CmoCh04G002100 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G002100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Cmo_Chr04: 1045725 .. 1049852 (-)
RNA-Seq Expression	CmoCh04G002100
Synteny	CmoCh04G002100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCAATGGCACTTGCAGATCACCTTCAAAGAATCCACCCAGTTACCGACGTTGAACGTCCGCCACCACCACCGCCTCCTCCGCCATCAGCGCCGCCTCCCAAAGTTCTCCCTTCCAAGAAGACAAGATCTTCGTGTGTTTGCAAATGTTTTTGTTGGACATTTTGTGTTATTTTTCTTCTACTCGTCGTGATCGGAGGCGTCATCGGAATTCTCTATCTCGTTTTCAAGCCAAAAATTCCGACGTATTCCATCAACTCCTTAACTATCAGCGATCTCCGACTCAACCTCGACATGTCACTCTATGCAAGGTTTGGTTAATTCATTATGTAATCAATCATAAAGTTTGTTTAGAGTAAAATTAATGCTAAATTTCTTAGGGTTTTAATTTTTTTTTTAGTATTAATTAATATTAACTTTAATAGGTTCGACGTGAAGATCACAGCCTACAACCCGAATGAGAAGATCGGAATATACTATGAAAAGGGAGGAGTATTGAGCGTGTGGTATACGGACAAGAAGCTTTGTCAAGGGCCCTTGCCGGTGTTCTACCATGGCCACCGGAACAGGACGGCACTGGACGTGGATTTGATGGGAAGGACGGTGAAAGGAAACACTTTGATGGCGGCGTTAGCGGAGCAGCAGCGGACCGGCCGCATCCCATTGCAGCTCCGTGCGGCGGCGCCGGTGGCCGTGAAATTGGGACAGCTGAAGCTTAAGAAAGTAAAAATTTTGGGGAATTGCTTGTTGGTTGTGGATAGTTTGACTGCCAATAATGCCATTAGTATTAAAGCAAGTAATTGCAAGTTTAGGTTGAAACTTTAATTATTATTTTTTTATTTTTTGAAAATTCTCTACCAATTTTCAAAACTTTTGTTAATTTATTTTAATTTTCTATCCTCATATAATTTAAGTTATTTGAATTTTTAATATAATAAGAAAGTTATTTGAATTCTTAATATAATTTAATTTATACTCATATAAAAATATTGGGTATAAAGGAAATAAATAAATGAAGAGAAAATTTCGATGTGGGAGGAAATTAAATACTATTGTTTGAATTTTTATTTATTTATTTAAAAAAAGAAATTTCTTTGAAATTATAGCAATTTTGCAGAAACTGCGAACATATTTAATTAGCATAAATTAAAAATAAATTTGCTTAATTTGATTGGAACTATTTATATCATCAAATACATATAATTATGTCATCAATTACATATAATACAATTTTTATTGAATTCTTATTCACTTAGACATCACATAAATTATTTGAATTATAGAAGATATAAGGTGGACATGTGATATTCTATGATACAATTTTTTCTTTCTGATTTTCATTCAAGATTTTAAAACGTGTTTGTTAGGAGAATGTTTCTATACTTTTATAACGAATGCTTCATTTTTCTCTCCAACTTGAGCCCTTTAAGGGAGTTGATTGTGAGATCTCATGATCCACTCTCTTTGAGGGCTCAACGTCCTCACTTATACACCATTCGATGTCTGATTCTGATATTATTTGTAACTGTTCAAATCTACTACTACTGAACATTGTCTTCTTTGAATAATTCCACGTTAATTGAAGTCAGAACTGGAACTAAAAATGATACAGGAATAATTAATTATTTTAAAGCCCATGGCCCTTTCCATTCTTAACTCATATTAGCTTTGCTTTTAGCTGTATTCACGACCAATCACATGCACTTTCACCCCAACCCATCATCATCATCTTCCACCTTTTTTTTTTTAAATTTTATTTTATTATTATTTATTTATATAATTCTCCCTCTCTCTCTCTCTTCCCTTTTCTCATTCTCTCTCCTCTCAAACAATTTTAATTTTAGATCATCTTACATTTAAATCTATTAATTACTCCACATATTCTAAATTTTATAAAATTTACAAACATTTTAAATACAAATGTTAAAGTTCAATTACTAAAGGGATCATTTTTGGTTCGTTTATATTTAAATGGGGAGAATTTTAAAATATGTATCTATGATTAAGTTAAGCTCATTTTAATTTATTTACGGAAATCATTTATATTCAAGTCCATATTTAAATATTATTTAAGTTTGAATCAACAAATTAAAAATTTTAGTTTGATGTCAATTTTTTACTAAATAAAAATTAGTTTTAGTCATAAATTCTTGTGTTGTATTTAATTGATATCTGACGACATTTATTATAAAAGCTTAATATATGTGATTTAGAATGGAAGTTTATGTCATTTTATTTGATAAAATAAATACGAGGTGAGAATTTGAATTTCATTATGTGCCGTTATTGTTTTTAGCAAAAAAAAATCTATATATTATAACATATAATTTTAGGAATTTAGTGTTTGAATTTTTATCATTAAATGTTTTATTATAAACTTTGTATTTTCAAAATTTAAAATATATTTAAAAAAAGAACATAAATGAATGAATTATAAATATGAAAAAGCTGTATTTAAGTTTTCACGAATAAATAAAATTTCAAAACTTTGATGTGGAAAAGAAGATAAGATAAGATTGAAATATAATATTCGGAAAATTGTAAGGAAACCCGGCCCAGAAACCGGGCCCATGGAAAGTAAAATGGGCCCCCGAAAGGACACGTGGAGGTTAAGGAAGAGCCTATCCAGTAAAATAACAATTGGCTTATAGTAAAGCGCGCTTTATCTATCCACCTGTCTGGACGAGACGTGTCCCACACGGATAATGCAAAATTCCTTTTTATTTATTTATTGTATTTATATATTTATTTATTAAAAAAAAATTTAATGGGATATCCGCAAACCACTTTGGTTCACACGTTTCTCCATATACTCTTACGCCTCTCTTCGCCACATAATTTTCAATTTTTCTTTAATTTTTCCTTTTTTATCTTTATTTTATTTTTATATATATAAATAAATCTCTTCCCTAAAATAAAATAAAATAATAAACATAAATATTAATTAAAAATTAGGTCCACCAAATTCCCCACTTAGCCCTTGAGGGTGACTGGACAATGCACAACCTCTGATCAATCTCTTGCATAATTTTTTTTAAAATTTTTTTTATAATGAATTATTTAATTTTGTATTTTTATTCTAAAAATATGTAATGGTAAAGTATTACGTTCAGAAGCGGTGTGTGTGTGGATATTTAGAGAGGGAAAGAGGGAAGAAAAAGGGGTTTTGGTGGGTTTAACCCGATATAGCCGGTAACCACGGTGGTGTGTACCGGATGTGTCGGTTTGATGGTCAAACATTTTGGGATATATGTCTGTGTGTAAGAGGTTTTAGGCACTGTTTATGTATTCCTCCGTTTGAGAGAGAGAAACAGAGATTTTCATCTTCAAACTCTTTCTTTGGGATTTGGGTTCTGAAATTTCATGGATCTCTTTCATTTTCCCCTTCTCCATTCCGGATCTCCACCTTGAATTTCGTGTAATTCTGCAACATTCTTCTTCTTCTTCCATTTGGGTTTCTGTTTTTTCTGGAATTCTTTTGAAATCTCAGCTCCAATTTGGATCTTGGTTTTGCATGATTTATGCCGATCCTTCCTCTACTGGTGAGCTTTTTGTTTTTGCGCGCACAATTTCTGAGTTTGGATTTTGTTTCATCGGTTCGTGTTCTTCGGGATGTTCGGTTCTCGCTTTTCCTTTTGTTTCGATGGGTTTTGCGTTGTTGGTTTCATTTGTGTTGGAATTATGAACAATTGGGTCTTCAGAAATTGTATGAAGTTCGAAAGTTTTACTGGGTTTAAGATCCGATCCTGTGGATTTAACTTTGGTTTAGATGTTTTTGGGATTGGGTTTTGATTTTGAATCAGCTTGTTTTGGCCGGATTTGTGTTTTCCTTTTCCTTTATCTCTTTGCTTCTAAGCTAATCAAGTTGTTGAGATTGGAACTTCTTTCATCGCTTTGCTCCAGATTTCCAGTTCAAGTTTCTTCGTTGTCACATTCAAATTTTGAATATTCTTGGAGACTAAATCTGGGTTATCAATTTTACCCTCAAACTTCGTTGCATTAACATTGTTGTAGTAAAGAATCGTGTTTGTCTGCATTCCAATTCGAATCAAATTTCTAAATTGAATGATTTTGATCTGTTGTTGTTTGGATGATTTGACAGTGAAAGTGGTGAATCTCTGTGTTTGA

