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CmoCh03G011440 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAACCACGCGGTTCGATGTTTAGATGTTCGCTTGAATCGATCAATCAAATAACAAAACAGAGTTCCCCCCATCAATCGTCTCAACTTCAACGGCGTCGCTGGAGATCTGCGAAACCTAACTCGCACAGATCAGGAGGAAAGAAGTTCAGATTAGCACGATCATGGATTATACAGCGCGTAGGAGTGGAGGAGGCCTCCTTGAAGGGCTTTACAGAGTAATTATGCGCCGGAATTCCGTTTACGTCACCTTCATTATCGCCGGCGCTTTCGCTGGAGAGCGGGTAAGGATCATAAATCATCTCTTTATTGTGCACTGGATTCATCTTTTTGGTTCCTTGAGTTACCTGCTTGCTGAGGGATAGAGAGAAGTGAGAAGAAAAATACAATTTCAGTGGGCAATAGACCGTATTACTTTGTCAATTGGTTTATCTGGATTTGCGAGATTCGGATGTAGGAACCATTTCTAATTGTCGAAATGTTGAATTCTGAAATTAACTGGCTTACTAATGTTATCTTCGTTTTGTTAATTCGAACCGATAATCTCCATTGCTGAAAAGGAGAGGAAAAAAACAGAGCAATTTCTTGGACGTTTTGGACAGAAGTTGCTTTCTGGAAGGAATTCGGTTTTTGATTTTGCGGCTGTGAAGAAATCTATGGACTTGAAAGTTTAATATGGAACCTTGAAGATCTAATGATATGCTTGTTTATTTTCATGTAAATTCGTTCCGGCCAAATGATCTCTGTAGAGTTTTAGCGTGTTTTCTTTTGGATTATGCAATTGGCTTGCCTAACCTCCCGATACTAGGAGAATTCTTTCATTTGTTCTTCTTAAAGCTCGTTAAATCTGAGGGGTGAAGTATTTCATCATTTTGGGGTATGAAAATTTTGTCAACCGTTTTCACATTCATTCTTCTGTACCATTTGCTGGAACATGCATTCCATTGCTTGCTACAAAATTATTTGGCGTTCCTTAGGTTTATTTTTTAAAATTATTTTGGTTTTCTGGGTTGTGTAAGACTATGAACATCGGTATTAGCTTCTTACTAGTTTTGGCTTTCCTGTTGTAGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAATACAACAATGTTGGGGTATGACATAACTATCCTTTGGTTTATTTTTCTTTAATTTGAATAGTCTTTGCAATTGTCAGGGAACTGAAGTCGAAAATCACTACCTCATTTATCATATCACATTAAACTTTAAGTTTGCTTTCTGAATGGGACCAATTTGTGAACCTTTTTTTTGTTTATTATGCTTATTTTTACTGAGAGTGGAATAAAATGGTCAAAATTTTGTGTCAATTTTTTGTTTTTGTACATTCTATATGCAATATATGAACCAAAACTATAAAGATTACAATTTCATTGATGTTTTCAAAATGTTGAAACAAGAATGAGAAACCAATTAACAGGAAATTGGATATGCTTTGAAAAAGTTAGAAATGAGAAATGGGAAACATTCTAAATATAAATGTTTTTTCAACTAGATCAATAAGAACAATGTACATAGTTAAGGGCTTAAGGGAATGAGTTTAACTATGGTGCCTTGATATACTACGAAGTATTTGGCAACTACATGTAGTAGAGTTAAGTGGTTTTCTTGCGAGAATAAATGTTCATGAGATGATTGTCTTGTGGAAATAGTCGAGGTTCATGCAAGCTAGTGTGAACCTTCACCGATACTAAAAGGTCTGTCCATCAGTTTAAGTATTGTTTCCTCTCCACCCAGTTCAACTTACCCCTCTCGAGTTATTGGAGATGTTTATTGGCATACATGAGTTCTGCAAAGTAGTTGCCAAATTTCTGAGATAGAACTTCAATCTGGAAACTTATTACTATAAGCAATGTTTGTGGCCGAGTATTAGCTTTGAATTTTGATTGTTTACCCCTTTTGCTGCAGAAACGCTACGACGACATTTCGGTTTTGGGGCAAAGACAATCAGAAGAATGATAGTTGCCTCGATGATTTGGTTCTCATCATTTCATTGTTTATAACTACAGTCATCTGATTAATTTTTTTGAAATAAGTTTTAGATGTCGGATTGTGGGCACCTTATATATTGACTCTTGAGCTTGGTGGTCTCTTTCGATGTCGTTTCTCATTATTCATGTTCATCTATGGAATTACCAATCAAATGTTCCTCTTTTATCAGGCTATATTATTACATAGCAAATCAAGTGGGTCTAGACTTATAAAAGCACCGTTTAAAATTGTATGATTATAAGGATATCTCGATATGGAGTTGGATTATCGGACTTGGTGGTGGCTCCTCTTACTAGTAAAGGGAATTGGACGGGGTGATATTGGTGCT AAAAAAAAAAAAACCACGCGGTTCGATGTTTAGATGTTCGCTTGAATCGATCAATCAAATAACAAAACAGAGTTCCCCCCATCAATCGTCTCAACTTCAACGGCGTCGCTGGAGATCTGCGAAACCTAACTCGCACAGATCAGGAGGAAAGAAGTTCAGATTAGCACGATCATGGATTATACAGCGCGTAGGAGTGGAGGAGGCCTCCTTGAAGGGCTTTACAGAGTAATTATGCGCCGGAATTCCGTTTACGTCACCTTCATTATCGCCGGCGCTTTCGCTGGAGAGCGGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAATACAACAATGTTGGGAAACGCTACGACGACATTTCGGTTTTGGGGCAAAGACAATCAGAAGAATGATAGTTGCCTCGATGATTTGGTTCTCATCATTTCATTGTTTATAACTACAGTCATCTGATTAATTTTTTTGAAATAAGTTTTAGATGTCGGATTGTGGGCACCTTATATATTGACTCTTGAGCTTGGTGGTCTCTTTCGATGTCGTTTCTCATTATTCATGTTCATCTATGGAATTACCAATCAAATGTTCCTCTTTTATCAGGCTATATTATTACATAGCAAATCAAGTGGGTCTAGACTTATAAAAGCACCGTTTAAAATTGTATGATTATAAGGATATCTCGATATGGAGTTGGATTATCGGACTTGGTGGTGGCTCCTCTTACTAGTAAAGGGAATTGGACGGGGTGATATTGGTGCT ATGGATTATACAGCGCGTAGGAGTGGAGGAGGCCTCCTTGAAGGGCTTTACAGAGTAATTATGCGCCGGAATTCCGTTTACGTCACCTTCATTATCGCCGGCGCTTTCGCTGGAGAGCGGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAATACAACAATGTTGGGAAACGCTACGACGACATTTCGGTTTTGGGGCAAAGACAATCAGAAGAATGA MDYTARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFAGERAVDYGVHKLWEYNNVGKRYDDISVLGQRQSEE Homology
BLAST of CmoCh03G011440 vs. ExPASy Swiss-Prot
Match: Q9LXJ2 (Cytochrome b-c1 complex subunit 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=QCR9 PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 1.7e-26 Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 0
BLAST of CmoCh03G011440 vs. ExPASy Swiss-Prot
Match: P46270 (Cytochrome b-c1 complex subunit 9 OS=Solanum tuberosum OX=4113 PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.6e-24 Identity = 53/72 (73.61%), Postives = 60/72 (83.33%), Query Frame = 0
BLAST of CmoCh03G011440 vs. ExPASy Swiss-Prot
Match: Q7SGT7 (Cytochrome b-c1 complex subunit 9, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=qcr9 PE=1 SV=2) HSP 1 Score: 47.4 bits (111), Expect = 8.1e-05 Identity = 21/50 (42.00%), Postives = 32/50 (64.00%), Query Frame = 0
BLAST of CmoCh03G011440 vs. ExPASy TrEMBL
Match: A0A6J1EFN3 (cytochrome b-c1 complex subunit 9-like OS=Cucurbita moschata OX=3662 GN=LOC111432985 PE=3 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 5.6e-33 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of CmoCh03G011440 vs. ExPASy TrEMBL
Match: A0A6J1IJX8 (cytochrome b-c1 complex subunit 9-like OS=Cucurbita maxima OX=3661 GN=LOC111477790 PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.3e-31 Identity = 70/72 (97.22%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of CmoCh03G011440 vs. ExPASy TrEMBL
Match: A0A5B6V7D5 (Cytochrome b-c1 complex subunit 9-like OS=Gossypium australe OX=47621 GN=EPI10_000274 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.3e-29 Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of CmoCh03G011440 vs. ExPASy TrEMBL
Match: A0A2P5WMW4 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A01G219200v1 PE=3 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.7e-29 Identity = 65/72 (90.28%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of CmoCh03G011440 vs. ExPASy TrEMBL
Match: A0A5D3AM24 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A01G223300v1 PE=3 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.7e-29 Identity = 65/72 (90.28%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of CmoCh03G011440 vs. NCBI nr
Match: XP_022925598.1 (cytochrome b-c1 complex subunit 9-like [Cucurbita moschata]) HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of CmoCh03G011440 vs. NCBI nr
Match: KAG7034498.1 (hypothetical protein SDJN02_04228, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147.5 bits (371), Expect = 4.4e-32 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of CmoCh03G011440 vs. NCBI nr
Match: XP_023543185.1 (cytochrome b-c1 complex subunit 9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 145.6 bits (366), Expect = 1.7e-31 Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of CmoCh03G011440 vs. NCBI nr
Match: XP_022977446.1 (cytochrome b-c1 complex subunit 9-like [Cucurbita maxima]) HSP 1 Score: 144.1 bits (362), Expect = 4.8e-31 Identity = 70/72 (97.22%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of CmoCh03G011440 vs. NCBI nr
Match: KAG6604347.1 (Cytochrome b-c1 complex subunit 9, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 139.0 bits (349), Expect = 1.6e-29 Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of CmoCh03G011440 vs. TAIR 10
Match: AT3G52730.1 (ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein ) HSP 1 Score: 119.4 bits (298), Expect = 1.2e-27 Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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