CmoCh03G013780 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATGCAATCGATAGGAAGAAGACGAAGAAGAGGAGAGCATTCAGCATCCAGAGGCTAAGAGATTCGTGGAAGTGGAAATTCCTTAAGGATTTCAAGTGGAAGAGATTGAATCTCCACATCGGTTTCTTAGATGCTATAATCTTTCGAATCGCTTCTCTGTTTGAGGCCATTGCGTTGATAGGCATCGCCGGCTTCTTCTTCCTCTGTTGTGGCGGTTGCCGCTTCTGATCGATTCTGCCAACTCAATCGGTCAATTTCTATGTTCTTCATCATAACTTCGTAATTAACCGAACTCTGTATGTATTTGTTATATAAGTTTCCTTCCTCTTCAGTTTTTCTTTTCCAGTCGTTCTTAATTTGTTCATTAATTTGTTGTCTCTGGCCAAGCACTGCAACACAAAATGTAGATCGGCTTTCGAATCTCTCTTCTCTATTTGAATCGTTTTCTCTGTGGCTTCGATCTGACGAACTCGTTAATCTAGCAAATTCAATTCATTATAAAATTATATTGAAGAAGTTTGTTGGTATGGTAGATTGGCGAAGGGTAAAACTAAGAAGAATTCATCTGCAAACAAAGGTGCGGACGAATTTAGATTTTGCTTGGAGAATCAATATCATTTTCATGCGAGTGGAGAAATGAATAACTTAGGTCAGAATCTTACTGGAAACAAACTGGCCATCGACGGCTAAGAAGGAAGAGTGACAATCGTGGAAGGATTGAATAATCCTCTTCCAACTGTCTTGAATTATTCCAACATTAGAGCCTTTCACGTTTGTATCTTCTCTGGCAACATTCACTTCTCTTAATTAATTAACGAATTGAAGAAGGATCGATTTATTCAAAGTCATAACTCGTATTTGGTTTAAATTAATGCTCCAAATTTCATTCCTTAAAGTTTGACCAGCACTAAAGAATAGCTTGCATTATAAGTTCATCGCAATTTGCAATATAATTTTTAATTTCCAAGTACTAACCATTTCTCTATGCCTCCAATTTGTTAAATCAAATACTCAAAAATTGGGGAGAATCCCGCGAAAGCTTAAGTTGGTAATTGGCTAAGATCTATTCTCACGTGAGAAGTGCACTAAGCAATTAGGTAGCAATTAGGTAGTGCTTTCATTTTGTTGCTTTAATGAAATTGGATTCCTCCTAGCTGCCAATTCGCAGACTCGTTTCGTTGTCATAGTTCTAGGCTCATTAGACCCTCTTTTTTATGCCAAGATCGTGAGAATGGACACAAGACCGCTAGAAATAGTTAAGAAATTGAACACCTAAGTCAGGCCCTCTCCTGTTATTTATGGACGTTAGCTCACATTTTAAAAATGCATATGTTGGGGGAGAAGTTTCTACACCCTTGTAAAAATGATTAGTTCTCATCTCCAATTGATTTGAGATGTCACAATCCACCTTCCTTGGTATCTCACAAATACACTAAATTAGATCACCAACTCTCCAAAATAGAATTTCGAATCTTCACTCCTTGAATCTACATTTGAATGATTATAGCCTTTTCAATCAATTAAAACCACATTTCACCTGTAACCTCTCAATCATTTTCCTATTGAATTAGTCCGTTAAAAAAAAAAAAAATTGAACTTCAAAATAATGTTTTGTAAAGAAAGTTCAGGTAAATCTAATTTAACCGTGACAATAAAATACTGTGCATTTTTCGAACTTCGATACATAAATATCTTCTTTTTTGGGAGCAGGTTGAGCAGTAG ATGGATGATGCAATCGATAGGAAGAAGACGAAGAAGAGGAGAGCATTCAGCATCCAGAGGCTAAGAGATTCGTGGAAGTGGAAATTCCTTAAGGATTTCAAGTGGAAGAGATTGAATCTCCACATCGGTTTCTTAGATGCTATAATCTTTCGAATCGCTTCTCTGTTTGAGGCCATTGCGTTGATAGGCATCGCCGGCTTCTTCTTCCTCTGTTGTGGCGTTTTTCTTTTCCAGTCGTTCTTAATTTGTTCATTAATTTGTTGTCTCTGGCCAAGCACTGCAACACAAAATGTAGATCGGCTTTCGAATCTCTCTTCTCTATTTGAATCGTTTTCTCTGTGGCTTCGATCTGACGAACTCGTTAATCTAGCAAATTCAATTCATTATAAAATTATATTGAAGAAGTTTGTTGGTATGGTAGATTGGCGAAGGGTTGAGCAGTAG ATGGATGATGCAATCGATAGGAAGAAGACGAAGAAGAGGAGAGCATTCAGCATCCAGAGGCTAAGAGATTCGTGGAAGTGGAAATTCCTTAAGGATTTCAAGTGGAAGAGATTGAATCTCCACATCGGTTTCTTAGATGCTATAATCTTTCGAATCGCTTCTCTGTTTGAGGCCATTGCGTTGATAGGCATCGCCGGCTTCTTCTTCCTCTGTTGTGGCGTTTTTCTTTTCCAGTCGTTCTTAATTTGTTCATTAATTTGTTGTCTCTGGCCAAGCACTGCAACACAAAATGTAGATCGGCTTTCGAATCTCTCTTCTCTATTTGAATCGTTTTCTCTGTGGCTTCGATCTGACGAACTCGTTAATCTAGCAAATTCAATTCATTATAAAATTATATTGAAGAAGTTTGTTGGTATGGTAGATTGGCGAAGGGTTGAGCAGTAG MDDAIDRKKTKKRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEAIALIGIAGFFFLCCGVFLFQSFLICSLICCLWPSTATQNVDRLSNLSSLFESFSLWLRSDELVNLANSIHYKIILKKFVGMVDWRRVEQ Homology
BLAST of CmoCh03G013780 vs. ExPASy TrEMBL
Match: A0A0A0KLX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G522750 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24 Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = 0
BLAST of CmoCh03G013780 vs. ExPASy TrEMBL
Match: A0A6P9EL64 (uncharacterized protein LOC108990492 OS=Juglans regia OX=51240 GN=LOC108990492 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 3.3e-08 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of CmoCh03G013780 vs. ExPASy TrEMBL
Match: A0A7N2LSF8 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 4.4e-08 Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 0
BLAST of CmoCh03G013780 vs. ExPASy TrEMBL
Match: A0A1R3FVP9 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_38300 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 5.7e-08 Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of CmoCh03G013780 vs. ExPASy TrEMBL
Match: A0A6J1B6L1 (uncharacterized protein LOC110424571 OS=Herrania umbratica OX=108875 GN=LOC110424571 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.2e-07 Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 0
BLAST of CmoCh03G013780 vs. NCBI nr
Match: KAG7034699.1 (hypothetical protein SDJN02_04429, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145.2 bits (365), Expect = 4.4e-31 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of CmoCh03G013780 vs. NCBI nr
Match: KAG6581417.1 (hypothetical protein SDJN03_21419, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 134.0 bits (336), Expect = 1.0e-27 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of CmoCh03G013780 vs. NCBI nr
Match: KGN49382.1 (hypothetical protein Csa_004198 [Cucumis sativus]) HSP 1 Score: 122.1 bits (305), Expect = 4.0e-24 Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = 0
BLAST of CmoCh03G013780 vs. NCBI nr
Match: XP_023929751.1 (uncharacterized protein LOC112041078 [Quercus suber]) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-08 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of CmoCh03G013780 vs. NCBI nr
Match: XP_035544743.1 (uncharacterized protein LOC108990492 [Juglans regia]) HSP 1 Score: 68.2 bits (165), Expect = 6.9e-08 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of CmoCh03G013780 vs. TAIR 10
Match: AT5G46295.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 9.0e-06 Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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