mRNA sequence

CTTCCAATGGCACTTGCAGATCACCTTCAAAGAATCCACCCAGTTACCGACGTTGAACGTCCGCCACCACCACCGCCTCCTCCGCCATCAGCGCCGCCTCCCAAAGTTCTCCCTTCCAAGAAGACAAGATCTTCGTGTGTTTGCAAATGTTTTTGTTGGACATTTTGTGTTATTTTTCTTCTACTCGTCGTGATCGGAGGCGTCATCGGAATTCTCTATCTCGTTTTCAAGCCAAAAATTCCGACGTATTCCATCAACTCCTTAACTATCAGCGATCTCCGACTCAACCTCGACATGTCACTCTATGCAAGGTTCGACGTGAAGATCACAGCCTACAACCCGAATGAGAAGATCGGAATATACTATGAAAAGGGAGGAGTATTGAGCGTGTGGTATACGGACAAGAAGCTTTGTCAAGGGCCCTTGCCGGTGTTCTACCATGGCCACCGGAACAGGACGGCACTGGACGTGGATTTGATGGGAAGGACGGTGAAAGGAAACACTTTGATGGCGGCGTTAGCGGAGCAGCAGCGGACCGGCCGCATCCCATTGCAGCTCCGTGCGGCGGCGCCGGTGGCCGTGAAATTGGGACAGCTGAAGCTTAAGAAAGTAAAAATTTTGGGGAATTGCTTGTTGGTTGTGGATAGTTTGACTGCCAATAATGCCATTAGTATTAAAGCAAAGAGAGAAACAGAGATTTTCATCTTCAAACTCTTTCTTTGGGATTTGGGTTCTGAAATTTCATGGATCTCTTTCATTTTCCCCTTCTCCATTCCGGATCTCCACCTTGAATTTCGTGTAATTCTGCAACATTCTTCTTCTTCTTCCATTTGGGTTTCTGTTTTTTCTGGAATTCTTTTGAAATCTCAGCTCCAATTTGGATCTTGGTTTTGCATGATTTATGCCGATCCTTCCTCTACTGTGAAAGTGGTGAATCTCTGTGTTTGA

