CmoCh03G012250 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G012250
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Auxin responsive SAUR protein
Location	Cmo_Chr03: 9477132 .. 9478532 (+)
RNA-Seq Expression	CmoCh03G012250
Synteny	CmoCh03G012250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGCAATGCAGCTGCTTTCTGCATATTGCCATGTTCCTTTTCAACTCGAACTGTTCCCAACAATTCAAAGATGATTTGGAGTACACATCAATCCATGAATCCCTTGTTTTCATAACAAGAAACATAACTAATGAAGATGAGATTCAATAATCCATAGTGATCAAAGAAGGCCTGTTTCGGTTTGGAAAATGACGTTGAGATTGGCACGTACGAGCTAGAGCAGGGAACATTGGGCATCCTTGCCGGGAAGACAAGGGTCTGGAAAGGGCTATAAAGAATCTCCTTCTTTCCTCCCTTTATATAGCCCTCTCAAAACAAAGCTAAGTTGATAGCGAAACGTAACAGGTGGTATCAGAGCGAGACACTTGGTGGTGTGCTAGTGAGGATGCTAGGCCTCAAACGGGAGATGGATTGTGAAATCTCACATCGGTTGAAGAGGAGAACAAACCATTCCTTATAAGAGTGTTGAAACCTCTCCCTAGTAGACGCATTTCAAAATCATGAGGCTAATAACGATACATGACAGGCTAAAACAGACAATATCTATTAACGGTGGATTTGGACTATTACATCGTCACTATGCCCAAGAAAGAAAGTTATCTTCATCCCCTAAACTTCAAATCTCATCTCTTGTCCACTCCAATCATGTGGGGCCATAACAAAATTAACTTCAAGCCAGAACTTTGGGAAACAAATCAGTCAACCATTACTCCTTTGCTTAACACCATTTTTCCATATTTGAATATATAAAATCTCATCTCAAAACTATGCAATGAATGTTCGTACAATTGGTATCATCTAGAGATGCAACAATATAATAAAGTAAATTGGTACAGCCAGGCAAGGGTGCATCTACTATGATATATATAATGCACTGTCAGACAGAAAATGGCATACAGAAACGGAGCCCACTGCTTAGCTATATCTATAATGTCAACCATCTAATAGTGTTCTTCATCCACTCTTATATATACCTTTCAGTTTCTCCATCACTAGCCAAAGACTAAAGCTACACACTGATAATATGAAGGGGGGGTTTATAAGAGCATGCGCAAACAAATGGAGGAAGATAGGAAGCAAAGTGGTACCTTGTGCAGCCTGCGAGCAGTGTTGCCAATGGGTTTTGTGGTCTTCCTTGCATGAGGATTGCTTCATTCCGCGGGACGTCCCAAAGGGTCACTTGGTTGTGTATGTGGGTGAGAATAACAGAAGGCTTGTAATCAAAATTAGCCTTCTCAATCATCCTCTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGATTTCACTACGAACTCAAAACTCTGCATTCCTTGTGATGAGAACCTTTTCCTTAGTGTTGTCCGCCGCGCTACCTCACCTGATAATCGACAGAGCCCTCTGTGTCTTTGA

mRNA sequence

ATGGATAGCAATGCAGCTGCTTTCTGCATATTGCCATGTTCCTTTTCAACTCGAACTGTTCCCAACAATTCAAAGATGATTTGGAGTACACATCAATCCATGAATCCCTTTTTCTCCATCACTAGCCAAAGACTAAAGCTACACACTGATAATATGAAGGGGGGGTTTATAAGAGCATGCGCAAACAAATGGAGGAAGATAGGAAGCAAAGTGGTACCTTGTGCAGCCTGCGAGCAGTGTTGCCAATGGGTTTTGTGGTCTTCCTTGCATGAGGATTGCTTCATTCCGCGGGACGTCCCAAAGGGTCACTTGGTTGTGTATGTGGGTGAGAATAACAGAAGGCTTGTAATCAAAATTAGCCTTCTCAATCATCCTCTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGATTTCACTACGAACTCAAAACTCTGCATTCCTTGTGATGAGAACCTTTTCCTTAGTGTTGTCCGCCGCGCTACCTCACCTGATAATCGACAGAGCCCTCTGTGTCTTTGA

