CmoCh03G013540 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G013540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	S-protein homolog
Location	Cmo_Chr03: 10009478 .. 10010911 (+)
RNA-Seq Expression	CmoCh03G013540
Synteny	CmoCh03G013540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCGCTTAGTCGATGGAAGGTCGTGATTTTTAATCAATTGAATCCCGGACAAACTTTATTAGCTCACTGTAAATCAAAGGAGGATGATTTGGGTGATCATTTACTCCAAGTGGGTGAACAATACTCGTGGGAATTCAAAGAGAATGTCATCTCAACGACTCGTTTTTGGTGTACTTTCACAACGTCATTAAATAAACGTATCGTCATGGACGTGTTTTGGCCAGAGACTCATCCTTGGCTTGCTTATAGATGCAACGACTACTCTTGTGTTTGGGTTGCTCAAGATGATGGCATGTATTTGACCAACATTCCCGAGGGTAAAAGAGAGCTTGTGCGTAAATGGGATACCTAGACGAATGTGGACGGGAAATATTGTCATATTTAATTTCATGTACTCATCCCGTCTTATTATTAATAAAACTTAAGCAAAACAGGGAAAGACCAAATAATTCATTTAACGTTAATATAAAGTAAATAAAATATTAAATATTTATTTATTTATTTATTTATATATATATATGACCGAGGCAAAAAATTGGAGCGAAAACCCGGCATCTGTTAAGACAGGACAATGGGAATGGAAGGATAGTCTTCCCATAAACCCTAGACTTATCGCCTTCCCTCTCCCTCGTTTGCGCGGTTGTTTTCTTCGAGGGGGCTCTTCGCCCTCTCTCTTCGAATTATTTGTCTCCGTTTCACGTCGTTCATCTGTTCTATCTCTAGGCTTCCGAAGCTCTCCAGTCGATCTGTGTAAGTTCTTTCTTTCTTTCTAACTTATTATTATCATCTCCGCCGTTGGGAGTGGGCTGGGGGTTCACTGAGATTCGAGGTGCTCTAGATTTTGATGCTGTCTTCTATTGATTTCACTCGACTCGATTTGACCAAACTTATAGATTTCGTCTGTTCTTCGTTTGATTTTGCCTATTCTGTTTCATTATTTCTTATCGCTTATAGATTTGAGGTCATGAGACCGATGTTTGATTATACCCTAATAACTTTTGCTTGAATTTGTTTGATTCTTTTTGATCTTTTATCTCTTGTTATTTTCATTTCGAGATTTTTCAACTTTCTTGTTGACAGCTTCTCCGAGAAACATCTGTGGATTCCGACTTTTTCTTGAAGTCGATAGTTTCAGCCCGTTCCATTCTTAGTAGATACTCTTTTTTGTTGAGCACGAAATTTCTTGTCTCTTTGTGTAAGTGCTTATGTTTCCACCGAACATTATAGATTTTCTGGAACGCGGTTTTTTATGCGGACATGTTCTATTATTATTTGTTGATACGTTATGGCGGCCCTTTCGTTTGGTCCCATGTTGGTGGGTTTATGAGATACTATAATATCACGTTGTTTTTTGGTTAGTCATTTAGTAGGTTTCGTGTCTCTTTTAAGACTGAACTTTATTTTCTATTCAGGCTCTCTGGAGGTTTAA

mRNA sequence

ATGCCGCCGCTTAGTCGATGGAAGGTCGTGATTTTTAATCAATTGAATCCCGGACAAACTTTATTAGCTCACTGTAAATCAAAGGAGGATGATTTGGGTGATCATTTACTCCAAGTGGGTGAACAATACTCGTGGGAATTCAAAGAGAATGTCATCTCAACGACTCGTTTTTGGTGTACTTTCACAACGTCATTAAATAAACGTATCGTCATGGACGTGTTTTGGCCAGAGACTCATCCTTGGCTTGCTTATAGATGCAACGACTACTCTTGTGTTTGGGTTGCTCAAGATGATGGCATGTATTTGACCAACATTCCCGAGGGACAATGGGAATGGAAGGATAGTCTTCCCATAAACCCTAGACTTATCGCCTTCCCTCTCCCTCGTTTGCGCGGTTGTTTTCTTCGAGGGGGCTCTTCGCCCTCTCTCTTCGAATTATTTGTCTCCGTTTCACGTCGTTCATCTGTTCTATCTCTAGGCTTCCGAAGCTCTCCAGTCGATCTGTGCTCTCTGGAGGTTTAA