Coding sequence (CDS)

ATGGCACTTGCAGATCACCTTCAAAGAATCCACCCAGTTACCGACGTTGAACGTCCGCCACCACCACCGCCTCCTCCGCCATCAGCGCCGCCTCCCAAAGTTCTCCCTTCCAAGAAGACAAGATCTTCGTGTGTTTGCAAATGTTTTTGTTGGACATTTTGTGTTATTTTTCTTCTACTCGTCGTGATCGGAGGCGTCATCGGAATTCTCTATCTCGTTTTCAAGCCAAAAATTCCGACGTATTCCATCAACTCCTTAACTATCAGCGATCTCCGACTCAACCTCGACATGTCACTCTATGCAAGGTTCGACGTGAAGATCACAGCCTACAACCCGAATGAGAAGATCGGAATATACTATGAAAAGGGAGGAGTATTGAGCGTGTGGTATACGGACAAGAAGCTTTGTCAAGGGCCCTTGCCGGTGTTCTACCATGGCCACCGGAACAGGACGGCACTGGACGTGGATTTGATGGGAAGGACGGTGAAAGGAAACACTTTGATGGCGGCGTTAGCGGAGCAGCAGCGGACCGGCCGCATCCCATTGCAGCTCCGTGCGGCGGCGCCGGTGGCCGTGAAATTGGGACAGCTGAAGCTTAAGAAAGTAAAAATTTTGGGGAATTGCTTGTTGGTTGTGGATAGTTTGACTGCCAATAATGCCATTAGTATTAAAGCAAAGAGAGAAACAGAGATTTTCATCTTCAAACTCTTTCTTTGGGATTTGGGTTCTGAAATTTCATGGATCTCTTTCATTTTCCCCTTCTCCATTCCGGATCTCCACCTTGAATTTCGTGTAATTCTGCAACATTCTTCTTCTTCTTCCATTTGGGTTTCTGTTTTTTCTGGAATTCTTTTGAAATCTCAGCTCCAATTTGGATCTTGGTTTTGCATGATTTATGCCGATCCTTCCTCTACTGTGAAAGTGGTGAATCTCTGTGTTTGA

Protein sequence

MALADHLQRIHPVTDVERPPPPPPPPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLLVVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKAKRETEIFIFKLFLWDLGSEISWISFIFPFSIPDLHLEFRVILQHSSSSSIWVSVFSGILLKSQLQFGSWFCMIYADPSSTVKVVNLCV

Homology

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BLAST of CmoCh04G002100 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.4e-47
Identity = 115/239 (48.12%), Postives = 145/239 (60.67%), Query Frame = 0


Query: 8   QRIHPVTDVE----RPPPPPPPPPSA-----PPPKV-----------LPSKKTRSSCVCK 67
           Q+I+PV D E    RP  P  P  S+      P KV           L   K R SC C+
Sbjct: 5   QKIYPVQDPEAATARPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCCCR 64

Query: 68  CFCWTFCVIFLLLVVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKI 127
           CFC+TFC + LL+V +G  IGILYLVFKPK+P YSI+ L ++   LN D SL   F+V I
Sbjct: 65  CFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAFNVTI 124

Query: 128 TAYNPNEKIGIYYEKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTL 187
           TA NPNEKIGIYYE G  ++VWY + +L  G LP FY GH N T + V++ G+T   + L
Sbjct: 125 TAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQNASGL 184

Query: 188 MAALAE-QQRTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 226
              L E QQRTG IPL++R   PV VK G+LKL +V+ L  C + VDSL  NN I I++
Sbjct: 185 RTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNVIKIQS 243

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BLAST of CmoCh04G002100 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.8e-23
Identity = 75/237 (31.65%), Postives = 125/237 (52.74%), Query Frame = 0


Query: 17  ERPPPPP---------------PPPPSAPPPKVLPSKKT-RSSCVCKCFCWTFCVIFLLL 76
           ++P PPP               PPP +A   + L  KKT RS+C C CFC     +F+L+
Sbjct: 28  KKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCRC-CFCSFLAAVFILI 87