Coding sequence (CDS)

ATGGATAGCAATGCAGCTGCTTTCTGCATATTGCCATGTTCCTTTTCAACTCGAACTGTTCCCAACAATTCAAAGATGATTTGGAGTACACATCAATCCATGAATCCCTTTTTCTCCATCACTAGCCAAAGACTAAAGCTACACACTGATAATATGAAGGGGGGGTTTATAAGAGCATGCGCAAACAAATGGAGGAAGATAGGAAGCAAAGTGGTACCTTGTGCAGCCTGCGAGCAGTGTTGCCAATGGGTTTTGTGGTCTTCCTTGCATGAGGATTGCTTCATTCCGCGGGACGTCCCAAAGGGTCACTTGGTTGTGTATGTGGGTGAGAATAACAGAAGGCTTGTAATCAAAATTAGCCTTCTCAATCATCCTCTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGATTTCACTACGAACTCAAAACTCTGCATTCCTTGTGATGAGAACCTTTTCCTTAGTGTTGTCCGCCGCGCTACCTCACCTGATAATCGACAGAGCCCTCTGTGTCTTTGA

Protein sequence

MDSNAAAFCILPCSFSTRTVPNNSKMIWSTHQSMNPFFSITSQRLKLHTDNMKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSPDNRQSPLCL

Homology

[Close]

BLAST of CmoCh03G012250 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.1e-14
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 91  EDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPC 150
           EDC +P DVPKGH  VYVGEN  R ++ IS L HP F++LL +A++EF F  +  L IPC
Sbjct: 36  EDC-LPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPC 95

Query: 151 DENLF 156
           DE +F
Sbjct: 96  DELVF 99

[Close]

BLAST of CmoCh03G012250 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.9e-13
Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 0


Query: 90  HEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIP 149
           ++D  +P DVPKGH VVYVGE   R ++ IS L+HP F+ LL ++++EF F  +  + IP
Sbjct: 30  NDDSGLPNDVPKGHFVVYVGERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIP 89

Query: 150 CDENLFLS 158
           C E  FLS
Sbjct: 90  CQEVDFLS 97

[Close]

BLAST of CmoCh03G012250 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 95  IPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENL 154
           +P+DVPKGH  VYVG N  R ++ IS L+H  F+ LL  A++EF F  +  L IPCDE  
Sbjct: 44  LPQDVPKGHFPVYVGPNRSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVF 103

Query: 155 FLSVV 160
           F S++
Sbjct: 104 FRSLI 108

[Close]

BLAST of CmoCh03G012250 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 98  DVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFT-TNSKLCIPCDENLF 156
           D PKG+L VYVGEN +R VI +S LN PLF+ LL QA++EF +      L IPC E+LF
Sbjct: 24  DAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLF 82

[Close]

BLAST of CmoCh03G012250 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 9.1e-10
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 98  DVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFT-TNSKLCIPCDENLFL 157
           +VPKG+LVVYVG+  RR +I +S LN P F+ LL+QA++EF +      L IPC E+ FL
Sbjct: 24  EVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFL 83

Query: 158 SV 159
           +V
Sbjct: 84  TV 85

[Close]

BLAST of CmoCh03G012250 vs. ExPASy TrEMBL
Match: A0A1S4DXL1 (indole-3-acetic acid-induced protein ARG7 OS=Cucumis melo OX=3656 GN=LOC103491168 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.3e-59
Identity = 110/122 (90.16%), Postives = 112/122 (91.80%), Query Frame = 0


Query: 53  KGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENN 112
           KG FIRACANKWRKIGSKVVPC ACE CCQWVLWS LHEDCFIPRDVPKGHLVVYVGEN 
Sbjct: 3   KGRFIRACANKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENK 62

Query: 113 RRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSPDNRQSPL 172
           RR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCDENLFLSVV RA++PDNRQ PL
Sbjct: 63  RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVDRASAPDNRQIPL 122

Query: 173 CL 175
            L
Sbjct: 123 RL 124

[Close]

