CmoCh04G001560 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G001560
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionnuclear pore complex protein NUP88-like
LocationCmo_Chr04: 818974 .. 826126 (+)
RNA-Seq ExpressionCmoCh04G001560
SyntenyCmoCh04G001560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGTCAACAACTTCCCCCCCTCTCTCTCTAGTCCTCTTCTTTGATGAGCTTAAAAATGTCCAACTCCCCATTTTCCTTCACCCACCTTCGTTCTACATACCCACCACCACAACACCAAGAACAGGGCAAGCCAGAGCTCTAAAGAAACAGAGCAAAAACCCCCCAAGAACAGAGCAGAAGCAATCCAATTCGGACAAATGGGTTTCCTAAAGGAAGAGAAATCGAAGCGTTTATGGAGAGGAATCAAGACCCTTTTCGTCTTAATCACCATGTTGATTTCCCTTCTCCTTTTCTCTGCCCCTGTTCTTCTCGTTATTGCCGATGCCCTTCTCTCTGCTTCTCTTTACCCTTACTCTTTTTCCCTCAACTCCCTCCCATCCCATCTCAAAAACTACGATTTTCGATCCTCCCTTATCGATATCCCCCTGATTTCATTCGCCAGATCCGCCATCATTATTTGTAAGTTCTAATTAAGACACACCCATGTGGGTGGAATTGAGTTTGTTTGTTTGTTTCTTTCTGGGATTGCGTTTTGATTTAATTCCTCTGTTTGGGTGTAGGTGTTTATAGCTTTTGCGATGGACCCAGGCTCTCGCGAGGGCCGTATTTGGGGATCACGACGCTTTGTTCTGTGATTTCTTTGGTTTATGTTTCATTGAAGGCTTCGTTTGTGTTTGATGGAGACTTGTCGGATGTCCGTCGAGGAGGAGGGTATGCGAGAGGCATGGAGGTGGCTTTGTTTATGTGCTCTTTGGCTTTGGCTGTTGGACATGTCGCTGTGGCGTATAGAACGAGTTGCAGAGAGAGGAGGAAGCTCCTGGTTTACAAGATTGATATCGAAGCGGTAAGTGTTCGATGTTTTGCCTCTGAGAAACTTTGCTTCCAAATTCTTTTGAACTAATCTTTATTTATGACTATGTCAATGAATTATTGATATAAACTAATCTTTATTTATTCCATTATGATATTCTCTCCATGATTGATAATCTTTTTAATAAGAGAATTGATATGGGTTGGCAATTATATTCAATCGTAGTTGTCATATAGCTGTAATAGCATCAAGCACTTGATCATATGCCATGTGCTTCTAAGGCCACATTTTGGCATATCATAAGCCGAGCTTCCAAGGACTTGGGAGAATATTACTCAACATTCGTTATTCTTTCTAATTAGTGTCGACGAACTCCGTGTAGATTACATGGAAAAGATTCGAGAAATTGATTATTGTTAGAACAATGGACCTCTACATATTATAACATTGTGTTTTTTCGACTCTAGTTCATACGAGAATTGTGTTTATATGCCCCAGATCGTTACTACTTTTAACTGAACTAACTGTTTTCATTGTTTTTGTCTCAGGTTTCGGCTTGCAATAGTGGTTTTCCTAGGTACCAAAAGATTCTTCAAGAGGAAAGAGTGAAGTAAAAACACCATCTCGGGAGATCAAAACTTGTTTCCATCTAACTTGTTTCACCCCAGTCTTCGGGTTCAGGTGAGGTTATGAAAATTTTCAACACATTTTCTTTAACATCACTGCATTTACCAACAAAAACATTACAAAACAGAGTTATGTTAAACACGTTGAGAATAGAGAAAGTGCACACAAGTTTTTCATTCTCGAAGCATCTTATTTGGGATCTGATTTCAACTTGTTTCTTTGTGATACAGATTTTTAGGTAATGACTTGAAATCAGTGGTTTTGGAGATTTGGGAGGTGCAAAGCTTACTAACATCTTAATGTTGTCTGTAAATTTGTTGGTTGGGTCATACTGGTGATATAGAAACATAGGATAAATTTACCTCATATTTAAGCATCAAGTTTATGTGATGTAAAATGTATAGTTTGGATCGGAACAAATAAAAATGGTAAAGAACCTTGTGATCTTATTACGATGGTTCGTTCGGCTTCAATCCCCCTCTCGATTCTTTTGCCGACACACAATTTTCATGAAATTGAAAATATTTGTTTTTATTGTTATATAATTAAATAGTCGCTGAATATATTTAAAGATGGTTTAAGATATGTAAATAACATCTAAAAGCAAATTAGACCGCCTCAAAAATAAAAAAAATTTAATGATAATTTTAATTTATTTATAATTAATTGGTTTTAATTATATGTCTATTAATTTTTTTTAAAAAAAATTATGTTTCTAAGATTTTGGAATTTAAAAAATGTAAATTTTCAAAATTTAATGACTAATTTAAAAAATGTATCAAAGCTAAGTTAATGCGCCTCTAACTTCGACAAGAACTTCGGCTTCTCCATTCGAAAGCAAGATCGGCGATAACACGGTTCCAGAACGACGATGAGGTATAATTTGGACCTGAACGAAGCTGATTCTGAACCCCGTCGATCTCTAACCCCAAAACGGGACGTCGATTGGGTTCCTCTCAAGACCCACCCCGTTTTCACCGCCGCCACTGCCGTCGACTATGGCGATTCTGTTTCTCCGCCTCTCAGAAGCCTTCTGGTCTCGGACGGCGCCTCTCGTCTCTACTTTTGGGACTCCACTAAACTTTGCTTGCACCGGATTTCCATCCGCCTCGGAGAACCCGAACCCACCTCCGTCCTCGCCGCTTCTCCTTCTAAAGTCAGTTCACTTCCCTCGTTTCTCTTTCTGAAGCAGATTTTAGAGAGCAAATCCCTTTGTTCTGAACTGTTCTATGTTATGTTTTCCCCCATTTTTTCTAGTCATTCTTCATAATCTCAGTTGCTTTGAACAGGTGTTGCAACCAGATGTGCCACTCGACTTCGTGGTGCATAAGATTTCCATCAATAAGAATGGATCGGCAATAGCCCTTGTGGGTCCAGGCGGGTTGTGGATAATGTACCTCTATGGTCACAGTTCGACCAGAGATAGTAGCACTGTCATCTGTAGGTGAGGAGGAGCCACTGCCTTAGTTAATGCTTTAAGTTTTTTCTTATATGTTGTTGTTTGCTTATGTTAAGCTTCAAAGGTTCATACGTCTTGTTCTTATGTTTCCCATTTTATGTATAAGGATGTCATAACACGTTTTCCACCAAGTTCTTTCTTAAAGAATCTGTCAATTGCTTACAGGACTGTTAGAGTTGGTCCACAAATCTACTATGGTGACCACGATGTCATACGCACGCTTCAAGTTTCTTGGCACCCATATAGTAACTTCCATCTTGGAGTCCTTTCATCTGATTCTGTTTTCAGGTACTAAATTTCCTGAATAAAGACATTTTATGCATATTTCATGAAGGAAATGCTTATATCTACTGCAATTTCATTTTGAATACTTAGTTAGACATTTTATGGGCCTTACAAGTGAACTTGAGTATAATCATCGAGGCTTAGGGGTAGGTTTTCAACATATTGTAGCTTTTTAAAGGTTTGGGGTCATGCTTCGCTGCTTGAATTTTTGTTGTTATTCCTGTCAAATATTTCAATATGTGGCTTCAACCAATGTCCTTATAATGCCAAAGACCCAAATATAACTTTGTGAAAAATTTAGGGTGAAATGTAGTTCTTGAAAGTATGACAAAATCTTGTTACTACTAGTCTACTGGGAATGGAGAGTAGAATTTTTGTTCGTTATTCACCCTTTCCGGGAAAGTGGCTTAAGAACAGTTCACTGATCACCTGTCCTGAATGGACTCCTTTTTTCTCGTTCAAGATTGCATTCAGAAAACTATATGTAGCTTGTTGCAAATAATTAAGTATAAGATTCCTCTTTGTAGAGATGGTACTGATATTTCAAAATATGAAGTTTGTCTATGTTTGCTCCATCGTGCGTGGTTGATTAACCATAAAAATCAAATTCCTTCTTAATGTTGCCATTGCAACGCAGTTTTTCCTGAACATCTGATCTGGGGTGGCTTATTCTTCAACTCCTTTTCATTTCAGGCTTTTCAATTTGTCTTCAGATGGTGTGCAACCAGAGCAAGAATATTATCTACAGCCAGTGGAACCTGGTCAATCTAAAAATGCCTCGTCAATCTGCCCTGTTGATTTTTCATTTGGGGGAGATCACTTGTGGGATAAGTTCAGTGTAAGAACATTCATTGGAAATTTTTCATCTCAAATTTGGATAATTTAATATTTTTTCTTTATAATGATGAAAACTTATCTCATTGGCTTTCCGTTTTATCTTGCCCAGATATTTACTTTGAGCATTCTATTTTTTATGATTAATTCGATGTTGTGTCAACACATAAATCAAAAGTTCAACCTGTTCTTATGACTTCTTTTGCAATCTCCTCCACTAACTTTCTATGTTCTGTCCATTTGGTGCTCCACTATGCCTTTAGAATCGGTAATCTCAAGCCAGATTAAATTTTTATATCTTGCTATGCATTAAAATGTATGCATTCAGGATATTTCAGTAAACTTCTCAATGTGTAGGATCTTAAATCTGATGTTAGTTCTACTTCTCAATGCATGAAAAACTGTTGCTTTCTTCTTTATACCATGGCGAGTGGCTAAGATTCATCCCTTAAACAGTTTAAGGACCAACATTACAATTTAAAAAATCCACTCACGCACTATACCTGCAGGTGTTCGTTTTATTCAGCGATGGTTCAATTTACATCCTCTGCCCTGTTGTTCCATTTAGAAGGTACTCAATTTCTCACATCTATCCTTTAAATGACTATTGGATATCAAGAACATTCAATTACAATTACTGAAGACAGACACTTATTTGTTTCTCGTTCTTCACATATTTAGTTGTGTAAAATATGTCAAGATGATATTCAGAGGGGATGCTTTCCCCCATCGTCTATCATGAAATCATAAATGATGTATCAAGTTTCCACTTTTGAACTACAAGAAAATCTTGCGTCTCACTAGTGCCTTATAACCATATATTACTATCTCTAAGTCGGTGCTTTGTCCTTGACAGCACTTACAAGTGCGAATCTATATTGGAGATTTATAATGATGCTCAGTCCTTTGGGTTAAAATCAGCCAATCCAACAGCTGTCAGTAATTCCAGTCTTGCAATCTCTTGGTTGGAAGAAACTTTTCCAAACTTAGTTCAAGCAACAAGTGGAGGAGATATGACTGTGATAGTAGCCCATCCTTGTGCTTTATTTGATGCGTCACTTGCATTGCAGGTATGAGACATTTTCAGTGGATGCATTTGGTGGTTGGCAATGTCCCTAGATTATATATATCTATATATCTATATATCTATATGTGTGTGTGTGTTATTATCAAATTGTTAGTGGTATGGCATGTGCATGGGTTGTAGTATACTCTTAGTTCTGGGTTTAGTGGAATCCTTAATCTTCATATGACATGGTCTTCCAGGGGCCTTTGAGGAGAGCATGTAATAATGGAAATGAAGGAGATATATCAATTAAAGGTGCAGAATGTGAAGGTCGTGCAGTAAGTTTACTATATAAGCTAATCAGCAAAGACTCAGTTCTTGTGACAGCGTGGAGTGGTGGGCAACTGCAGATAGATGCCCTTGCGGATGAAATTCAACCTGTCTGGAACCTTGGTAGTCCCCCACGTGTACATGTTGATCCGAACGACAATATTCTTGGACATGCTATGATATGTGAACCGATCACAGGGAAGCTCTCCGAGGTGAAGCTTGATCAACCACTTGATTACACAGTTTGGATGGGGCTCCCTCCCCCTTTGCTGAGACTGGCTATTGTAGATCTGGCCCTTCCAAAGAAGATGGAGAGATGCTCTCTTATAATGATGTTTGTCGATAAACTTATGGATGAAAGAATTTATGCTCTTCATAATGGAGGTATTGACTCAATTATATTGCATTTTCTCCCATTCACGAGTCAAAGCAGAGGACAGGACCAGACTATGAAAACTCCCTCTGTTCATCCTGTTCTGAATACCTGCCAGGGAGACACTTCCAACCCATTTCCGCTTTGTGGTTTCGCCTCATTATCCGATTCATTTGGATATTCTTGGATTGTGGGAGTCACCATTTCTCAGGAATGTATTGTTCTAGAAATGAAGACTTGGAACCTTCAAGTCCCAGTTCAGTTTAGCAATTTCCTAAATGAGGAGAAATTAGCTGCCACAGCGACAGGAGAGAAGAACGAAAGTGAAAGATCCGAAATTATAAGCAAAAATCTTCTCAGCGGACCTAAGGTGGTTCTCCTTCCTCAATCCTCATCAAATATGCGTTCTGTGACTGCTGATTCGATCGAAGGTCGGTCCATGCTTCATCAGTATTTCAAGCTCTTCCATGAAAATTATGTGGAGTATGCACACACGGTAATTGCAAATCTACTGCAGAACTATGAAGTGTTTTGTCAACTACTTCAGATAATTTAGATAGTTCAGCGCTGTGTGTGTAATATCTAAATTTCCCCTTCCTTCTTACCTTCTACCTCCTGTAGGTATACTATGAGCTCAAGCAGCATGGGCCCGAGTTGAAGAGGTTAATTGACGATCAGCAAACTCGTTTAAGAGAGGCACAGCAAAAGCTCTTAAAAGTAAGAGGGAAACAGGAACTATTGGAGGACAGGATAGAACGTGCAATCAAACTGCACAATGTTCTGGAAGAACGGATACATCGGTTGAAGAACTTGCCAGGAGCTCACAAAAGGCCATTGTCCAAAGCAGAAAGAGAGTTCAAATCGACACTTGGTAATAAATTCTCAGCCACGATACTTGAATCTTTTTGCTTGCTTATGACTAATTAAAATCAATTTCATTTGATATTTGAAAGAGTGAAAAGTGTTCCTTAGCCTATTAAATTACATATCTAAAACTGTTTGGTTACTTAGTTAAGCATGTATAGAAGAAATGGGTTTAAATGCATTATGAACTTCGAACTTTTAGATTTGCCCATTTCTTGAAAATGAAGAAACCCAAATATGGAGTTGAGTTCATAAATTTCATATTATGACAAAATAATACTTTGTTGCCATCCAGACCACTTTACAGGTGTGGAGGTGGATGCTTTGCATACTTCAATCGATACACTAACTGCAAGACTAAGGAGGTACACCAATTCTTCAAAGAACAACAATCTTGTAAACCAACAGCACAAAATTCACAGGAGAAACACCTGTGTTCAAGGCTCTCAGATCTCCCAACTCAAATCTTCGCTTGAGAAACTCTCCCTTCTCAATGCTGAGAATGCCAAAAAGGTTAAACTAGTTGAATCTACAATCAAAAGCAAGGAAGCGAACCGATGCTGA