Query: 77  VVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYY 136
           V+ G    +LYL+++P+ P YSI   ++S + LN    +   F+V + + N N KIG+YY
Sbjct: 88  VLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYY 147

Query: 137 EKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRT--- 196
           EK   + V+Y D  +  G +PVFY   +N T + + L G  ++   L + + ++ R    
Sbjct: 148 EKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQ---LTSGMRKEMRNEVS 207

Query: 197 -GRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTA-NNAISIKAKRETEIF 233
              +P +L+  APV +K G +K   + +  +C + VD LTA +  +S K   + +++
Sbjct: 208 KKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDVDLW 260

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BLAST of CmoCh04G002100 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-09
Identity = 40/146 (27.40%), Postives = 69/146 (47.26%), Query Frame = 0


Query: 27  PSAPPPKVLPSKKTR--------SSCVCKCFCWTFCVIFLLLVVIGGVIG----ILYLVF 86
           PS PPPK +     R          C+  C C    VIF +L+ I  ++G    I++L+F
Sbjct: 11  PSIPPPKKVSHSHGRRGGGCGCLGDCLGCCGCCILSVIFNILITIAVLLGIAALIIWLIF 70

Query: 87  KPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTDKK 146
           +P    + +    +++  L+   +L    D+  T  NPN +IG+YY++  V   +   + 
Sbjct: 71  RPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQRF 130

Query: 147 LCQGPLPVFYHGHRNRTALDVDLMGR 161
                +  FY GH+N T +   L+G+
Sbjct: 131 GMSNNISKFYQGHKNTTVVGTKLVGQ 156

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BLAST of CmoCh04G002100 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06
Identity = 39/153 (25.49%), Postives = 73/153 (47.71%), Query Frame = 0


Query: 57  FLLLVVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKI 116
           F+++V+I   I +++++ +P  P + +   T+    L+    L + F + I + N N +I
Sbjct: 28  FIIIVLI--TIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNSRI 87

Query: 117 GIYYEKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMA-ALAEQQ 176
           GIYY++  V + +   +   +  +P  Y GH+        + G +V      A AL ++Q
Sbjct: 88  GIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGDEQ 147

Query: 177 RTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNC 209
             G + L +RA   V  K+G L   K  +   C
Sbjct: 148 NRGFVTLIIRADGRVRWKVGTLITGKYHLHVRC 178

[Close]

BLAST of CmoCh04G002100 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06
Identity = 42/165 (25.45%), Postives = 77/165 (46.67%), Query Frame = 0


Query: 51  WTFCVIFLLLVVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAY 110
           +TF   F  L++I   I +++L+  P+ P +S+    I  L L    +      V++T +
Sbjct: 29  FTFSTFFSGLLLI---IFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLF 88

Query: 111 --NPNEKIGIYYEKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVK-GNTL 170
             NPN+K+GIYY+K  V + +   +   +  LP FY  H     L   L G  +    + 
Sbjct: 89  SKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSF 148

Query: 171 MAALAEQQRTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVV 213
              ++ ++ TG+I + ++    +  K+G       +   NCL +V
Sbjct: 149 GYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAIV 190

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BLAST of CmoCh04G002100 vs. ExPASy TrEMBL
Match: A0A6J1FWY3 (NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111447722 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 1.1e-120
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MALADHLQRIHPVTDVERPPPPPPPPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL 60
           MALADHLQRIHPVTDVERPPPPPPPPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL
Sbjct: 1   MALADHLQRIHPVTDVERPPPPPPPPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL 60

Query: 61  VVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYY 120
           VVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYY
Sbjct: 61  VVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYY 120

Query: 121 EKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTGRI 180
           EKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTGRI
Sbjct: 121 EKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTGRI 180

Query: 181 PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 226
           PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA
Sbjct: 181 PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 225

[Close]

BLAST of CmoCh04G002100 vs. ExPASy TrEMBL
Match: A0A6J1K4R4 (NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111491664 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 5.6e-114
Identity = 215/225 (95.56%), Postives = 218/225 (96.89%), Query Frame = 0


Query: 1   MALADHLQRIHPVTDVERPPPPPPPPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL 60
           MALADHLQRIHPVTDVER  PPPP PPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL
Sbjct: 1   MALADHLQRIHPVTDVER--PPPPHPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL 60

Query: 61  VVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYY 120
           +VIGGV+GILYLVFKPKIPTYSINSLTISDLRLN+DMSLYARFDVKITAYNPNEKIGIYY
Sbjct: 61  IVIGGVVGILYLVFKPKIPTYSINSLTISDLRLNVDMSLYARFDVKITAYNPNEKIGIYY 120

Query: 121 EKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTGRI 180
           EKGGVLSVWYTDKKLCQG LP FYHGHRNRTALDVDL GRTVKGNTLMAAL EQQRTGRI
Sbjct: 121 EKGGVLSVWYTDKKLCQGSLPAFYHGHRNRTALDVDLTGRTVKGNTLMAALVEQQRTGRI 180

Query: 181 PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 226
           PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA
Sbjct: 181 PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 223

[Close]