Coding sequence (CDS)

ATGCCGCCGCTTAGTCGATGGAAGGTCGTGATTTTTAATCAATTGAATCCCGGACAAACTTTATTAGCTCACTGTAAATCAAAGGAGGATGATTTGGGTGATCATTTACTCCAAGTGGGTGAACAATACTCGTGGGAATTCAAAGAGAATGTCATCTCAACGACTCGTTTTTGGTGTACTTTCACAACGTCATTAAATAAACGTATCGTCATGGACGTGTTTTGGCCAGAGACTCATCCTTGGCTTGCTTATAGATGCAACGACTACTCTTGTGTTTGGGTTGCTCAAGATGATGGCATGTATTTGACCAACATTCCCGAGGGACAATGGGAATGGAAGGATAGTCTTCCCATAAACCCTAGACTTATCGCCTTCCCTCTCCCTCGTTTGCGCGGTTGTTTTCTTCGAGGGGGCTCTTCGCCCTCTCTCTTCGAATTATTTGTCTCCGTTTCACGTCGTTCATCTGTTCTATCTCTAGGCTTCCGAAGCTCTCCAGTCGATCTGTGCTCTCTGGAGGTTTAA

Protein sequence

MPPLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCTFTTSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQWEWKDSLPINPRLIAFPLPRLRGCFLRGGSSPSLFELFVSVSRRSSVLSLGFRSSPVDLCSLEV

Homology

[Close]

BLAST of CmoCh03G013540 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.9e-21
Identity = 45/109 (41.28%), Postives = 68/109 (62.39%), Query Frame = 0


Query: 1   MPPLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCT 60
           +P +S W+V + N L  G+TL  HCKSKEDDLG+  L+   ++SW F EN++ +T FWC 
Sbjct: 35  VPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWC- 94

Query: 61  FTTSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQ 110
           +    N  + ++VFW +    L +RC   +C+W A+ DG+YL N   G+
Sbjct: 95  YMNKDNGHMNVNVFWDDV--ILFHRCGWKNCIWTAKTDGLYLWNSASGE 140

[Close]

BLAST of CmoCh03G013540 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.9e-20
Identity = 45/109 (41.28%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 1   MPPLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCT 60
           +P +S W+V + N L  G+TL  HCKSKE+DLGD  L+  +++SW F EN++ +T FWC 
Sbjct: 35  VPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWC- 94

Query: 61  FTTSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQ 110
           + +  +  + + VFW +    L +RC+  +CVW A++DG+YL N   G+
Sbjct: 95  YMSKDDGHMNVKVFWDDV--ILFHRCDWKNCVWTAKNDGLYLWNSAIGE 140

[Close]

BLAST of CmoCh03G013540 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.1e-10
Identity = 39/118 (33.05%), Postives = 56/118 (47.46%), Query Frame = 0


Query: 3   PLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCTFT 62
           P S+  V I N L    TLL HCKSK+DDLG+  LQ GE +S+ F       T ++C+F+
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 63  TSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQWE----WKDSL 117
              N+    D++          +C    CVW  + +G    N    Q++    W  SL
Sbjct: 104 WP-NESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPWNKSL 160

[Close]

BLAST of CmoCh03G013540 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 3.1e-10
Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 3   PLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCTFT 62
           PL+R  VVI+N  +    L  HCKS++DD G H+LQ G  Y W F  N +++T ++C F+
Sbjct: 30  PLTR--VVIYN--DNDYLLGVHCKSRDDDHGFHILQKGGLYGWMFYVNFMNSTLYFCGFS 89

Query: 63  TSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMY 102
               K+ V D++        + RC   +C W A++DG+Y
Sbjct: 90  QEQVKKGVFDIYKAVRD---SSRCR--NCTWEAKEDGIY 119

[Close]

BLAST of CmoCh03G013540 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.3e-10
Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 0


Query: 24  HCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCTFTTSLNKRIVMDVFWPETHPWLA 83
           HCKSK+DDLG H+ + GE Y W+F  N  ++T ++C F+   + + V D+   E      
Sbjct: 62  HCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDRAERD---F 121

Query: 84  YRCNDYSCVWVAQDDGMY-LTNIPE 108
           YRC   +C W A+ D +Y  +N+P+
Sbjct: 122 YRCR--NCTWNAKKDSLYGYSNLPQ 141

[Close]