mRNA sequence

GAGTCAACAACTTCCCCCCCTCTCTCTCTAGTCCTCTTCTTTGATGAGCTTAAAAATGTCCAACTCCCCATTTTCCTTCACCCACCTTCGTTCTACATACCCACCACCACAACACCAAGAACAGGGCAAGCCAGAGCTCTAAAGAAACAGAGCAAAAACCCCCCAAGAACAGAGCAGAAGCAATCCAATTCGGACAAATGGGTTTCCTAAAGGAAGAGAAATCGAAGCGTTTATGGAGAGGAATCAAGACCCTTTTCGTCTTAATCACCATGTTGATTTCCCTTCTCCTTTTCTCTGCCCCTGTTCTTCTCGTTATTGCCGATGCCCTTCTCTCTGCTTCTCTTTACCCTTACTCTTTTTCCCTCAACTCCCTCCCATCCCATCTCAAAAACTACGATTTTCGATCCTCCCTTATCGATATCCCCCTGATTTCATTCGCCAGATCCGCCATCATTATTTGTGTTTATAGCTTTTGCGATGGACCCAGGCTCTCGCGAGGGCCGTATTTGGGGATCACGACGCTTTGTTCTGTGATTTCTTTGGTTTATGTTTCATTGAAGGCTTCGTTTGTGTTTGATGGAGACTTGTCGGATGTCCGTCGAGGAGGAGGGTATGCGAGAGGCATGGAGGTGGCTTTGTTTATGTGCTCTTTGGCTTTGGCTGTTGGACATGTCGCTGTGGCGTATAGAACGAGTTGCAGAGAGAGGAGGAAGCTCCTGGTTTACAAGATTGATATCGAAGCGGTTTCGGCTTGCAATAGTGGTTTTCCTAGTCTTCGGGTTCAGATTTTTAGAACGACGATGAGGTATAATTTGGACCTGAACGAAGCTGATTCTGAACCCCGTCGATCTCTAACCCCAAAACGGGACGTCGATTGGGTTCCTCTCAAGACCCACCCCGTTTTCACCGCCGCCACTGCCGTCGACTATGGCGATTCTGTTTCTCCGCCTCTCAGAAGCCTTCTGGTCTCGGACGGCGCCTCTCGTCTCTACTTTTGGGACTCCACTAAACTTTGCTTGCACCGGATTTCCATCCGCCTCGGAGAACCCGAACCCACCTCCGTCCTCGCCGCTTCTCCTTCTAAAGTGTTGCAACCAGATGTGCCACTCGACTTCGTGGTGCATAAGATTTCCATCAATAAGAATGGATCGGCAATAGCCCTTGTGGGTCCAGGCGGGTTGTGGATAATGTACCTCTATGGTCACAGTTCGACCAGAGATAGTAGCACTGTCATCTGTAGGACTGTTAGAGTTGGTCCACAAATCTACTATGGTGACCACGATGTCATACGCACGCTTCAAGTTTCTTGGCACCCATATAGTAACTTCCATCTTGGAGTCCTTTCATCTGATTCTGTTTTCAGGCTTTTCAATTTGTCTTCAGATGGTGTGCAACCAGAGCAAGAATATTATCTACAGCCAGTGGAACCTGGTCAATCTAAAAATGCCTCGTCAATCTGCCCTGTTGATTTTTCATTTGGGGGAGATCACTTGTGGGATAAGTTCAGTGTGTTCGTTTTATTCAGCGATGGTTCAATTTACATCCTCTGCCCTGTTGTTCCATTTAGAAGCACTTACAAGTGCGAATCTATATTGGAGATTTATAATGATGCTCAGTCCTTTGGGTTAAAATCAGCCAATCCAACAGCTGTCAGTAATTCCAGTCTTGCAATCTCTTGGTTGGAAGAAACTTTTCCAAACTTAGTTCAAGCAACAAGTGGAGGAGATATGACTGTGATAGTAGCCCATCCTTGTGCTTTATTTGATGCGTCACTTGCATTGCAGGGGCCTTTGAGGAGAGCATGTAATAATGGAAATGAAGGAGATATATCAATTAAAGGTGCAGAATGTGAAGGTCGTGCAGTAAGTTTACTATATAAGCTAATCAGCAAAGACTCAGTTCTTGTGACAGCGTGGAGTGGTGGGCAACTGCAGATAGATGCCCTTGCGGATGAAATTCAACCTGTCTGGAACCTTGGTAGTCCCCCACGTGTACATGTTGATCCGAACGACAATATTCTTGGACATGCTATGATATGTGAACCGATCACAGGGAAGCTCTCCGAGGTGAAGCTTGATCAACCACTTGATTACACAGTTTGGATGGGGCTCCCTCCCCCTTTGCTGAGACTGGCTATTGTAGATCTGGCCCTTCCAAAGAAGATGGAGAGATGCTCTCTTATAATGATGTTTGTCGATAAACTTATGGATGAAAGAATTTATGCTCTTCATAATGGAGGTATTGACTCAATTATATTGCATTTTCTCCCATTCACGAGTCAAAGCAGAGGACAGGACCAGACTATGAAAACTCCCTCTGTTCATCCTGTTCTGAATACCTGCCAGGGAGACACTTCCAACCCATTTCCGCTTTGTGGTTTCGCCTCATTATCCGATTCATTTGGATATTCTTGGATTGTGGGAGTCACCATTTCTCAGGAATGTATTGTTCTAGAAATGAAGACTTGGAACCTTCAAGTCCCAGTTCAGTTTAGCAATTTCCTAAATGAGGAGAAATTAGCTGCCACAGCGACAGGAGAGAAGAACGAAAGTGAAAGATCCGAAATTATAAGCAAAAATCTTCTCAGCGGACCTAAGGTGGTTCTCCTTCCTCAATCCTCATCAAATATGCGTTCTGTGACTGCTGATTCGATCGAAGGTCGGTCCATGCTTCATCAGTATTTCAAGCTCTTCCATGAAAATTATGTGGAGTATGCACACACGGTATACTATGAGCTCAAGCAGCATGGGCCCGAGTTGAAGAGGTTAATTGACGATCAGCAAACTCGTTTAAGAGAGGCACAGCAAAAGCTCTTAAAAGTAAGAGGGAAACAGGAACTATTGGAGGACAGGATAGAACGTGCAATCAAACTGCACAATGTTCTGGAAGAACGGATACATCGGTTGAAGAACTTGCCAGGAGCTCACAAAAGGCCATTGTCCAAAGCAGAAAGAGAGTTCAAATCGACACTTGACCACTTTACAGGTGTGGAGGTGGATGCTTTGCATACTTCAATCGATACACTAACTGCAAGACTAAGGAGGTACACCAATTCTTCAAAGAACAACAATCTTGTAAACCAACAGCACAAAATTCACAGGAGAAACACCTGTGTTCAAGGCTCTCAGATCTCCCAACTCAAATCTTCGCTTGAGAAACTCTCCCTTCTCAATGCTGAGAATGCCAAAAAGGTTAAACTAGTTGAATCTACAATCAAAAGCAAGGAAGCGAACCGATGCTGA