BLAST of CmoCh04G002100 vs. ExPASy TrEMBL
Match: A0A0A0KQ99 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182130 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 2.3e-91
Identity = 178/233 (76.39%), Postives = 202/233 (86.70%), Query Frame = 0


Query: 1   MALADHLQRIHPVTDVERPPPPPPPPPSAPPP--------KVLPSKKTRSSCVCKCFCWT 60
           MAL DH Q+IHP+TDVE  PPPPPP  SAPPP        ++LP KK R SC+C+C C+T
Sbjct: 1   MALVDHHQKIHPLTDVE--PPPPPPQSSAPPPPLEKALHHQILPPKK-RRSCLCRCLCYT 60

Query: 61  FCVIFLLLVVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNP 120
           FC+I LLL+++G VIGILYLVFKPKIPT+SI+SL ISDLRLN DMSLYARFDVKIT YNP
Sbjct: 61  FCLILLLLIILGAVIGILYLVFKPKIPTFSIDSLNISDLRLNFDMSLYARFDVKITTYNP 120

Query: 121 NEKIGIYYEKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALA 180
           NEKIGIYYEKGGVLSVWYT+ KLC+G LP FYHGHRN+TALDV L GRTV G+TLM+AL 
Sbjct: 121 NEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVVLTGRTVYGSTLMSALV 180

Query: 181 EQQRTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 226
           EQQ+TGRIPLQL+A APVAVK+G++KLKKVKILGNCLLVVDSLTANNAI+IKA
Sbjct: 181 EQQQTGRIPLQLQAVAPVAVKMGKMKLKKVKILGNCLLVVDSLTANNAITIKA 230

[Close]

BLAST of CmoCh04G002100 vs. ExPASy TrEMBL
Match: A0A5A7U340 (NDR1/HIN1-Like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00330 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 9.7e-90
Identity = 176/232 (75.86%), Postives = 201/232 (86.64%), Query Frame = 0


Query: 1   MALADHLQRIHPVTDVERPPPPPPPPPSAPPPK-------VLPSKKTRSSCVCKCFCWTF 60
           MAL DH Q+IHP+TDVE  PPPPPP  SAPPP+       +LP KK R S +C+C C++F
Sbjct: 1   MALVDHHQKIHPLTDVE--PPPPPPQSSAPPPEKAVHHQIILPPKK-RRSYLCRCLCYSF 60

Query: 61  CVIFLLLVVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPN 120
           C+I L+L+++G VIGILYLVFKPKIPT+SI+SL ISDLRLN DMSLYARFDVKIT YNPN
Sbjct: 61  CLILLILIILGAVIGILYLVFKPKIPTFSIDSLNISDLRLNFDMSLYARFDVKITTYNPN 120

Query: 121 EKIGIYYEKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAE 180
           EKIGIYYEKGGVLSVWYT+ KLC+G LP FYHGHRN+TALDV L GRTV G+TLM+AL E
Sbjct: 121 EKIGIYYEKGGVLSVWYTENKLCEGSLPEFYHGHRNKTALDVVLTGRTVYGSTLMSALVE 180

Query: 181 QQRTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 226
           QQ+TGRIPLQLRA APVAVK+G++KLKKVKILGNCLLVVDSLTANNAI+IKA
Sbjct: 181 QQQTGRIPLQLRAVAPVAVKMGKMKLKKVKILGNCLLVVDSLTANNAITIKA 229

[Close]

BLAST of CmoCh04G002100 vs. ExPASy TrEMBL
Match: A0A1S3CFA6 (NDR1/HIN1-Like protein 3 OS=Cucumis melo OX=3656 GN=LOC103500225 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 9.7e-90
Identity = 176/232 (75.86%), Postives = 201/232 (86.64%), Query Frame = 0


Query: 1   MALADHLQRIHPVTDVERPPPPPPPPPSAPPPK-------VLPSKKTRSSCVCKCFCWTF 60
           MAL DH Q+IHP+TDVE  PPPPPP  SAPPP+       +LP KK R S +C+C C++F
Sbjct: 1   MALVDHHQKIHPLTDVE--PPPPPPQSSAPPPEKAVHHQIILPPKK-RRSYLCRCLCYSF 60

Query: 61  CVIFLLLVVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPN 120
           C+I L+L+++G VIGILYLVFKPKIPT+SI+SL ISDLRLN DMSLYARFDVKIT YNPN
Sbjct: 61  CLILLILIILGAVIGILYLVFKPKIPTFSIDSLNISDLRLNFDMSLYARFDVKITTYNPN 120

Query: 121 EKIGIYYEKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAE 180
           EKIGIYYEKGGVLSVWYT+ KLC+G LP FYHGHRN+TALDV L GRTV G+TLM+AL E
Sbjct: 121 EKIGIYYEKGGVLSVWYTENKLCEGSLPEFYHGHRNKTALDVVLTGRTVYGSTLMSALVE 180

Query: 181 QQRTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 226
           QQ+TGRIPLQLRA APVAVK+G++KLKKVKILGNCLLVVDSLTANNAI+IKA
Sbjct: 181 QQQTGRIPLQLRAVAPVAVKMGKMKLKKVKILGNCLLVVDSLTANNAITIKA 229

[Close]

BLAST of CmoCh04G002100 vs. NCBI nr
Match: XP_022942795.1 (NDR1/HIN1-like protein 6 [Cucurbita moschata])

HSP 1 Score: 443.0 bits (1138), Expect = 2.2e-120
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MALADHLQRIHPVTDVERPPPPPPPPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL 60
           MALADHLQRIHPVTDVERPPPPPPPPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL
Sbjct: 1   MALADHLQRIHPVTDVERPPPPPPPPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL 60

Query: 61  VVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYY 120
           VVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYY
Sbjct: 61  VVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYY 120

Query: 121 EKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTGRI 180
           EKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTGRI
Sbjct: 121 EKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTGRI 180

Query: 181 PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 226
           PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA
Sbjct: 181 PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 225

[Close]

BLAST of CmoCh04G002100 vs. NCBI nr
Match: XP_023515288.1 (NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.9 bits (1091), Expect = 6.2e-115
Identity = 216/227 (95.15%), Postives = 221/227 (97.36%), Query Frame = 0


Query: 1   MALADHLQRIHPVTDVER--PPPPPPPPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFL 60
           MALADHLQRIHPVTDVER  PPPPPPPPPSAPPPK+LPSKKTRSSCVCKCFCWTFCVIFL
Sbjct: 1   MALADHLQRIHPVTDVERPPPPPPPPPPPSAPPPKLLPSKKTRSSCVCKCFCWTFCVIFL 60

Query: 61  LLVVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGI 120
           LL+VIGGV+GILYLVFKPKIPTYSINSLTISDLRLN+DMSLYARFDVKITAYNPNEKIGI
Sbjct: 61  LLIVIGGVVGILYLVFKPKIPTYSINSLTISDLRLNVDMSLYARFDVKITAYNPNEKIGI 120

Query: 121 YYEKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTG 180
           YYEKGGVLSVWYTDKKLCQG LP FYHGHRNRTALDVDL GRTVKGNTLMAAL EQQRTG
Sbjct: 121 YYEKGGVLSVWYTDKKLCQGSLPAFYHGHRNRTALDVDLTGRTVKGNTLMAALVEQQRTG 180

Query: 181 RIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 226
           RIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSL+ANNAISIKA
Sbjct: 181 RIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLSANNAISIKA 227

[Close]

BLAST of CmoCh04G002100 vs. NCBI nr
Match: KAG7030716.1 (NDR1/HIN1-like protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 420.6 bits (1080), Expect = 1.2e-113
Identity = 215/225 (95.56%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 1   MALADHLQRIHPVTDVERPPPPPPPPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL 60
           MALADHLQRIHP+TDVER  PPPP PPSAPPPKVLPS+KT SSCVCKCFCWTFCVIFLLL
Sbjct: 1   MALADHLQRIHPLTDVER--PPPPLPPSAPPPKVLPSEKTSSSCVCKCFCWTFCVIFLLL 60

Query: 61  VVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYY 120
           +VIGGV+GILYLVFKPKIPTYSINSLTISDLRLN+DMSLYARFDVKITAYNPNEKIGIYY
Sbjct: 61  IVIGGVVGILYLVFKPKIPTYSINSLTISDLRLNVDMSLYARFDVKITAYNPNEKIGIYY 120

Query: 121 EKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTGRI 180
           EKGGVLSVWYTDKKLCQG LPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTGRI
Sbjct: 121 EKGGVLSVWYTDKKLCQGSLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTGRI 180

Query: 181 PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 226
           PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA
Sbjct: 181 PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 223

[Close]

BLAST of CmoCh04G002100 vs. NCBI nr
Match: XP_022996441.1 (NDR1/HIN1-like protein 6 [Cucurbita maxima])

HSP 1 Score: 420.6 bits (1080), Expect = 1.2e-113
Identity = 215/225 (95.56%), Postives = 218/225 (96.89%), Query Frame = 0


Query: 1   MALADHLQRIHPVTDVERPPPPPPPPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL 60
           MALADHLQRIHPVTDVER  PPPP PPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL
Sbjct: 1   MALADHLQRIHPVTDVER--PPPPHPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL 60

Query: 61  VVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYY 120
           +VIGGV+GILYLVFKPKIPTYSINSLTISDLRLN+DMSLYARFDVKITAYNPNEKIGIYY
Sbjct: 61  IVIGGVVGILYLVFKPKIPTYSINSLTISDLRLNVDMSLYARFDVKITAYNPNEKIGIYY 120

Query: 121 EKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTGRI 180
           EKGGVLSVWYTDKKLCQG LP FYHGHRNRTALDVDL GRTVKGNTLMAAL EQQRTGRI
Sbjct: 121 EKGGVLSVWYTDKKLCQGSLPAFYHGHRNRTALDVDLTGRTVKGNTLMAALVEQQRTGRI 180

Query: 181 PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 226
           PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA
Sbjct: 181 PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 223

[Close]