BLAST of CmoCh03G013540 vs. ExPASy TrEMBL
Match: A0A5A7UB41 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008560 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.6e-41
Identity = 70/105 (66.67%), Postives = 89/105 (84.76%), Query Frame = 0


Query: 1   MPPLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCT 60
           MPP S WKVV+FNQL+PGQ+L  HCKSK++DLG+H L+VGE++SW+FKEN+ STTRFWC+
Sbjct: 33  MPPFSSWKVVVFNQLSPGQSLTVHCKSKDNDLGEHSLRVGEKFSWKFKENLFSTTRFWCS 92

Query: 61  FTTSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTNI 106
            T+S  K + MDVFWPE H WLAYRCN  +C+WVAQDDG+Y+ N+
Sbjct: 93  LTSSSKKTVTMDVFWPERHDWLAYRCNYATCIWVAQDDGIYIVNV 137

[Close]

BLAST of CmoCh03G013540 vs. ExPASy TrEMBL
Match: A0A6J1L199 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498184 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 8.4e-27
Identity = 58/111 (52.25%), Postives = 70/111 (63.06%), Query Frame = 0


Query: 3   PLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCTFT 62
           PL RW V + N L  GQTLLAHCKSK DDLGDH L  G  +S+ FK+NV  TT FWCT T
Sbjct: 30  PLERWTVQVVNGLGGGQTLLAHCKSKNDDLGDHNLATGALFSFTFKDNVWQTTEFWCTLT 89

Query: 63  TSLNKRIVMDVFWPET--HPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQWE 112
              N     DV+W +T    WL  RC D++CVW+ +DDG+Y+ N    Q E
Sbjct: 90  KPNNAHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDE 140

[Close]

BLAST of CmoCh03G013540 vs. ExPASy TrEMBL
Match: A0A251N118 (S-protein homolog OS=Prunus persica OX=3760 GN=PRUPE_8G208300 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25
Identity = 53/109 (48.62%), Postives = 72/109 (66.06%), Query Frame = 0


Query: 5   SRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCTFTTS 64
           ++W V + N L  G+TL AHCKSK+DDLG+  L  G +++W FKEN   TT +WC  +T 
Sbjct: 32  NKWHVHVVNNLGAGKTLFAHCKSKDDDLGERNLAPGTEFNWSFKENFFGTTLYWCYMSTD 91

Query: 65  LNKRIVMDVFWPE-THPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQWEW 113
             K   +DVFW E  H WL YRCN   C+W+A+DDG+Y+  IPE + E+
Sbjct: 92  -QKHAALDVFWVEGDHSWLQYRCNWKDCIWIAKDDGIYIKIIPENRDEF 139

[Close]

BLAST of CmoCh03G013540 vs. ExPASy TrEMBL
Match: M5VWE5 (S-protein homolog (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022213mg PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25
Identity = 53/109 (48.62%), Postives = 72/109 (66.06%), Query Frame = 0


Query: 5   SRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCTFTTS 64
           ++W V + N L  G+TL AHCKSK+DDLG+  L  G +++W FKEN   TT +WC  +T 
Sbjct: 17  NKWHVHVVNNLGAGKTLFAHCKSKDDDLGERNLAPGTEFNWSFKENFFGTTLYWCYMSTD 76

Query: 65  LNKRIVMDVFWPE-THPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQWEW 113
             K   +DVFW E  H WL YRCN   C+W+A+DDG+Y+  IPE + E+
Sbjct: 77  -QKHAALDVFWVEGDHSWLQYRCNWKDCIWIAKDDGIYIKIIPENRDEF 124

[Close]

BLAST of CmoCh03G013540 vs. ExPASy TrEMBL
Match: A0A5E4EJG4 (S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B017645 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.7e-25
Identity = 53/107 (49.53%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 7   WKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCTFTTSLN 66
           W V + N L+ G+TL AHCKSK+DDLG+  L  G +++W FKEN   TT +WC  +T   
Sbjct: 35  WHVHVVNNLSAGKTLFAHCKSKDDDLGERNLAPGTEFNWSFKENFFGTTLYWCYMSTD-Q 94

Query: 67  KRIVMDVFWPE-THPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQWEW 113
           K   +DVFW E  H WL YRCN   C+W+A+DDG+Y+  IPE + E+
Sbjct: 95  KHAALDVFWVEGDHSWLQYRCNWKDCIWIAKDDGIYIKIIPENRDEF 140

[Close]

BLAST of CmoCh03G013540 vs. NCBI nr
Match: KAG7034676.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.1 bits (627), Expect = 2.2e-61
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MPPLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCT 60
           MPPLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCT
Sbjct: 15  MPPLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCT 74

Query: 61  FTTSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQWE 112
           FTTSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTNIPEG+ E
Sbjct: 75  FTTSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTNIPEGKRE 125

[Close]

BLAST of CmoCh03G013540 vs. NCBI nr
Match: KAA0052584.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK13240.1 pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 9.5e-41
Identity = 70/105 (66.67%), Postives = 89/105 (84.76%), Query Frame = 0


Query: 1   MPPLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCT 60
           MPP S WKVV+FNQL+PGQ+L  HCKSK++DLG+H L+VGE++SW+FKEN+ STTRFWC+
Sbjct: 33  MPPFSSWKVVVFNQLSPGQSLTVHCKSKDNDLGEHSLRVGEKFSWKFKENLFSTTRFWCS 92

Query: 61  FTTSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTNI 106
            T+S  K + MDVFWPE H WLAYRCN  +C+WVAQDDG+Y+ N+
Sbjct: 93  LTSSSKKTVTMDVFWPERHDWLAYRCNYATCIWVAQDDGIYIVNV 137

[Close]

BLAST of CmoCh03G013540 vs. NCBI nr
Match: KAE8647731.1 (hypothetical protein Csa_003821 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 3.1e-39
Identity = 71/104 (68.27%), Postives = 86/104 (82.69%), Query Frame = 0


Query: 1   MPPLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCT 60
           M PLSRWKVVIF+QLNPG+ LL HCKSK++DLG+H LQV + +SW+FKEN+ STT FWCT
Sbjct: 56  MAPLSRWKVVIFSQLNPGENLLVHCKSKDNDLGEHSLQVSQNFSWKFKENLFSTTLFWCT 115

Query: 61  FTTSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTN 105
            TTS  K++ MDVFWPE H WLA RC+  +C+WVAQDDG+YL N
Sbjct: 116 LTTSSKKKVTMDVFWPERHNWLAIRCSYRTCIWVAQDDGIYLVN 159

[Close]

BLAST of CmoCh03G013540 vs. NCBI nr
Match: XP_023005093.1 (S-protein homolog 1-like [Cucurbita maxima])

HSP 1 Score: 130.2 bits (326), Expect = 1.7e-26
Identity = 58/111 (52.25%), Postives = 70/111 (63.06%), Query Frame = 0


Query: 3   PLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCTFT 62
           PL RW V + N L  GQTLLAHCKSK DDLGDH L  G  +S+ FK+NV  TT FWCT T
Sbjct: 30  PLERWTVQVVNGLGGGQTLLAHCKSKNDDLGDHNLATGALFSFTFKDNVWQTTEFWCTLT 89

Query: 63  TSLNKRIVMDVFWPET--HPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQWE 112
              N     DV+W +T    WL  RC D++CVW+ +DDG+Y+ N    Q E
Sbjct: 90  KPNNAHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDE 140

[Close]

BLAST of CmoCh03G013540 vs. NCBI nr
Match: XP_008235747.1 (PREDICTED: uncharacterized protein LOC103334546 [Prunus mume])

HSP 1 Score: 128.6 bits (322), Expect = 5.1e-26
Identity = 55/109 (50.46%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 5   SRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCTFTTS 64
           +RW V + N L+ GQTL AHCKSK+DDLG+  L  G +++W FKEN   TT +WC  +T 
Sbjct: 33  NRWHVHVVNNLSAGQTLFAHCKSKDDDLGERNLAPGTEFNWSFKENFSGTTLYWCYMSTG 92

Query: 65  LNKRIVMDVFWPE-THPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQWEW 113
             K   +DVFW E  H WL YRCN   C+W+A+DDG+Y+  IPE + E+
Sbjct: 93  -QKHAALDVFWVEGEHSWLQYRCNWKDCIWIAKDDGIYIKIIPENRDEF 140

[Close]

BLAST of CmoCh03G013540 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 102.8 bits (255), Expect = 2.8e-22
Identity = 45/109 (41.28%), Postives = 68/109 (62.39%), Query Frame = 0


Query: 1   MPPLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCT 60
           +P +S W+V + N L  G+TL  HCKSKEDDLG+  L+   ++SW F EN++ +T FWC 
Sbjct: 35  VPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWC- 94

Query: 61  FTTSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQ 110
           +    N  + ++VFW +    L +RC   +C+W A+ DG+YL N   G+
Sbjct: 95  YMNKDNGHMNVNVFWDDV--ILFHRCGWKNCIWTAKTDGLYLWNSASGE 140

[Close]

BLAST of CmoCh03G013540 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-21
Identity = 45/109 (41.28%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 1   MPPLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCT 60
           +P +S W+V + N L  G+TL  HCKSKE+DLGD  L+  +++SW F EN++ +T FWC 
Sbjct: 35  VPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWC- 94

Query: 61  FTTSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQ 110
           + +  +  + + VFW +    L +RC+  +CVW A++DG+YL N   G+
Sbjct: 95  YMSKDDGHMNVKVFWDDV--ILFHRCDWKNCVWTAKNDGLYLWNSAIGE 140

[Close]

BLAST of CmoCh03G013540 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 79.3 bits (194), Expect = 3.3e-15
Identity = 39/112 (34.82%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 8   KVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCTFTTSLNK 67
           KVV+ NQL   + L  HC+SK+DDLG+H+L++G+ Y + F +N+  TT F C      N 
Sbjct: 28  KVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNF 87

Query: 68  RIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLT--NIPEGQWEWKDSLP 118
           +  +D    ET  W   +  + SC W+ ++DG+Y +   +P  + +++D +P
Sbjct: 88  KHHLDFVAYET-SW--SKALEASCKWIGREDGIYFSQDGVPPTK-KYQDGVP 135

[Close]

BLAST of CmoCh03G013540 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-11
Identity = 39/118 (33.05%), Postives = 56/118 (47.46%), Query Frame = 0


Query: 3   PLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCTFT 62
           P S+  V I N L    TLL HCKSK+DDLG+  LQ GE +S+ F       T ++C+F+
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 63  TSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTNIPEGQWE----WKDSL 117
              N+    D++          +C    CVW  + +G    N    Q++    W  SL
Sbjct: 104 WP-NESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPWNKSL 160

[Close]

BLAST of CmoCh03G013540 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-11
Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 0


Query: 24  HCKSKEDDLGDHLLQVGEQYSWEFKENVISTTRFWCTFTTSLNKRIVMDVFWPETHPWLA 83
           HCKSK+DDLG H+ + GE Y W+F  N  ++T ++C F+   + + V D+   E      
Sbjct: 62  HCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDRAERD---F 121

Query: 84  YRCNDYSCVWVAQDDGMY-LTNIPE 108
           YRC   +C W A+ D +Y  +N+P+
Sbjct: 122 YRCR--NCTWNAKKDSLYGYSNLPQ 141

The following BLAST results are available for this feature:

BLAST of CmoCh03G013540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	3.9e-21	41.28	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	1.9e-20	41.28	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLQ5	3.1e-10	33.05	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
F2Q9V4	3.1e-10	37.37	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
Q9FI84	5.3e-10	37.65	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]

BLAST of CmoCh03G013540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UB41	4.6e-41	66.67	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00...	[more]
A0A6J1L199	8.4e-27	52.25	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498184 PE=3 SV=1	[more]
A0A251N118	1.2e-25	48.62	S-protein homolog OS=Prunus persica OX=3760 GN=PRUPE_8G208300 PE=3 SV=1	[more]
M5VWE5	1.2e-25	48.62	S-protein homolog (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022213mg PE=3...	[more]
A0A5E4EJG4	2.7e-25	49.53	S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B017645 PE=3 SV=1	[more]

BLAST of CmoCh03G013540 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034676.1	2.2e-61	98.20	S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAA0052584.1	9.5e-41	66.67	pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK13240.1 pumilio-like...	[more]
KAE8647731.1	3.1e-39	68.27	hypothetical protein Csa_003821 [Cucumis sativus]	[more]
XP_023005093.1	1.7e-26	52.25	S-protein homolog 1-like [Cucurbita maxima]	[more]
XP_008235747.1	5.1e-26	50.46	PREDICTED: uncharacterized protein LOC103334546 [Prunus mume]	[more]

BLAST of CmoCh03G013540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	2.8e-22	41.28	S-protein homologue 1	[more]
AT4G29035.1	1.4e-21	41.28	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	3.3e-15	34.82	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	2.2e-11	33.05	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	3.8e-11	37.65	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 8..112 e-value: 2.5E-26 score: 92.2
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 4..110
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 4..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G013540.1	CmoCh03G013540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region