Coding sequence (CDS)

ATGGGTTTCCTAAAGGAAGAGAAATCGAAGCGTTTATGGAGAGGAATCAAGACCCTTTTCGTCTTAATCACCATGTTGATTTCCCTTCTCCTTTTCTCTGCCCCTGTTCTTCTCGTTATTGCCGATGCCCTTCTCTCTGCTTCTCTTTACCCTTACTCTTTTTCCCTCAACTCCCTCCCATCCCATCTCAAAAACTACGATTTTCGATCCTCCCTTATCGATATCCCCCTGATTTCATTCGCCAGATCCGCCATCATTATTTGTGTTTATAGCTTTTGCGATGGACCCAGGCTCTCGCGAGGGCCGTATTTGGGGATCACGACGCTTTGTTCTGTGATTTCTTTGGTTTATGTTTCATTGAAGGCTTCGTTTGTGTTTGATGGAGACTTGTCGGATGTCCGTCGAGGAGGAGGGTATGCGAGAGGCATGGAGGTGGCTTTGTTTATGTGCTCTTTGGCTTTGGCTGTTGGACATGTCGCTGTGGCGTATAGAACGAGTTGCAGAGAGAGGAGGAAGCTCCTGGTTTACAAGATTGATATCGAAGCGGTTTCGGCTTGCAATAGTGGTTTTCCTAGTCTTCGGGTTCAGATTTTTAGAACGACGATGAGGTATAATTTGGACCTGAACGAAGCTGATTCTGAACCCCGTCGATCTCTAACCCCAAAACGGGACGTCGATTGGGTTCCTCTCAAGACCCACCCCGTTTTCACCGCCGCCACTGCCGTCGACTATGGCGATTCTGTTTCTCCGCCTCTCAGAAGCCTTCTGGTCTCGGACGGCGCCTCTCGTCTCTACTTTTGGGACTCCACTAAACTTTGCTTGCACCGGATTTCCATCCGCCTCGGAGAACCCGAACCCACCTCCGTCCTCGCCGCTTCTCCTTCTAAAGTGTTGCAACCAGATGTGCCACTCGACTTCGTGGTGCATAAGATTTCCATCAATAAGAATGGATCGGCAATAGCCCTTGTGGGTCCAGGCGGGTTGTGGATAATGTACCTCTATGGTCACAGTTCGACCAGAGATAGTAGCACTGTCATCTGTAGGACTGTTAGAGTTGGTCCACAAATCTACTATGGTGACCACGATGTCATACGCACGCTTCAAGTTTCTTGGCACCCATATAGTAACTTCCATCTTGGAGTCCTTTCATCTGATTCTGTTTTCAGGCTTTTCAATTTGTCTTCAGATGGTGTGCAACCAGAGCAAGAATATTATCTACAGCCAGTGGAACCTGGTCAATCTAAAAATGCCTCGTCAATCTGCCCTGTTGATTTTTCATTTGGGGGAGATCACTTGTGGGATAAGTTCAGTGTGTTCGTTTTATTCAGCGATGGTTCAATTTACATCCTCTGCCCTGTTGTTCCATTTAGAAGCACTTACAAGTGCGAATCTATATTGGAGATTTATAATGATGCTCAGTCCTTTGGGTTAAAATCAGCCAATCCAACAGCTGTCAGTAATTCCAGTCTTGCAATCTCTTGGTTGGAAGAAACTTTTCCAAACTTAGTTCAAGCAACAAGTGGAGGAGATATGACTGTGATAGTAGCCCATCCTTGTGCTTTATTTGATGCGTCACTTGCATTGCAGGGGCCTTTGAGGAGAGCATGTAATAATGGAAATGAAGGAGATATATCAATTAAAGGTGCAGAATGTGAAGGTCGTGCAGTAAGTTTACTATATAAGCTAATCAGCAAAGACTCAGTTCTTGTGACAGCGTGGAGTGGTGGGCAACTGCAGATAGATGCCCTTGCGGATGAAATTCAACCTGTCTGGAACCTTGGTAGTCCCCCACGTGTACATGTTGATCCGAACGACAATATTCTTGGACATGCTATGATATGTGAACCGATCACAGGGAAGCTCTCCGAGGTGAAGCTTGATCAACCACTTGATTACACAGTTTGGATGGGGCTCCCTCCCCCTTTGCTGAGACTGGCTATTGTAGATCTGGCCCTTCCAAAGAAGATGGAGAGATGCTCTCTTATAATGATGTTTGTCGATAAACTTATGGATGAAAGAATTTATGCTCTTCATAATGGAGGTATTGACTCAATTATATTGCATTTTCTCCCATTCACGAGTCAAAGCAGAGGACAGGACCAGACTATGAAAACTCCCTCTGTTCATCCTGTTCTGAATACCTGCCAGGGAGACACTTCCAACCCATTTCCGCTTTGTGGTTTCGCCTCATTATCCGATTCATTTGGATATTCTTGGATTGTGGGAGTCACCATTTCTCAGGAATGTATTGTTCTAGAAATGAAGACTTGGAACCTTCAAGTCCCAGTTCAGTTTAGCAATTTCCTAAATGAGGAGAAATTAGCTGCCACAGCGACAGGAGAGAAGAACGAAAGTGAAAGATCCGAAATTATAAGCAAAAATCTTCTCAGCGGACCTAAGGTGGTTCTCCTTCCTCAATCCTCATCAAATATGCGTTCTGTGACTGCTGATTCGATCGAAGGTCGGTCCATGCTTCATCAGTATTTCAAGCTCTTCCATGAAAATTATGTGGAGTATGCACACACGGTATACTATGAGCTCAAGCAGCATGGGCCCGAGTTGAAGAGGTTAATTGACGATCAGCAAACTCGTTTAAGAGAGGCACAGCAAAAGCTCTTAAAAGTAAGAGGGAAACAGGAACTATTGGAGGACAGGATAGAACGTGCAATCAAACTGCACAATGTTCTGGAAGAACGGATACATCGGTTGAAGAACTTGCCAGGAGCTCACAAAAGGCCATTGTCCAAAGCAGAAAGAGAGTTCAAATCGACACTTGACCACTTTACAGGTGTGGAGGTGGATGCTTTGCATACTTCAATCGATACACTAACTGCAAGACTAAGGAGGTACACCAATTCTTCAAAGAACAACAATCTTGTAAACCAACAGCACAAAATTCACAGGAGAAACACCTGTGTTCAAGGCTCTCAGATCTCCCAACTCAAATCTTCGCTTGAGAAACTCTCCCTTCTCAATGCTGAGAATGCCAAAAAGGTTAAACTAGTTGAATCTACAATCAAAAGCAAGGAAGCGAACCGATGCTGA

Protein sequence

MGFLKEEKSKRLWRGIKTLFVLITMLISLLLFSAPVLLVIADALLSASLYPYSFSLNSLPSHLKNYDFRSSLIDIPLISFARSAIIICVYSFCDGPRLSRGPYLGITTLCSVISLVYVSLKASFVFDGDLSDVRRGGGYARGMEVALFMCSLALAVGHVAVAYRTSCRERRKLLVYKIDIEAVSACNSGFPSLRVQIFRTTMRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIALVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGVLSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPNLVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYKLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKLSEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGGIDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIVGVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQQTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREFKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQLKSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Homology
[Close]
BLAST of CmoCh04G001560 vs. ExPASy Swiss-Prot
Match: Q9FFK6 (Nuclear pore complex protein NUP88 OS=Arabidopsis thaliana OX=3702 GN=NUP88 PE=1 SV=1)

HSP 1 Score: 897.9 bits (2319), Expect = 1.1e-259
Identity = 461/814 (56.63%), Postives = 599/814 (73.59%), Query Frame = 0 

Query: 202  MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPL-RSLLVSDG 261
            M++N +  E   + RRS TPK  V WVPL++HPVF +  +     +VS    R+ +  DG
Sbjct: 1    MKFNFNETEDAPDSRRSPTPKEPVRWVPLQSHPVFASLPSSQDEPAVSQLFPRNFMAWDG 60

Query: 262  ASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAI 321
             SR+Y+WDS +  LHR+S+RLGEPEP+SVLAA PSKV+QPD+ + F V KISINK+GSA+
Sbjct: 61   DSRVYYWDSRRYLLHRLSLRLGEPEPSSVLAAVPSKVMQPDLQVTFSVSKISINKSGSAV 120

Query: 322  ALVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLG 381
             L G  G+ +MYL+G +S  + + VICR V +G +IY      I  LQ SWHP S+ HLG
Sbjct: 121  LLAGSDGICVMYLFGRASVIEDN-VICRVVSIGSEIYTSSDSAITLLQASWHPDSDTHLG 180

Query: 382  VLSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFV 441
            +LSSD+VFRLF+LSSD   PEQEYYLQP EPG+S+ ASSI P DFSFGGDHLWD+F+VF+
Sbjct: 181  ILSSDAVFRLFDLSSDTELPEQEYYLQPGEPGRSRTASSIYPADFSFGGDHLWDRFTVFI 240

Query: 442  LFSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFP 501
            LF+DGSIYILCPVVPF S YK ES++EIYNDA  +G+KS+N  AVSNSSLAI WLE TFP
Sbjct: 241  LFTDGSIYILCPVVPFGSVYKWESVMEIYNDANMYGVKSSNSLAVSNSSLAIEWLEATFP 300

Query: 502  NLV-QATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLL 561
            +L  Q T G ++ V+ A P AL DASLALQGPL +A +   + D +++ AEC+GRAVSLL
Sbjct: 301  DLTEQGTRGENILVVKAQPYALLDASLALQGPLYKASSGDGDEDFAVREAECKGRAVSLL 360

Query: 562  YKLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITG 621
            Y L+SKDS+LVTAWS GQLQ+DAL DEIQPVW  G+  R+ ++ ++ I G AMICE    
Sbjct: 361  YNLVSKDSILVTAWSAGQLQVDALVDEIQPVWISGNSSRLRMNSHNKIQGVAMICESNIS 420

Query: 622  KLSEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHN 681
            +L     + PLD+TVW+G PPPLLRLA+VDLALPK  E  SL+ +F D L+ ERIY+LH+
Sbjct: 421  ELPVATSNLPLDHTVWLGHPPPLLRLAMVDLALPKMREGGSLVTLFADSLLPERIYSLHD 480

Query: 682  GGIDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSW 741
            GGIDS +LH LPFTSQ+ G+D+ +KTPSVH VL+TCQ + S   PL GF  LSDSFGYSW
Sbjct: 481  GGIDSTVLHSLPFTSQASGKDEALKTPSVHTVLSTCQ-EESAVSPLLGFVPLSDSFGYSW 540

Query: 742  IVGVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGP 801
            IV V  S ECIV EMKTW+L +P+  S     +K  +++  EK E E S IISK LL+GP
Sbjct: 541  IVAVLSSGECIVAEMKTWDLLLPIHVST----DKTVSSSAIEKKEQENSCIISKELLAGP 600

Query: 802  KVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLID 861
            K+ + P +  N RS  A+S+EGRS+L  Y KLFHENY+EYAH V++EL+ H P LKR+ID
Sbjct: 601  KIRIAPHALPNQRSTPANSVEGRSILLDYVKLFHENYIEYAHKVHFELQHHAPNLKRIID 660

Query: 862  DQQTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAER 921
            DQ  RL EA +K+ KV   Q  LE RI++AI+ H+ LE+ + RL++LPG HK+PL++AE 
Sbjct: 661  DQHQRLAEANEKISKVEKNQSFLEKRIDKAIERHDSLEQCLQRLRSLPGTHKKPLTRAEL 720

Query: 922  EFKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLV-NQQHKIHRRNTCVQGSQI 981
            +FKS LD + GVEVDAL +SI+TL AR+++ T  S    +V   Q K + +   +Q +Q+
Sbjct: 721  DFKSELDQYAGVEVDALQSSIETLRARVKKSTQKSHKGTVVAASQKKQYSKKNLIQDTQM 780

Query: 982  SQLKSSLEKLSLLNAENAKKVKLVESTIKSKEAN 1013
            SQL+S+L KLSL+N++N+KKVK+VES +KS+E++
Sbjct: 781  SQLQSTLAKLSLMNSDNSKKVKIVESALKSQESS 808

[Close]
BLAST of CmoCh04G001560 vs. ExPASy TrEMBL
Match: A0A6J1FTH0 (nuclear pore complex protein NUP88-like OS=Cucurbita moschata OX=3662 GN=LOC111447977 PE=4 SV=1)

HSP 1 Score: 1624.0 bits (4204), Expect = 0.0e+00
Identity = 813/813 (100.00%), Postives = 813/813 (100.00%), Query Frame = 0 

Query: 202  MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 261
            MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA
Sbjct: 1    MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 262  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 321
            SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA
Sbjct: 61   SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 120

Query: 322  LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 381
            LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV
Sbjct: 121  LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 382  LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 441
            LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL
Sbjct: 181  LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 240

Query: 442  FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 501
            FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241  FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 502  LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 561
            LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK
Sbjct: 301  LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 562  LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 621
            LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL
Sbjct: 361  LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 420

Query: 622  SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 681
            SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG
Sbjct: 421  SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 682  IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 741
            IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV
Sbjct: 481  IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 742  GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 801
            GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV
Sbjct: 541  GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 802  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 861
            VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ
Sbjct: 601  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 862  QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 921
            QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF
Sbjct: 661  QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 922  KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 981
            KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL
Sbjct: 721  KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780

Query: 982  KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 1015
            KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Sbjct: 781  KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of CmoCh04G001560 vs. ExPASy TrEMBL
Match: A0A6J1JXJ0 (nuclear pore complex protein NUP88-like OS=Cucurbita maxima OX=3661 GN=LOC111490688 PE=4 SV=1)

HSP 1 Score: 1602.4 bits (4148), Expect = 0.0e+00
Identity = 802/813 (98.65%), Postives = 807/813 (99.26%), Query Frame = 0 

Query: 202  MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 261
            MRYNLDLNEADSEPRRSLTPK DVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA
Sbjct: 1    MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 262  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 321
            SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQP+VPLDF+VHKISINKNGSAIA
Sbjct: 61   SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120

Query: 322  LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 381
            LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV
Sbjct: 121  LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 382  LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 441
            LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVF+L
Sbjct: 181  LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240

Query: 442  FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 501
            FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241  FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 502  LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 561
            LVQAT GGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK
Sbjct: 301  LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 562  LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 621
            LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICE ITGKL
Sbjct: 361  LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420

Query: 622  SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 681
            SEVKLDQPLDYTVW+GLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG
Sbjct: 421  SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 682  IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 741
            IDSIILHFLPFTSQSRGQDQTM+TPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV
Sbjct: 481  IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 742  GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 801
            GVTISQECIVLEMKTWNLQVPVQFSNFLNE KLAATATGEKNESERSEIISKNLLSGPKV
Sbjct: 541  GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 802  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 861
            VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ
Sbjct: 601  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 862  QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 921
            QTRLREAQQKLLKV GKQELLEDRIE AIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF
Sbjct: 661  QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 922  KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 981
            KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL
Sbjct: 721  KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780

Query: 982  KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 1015
            KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Sbjct: 781  KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of CmoCh04G001560 vs. ExPASy TrEMBL
Match: A0A5A7UW69 (Nuclear pore complex protein NUP88 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00530 PE=4 SV=1)

HSP 1 Score: 1415.2 bits (3662), Expect = 0.0e+00
Identity = 717/820 (87.44%), Postives = 755/820 (92.07%), Query Frame = 0 

Query: 202  MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAV--------DYGDSVSPPLR 261
            MRYN DLNEADS+P RSLTPKRDVDW+PLKTHPVFT A A         DYG SVSPPLR
Sbjct: 1    MRYNFDLNEADSDPPRSLTPKRDVDWLPLKTHPVFTPAAAASTSTSSVDDYGVSVSPPLR 60

Query: 262  SLLVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISI 321
            +LLVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLA+SPSKVLQPDV LDFVV KISI
Sbjct: 61   NLLVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLASSPSKVLQPDVQLDFVVQKISI 120

Query: 322  NKNGSAIALVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHP 381
            N+NGSA+ALVG GGL IMYLYGHSSTRD++TVICRTVRVGPQIY G HDVIRTLQVSWHP
Sbjct: 121  NQNGSALALVGSGGLCIMYLYGHSSTRDNNTVICRTVRVGPQIYCGGHDVIRTLQVSWHP 180

Query: 382  YSNFHLGVLSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLW 441
            YSNFHLGVLSSDSVFRLFNLS+D VQPEQEYYLQPVEPGQSKNA+SICPVDFSFG DHLW
Sbjct: 181  YSNFHLGVLSSDSVFRLFNLSTDIVQPEQEYYLQPVEPGQSKNATSICPVDFSFGEDHLW 240