BLAST of CmoCh04G002100 vs. NCBI nr
Match: KAG6600045.1 (NDR1/HIN1-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 417.2 bits (1071), Expect = 1.3e-112
Identity = 213/225 (94.67%), Postives = 219/225 (97.33%), Query Frame = 0


Query: 1   MALADHLQRIHPVTDVERPPPPPPPPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIFLLL 60
           MALADHLQRIHP+TDVER  PPPP PPSAPPPKVLPS+KT SSCVCKCFCWTFCVIFLLL
Sbjct: 1   MALADHLQRIHPLTDVER--PPPPLPPSAPPPKVLPSEKTSSSCVCKCFCWTFCVIFLLL 60

Query: 61  VVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYY 120
           +VIGGV+GILYLVFKPKIPTYSINSLTISDLRLN+DMSLYARFDVKITAYNPNEKIGIYY
Sbjct: 61  IVIGGVVGILYLVFKPKIPTYSINSLTISDLRLNVDMSLYARFDVKITAYNPNEKIGIYY 120

Query: 121 EKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRTGRI 180
           EKGGVLSVWYTDK+LCQG LPVFYHGHRNRTALDVDL GRTVKGNTLMAALAEQQRTGRI
Sbjct: 121 EKGGVLSVWYTDKRLCQGSLPVFYHGHRNRTALDVDLTGRTVKGNTLMAALAEQQRTGRI 180

Query: 181 PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 226
           PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA
Sbjct: 181 PLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 223

[Close]

BLAST of CmoCh04G002100 vs. TAIR 10
Match: AT1G54540.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 226.1 bits (575), Expect = 3.9e-59
Identity = 121/228 (53.07%), Postives = 160/228 (70.18%), Query Frame = 0


Query: 8   QRIHPVTDVE----RPPPPPP------PPPSAPPPKVLPSKKTRSSCVCKCFCWTFCVIF 67
           Q+IHPV  +E    +   P P      P     PP V+PS K R+ C CK FCW   ++ 
Sbjct: 5   QKIHPVLQMEANKTKTTTPAPGKTVLLPVQRPIPPPVIPS-KNRNMC-CKIFCWVLSLLV 64

Query: 68  LLLVVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIG 127
           + L+ +   + ++Y VF PK+P+Y +NSL +++L +NLD+SL A F V+ITA NPNEKIG
Sbjct: 65  IALIALAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLSLSAEFKVEITARNPNEKIG 124

Query: 128 IYYEKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRT 187
           IYYEKGG + VWY   KLC+GP+P FY GHRN T L+V L GR   GNT++AAL +QQ+T
Sbjct: 125 IYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALTGRAQYGNTVLAALQQQQQT 184

Query: 188 GRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 226
           GR+PL L+  APVA+KLG LK+KK++ILG+C LVVDSL+ NN I+IKA
Sbjct: 185 GRVPLDLKVNAPVAIKLGNLKMKKIRILGSCKLVVDSLSTNNNINIKA 230

[Close]

BLAST of CmoCh04G002100 vs. TAIR 10
Match: AT5G36970.1 (NDR1/HIN1-like 25 )

HSP 1 Score: 194.5 bits (493), Expect = 1.3e-49
Identity = 113/243 (46.50%), Postives = 152/243 (62.55%), Query Frame = 0


Query: 3   LADHLQRIHPVTDVERPPPPPPP-----------------PPSAP--PPKVLPSKKTRSS 62
           ++DH Q+IHPV+D E PP P  P                   +AP  PP+    KK   S
Sbjct: 1   MSDH-QKIHPVSDPEAPPHPTAPLVPRGSSRSEHGDPTKTQQAAPLDPPR---EKKGSRS 60

Query: 63  CVCKCFCWTFCVIFLLLVVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARF 122
           C C+C C+T  V+FLL+V++G ++GILYLVF+PK P Y+I+ L ++  +LN D+SL   F
Sbjct: 61  CWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLSTAF 120

Query: 123 DVKITAYNPNEKIGIYYEKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVK 182
           +V ITA NPNEKIGIYYE G  +SV Y   ++  G LP FY GH N T + V++ G T  
Sbjct: 121 NVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGFTQN 180

Query: 183 GNTLMAALAEQQR-TGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAIS 226
             +LM  L EQQR TG IPL++R   PV +KLG+LKL KV+ L  C + VDSL AN+ I 
Sbjct: 181 ATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSVDSLAANSVIR 239

[Close]

BLAST of CmoCh04G002100 vs. TAIR 10
Match: AT1G65690.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 189.9 bits (481), Expect = 3.1e-48
Identity = 115/239 (48.12%), Postives = 145/239 (60.67%), Query Frame = 0


Query: 8   QRIHPVTDVE----RPPPPPPPPPSA-----PPPKV-----------LPSKKTRSSCVCK 67
           Q+I+PV D E    RP  P  P  S+      P KV           L   K R SC C+
Sbjct: 5   QKIYPVQDPEAATARPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCCCR 64

Query: 68  CFCWTFCVIFLLLVVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKI 127
           CFC+TFC + LL+V +G  IGILYLVFKPK+P YSI+ L ++   LN D SL   F+V I
Sbjct: 65  CFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAFNVTI 124

Query: 128 TAYNPNEKIGIYYEKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTL 187
           TA NPNEKIGIYYE G  ++VWY + +L  G LP FY GH N T + V++ G+T   + L
Sbjct: 125 TAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQNASGL 184

Query: 188 MAALAE-QQRTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTANNAISIKA 226
              L E QQRTG IPL++R   PV VK G+LKL +V+ L  C + VDSL  NN I I++
Sbjct: 185 RTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNVIKIQS 243

[Close]

BLAST of CmoCh04G002100 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 109.8 bits (273), Expect = 4.1e-24
Identity = 75/237 (31.65%), Postives = 125/237 (52.74%), Query Frame = 0


Query: 17  ERPPPPP---------------PPPPSAPPPKVLPSKKT-RSSCVCKCFCWTFCVIFLLL 76
           ++P PPP               PPP +A   + L  KKT RS+C C CFC     +F+L+
Sbjct: 28  KKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCRC-CFCSFLAAVFILI 87

Query: 77  VVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYY 136
           V+ G    +LYL+++P+ P YSI   ++S + LN    +   F+V + + N N KIG+YY
Sbjct: 88  VLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYY 147

Query: 137 EKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRT--- 196
           EK   + V+Y D  +  G +PVFY   +N T + + L G  ++   L + + ++ R    
Sbjct: 148 EKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQ---LTSGMRKEMRNEVS 207

Query: 197 -GRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTA-NNAISIKAKRETEIF 233
              +P +L+  APV +K G +K   + +  +C + VD LTA +  +S K   + +++
Sbjct: 208 KKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDVDLW 260

[Close]

BLAST of CmoCh04G002100 vs. TAIR 10
Match: AT2G27080.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 109.8 bits (273), Expect = 4.1e-24
Identity = 75/237 (31.65%), Postives = 125/237 (52.74%), Query Frame = 0


Query: 17  ERPPPPP---------------PPPPSAPPPKVLPSKKT-RSSCVCKCFCWTFCVIFLLL 76
           ++P PPP               PPP +A   + L  KKT RS+C C CFC     +F+L+
Sbjct: 28  KKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCRC-CFCSFLAAVFILI 87

Query: 77  VVIGGVIGILYLVFKPKIPTYSINSLTISDLRLNLDMSLYARFDVKITAYNPNEKIGIYY 136
           V+ G    +LYL+++P+ P YSI   ++S + LN    +   F+V + + N N KIG+YY
Sbjct: 88  VLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYY 147

Query: 137 EKGGVLSVWYTDKKLCQGPLPVFYHGHRNRTALDVDLMGRTVKGNTLMAALAEQQRT--- 196
           EK   + V+Y D  +  G +PVFY   +N T + + L G  ++   L + + ++ R    
Sbjct: 148 EKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQ---LTSGMRKEMRNEVS 207

Query: 197 -GRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSLTA-NNAISIKAKRETEIF 233
              +P +L+  APV +K G +K   + +  +C + VD LTA +  +S K   + +++
Sbjct: 208 KKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDVDLW 260

The following BLAST results are available for this feature:

BLAST of CmoCh04G002100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LD98	4.4e-47	48.12	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]
Q9ZVD2	5.8e-23	31.65	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]
Q9FNH6	2.1e-09	27.40	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SJ54	2.2e-06	25.49	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9FI03	2.2e-06	25.45	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]

BLAST of CmoCh04G002100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWY3	1.1e-120	100.00	NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111447722 PE=4 SV=1	[more]
A0A6J1K4R4	5.6e-114	95.56	NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111491664 PE=4 SV=1	[more]
A0A0A0KQ99	2.3e-91	76.39	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182130 PE=4 ...	[more]
A0A5A7U340	9.7e-90	75.86	NDR1/HIN1-Like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CFA6	9.7e-90	75.86	NDR1/HIN1-Like protein 3 OS=Cucumis melo OX=3656 GN=LOC103500225 PE=4 SV=1	[more]

BLAST of CmoCh04G002100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942795.1	2.2e-120	100.00	NDR1/HIN1-like protein 6 [Cucurbita moschata]	[more]
XP_023515288.1	6.2e-115	95.15	NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo]	[more]
KAG7030716.1	1.2e-113	95.56	NDR1/HIN1-like protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022996441.1	1.2e-113	95.56	NDR1/HIN1-like protein 6 [Cucurbita maxima]	[more]
KAG6600045.1	1.3e-112	94.67	NDR1/HIN1-like protein 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh04G002100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54540.1	3.9e-59	53.07	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G36970.1	1.3e-49	46.50	NDR1/HIN1-like 25	[more]
AT1G65690.1	3.1e-48	48.12	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G27080.1	4.1e-24	31.65	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G27080.2	4.1e-24	31.65	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 106..200 e-value: 7.6E-8 score: 32.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..34
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 21..226
None	No IPR available	PANTHER	PTHR31852:SF195	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 21..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G002100.1	CmoCh04G002100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane