CmoCh03G014030 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh03G014030
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr03: 10226688 .. 10227016 (+)
RNA-Seq ExpressionCmoCh03G014030
SyntenyCmoCh03G014030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTTATGTTTGAAGGTTACTAGATGTAAATCTTCCATTTCAGTTCATCCTCTGTAGATCTCCCTAGGTTCAGTTCTGGAGAGGGTACCTCTTCTCACATTCAAGTTCTTGAGTTTTTTTCCCCATTAAATGCTTGTCAGGATGAAATGGGAGGACCTACAGCTGGTTCATATCTAGGGTTCCTAGAGCTTTTGTTTCTTAATCTATTCTTCTGTGGATTCTTAGAACGTATAGGATCTTTCCTTTCGTACTTGTATATCTGGCCATATCTTTTATCAGCTGGGATTTCATCTCATTTCCAATGCTGTCGTACTCACATTATATGA

mRNA sequence

ATGACCTTATGTTTGAAGGATGAAATGGGAGGACCTACAGCTGGTTCATATCTAGGGTTCCTAGAGCTTTTGTTTCTTAATCTATTCTTCTGTGGATTCTTAGAACGTATAGGATCTTTCCTTTCGTACTTGTATATCTGGCCATATCTTTTATCAGCTGGGATTTCATCTCATTTCCAATGCTGTCGTACTCACATTATATGA

Coding sequence (CDS)

ATGACCTTATGTTTGAAGGATGAAATGGGAGGACCTACAGCTGGTTCATATCTAGGGTTCCTAGAGCTTTTGTTTCTTAATCTATTCTTCTGTGGATTCTTAGAACGTATAGGATCTTTCCTTTCGTACTTGTATATCTGGCCATATCTTTTATCAGCTGGGATTTCATCTCATTTCCAATGCTGTCGTACTCACATTATATGA

Protein sequence

MTLCLKDEMGGPTAGSYLGFLELLFLNLFFCGFLERIGSFLSYLYIWPYLLSAGISSHFQCCRTHII
Homology
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BLAST of CmoCh03G014030 vs. NCBI nr
Match: KAG7034730.1 (hypothetical protein SDJN02_04460, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143.3 bits (360), Expect = 7.7e-31
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MTLCLKDEMGGPTAGSYLGFLELLFLNLFFCGFLERIGSFLSYLYIWPYLLSAGISSHFQ 60
          MTLCLKDEMGGPTAGSYLGFLELLFLNLFFCGFLERIGSFLSYLYIWPYLLSAGISSHFQ
Sbjct: 1  MTLCLKDEMGGPTAGSYLGFLELLFLNLFFCGFLERIGSFLSYLYIWPYLLSAGISSHFQ 60

Query: 61 CCRTHII 68
          CCRTHII
Sbjct: 61 CCRTHII 67

The following BLAST results are available for this feature:
BLAST of CmoCh03G014030 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh03G014030 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh03G014030 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7034730.17.7e-31100.00hypothetical protein SDJN02_04460, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmoCh03G014030 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G014030.1CmoCh03G014030.1mRNA