Query: 442  DKFSVFVLFSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAIS 501
            DKFSVFVLFSDGS+YILCPVVPFRS YKCESILEIYNDAQSFG KS NPTA+ NSSLAIS
Sbjct: 241  DKFSVFVLFSDGSVYILCPVVPFRSVYKCESILEIYNDAQSFGQKSPNPTAM-NSSLAIS 300

Query: 502  WLEETFPNLVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEG 561
            WLEETFPNLVQAT GGD  VIVA PCALFDASLALQGPLRRACNNG+EGDISIKGAECEG
Sbjct: 301  WLEETFPNLVQATDGGDAYVIVAQPCALFDASLALQGPLRRACNNGDEGDISIKGAECEG 360

Query: 562  RAVSLLYKLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMI 621
            RAVSLLY LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRV VDPNDNILG AMI
Sbjct: 361  RAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRVDPNDNILGLAMI 420

Query: 622  CEPITGKLSEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDER 681
            CE +T KL+ VKLD+PLD+TVW GLPPPLLRLAIVDLALPKKME+ SLI MF DKLMD+R
Sbjct: 421  CEVVTRKLTNVKLDEPLDHTVWSGLPPPLLRLAIVDLALPKKMEKDSLITMFADKLMDQR 480

Query: 682  IYALHNGGIDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSD 741
            IYALHNGGIDSIILHFLPFTSQSRGQ+QTM+TPSVHPVLNTCQGDTS+PFPLCGFASLSD
Sbjct: 481  IYALHNGGIDSIILHFLPFTSQSRGQNQTMRTPSVHPVLNTCQGDTSSPFPLCGFASLSD 540

Query: 742  SFGYSWIVGVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISK 801
            S GYSWI+GVTIS ECIVLEMKTWNL VPVQ SNF  E K A  ATGEKNESER EIISK
Sbjct: 541  SLGYSWILGVTISHECIVLEMKTWNLLVPVQVSNFQYEGKSATAATGEKNESERPEIISK 600

Query: 802  NLLSGPKVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPE 861
            +LL GPKVVLLPQ SS MRSVTADSIEGRSMLHQYFKLFHENYVEYAH VYYELKQH P+
Sbjct: 601  DLLGGPKVVLLPQPSSTMRSVTADSIEGRSMLHQYFKLFHENYVEYAHAVYYELKQHEPK 660

Query: 862  LKRLIDDQQTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRP 921
            LKRLI+DQQTRL+EAQQKL+KV GKQ+LL++RIE AIKLHNVLE RIHRLKNLPGAHK+P
Sbjct: 661  LKRLIEDQQTRLKEAQQKLIKVEGKQQLLDERIECAIKLHNVLENRIHRLKNLPGAHKKP 720

Query: 922  LSKAEREFKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCV 981
            LSKAEREFKSTLDHFT VE+DALHTSIDTLTARLRR+TNSSKNNNLVNQQ K++RRNT +
Sbjct: 721  LSKAEREFKSTLDHFTDVELDALHTSIDTLTARLRRFTNSSKNNNLVNQQQKMYRRNTYI 780

Query: 982  QGSQISQLKSSLEKLSLLNAENAKKVKLVESTIKSKEANR 1014
            QGSQISQLKSSLEKLSLLNAEN KKVKLVES I+SKE NR
Sbjct: 781  QGSQISQLKSSLEKLSLLNAENTKKVKLVESRIQSKERNR 819

[Close]
BLAST of CmoCh04G001560 vs. ExPASy TrEMBL
Match: A0A1S3CIR9 (nuclear pore complex protein NUP88 OS=Cucumis melo OX=3656 GN=LOC103501436 PE=4 SV=1)

HSP 1 Score: 1415.2 bits (3662), Expect = 0.0e+00
Identity = 717/820 (87.44%), Postives = 755/820 (92.07%), Query Frame = 0 

Query: 202  MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAV--------DYGDSVSPPLR 261
            MRYN DLNEADS+P RSLTPKRDVDW+PLKTHPVFT A A         DYG SVSPPLR
Sbjct: 1    MRYNFDLNEADSDPPRSLTPKRDVDWLPLKTHPVFTPAAAASTSTSSVDDYGVSVSPPLR 60

Query: 262  SLLVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISI 321
            +LLVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLA+SPSKVLQPDV LDFVV KISI
Sbjct: 61   NLLVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLASSPSKVLQPDVQLDFVVQKISI 120

Query: 322  NKNGSAIALVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHP 381
            N+NGSA+ALVG GGL IMYLYGHSSTRD++TVICRTVRVGPQIY G HDVIRTLQVSWHP
Sbjct: 121  NQNGSALALVGSGGLCIMYLYGHSSTRDNNTVICRTVRVGPQIYCGGHDVIRTLQVSWHP 180

Query: 382  YSNFHLGVLSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLW 441
            YSNFHLGVLSSDSVFRLFNLS+D VQPEQEYYLQPVEPGQSKNA+SICPVDFSFG DHLW
Sbjct: 181  YSNFHLGVLSSDSVFRLFNLSTDIVQPEQEYYLQPVEPGQSKNATSICPVDFSFGEDHLW 240

Query: 442  DKFSVFVLFSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAIS 501
            DKFSVFVLFSDGS+YILCPVVPFRS YKCESILEIYNDAQSFG KS NPTA+ NSSLAIS
Sbjct: 241  DKFSVFVLFSDGSVYILCPVVPFRSVYKCESILEIYNDAQSFGQKSPNPTAM-NSSLAIS 300

Query: 502  WLEETFPNLVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEG 561
            WLEETFPNLVQAT GGD  VIVA PCALFDASLALQGPLRRACNNG+EGDISIKGAECEG
Sbjct: 301  WLEETFPNLVQATDGGDAYVIVAQPCALFDASLALQGPLRRACNNGDEGDISIKGAECEG 360

Query: 562  RAVSLLYKLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMI 621
            RAVSLLY LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRV VDPNDNILG AMI
Sbjct: 361  RAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRVDPNDNILGLAMI 420

Query: 622  CEPITGKLSEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDER 681
            CE +T KL+ VKLD+PLD+TVW GLPPPLLRLAIVDLALPKKME+ SLI MF DKLMD+R
Sbjct: 421  CEVVTRKLTNVKLDEPLDHTVWSGLPPPLLRLAIVDLALPKKMEKDSLITMFADKLMDQR 480

Query: 682  IYALHNGGIDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSD 741
            IYALHNGGIDSIILHFLPFTSQSRGQ+QTM+TPSVHPVLNTCQGDTS+PFPLCGFASLSD
Sbjct: 481  IYALHNGGIDSIILHFLPFTSQSRGQNQTMRTPSVHPVLNTCQGDTSSPFPLCGFASLSD 540

Query: 742  SFGYSWIVGVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISK 801
            S GYSWI+GVTIS ECIVLEMKTWNL VPVQ SNF  E K A  ATGEKNESER EIISK
Sbjct: 541  SLGYSWILGVTISHECIVLEMKTWNLLVPVQVSNFQYEGKSATAATGEKNESERPEIISK 600

Query: 802  NLLSGPKVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPE 861
            +LL GPKVVLLPQ SS MRSVTADSIEGRSMLHQYFKLFHENYVEYAH VYYELKQH P+
Sbjct: 601  DLLGGPKVVLLPQPSSTMRSVTADSIEGRSMLHQYFKLFHENYVEYAHAVYYELKQHEPK 660

Query: 862  LKRLIDDQQTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRP 921
            LKRLI+DQQTRL+EAQQKL+KV GKQ+LL++RIE AIKLHNVLE RIHRLKNLPGAHK+P
Sbjct: 661  LKRLIEDQQTRLKEAQQKLIKVEGKQQLLDERIECAIKLHNVLENRIHRLKNLPGAHKKP 720

Query: 922  LSKAEREFKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCV 981
            LSKAEREFKSTLDHFT VE+DALHTSIDTLTARLRR+TNSSKNNNLVNQQ K++RRNT +
Sbjct: 721  LSKAEREFKSTLDHFTDVELDALHTSIDTLTARLRRFTNSSKNNNLVNQQQKMYRRNTYI 780

Query: 982  QGSQISQLKSSLEKLSLLNAENAKKVKLVESTIKSKEANR 1014
            QGSQISQLKSSLEKLSLLNAEN KKVKLVES I+SKE NR
Sbjct: 781  QGSQISQLKSSLEKLSLLNAENTKKVKLVESRIQSKERNR 819

[Close]
BLAST of CmoCh04G001560 vs. ExPASy TrEMBL
Match: A0A0A0KLW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G202340 PE=4 SV=1)

HSP 1 Score: 1414.4 bits (3660), Expect = 0.0e+00
Identity = 713/819 (87.06%), Postives = 760/819 (92.80%), Query Frame = 0 

Query: 202  MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFT-------AATAVDYGDSVSPPLRS 261
            MRYN DLN+ADS+P RSLTPKRDVDW+PLKTHP+FT       +++  DYG SVSPPLR+
Sbjct: 1    MRYNFDLNQADSDPPRSLTPKRDVDWLPLKTHPIFTPTSTSSSSSSGHDYGVSVSPPLRN 60

Query: 262  LLVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISIN 321
            LL SDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDV LDFVV KISIN
Sbjct: 61   LLASDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVQLDFVVQKISIN 120

Query: 322  KNGSAIALVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPY 381
            +NGSA+ALVG GGL IMYLYGHSST D++TVICRTVRVGPQIY G HDVIRTLQVSWHPY
Sbjct: 121  QNGSALALVGSGGLCIMYLYGHSSTSDNNTVICRTVRVGPQIYCGGHDVIRTLQVSWHPY 180

Query: 382  SNFHLGVLSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWD 441
            SNFHLGVLSSDSVFRLFNLS+D VQPEQEYYLQPVEPGQSKNA+SICPVDFSFG DHLWD
Sbjct: 181  SNFHLGVLSSDSVFRLFNLSTDLVQPEQEYYLQPVEPGQSKNATSICPVDFSFGEDHLWD 240