BLAST of CmoCh03G012250 vs. ExPASy TrEMBL
Match: A0A6J1CQ37 (uncharacterized protein LOC111013697 OS=Momordica charantia OX=3673 GN=LOC111013697 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 4.2e-58
Identity = 106/118 (89.83%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 46  KLHTDNMKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLV 105
           KLHT+NMKG FIRAC NKWRKIGSKVVPC ACE CCQWVLWS LHEDCFIP DVPKGHLV
Sbjct: 25  KLHTENMKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLV 84

Query: 106 VYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRAT 164
           VYVGENNRR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCDE+LFLSVV RA+
Sbjct: 85  VYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLFLSVVHRAS 142

[Close]

BLAST of CmoCh03G012250 vs. ExPASy TrEMBL
Match: A0A6J1HEL5 (auxin-induced protein 15A OS=Cucurbita moschata OX=3662 GN=LOC111463496 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 6.7e-56
Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 52  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGEN 111
           MKG FIRACANKWRK+GSKVVPC  CE CCQWVLWS LHEDCFIPRDVPKGHLVVYVGEN
Sbjct: 1   MKGKFIRACANKWRKLGSKVVPCTPCEHCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGEN 60

Query: 112 NRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSP 166
            RR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCDENLFLSVV RA+SP
Sbjct: 61  YRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVHRASSP 114

[Close]

BLAST of CmoCh03G012250 vs. ExPASy TrEMBL
Match: A0A6J1I941 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111471142 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.3e-55
Identity = 102/113 (90.27%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 52  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGEN 111
           MKG FIRACANKWRK+GSKVVPC  CE CCQWVLWS LHEDCFIPRDVPKGHLVVYVGEN
Sbjct: 1   MKGKFIRACANKWRKLGSKVVPCTPCEHCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGEN 60

Query: 112 NRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATS 165
            RR VIKISLLNHPLFKALLDQAQDEFDFT+NSKLCIPCDENLFLSVV RA+S
Sbjct: 61  YRRFVIKISLLNHPLFKALLDQAQDEFDFTSNSKLCIPCDENLFLSVVHRASS 113

[Close]

BLAST of CmoCh03G012250 vs. ExPASy TrEMBL
Match: A0A2N9EJG5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2777 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.1e-50
Identity = 93/123 (75.61%), Postives = 107/123 (86.99%), Query Frame = 0


Query: 52  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGEN 111
           MKG  +R C NKWRK+GS+V PCAACE CCQW  W S HE+  IP+DVPKGHLVVYVGEN
Sbjct: 4   MKGKLLRECMNKWRKMGSRVGPCAACEYCCQWAFWPSTHEEKSIPKDVPKGHLVVYVGEN 63

Query: 112 NRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSPDNRQSP 171
            +R VIKI+LLNHPLFKALLDQA+DE+DFTT+SKLCIPCDENLFLSVVR A+SP++R+ P
Sbjct: 64  YKRFVIKITLLNHPLFKALLDQARDEYDFTTDSKLCIPCDENLFLSVVRCASSPEDRRIP 123

Query: 172 LCL 175
           LCL
Sbjct: 124 LCL 126

[Close]

BLAST of CmoCh03G012250 vs. NCBI nr
Match: KAG6604414.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034565.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.7 bits (683), Expect = 7.0e-68
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 52  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGEN 111
           MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGEN
Sbjct: 1   MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGEN 60

Query: 112 NRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSPDNRQSP 171
           NRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSPDNRQSP
Sbjct: 61  NRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSPDNRQSP 120

Query: 172 LCL 175
           LCL
Sbjct: 121 LCL 123

[Close]

BLAST of CmoCh03G012250 vs. NCBI nr
Match: XP_038883934.1 (auxin-responsive protein SAUR50 [Benincasa hispida])

HSP 1 Score: 245.4 bits (625), Expect = 3.7e-61
Identity = 113/122 (92.62%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 53  KGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENN 112
           KG FIRACANKWRKIGSKVVPC ACE CCQWVLWS LHEDCFIPRDVPKGHLVVYVGENN
Sbjct: 3   KGRFIRACANKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENN 62

Query: 113 RRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSPDNRQSPL 172
           RR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCDENLFLSVVRRA+SPDNRQ PL
Sbjct: 63  RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRRASSPDNRQIPL 122

