGCAGAAATTTTCTGAATGTTTGACCAGTGCTGCCATTATTGATATGCTTCTTGTATTTTGATTTTTCAAATCAAAACTGAAATGAAGATTCCAATTTGAATTCAGTTGTCCGAATTTATGTGATAGTCTTAACATGAAAGTATGTACTTCCAAGTTGTAATATCAGATATTTGGTGAATATTGCATGTGGAGTACGGAGGTTCTGGGACATTATTGGTGGAGCCTTTCACCCAAAATGGTTATTGCTCTCAATGAGGGGAAACTACCAGGAGCGCCATTTGCCTCAAGAACTTCGATCCTTTCAGCTCAAAATCATCTAGTTCATGATTGGAATTCGAAAAGAGGGCTTAAATGATCTGTTTTTTCTAGTTACATTTGTGAAGATCCTTGTATTTTGTATTGAGATTTTCTGTTCTTTTTGTTGTTGCAGGCAGATGATGAAGGAAAAGCTGTATGCTTCATCACAAAGATTCTCCAATACAGTGTCAATTCCATTGATATCTTTGTTGCTATACACATGACTTATTTCTCTCAATACATGAATCATTCTGGGGCTGTGGTTTTACACTGAATTGGAAATTTGGATGCTCATTTTCATGCTCTATATGAATCTTCTAACTTCCACAATGAGCATCTTAAATCAAGCTCCACTATTCTGTCGTATCAACCACACTTGCTTGTCATGATCAAGAACAAAGGGTTGAACATAAAATCAGCTGGCAGCTTCAGAAATGCTCTGCAATGATGGTCTCCAAGCCTTTGGCCTCGCTGCAGTGGCGTTTGCTGCTGGTGTTCTGATGCGATGTCTTTCATGTTTGACTACCTGCAATGTTTATTTCACAGAGATTATTGGTATGATTTTATCTTCAAAAAATCACTTCAAGTTGCCAAGGATCCCAATCACCATCATATTTGACTTTTTTCATTTTCTTTTGCAGTCATCTGCTGTGATTCAAAAGGAAACAAATCTGGTTACCTGCTGGCTATTTTCAGTCTCATCTCCGGCAGCCGGCTTCTCCGGCTTCCTCTCCGACTCCGGCAATTGCTTCTTGGATTTTGCATACTTTTTAGCTCGCAACACCTTTATAACCTCTGCAAATTCCAACAAAACGTCAAAAGGGCTGAACTAAAACAGAAGGAAATGAAAGAACTTCAAAAAGATCAAAGAGGCACCATACCCTGAGTAGTGACAAGCCGATAGGCATGGCCAAGAGCAAGAGTGTCATTTGGCCGGAGAAGCTTGACACGGGTAAACCGCACCGTTTTAGGCTCCCGATTATCTTCCTCAGATTGAGGCAAGGGAATTATAAGAGAAACATAGTGACCCGGATTAGTCCTCATGACTTCACTCGCCACCACCGGCCAATACAGCCTCTCAATCCGGCCAGTTGGATGCTGTATAACCAGAGCCGCCGCATCAACCGCCTGGCAATTCCCCATCTGAATGAATTCTGCAACTGATAGATAGATCGAAAGAAGAAGAAGAAGAAGAAGATGAAGATGAAGGAAATAAGTCTCTTTCTATACAGCTTCTGTGCTCGCCAAATGGGTCTACTTAGAAGTGCATGCCGTCCATTCATATATCTCACACTTTCCAACTAACTCAATGCAACGTGGGTCAAATTTATATCGAAAATTGACAATGTAACCCACGGAGATTAGAGCATTAAAAAAAAAATTACCTTTTTATACGTTCGATGATAAAAACTTAAAACTTTGTGATTTTGGCTTTTATTATTTTTCAATTAAAAC ATGGGGCGGGTGCTCTACGGTTGTGCTCTTGTCTTGGTTTCTCCCGCCAAGATCTCATGTTTTAACGGTCTTCTTCATCCAACATTTTGTCCTTTCCCTTCTCGTGTAACCTTCGTCAATTGTAACTTAACTTTGTCCGTCGGTTACAGAAGCAATCCGATCGTGGCCGAGTATGTATGCCTAGATCCGATAGCGGAATTTGTAGTAGTCGTGTCGGAGAAGCTAGCGAAGGATCGTGAGACGATTGTGGAGGTTGAAAATGTTGTGATTCGTTCGTTGGGTGATTTGAATTTTGGATGCCCTTGTTTTGGGTTGAAGAATATGTCTGAGCAGCTACCTATATTTGGTGAATATTGCATGTGGAGTACGGAGGTTCTGGGACATTATTGGTGGAGCCTTTCACCCAAAATGGTTATTGCTCTCAATGAGGGGAAACTACCAGGAGCGCCATTTGCCTCAAGAACTTCGATCCTTTCAGCTCAAAATCATCTAGCAGATGATGAAGGAAAAGCTGTATGCTTCATCACAAAGATTCTCCAATACAGTGTCAATTCCATTGATATCTTTGTTGCTATACACATGACTTATTTCTCTCAATACATGAATCATTCTGGGGCTGTGCTGGCAGCTTCAGAAATGCTCTGCAATGATGGTCTCCAAGCCTTTGGCCTCGCTGCAGTGGCGTTTGCTGCTGTCATCTGCTGTGATTCAAAAGGAAACAAATCTGGTTACCTGCTGGCTATTTTCAGTCTCATCTCCGGCAGCCGGCTTCTCCGGCTTCCTCTCCGACTCCGGCAATTGCTTCTTGGATTTTGCATACTTTTTAGCTCGCAACACCTTTATAACCTCTGCAAATTCCAACAAAACGTCAAAAGGGCTGAACTAAAACAGAAGGAAATGAAAGAACTTCAAAAAGATCAAAGAGGCACCATACCCTGAGTAGTGACAAGCCGATAGGCATGGCCAAGAGCAAGAGTGTCATTTGGCCGGAGAAGCTTGACACGGGTAAACCGCACCGTTTTAGGCTCCCGATTATCTTCCTCAGATTGAGGCAAGGGAATTATAAGAGAAACATAGTGACCCGGATTAGTCCTCATGACTTCACTCGCCACCACCGGCCAATACAGCCTCTCAATCCGGCCAGTTGGATGCTGTATAACCAGAGCCGCCGCATCAACCGCCTGGCAATTCCCCATCTGAATGAATTCTGCAACTGATAGATAGATCGAAAGAAGAAGAAGAAGAAGAAGATGAAGATGAAGGAAATAAGTCTCTTTCTATACAGCTTCTGTGCTCGCCAAATGGGTCTACTTAGAAGTGCATGCCGTCCATTCATATATCTCACACTTTCCAACTAACTCAATGCAACGTGGGTCAAATTTATATCGAAAATTGACAATGTAACCCACGGAGATTAGAGCATTAAAAAAAAAATTACCTTTTTATACGTTCGATGATAAAAACTTAAAACTTTGTGATTTTGGCTTTTATTATTTTTCAATTAAAAC ATGGGGCGGGTGCTCTACGGTTGTGCTCTTGTCTTGGTTTCTCCCGCCAAGATCTCATGTTTTAACGGTCTTCTTCATCCAACATTTTGTCCTTTCCCTTCTCGTGTAACCTTCGTCAATTGTAACTTAACTTTGTCCGTCGGTTACAGAAGCAATCCGATCGTGGCCGAGTATGTATGCCTAGATCCGATAGCGGAATTTGTAGTAGTCGTGTCGGAGAAGCTAGCGAAGGATCGTGAGACGATTGTGGAGGTTGAAAATGTTGTGATTCGTTCGTTGGGTGATTTGAATTTTGGATGCCCTTGTTTTGGGTTGAAGAATATGTCTGAGCAGCTACCTATATTTGGTGAATATTGCATGTGGAGTACGGAGGTTCTGGGACATTATTGGTGGAGCCTTTCACCCAAAATGGTTATTGCTCTCAATGAGGGGAAACTACCAGGAGCGCCATTTGCCTCAAGAACTTCGATCCTTTCAGCTCAAAATCATCTAGCAGATGATGAAGGAAAAGCTGTATGCTTCATCACAAAGATTCTCCAATACAGTGTCAATTCCATTGATATCTTTGTTGCTATACACATGACTTATTTCTCTCAATACATGAATCATTCTGGGGCTGTGCTGGCAGCTTCAGAAATGCTCTGCAATGATGGTCTCCAAGCCTTTGGCCTCGCTGCAGTGGCGTTTGCTGCTGTCATCTGCTGTGATTCAAAAGGAAACAAATCTGGTTACCTGCTGGCTATTTTCAGTCTCATCTCCGGCAGCCGGCTTCTCCGGCTTCCTCTCCGACTCCGGCAATTGCTTCTTGGATTTTGCATACTTTTTAGCTCGCAACACCTTTATAACCTCTGCAAATTCCAACAAAACGTCAAAAGGGCTGAACTAAAACAGAAGGAAATGAAAGAACTTCAAAAAGATCAAAGAGGCACCATACCCTGA MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSEKLAKDRETIVEVENVVIRSLGDLNFGCPCFGLKNMSEQLPIFGEYCMWSTEVLGHYWWSLSPKMVIALNEGKLPGAPFASRTSILSAQNHLADDEGKAVCFITKILQYSVNSIDIFVAIHMTYFSQYMNHSGAVLAASEMLCNDGLQAFGLAAVAFAAVICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQLLLGFCILFSSQHLYNLCKFQQNVKRAELKQKEMKELQKDQRGTIP Homology
BLAST of CmoCh04G003100 vs. ExPASy TrEMBL
Match: A0A6J1DB25 (protein PLASTID REDOX INSENSITIVE 2-like OS=Momordica charantia OX=3673 GN=LOC111019054 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.1e-21 Identity = 81/177 (45.76%), Postives = 95/177 (53.67%), Query Frame = 0
BLAST of CmoCh04G003100 vs. ExPASy TrEMBL
Match: A0A5A7SZ04 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00740 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 5.6e-21 Identity = 81/174 (46.55%), Postives = 95/174 (54.60%), Query Frame = 0
BLAST of CmoCh04G003100 vs. ExPASy TrEMBL
Match: A0A1S3BEK8 (uncharacterized protein LOC103489034 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489034 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 5.6e-21 Identity = 81/174 (46.55%), Postives = 95/174 (54.60%), Query Frame = 0
BLAST of CmoCh04G003100 vs. ExPASy TrEMBL
Match: A0A6J1JDH3 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485796 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.2e-17 Identity = 74/174 (42.53%), Postives = 85/174 (48.85%), Query Frame = 0
BLAST of CmoCh04G003100 vs. ExPASy TrEMBL
Match: A0A6J1GYK9 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458359 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.8e-17 Identity = 74/177 (41.81%), Postives = 87/177 (49.15%), Query Frame = 0
BLAST of CmoCh04G003100 vs. NCBI nr
Match: KAG7030800.1 (hypothetical protein SDJN02_04837, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 512.7 bits (1319), Expect = 2.2e-141 Identity = 275/346 (79.48%), Postives = 283/346 (81.79%), Query Frame = 0
BLAST of CmoCh04G003100 vs. NCBI nr
Match: XP_023553226.1 (uncharacterized protein LOC111810699 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 201.8 bits (512), Expect = 8.5e-48 Identity = 120/216 (55.56%), Postives = 124/216 (57.41%), Query Frame = 0
BLAST of CmoCh04G003100 vs. NCBI nr
Match: KAG6600134.1 (hypothetical protein SDJN03_05367, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 189.9 bits (481), Expect = 3.3e-44 Identity = 112/208 (53.85%), Postives = 113/208 (54.33%), Query Frame = 0
BLAST of CmoCh04G003100 vs. NCBI nr
Match: XP_022151033.1 (protein PLASTID REDOX INSENSITIVE 2-like [Momordica charantia]) HSP 1 Score: 114.0 bits (284), Expect = 2.3e-21 Identity = 81/177 (45.76%), Postives = 95/177 (53.67%), Query Frame = 0
BLAST of CmoCh04G003100 vs. NCBI nr
Match: XP_008446243.1 (PREDICTED: uncharacterized protein LOC103489034 isoform X1 [Cucumis melo] >KAA0034339.1 uncharacterized protein E6C27_scaffold65G003420 [Cucumis melo var. makuwa] >TYK15580.1 uncharacterized protein E5676_scaffold35G00740 [Cucumis melo var. makuwa]) HSP 1 Score: 111.7 bits (278), Expect = 1.2e-20 Identity = 81/174 (46.55%), Postives = 95/174 (54.60%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|