Query: 442  KFSVFVLFSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISW 501
            KFSVFVLFSDGSIYILCPVVPFRS YKCESILEIYNDAQSFGLKS NPTAV NSSLAISW
Sbjct: 241  KFSVFVLFSDGSIYILCPVVPFRSVYKCESILEIYNDAQSFGLKSPNPTAV-NSSLAISW 300

Query: 502  LEETFPNLVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGR 561
            LEETFPNLVQAT GGD  +IVA PCALFDASLALQGPLRRACNNG+EGDISIKGAECEGR
Sbjct: 301  LEETFPNLVQATDGGDAYMIVAQPCALFDASLALQGPLRRACNNGDEGDISIKGAECEGR 360

Query: 562  AVSLLYKLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMIC 621
            AVSLLY LISKDSVLVTAWSGGQLQIDALADEIQPVWNLG+PPRV VDPNDNILG AMIC
Sbjct: 361  AVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGNPPRVRVDPNDNILGLAMIC 420

Query: 622  EPITGKLSEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERI 681
            E +T KL++VKLDQPLD+TVW GLPPPLLRLAIVDLALPKKME+ SLI MF DKLMD+RI
Sbjct: 421  EVVTRKLTKVKLDQPLDHTVWSGLPPPLLRLAIVDLALPKKMEKDSLITMFADKLMDQRI 480

Query: 682  YALHNGGIDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDS 741
            YALHNGGIDSIILHFLPFTSQSRGQ+QTM+TPSVHPVLNTCQGDTS+PFPLCGFASLSDS
Sbjct: 481  YALHNGGIDSIILHFLPFTSQSRGQNQTMRTPSVHPVLNTCQGDTSSPFPLCGFASLSDS 540

Query: 742  FGYSWIVGVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKN 801
             GYSWI+G+T+S ECIVLEMKTWNL VPVQ SNFL E K AA ATGE+NESER EIISK+
Sbjct: 541  LGYSWILGITLSHECIVLEMKTWNLLVPVQVSNFLYEGKSAAAATGERNESERPEIISKD 600

Query: 802  LLSGPKVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPEL 861
            LL GPKVVLLPQSSS MRSVTADSIEGRSMLHQYFKLFHENYVEYAH VYYELKQH P+L
Sbjct: 601  LLGGPKVVLLPQSSSTMRSVTADSIEGRSMLHQYFKLFHENYVEYAHAVYYELKQHEPKL 660

Query: 862  KRLIDDQQTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPL 921
            KRLI+DQQTRL++AQQKL+KV GKQ+LL+DRIERAI+LHNVLEERI RLKNLPGAHK+PL
Sbjct: 661  KRLIEDQQTRLKDAQQKLIKVEGKQQLLDDRIERAIELHNVLEERIRRLKNLPGAHKKPL 720

Query: 922  SKAEREFKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQ 981
            SKAEREFKSTLDHFT VE+DALHTSIDTLTARLRR+TNSSKNNN+VNQQ K++RRNT +Q
Sbjct: 721  SKAEREFKSTLDHFTDVELDALHTSIDTLTARLRRFTNSSKNNNIVNQQQKMYRRNTYIQ 780

Query: 982  GSQISQLKSSLEKLSLLNAENAKKVKLVESTIKSKEANR 1014
            GSQISQLKSSLEKLSLLNAEN  KVKLVESTI+SKE NR
Sbjct: 781  GSQISQLKSSLEKLSLLNAENTIKVKLVESTIQSKERNR 818

[Close]
BLAST of CmoCh04G001560 vs. NCBI nr
Match: XP_022943164.1 (nuclear pore complex protein NUP88-like [Cucurbita moschata])

HSP 1 Score: 1624.0 bits (4204), Expect = 0.0e+00
Identity = 813/813 (100.00%), Postives = 813/813 (100.00%), Query Frame = 0 

Query: 202  MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 261
            MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA
Sbjct: 1    MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 262  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 321
            SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA
Sbjct: 61   SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 120

Query: 322  LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 381
            LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV
Sbjct: 121  LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 382  LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 441
            LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL
Sbjct: 181  LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 240

Query: 442  FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 501
            FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241  FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 502  LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 561
            LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK
Sbjct: 301  LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 562  LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 621
            LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL
Sbjct: 361  LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 420

Query: 622  SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 681
            SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG
Sbjct: 421  SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 682  IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 741
            IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV
Sbjct: 481  IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 742  GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 801
            GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV
Sbjct: 541  GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 802  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 861
            VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ
Sbjct: 601  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 862  QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 921
            QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF
Sbjct: 661  QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 922  KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 981
            KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL
Sbjct: 721  KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780

Query: 982  KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 1015
            KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Sbjct: 781  KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of CmoCh04G001560 vs. NCBI nr
Match: KAG6600003.1 (Nuclear pore complex protein NUP88, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030676.1 Nuclear pore complex protein NUP88 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1619.8 bits (4193), Expect = 0.0e+00
Identity = 811/813 (99.75%), Postives = 811/813 (99.75%), Query Frame = 0 

Query: 202  MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 261
            MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA
Sbjct: 1    MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 262  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 321
            SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA
Sbjct: 61   SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 120

Query: 322  LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 381
            LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV
Sbjct: 121  LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 382  LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 441
            LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL
Sbjct: 181  LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 240

Query: 442  FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 501
            FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241  FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 502  LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 561
            LVQAT GGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK
Sbjct: 301  LVQATGGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 562  LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 621
            LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL
Sbjct: 361  LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 420

Query: 622  SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 681
            SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG
Sbjct: 421  SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 682  IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 741
            IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV
Sbjct: 481  IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 742  GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 801
            GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV
Sbjct: 541  GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 802  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 861
            VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ
Sbjct: 601  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 862  QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 921
            QTRLREAQQKLLKV GKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF
Sbjct: 661  QTRLREAQQKLLKVGGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 922  KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 981
            KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL
Sbjct: 721  KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780

Query: 982  KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 1015
            KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Sbjct: 781  KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of CmoCh04G001560 vs. NCBI nr
Match: XP_022995007.1 (nuclear pore complex protein NUP88-like [Cucurbita maxima])

HSP 1 Score: 1602.4 bits (4148), Expect = 0.0e+00
Identity = 802/813 (98.65%), Postives = 807/813 (99.26%), Query Frame = 0 

Query: 202  MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 261
            MRYNLDLNEADSEPRRSLTPK DVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA
Sbjct: 1    MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 262  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 321
            SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQP+VPLDF+VHKISINKNGSAIA
Sbjct: 61   SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120

Query: 322  LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 381
            LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV
Sbjct: 121  LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 382  LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 441
            LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVF+L
Sbjct: 181  LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240

Query: 442  FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 501
            FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241  FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 502  LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 561
            LVQAT GGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK
Sbjct: 301  LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 562  LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 621
            LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICE ITGKL
Sbjct: 361  LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420

Query: 622  SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 681
            SEVKLDQPLDYTVW+GLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG
Sbjct: 421  SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 682  IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 741
            IDSIILHFLPFTSQSRGQDQTM+TPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV
Sbjct: 481  IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 742  GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 801
            GVTISQECIVLEMKTWNLQVPVQFSNFLNE KLAATATGEKNESERSEIISKNLLSGPKV
Sbjct: 541  GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 802  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 861
            VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ
Sbjct: 601  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 862  QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 921
            QTRLREAQQKLLKV GKQELLEDRIE AIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF
Sbjct: 661  QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 922  KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 981
            KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL
Sbjct: 721  KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780

Query: 982  KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 1015
            KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Sbjct: 781  KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of CmoCh04G001560 vs. NCBI nr
Match: XP_023518771.1 (nuclear pore complex protein NUP88-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1596.6 bits (4133), Expect = 0.0e+00
Identity = 801/813 (98.52%), Postives = 805/813 (99.02%), Query Frame = 0 

Query: 202  MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 261
            MRYN+DLNEADSEPRRSLTPK DVDWVPLKTHPVFTAATAVDY DSVSPPLRSLLVSDGA
Sbjct: 1    MRYNVDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYDDSVSPPLRSLLVSDGA 60

Query: 262  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 321
            SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA
Sbjct: 61   SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 120

Query: 322  LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 381
            LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIY GDHDVIRTLQVSWHPYSNFHLGV
Sbjct: 121  LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYNGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 382  LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 441
            LSSDSVFRLFNLS+DGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL
Sbjct: 181  LSSDSVFRLFNLSADGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 240

Query: 442  FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 501
            FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241  FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 502  LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 561
            LVQAT GGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK
Sbjct: 301  LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 562  LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 621
            LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICE ITGKL
Sbjct: 361  LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420

Query: 622  SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 681
            SEVKLDQPLDYTVW+GLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG
Sbjct: 421  SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 682  IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 741
            IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV
Sbjct: 481  IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 742  GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 801
            GVTISQECIVLEMKTWNLQVPVQFSNFLNE KLAATATGEKNESERSEIISKNLLSGPKV
Sbjct: 541  GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 802  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 861
            VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ
Sbjct: 601  VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 862  QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 921
            Q RLREAQQKLLKV GKQELLEDRIERAIKLHNVLEERI+RLKNLPGAHKRPLSKAEREF
Sbjct: 661  QARLREAQQKLLKVGGKQELLEDRIERAIKLHNVLEERIYRLKNLPGAHKRPLSKAEREF 720

Query: 922  KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 981
            KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL
Sbjct: 721  KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780

Query: 982  KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 1015
            KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Sbjct: 781  KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of CmoCh04G001560 vs. NCBI nr
Match: XP_038891829.1 (nuclear pore complex protein NUP88 [Benincasa hispida])

HSP 1 Score: 1426.8 bits (3692), Expect = 0.0e+00
Identity = 720/820 (87.80%), Postives = 764/820 (93.17%), Query Frame = 0 

Query: 202  MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFT------AATAVDYGDSVSPPLRSL 261
            MRYN DLNEADS+P RSLTPKRDVDWVPLKTHPVFT      +A+A +YG SV PPLR+L
Sbjct: 1    MRYNFDLNEADSDPPRSLTPKRDVDWVPLKTHPVFTPAAASASASAANYGGSVPPPLRNL 60

Query: 262  LVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINK 321
            LVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVL+PDV LDF+VHKISIN+
Sbjct: 61   LVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLRPDVQLDFLVHKISINQ 120

Query: 322  NGSAIALVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYS 381
            NGSA+ALVG GGL IMYLYGHSSTRD +TVICRTV+VGPQIY G HDVIRTLQVSWHPYS
Sbjct: 121  NGSALALVGSGGLGIMYLYGHSSTRDDNTVICRTVKVGPQIYCGGHDVIRTLQVSWHPYS 180

Query: 382  NFHLGVLSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDK 441
            NFHLGVLSSDSVFRLFNLSSD VQPEQEYYLQPVEPGQSKNA+SICPVDFSFG DHLWDK
Sbjct: 181  NFHLGVLSSDSVFRLFNLSSDIVQPEQEYYLQPVEPGQSKNATSICPVDFSFGEDHLWDK 240

Query: 442  FSVFVLFSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWL 501
            FSVFVLFSDGSIYILCPVVPFRS YKCESILEIYNDAQS+GLKSANPTAVSNS LAISWL
Sbjct: 241  FSVFVLFSDGSIYILCPVVPFRSVYKCESILEIYNDAQSYGLKSANPTAVSNSGLAISWL 300

Query: 502  EETFPNLVQATSGGDMTVIVAHPCALFDASLALQGPLRRACN-NGNEGDISIKGAECEGR 561
            EETFPNLVQAT GGD  VIVAHPCALFDASLA+QGPLRRACN +G+E D+SIKGAECEGR
Sbjct: 301  EETFPNLVQATDGGDAYVIVAHPCALFDASLAMQGPLRRACNDDGDEEDVSIKGAECEGR 360

Query: 562  AVSLLYKLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMIC 621
            AVSLLY LISKDSVLVTAWSGGQLQIDALADEIQPVWNLG PPRV VDPNDNILG AMIC
Sbjct: 361  AVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGCPPRVRVDPNDNILGLAMIC 420

Query: 622  EPITGKLSEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERI 681
            E +TGKLS+VKLDQPLD+TVW+GLPPPLLRLAIVDLALPKKME+ SLI MFVDKLMD+RI
Sbjct: 421  EVVTGKLSKVKLDQPLDHTVWLGLPPPLLRLAIVDLALPKKMEKDSLITMFVDKLMDQRI 480

Query: 682  YALHNGGIDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDS 741
            YALHNGGIDSIILHFLPFTSQS+GQ+QTM+TPSVHPVLN CQGDTSNP PLCGFASLSDS
Sbjct: 481  YALHNGGIDSIILHFLPFTSQSKGQNQTMRTPSVHPVLNACQGDTSNPSPLCGFASLSDS 540

Query: 742  FGYSWIVGVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKN 801
             GYSWI+GVT+SQECIVLEMKTWNL VPVQ SNFL+E K AA  TGEKNESERSEIISK+
Sbjct: 541  LGYSWILGVTLSQECIVLEMKTWNLLVPVQVSNFLDEGKSAAAGTGEKNESERSEIISKD 600

Query: 802  LLSGPKVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPEL 861
            LL GPKVVLLPQSSS MRSVTADSIEGRSMLHQYFKLFHENYVEYAH VYYELKQH P+L
Sbjct: 601  LLGGPKVVLLPQSSSTMRSVTADSIEGRSMLHQYFKLFHENYVEYAHAVYYELKQHEPKL 660

Query: 862  KRLIDDQQTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPL 921
            KRLIDDQQTRL+EAQQKL+KV GKQ+LL+DRIERAIKLHNVLEERIH+LKNLPGAHK+PL
Sbjct: 661  KRLIDDQQTRLKEAQQKLIKVEGKQQLLDDRIERAIKLHNVLEERIHQLKNLPGAHKKPL 720

Query: 922  SKAEREFKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQ 981
            SKAEREFKSTLDHFT +E+DALHTSIDTLTARLRR+TN SKNNNLVNQQ K++RRNT +Q
Sbjct: 721  SKAEREFKSTLDHFTDIELDALHTSIDTLTARLRRFTN-SKNNNLVNQQQKMYRRNTYIQ 780

Query: 982  GSQISQLKSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 1015
             SQISQLKSSLEKLSLLNAEN KKVKLVESTI+SKE   C
Sbjct: 781  SSQISQLKSSLEKLSLLNAENTKKVKLVESTIQSKERKIC 819

[Close]
BLAST of CmoCh04G001560 vs. TAIR 10
Match: AT5G05680.1 (nuclear pore complex protein-related )

HSP 1 Score: 897.9 bits (2319), Expect = 7.5e-261
Identity = 461/814 (56.63%), Postives = 599/814 (73.59%), Query Frame = 0 

Query: 202  MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPL-RSLLVSDG 261
            M++N +  E   + RRS TPK  V WVPL++HPVF +  +     +VS    R+ +  DG
Sbjct: 1    MKFNFNETEDAPDSRRSPTPKEPVRWVPLQSHPVFASLPSSQDEPAVSQLFPRNFMAWDG 60

Query: 262  ASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAI 321
             SR+Y+WDS +  LHR+S+RLGEPEP+SVLAA PSKV+QPD+ + F V KISINK+GSA+
Sbjct: 61   DSRVYYWDSRRYLLHRLSLRLGEPEPSSVLAAVPSKVMQPDLQVTFSVSKISINKSGSAV 120

Query: 322  ALVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLG 381
             L G  G+ +MYL+G +S  + + VICR V +G +IY      I  LQ SWHP S+ HLG
Sbjct: 121  LLAGSDGICVMYLFGRASVIEDN-VICRVVSIGSEIYTSSDSAITLLQASWHPDSDTHLG 180

Query: 382  VLSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFV 441
            +LSSD+VFRLF+LSSD   PEQEYYLQP EPG+S+ ASSI P DFSFGGDHLWD+F+VF+
Sbjct: 181  ILSSDAVFRLFDLSSDTELPEQEYYLQPGEPGRSRTASSIYPADFSFGGDHLWDRFTVFI 240

Query: 442  LFSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFP 501
            LF+DGSIYILCPVVPF S YK ES++EIYNDA  +G+KS+N  AVSNSSLAI WLE TFP
Sbjct: 241  LFTDGSIYILCPVVPFGSVYKWESVMEIYNDANMYGVKSSNSLAVSNSSLAIEWLEATFP 300

Query: 502  NLV-QATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLL 561
            +L  Q T G ++ V+ A P AL DASLALQGPL +A +   + D +++ AEC+GRAVSLL
Sbjct: 301  DLTEQGTRGENILVVKAQPYALLDASLALQGPLYKASSGDGDEDFAVREAECKGRAVSLL 360

Query: 562  YKLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITG 621
            Y L+SKDS+LVTAWS GQLQ+DAL DEIQPVW  G+  R+ ++ ++ I G AMICE    
Sbjct: 361  YNLVSKDSILVTAWSAGQLQVDALVDEIQPVWISGNSSRLRMNSHNKIQGVAMICESNIS 420

Query: 622  KLSEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHN 681
            +L     + PLD+TVW+G PPPLLRLA+VDLALPK  E  SL+ +F D L+ ERIY+LH+
Sbjct: 421  ELPVATSNLPLDHTVWLGHPPPLLRLAMVDLALPKMREGGSLVTLFADSLLPERIYSLHD 480

Query: 682  GGIDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSW 741
            GGIDS +LH LPFTSQ+ G+D+ +KTPSVH VL+TCQ + S   PL GF  LSDSFGYSW
Sbjct: 481  GGIDSTVLHSLPFTSQASGKDEALKTPSVHTVLSTCQ-EESAVSPLLGFVPLSDSFGYSW 540

Query: 742  IVGVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGP 801
            IV V  S ECIV EMKTW+L +P+  S     +K  +++  EK E E S IISK LL+GP
Sbjct: 541  IVAVLSSGECIVAEMKTWDLLLPIHVST----DKTVSSSAIEKKEQENSCIISKELLAGP 600

Query: 802  KVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLID 861
            K+ + P +  N RS  A+S+EGRS+L  Y KLFHENY+EYAH V++EL+ H P LKR+ID
Sbjct: 601  KIRIAPHALPNQRSTPANSVEGRSILLDYVKLFHENYIEYAHKVHFELQHHAPNLKRIID 660

Query: 862  DQQTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAER 921
            DQ  RL EA +K+ KV   Q  LE RI++AI+ H+ LE+ + RL++LPG HK+PL++AE 
Sbjct: 661  DQHQRLAEANEKISKVEKNQSFLEKRIDKAIERHDSLEQCLQRLRSLPGTHKKPLTRAEL 720

Query: 922  EFKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLV-NQQHKIHRRNTCVQGSQI 981
            +FKS LD + GVEVDAL +SI+TL AR+++ T  S    +V   Q K + +   +Q +Q+
Sbjct: 721  DFKSELDQYAGVEVDALQSSIETLRARVKKSTQKSHKGTVVAASQKKQYSKKNLIQDTQM 780

Query: 982  SQLKSSLEKLSLLNAENAKKVKLVESTIKSKEAN 1013
            SQL+S+L KLSL+N++N+KKVK+VES +KS+E++
Sbjct: 781  SQLQSTLAKLSLMNSDNSKKVKIVESALKSQESS 808

[Close]
BLAST of CmoCh04G001560 vs. TAIR 10
Match: AT2G40095.1 (Alpha/beta hydrolase related protein )

HSP 1 Score: 232.6 bits (592), Expect = 1.4e-60
Identity = 126/197 (63.96%), Postives = 148/197 (75.13%), Query Frame = 0 

Query: 1   MGFLKEEKSK------RLWRGIKTLFVLITMLISLLLFSAPVLLVIADALLSASLYPYSF 60
           MGF KEE SK       LWRGIKT+FVL TM  S LL SAP+ L +ADALL ++L     
Sbjct: 1   MGFSKEEISKTRKLWSSLWRGIKTIFVLFTMFFSFLLVSAPIFLAVADALLPSALLHRFS 60

Query: 61  SLNSLPSHLKNYDFRSSLIDIPLISFARSAIIICVYSFCDGPRLSRGPYLGITTLCSVIS 120
           S  +L SHL NYDFR SLIDIPLIS  RSA+I+CVY  CDGP+LSRGPYL IT +CS+ S
Sbjct: 61  SPATLSSHLTNYDFRHSLIDIPLISIIRSAVILCVYGLCDGPKLSRGPYLTITMICSISS 120

Query: 121 LVYVSLKASFVFDGDLSDVRRGGGYARGMEVALFMCSLALAVGHVAVAYRTSCRERRKLL 180
           L+YVSLKA+FVF G+ +    GG Y R  EVALF+CS  LA+GH+ VAYRTSCRER+KLL
Sbjct: 121 LIYVSLKAAFVF-GEPAIGDGGGNYFRAAEVALFLCSSVLAIGHIVVAYRTSCRERKKLL 180

Query: 181 VYKIDIEAVSACNSGFP 192
           V+KIDIEAVSAC + +P
Sbjct: 181 VFKIDIEAVSACKNVYP 196

[Close]
BLAST of CmoCh04G001560 vs. TAIR 10
Match: AT3G55880.2 (Alpha/beta hydrolase related protein )

HSP 1 Score: 214.9 bits (546), Expect = 2.9e-55
Identity = 122/208 (58.65%), Postives = 147/208 (70.67%), Query Frame = 0 

Query: 1   MGFLKEEK-------SKRLWRGIKTLFVLITMLISLLLFSAPVLLVIADALL-SASLYPY 60
           MG + +E+       S  LWRGIKT+FVL TM +S ++FSAP+ L +ADA+L SA L   
Sbjct: 1   MGLISKEEISKTRRYSSSLWRGIKTIFVLFTMFLSFIIFSAPIFLAVADAVLPSAILSSS 60

Query: 61  SFSLNSLP---------SHLKNYDFRSSLIDIPLISFARSAIIICVYSFCDGPRLSRGPY 120
           S SLN L          S+L NYDFR SLIDIPLIS  RSAII+CVY  CDGP+LSRGPY
Sbjct: 61  SPSLNRLSPSSFPATIYSYLSNYDFRYSLIDIPLISIIRSAIILCVYGLCDGPKLSRGPY 120

Query: 121 LGITTLCSVISLVYVSLKASFVFDGDLSDVRRGGGYARGMEVALFMCSLALAVGHVAVAY 180
           L IT +CS+ SL+YVS KA+ VF   +      GGY R  E+ALF+CS  LA+GH+ VAY
Sbjct: 121 LTITMICSISSLIYVSFKAAIVFGEPVI-----GGYFRTEEMALFLCSWILAIGHIVVAY 180

Query: 181 RTSCRERRKLLVYKIDIEAVSACNSGFP 192
           RTSCRERRKLLV+KIDIE+VSAC + FP
Sbjct: 181 RTSCRERRKLLVFKIDIESVSACKNVFP 203

[Close]
BLAST of CmoCh04G001560 vs. TAIR 10
Match: AT3G55880.1 (Alpha/beta hydrolase related protein )

HSP 1 Score: 205.7 bits (522), Expect = 1.8e-52
Identity = 118/202 (58.42%), Postives = 143/202 (70.79%), Query Frame = 0 

Query: 1   MGFLKEEK-------SKRLWRGIKTLFVLITMLISLLLFSAPVLLVIADALL-SASLYPY 60
           MG + +E+       S  LWRGIKT+FVL TM +S ++FSAP+ L +ADA+L SA L   
Sbjct: 1   MGLISKEEISKTRRYSSSLWRGIKTIFVLFTMFLSFIIFSAPIFLAVADAVLPSAILSSS 60

Query: 61  SFSLNSLP---------SHLKNYDFRSSLIDIPLISFARSAIIICVYSFCDGPRLSRGPY 120
           S SLN L          S+L NYDFR SLIDIPLIS  RSAII+CVY  CDGP+LSRGPY
Sbjct: 61  SPSLNRLSPSSFPATIYSYLSNYDFRYSLIDIPLISIIRSAIILCVYGLCDGPKLSRGPY 120

Query: 121 LGITTLCSVISLVYVSLKASFVFDGDLSDVRRGGGYARGMEVALFMCSLALAVGHVAVAY 180
           L IT +CS+ SL+YVS KA+ VF   +      GGY R  E+ALF+CS  LA+GH+ VAY
Sbjct: 121 LTITMICSISSLIYVSFKAAIVFGEPVI-----GGYFRTEEMALFLCSWILAIGHIVVAY 180

Query: 181 RTSCRERRKLLVYKIDIEAVSA 186
           RTSCRERRKLLV+KIDIE+VS+
Sbjct: 181 RTSCRERRKLLVFKIDIESVSS 197

[Close]
BLAST of CmoCh04G001560 vs. TAIR 10
Match: AT1G80280.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 3.4e-35
Identity = 93/230 (40.43%), Postives = 134/230 (58.26%), Query Frame = 0 

Query: 2   GFLKEEKSKRLWRGIKTLFVLITMLISLLLFSAPVLLVIADALLSASLYPYSFSLN--SL 61
           G+   EK++R    ++T+F ++ ML+SLL+ S PVL+ I D L+   L      L     
Sbjct: 4   GWFMVEKARRC---LRTVFFMVAMLVSLLVSSLPVLVAIGDVLVPTFLLSSFTCLTCYGF 63

Query: 62  PSHLKNYDFRSSLIDIPLISFARSAIIICVYSFCDGPRLSRGPYLGITTLCSVISLVYVS 121
             HL  Y F+SSL DIPL+S  RS ++ICVYS  D P LS GPYLG  +LCSV+S+V +S
Sbjct: 64  KEHLSRYAFKSSLTDIPLVSLVRSFLVICVYSLSDAPALSHGPYLGTVSLCSVVSVVLLS 123

Query: 122 LKAS-FVFDGDLSDVRRGGGYARGMEV-------ALFMCSLALAVGHVAVAYRTSCRERR 181
           +KA  F  +  L+D        + + +        LF+ S+  A+GH+ VAYRTSCR RR
Sbjct: 124 VKACVFTANSQLNDQASSSPSRQRLHLKKSWGMPVLFLSSVVFALGHMVVAYRTSCRARR 183

Query: 182 KLLVYKIDIEAVSACNSGFPSLRVQIFRTTMRYNLDLNEADSEPRRSLTP 222
           KLL +++D EAV +C S F   + ++ R+ +      ++ D E RR L P
Sbjct: 184 KLLYHRVDPEAVLSCKSVFSGYQ-KVPRSPIPLVGKASKVDGEARRKLHP 229

The following BLAST results are available for this feature:
BLAST of CmoCh04G001560 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FFK61.1e-25956.63Nuclear pore complex protein NUP88 OS=Arabidopsis thaliana OX=3702 GN=NUP88 PE=1... [more]
BLAST of CmoCh04G001560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FTH00.0e+00100.00nuclear pore complex protein NUP88-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A6J1JXJ00.0e+0098.65nuclear pore complex protein NUP88-like OS=Cucurbita maxima OX=3661 GN=LOC111490... [more]
A0A5A7UW690.0e+0087.44Nuclear pore complex protein NUP88 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A1S3CIR90.0e+0087.44nuclear pore complex protein NUP88 OS=Cucumis melo OX=3656 GN=LOC103501436 PE=4 ... [more]
A0A0A0KLW80.0e+0087.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G202340 PE=4 SV=1[more]
BLAST of CmoCh04G001560 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022943164.10.0e+00100.00nuclear pore complex protein NUP88-like [Cucurbita moschata][more]
KAG6600003.10.0e+0099.75Nuclear pore complex protein NUP88, partial [Cucurbita argyrosperma subsp. soror... [more]
XP_022995007.10.0e+0098.65nuclear pore complex protein NUP88-like [Cucurbita maxima][more]
XP_023518771.10.0e+0098.52nuclear pore complex protein NUP88-like [Cucurbita pepo subsp. pepo][more]
XP_038891829.10.0e+0087.80nuclear pore complex protein NUP88 [Benincasa hispida][more]
BLAST of CmoCh04G001560 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G05680.17.5e-26156.63nuclear pore complex protein-related [more]
AT2G40095.11.4e-6063.96Alpha/beta hydrolase related protein [more]
AT3G55880.22.9e-5558.65Alpha/beta hydrolase related protein [more]
AT3G55880.11.8e-5258.42Alpha/beta hydrolase related protein [more]
AT1G80280.13.4e-3540.43alpha/beta-Hydrolases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 858..906
IPR019321Nucleoporin Nup88PFAMPF10168Nup88coord: 658..1004
e-value: 1.0E-8
score: 33.5
coord: 231..428
e-value: 1.3E-16
score: 59.6
IPR037700Nucleoporin NUP88/NUP82PANTHERPTHR13257NUCLEOPORIN NUP84-RELATEDcoord: 217..1011
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 228..450

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G001560.1CmoCh04G001560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045087 innate immune response
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0006611 protein export from nucleus
biological_process GO:0006606 protein import into nucleus
biological_process GO:0000055 ribosomal large subunit export from nucleus
biological_process GO:0000056 ribosomal small subunit export from nucleus
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0006913 nucleocytoplasmic transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005643 nuclear pore
molecular_function GO:0005515 protein binding
molecular_function GO:0017056 structural constituent of nuclear pore