Query: 173 CL 175
            L
Sbjct: 123 HL 124

[Close]

BLAST of CmoCh03G012250 vs. NCBI nr
Match: XP_016900724.1 (PREDICTED: indole-3-acetic acid-induced protein ARG7 [Cucumis melo] >XP_031742593.1 indole-3-acetic acid-induced protein ARG7 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 2.7e-59
Identity = 110/122 (90.16%), Postives = 112/122 (91.80%), Query Frame = 0


Query: 53  KGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENN 112
           KG FIRACANKWRKIGSKVVPC ACE CCQWVLWS LHEDCFIPRDVPKGHLVVYVGEN 
Sbjct: 3   KGRFIRACANKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENK 62

Query: 113 RRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSPDNRQSPL 172
           RR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCDENLFLSVV RA++PDNRQ PL
Sbjct: 63  RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVDRASAPDNRQIPL 122

Query: 173 CL 175
            L
Sbjct: 123 RL 124

[Close]

BLAST of CmoCh03G012250 vs. NCBI nr
Match: XP_022143895.1 (uncharacterized protein LOC111013697 [Momordica charantia])

HSP 1 Score: 234.2 bits (596), Expect = 8.6e-58
Identity = 106/118 (89.83%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 46  KLHTDNMKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLV 105
           KLHT+NMKG FIRAC NKWRKIGSKVVPC ACE CCQWVLWS LHEDCFIP DVPKGHLV
Sbjct: 25  KLHTENMKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLV 84

Query: 106 VYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRAT 164
           VYVGENNRR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCDE+LFLSVV RA+
Sbjct: 85  VYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLFLSVVHRAS 142

[Close]

BLAST of CmoCh03G012250 vs. NCBI nr
Match: KAG6595237.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 228.8 bits (582), Expect = 3.6e-56
Identity = 104/114 (91.23%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 52  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGEN 111
           MKG FIRACANKWRK+GSKVVPC  CE CCQWVLWS LHEDCFIPRDVPKGHLVVYVGEN
Sbjct: 1   MKGKFIRACANKWRKLGSKVVPCTPCEHCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGEN 60

Query: 112 NRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSP 166
            RR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCDENLFLSVVRRA+SP
Sbjct: 61  YRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRRASSP 114

[Close]

BLAST of CmoCh03G012250 vs. TAIR 10
Match: AT2G37030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-34
Identity = 67/124 (54.03%), Postives = 91/124 (73.39%), Query Frame = 0


Query: 52  MKGGFIRACANKWRKIGSKV-VPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGE 111
           MK  FI++C  K +K+ SKV +PCA+CE C + + W+   E   IPRDVPKGHLVVYVGE
Sbjct: 1   MKSKFIKSCEKKLKKMTSKVIIPCASCESCYERICWAFKKEAEVIPRDVPKGHLVVYVGE 60

Query: 112 NNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSPDNRQS 171
             +R VI I+LL HPLF+ALLDQAQD + F+ +S+L IPC+E+ FL VVR A +P ++ +
Sbjct: 61  EYKRFVININLLKHPLFQALLDQAQDAYGFSADSRLWIPCNESTFLDVVRCAGAPQHQNN 120

Query: 172 PLCL 175
            +C+
Sbjct: 121 CICI 124

[Close]

BLAST of CmoCh03G012250 vs. TAIR 10
Match: AT3G53250.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.4 bits (298), Expect = 2.9e-27
Identity = 58/107 (54.21%), Postives = 79/107 (73.83%), Query Frame = 0


Query: 66  KIGSKVVPC--AACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLN 125
           K  S V+PC  ++CE CC  V W    E+  IP+DVP+GHLVVYVG++ +R VIK+SLL 
Sbjct: 2   KSKSIVLPCCTSSCESCCDKVSWGFKKENEAIPKDVPRGHLVVYVGDDYKRFVIKMSLLT 61

Query: 126 HPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSPDNRQS 171
           HP+FKALLDQAQD ++   +S+L IPCDEN FL VVR + +P ++++
Sbjct: 62  HPIFKALLDQAQDAYN---SSRLWIPCDENTFLDVVRCSGAPQHQRN 105

[Close]

BLAST of CmoCh03G012250 vs. TAIR 10
Match: AT5G03310.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 92.4 bits (228), Expect = 3.8e-19
Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 61  ANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVG---ENNRRLVI 120
           A  W+++ S+V            V   +  +   IP DVPKGHLVVYVG   E  +R VI
Sbjct: 9   AKAWKQMSSRVAK--------HRVATGNPKDQYHIPHDVPKGHLVVYVGKDEETYKRFVI 68

Query: 121 KISLLNHPLFKALLDQAQDEF--DFTT-NSKLCIPCDENLFLSVVRRAT 164
           KI+LL+ P+F+ALLDQ++DE   DFT+ +SKLCI CDE LFL V+R A+
Sbjct: 69  KITLLHDPIFRALLDQSKDEAYDDFTSGDSKLCIACDETLFLEVLRCAS 109

[Close]

BLAST of CmoCh03G012250 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 79.3 bits (194), Expect = 3.3e-15
Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = 0


Query: 66  KIGSKVVPCAACEQC---CQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLL 125
           K  SK+   A  +Q    C  +  +  +++  +P DVPKGH  VYVGE   R ++ IS L
Sbjct: 4   KRSSKLTQTAMLKQILKRCSSLAKNQCYDEDGLPVDVPKGHFPVYVGEKRSRYIVPISFL 63

Query: 126 NHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSV 159
            HP FK+LL QA++EF F  +  L IPC+E +F S+
Sbjct: 64  THPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSL 99

[Close]

BLAST of CmoCh03G012250 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 79.0 bits (193), Expect = 4.3e-15
Identity = 33/76 (43.42%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 95  IPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENL 154
           +P DVP GH+ VYVG + RR V++ + LNHP+ + LL QA++EF F     L IPC+E++
Sbjct: 38  VPSDVPSGHVAVYVGSSCRRFVVRATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESV 97

Query: 155 FLSVVRRATSPDNRQS 171
           F   +R  +  D+ +S
Sbjct: 98  FEESIRFISRSDSTRS 113

The following BLAST results are available for this feature:

BLAST of CmoCh03G012250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	6.1e-14	55.38	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
P0DKL1	3.9e-13	48.53	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
Q9SL45	1.3e-11	49.23	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P32295	1.4e-10	55.93	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
P33080	9.1e-10	51.61	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CmoCh03G012250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DXL1	1.3e-59	90.16	indole-3-acetic acid-induced protein ARG7 OS=Cucumis melo OX=3656 GN=LOC10349116...	[more]
A0A6J1CQ37	4.2e-58	89.83	uncharacterized protein LOC111013697 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1HEL5	6.7e-56	90.35	auxin-induced protein 15A OS=Cucurbita moschata OX=3662 GN=LOC111463496 PE=3 SV=...	[more]
A0A6J1I941	3.3e-55	90.27	auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111471142 PE=3 ...	[more]
A0A2N9EJG5	1.1e-50	75.61	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2777 PE=3 SV=1	[more]

BLAST of CmoCh03G012250 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604414.1	7.0e-68	100.00	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_038883934.1	3.7e-61	92.62	auxin-responsive protein SAUR50 [Benincasa hispida]	[more]
XP_016900724.1	2.7e-59	90.16	PREDICTED: indole-3-acetic acid-induced protein ARG7 [Cucumis melo] >XP_03174259...	[more]
XP_022143895.1	8.6e-58	89.83	uncharacterized protein LOC111013697 [Momordica charantia]	[more]
KAG6595237.1	3.6e-56	91.23	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh03G012250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37030.1	1.4e-34	54.03	SAUR-like auxin-responsive protein family	[more]
AT3G53250.1	2.9e-27	54.21	SAUR-like auxin-responsive protein family	[more]
AT5G03310.1	3.8e-19	48.62	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	3.3e-15	41.67	SAUR-like auxin-responsive protein family	[more]
AT1G75590.1	4.3e-15	43.42	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 95..160 e-value: 1.2E-23 score: 83.1
None	No IPR available	PANTHER	PTHR31374:SF314	AUXIN-RESPONSIVE FAMILY PROTEIN	coord: 55..174
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 55..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G012250.1	CmoCh03G012250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin