CmoCh03G011180 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G011180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	COPII coat assembly protein SEC16, putative
Location	Cmo_Chr03: 8978180 .. 8978659 (+)
RNA-Seq Expression	CmoCh03G011180
Synteny	CmoCh03G011180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAATCCGCCGCACAGAAAACCTACCCACCGCCGTCGCCGTCGCCATCACCTGCTAATCTCTGCCGCAGAAGCTTGATTCCCTCCTCCGCCATGCCTCCGCAAAACGGCACCCTTTCCCCTGCTCCACCGCCGTCCCCGATTGACTTGAGGCTCCTCTCCAAGTCATCTTCTCAATCCTACACCTCCCTCAAGGACATCCTTCCCTCCTCCGCCGTCGCCGTCAACTCTCCCACCGCCGCTTCCCCCGCTAACTCCGGCTACGAAATCTTGATCCGCAACCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAACCTATGTCCGCTTCGTCCTATTCCGCTGGCCCCAATCTTTTCCACGGTTTATGGCTCCGATTCTCTACCGGAAATCCGATCTCCAGTTGTCTCGGATTCATCAGAGGCTGTATCATTCCGTCAATAATCCGAGTCTTCCGGTCCTGCATTTGCCTATGA

mRNA sequence

ATGGCCAAATCCGCCGCACAGAAAACCTACCCACCGCCGTCGCCGTCGCCATCACCTGCTAATCTCTGCCGCAGAAGCTTGATTCCCTCCTCCGCCATGCCTCCGCAAAACGGCACCCTTTCCCCTGCTCCACCGCCGTCCCCGATTGACTTGAGGCTCCTCTCCAAGTCATCTTCTCAATCCTACACCTCCCTCAAGGACATCCTTCCCTCCTCCGCCGTCGCCGTCAACTCTCCCACCGCCGCTTCCCCCGCTAACTCCGGCTACGAAATCTTGATCCGCAACCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAACCTATGTCCGCTTCGTCCTATTCCGCTGGCCCCAATCTTTTCCACGGTTTATGGCTCCGATTCTCTACCGGAAATCCGATCTCCAGTTGTCTCGGATTCATCAGAGGCTGTATCATTCCGTCAATAATCCGAGTCTTCCGGTCCTGCATTTGCCTATGA

Coding sequence (CDS)

ATGGCCAAATCCGCCGCACAGAAAACCTACCCACCGCCGTCGCCGTCGCCATCACCTGCTAATCTCTGCCGCAGAAGCTTGATTCCCTCCTCCGCCATGCCTCCGCAAAACGGCACCCTTTCCCCTGCTCCACCGCCGTCCCCGATTGACTTGAGGCTCCTCTCCAAGTCATCTTCTCAATCCTACACCTCCCTCAAGGACATCCTTCCCTCCTCCGCCGTCGCCGTCAACTCTCCCACCGCCGCTTCCCCCGCTAACTCCGGCTACGAAATCTTGATCCGCAACCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAACCTATGTCCGCTTCGTCCTATTCCGCTGGCCCCAATCTTTTCCACGGTTTATGGCTCCGATTCTCTACCGGAAATCCGATCTCCAGTTGTCTCGGATTCATCAGAGGCTGTATCATTCCGTCAATAATCCGAGTCTTCCGGTCCTGCATTTGCCTATGA

Protein sequence

MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQSYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNLFHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL

Homology

[Close]

BLAST of CmoCh03G011180 vs. ExPASy TrEMBL
Match: A0A6J1EDY2 (uncharacterized protein LOC111433319 OS=Cucurbita moschata OX=3662 GN=LOC111433319 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.2e-80
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQ 60
           MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQ
Sbjct: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQ 60

Query: 61  SYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL 120
           SYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL
Sbjct: 61  SYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL 120

Query: 121 FHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 160
           FHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL
Sbjct: 121 FHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 159

[Close]

BLAST of CmoCh03G011180 vs. ExPASy TrEMBL
Match: A0A6J1IS66 (uncharacterized protein LOC111478820 OS=Cucurbita maxima OX=3661 GN=LOC111478820 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.1e-79
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQ 60
           MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQ
Sbjct: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQ 60

Query: 61  SYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL 120
           SYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL
Sbjct: 61  SYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL 120

Query: 121 FHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 160
           FH  WLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCIC+
Sbjct: 121 FHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICI 159

[Close]

BLAST of CmoCh03G011180 vs. ExPASy TrEMBL
Match: A0A5A7SL81 (Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00720 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.7e-54
Identity = 125/161 (77.64%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLS-KSSS 60
           MAKSAAQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSS
Sbjct: 1   MAKSAAQLTYPPPSPS-----LRRTTFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSS 60

Query: 61  QSYTSLKDILPS-SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGP 120
           QSYTSLKDILPS SA AVNSPTAASPANS YEI IRNRLVKQAAWAYLQPMSASSYSAGP
Sbjct: 61  QSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGP 120

Query: 121 NLFHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 160
           N FH   LRFSTGNPI SC GFI   IIP+IIR FR CICL
Sbjct: 121 NFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL 156

[Close]

BLAST of CmoCh03G011180 vs. ExPASy TrEMBL
Match: A0A5D3C6C7 (Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001710 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.7e-54
Identity = 125/161 (77.64%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLS-KSSS 60
           MAKSAAQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSS
Sbjct: 1   MAKSAAQLTYPPPSPS-----LRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSS 60

Query: 61  QSYTSLKDILPS-SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGP 120
           QSYTSLKDILPS SA AVNSPTAASPANS YEI IRNRLVKQAAWAYLQPMSASSYSAGP
Sbjct: 61  QSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGP 120

Query: 121 NLFHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 160
           N FH   LRFSTGNPI SC GFI   IIP+IIR FR CICL
Sbjct: 121 NFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL 156

[Close]

BLAST of CmoCh03G011180 vs. ExPASy TrEMBL
Match: A0A1S3CHC6 (uncharacterized protein LOC103500927 OS=Cucumis melo OX=3656 GN=LOC103500927 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.7e-54
Identity = 125/161 (77.64%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLS-KSSS 60
           MAKSAAQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSS
Sbjct: 1   MAKSAAQLTYPPPSPS-----LRRTTFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSS 60

Query: 61  QSYTSLKDILPS-SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGP 120
           QSYTSLKDILPS SA AVNSPTAASPANS YEI IRNRLVKQAAWAYLQPMSASSYSAGP
Sbjct: 61  QSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGP 120

Query: 121 NLFHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 160
           N FH   LRFSTGNPI SC GFI   IIP+IIR FR CICL
Sbjct: 121 NFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL 156

[Close]

BLAST of CmoCh03G011180 vs. NCBI nr
Match: XP_022926106.1 (uncharacterized protein LOC111433319 [Cucurbita moschata] >KAG6604323.1 hypothetical protein SDJN03_04932, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034475.1 hypothetical protein SDJN02_04204, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.9 bits (790), Expect = 2.5e-80
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQ 60
           MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQ
Sbjct: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQ 60

Query: 61  SYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL 120
           SYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL
Sbjct: 61  SYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL 120

Query: 121 FHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 160
           FHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL
Sbjct: 121 FHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 159

[Close]

BLAST of CmoCh03G011180 vs. NCBI nr
Match: XP_022979075.1 (uncharacterized protein LOC111478820 [Cucurbita maxima])

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQ 60
           MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQ
Sbjct: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQ 60

Query: 61  SYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL 120
           SYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL
Sbjct: 61  SYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL 120

Query: 121 FHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 160
           FH  WLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCIC+
Sbjct: 121 FHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICI 159

[Close]

BLAST of CmoCh03G011180 vs. NCBI nr
Match: XP_023544532.1 (uncharacterized protein LOC111804081 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 2.4e-78
Identity = 158/161 (98.14%), Postives = 158/161 (98.14%), Query Frame = 0


Query: 1   MAKSAAQKTYPP--PSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSS 60
           MAKSAAQKTYPP  PSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSS
Sbjct: 1   MAKSAAQKTYPPPSPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSS 60

Query: 61  SQSYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGP 120
           SQSYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGP
Sbjct: 61  SQSYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGP 120

Query: 121 NLFHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 160
           NLFHG WLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL
Sbjct: 121 NLFHGFWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 161

[Close]

BLAST of CmoCh03G011180 vs. NCBI nr
Match: XP_038883302.1 (uncharacterized protein LOC120074291 [Benincasa hispida])

HSP 1 Score: 239.2 bits (609), Expect = 2.4e-59
Identity = 133/163 (81.60%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGT---LSPAPPPSPIDLRLLS-K 60
           MAKSAAQ TYPPPSPS S  NL  R+ IPSS MPP NGT   +SP PPPSPI+LRLLS K
Sbjct: 1   MAKSAAQITYPPPSPSLS--NLRHRAFIPSSPMPPPNGTVSGVSPPPPPSPINLRLLSFK 60

Query: 61  SSSQSYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSA 120
           SSSQSYTSLKDILPS++ AVNSPTAASPANSGYEI IRNRLVKQAAWAYLQPMSASSYSA
Sbjct: 61  SSSQSYTSLKDILPSASAAVNSPTAASPANSGYEISIRNRLVKQAAWAYLQPMSASSYSA 120

Query: 121 GPNLFHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 160
           GPN FH  WLRFST NPI  CLGFIRG IIP+IIRVFR CICL
Sbjct: 121 GPNFFHRFWLRFSTANPIYGCLGFIRGTIIPAIIRVFRFCICL 161

[Close]

BLAST of CmoCh03G011180 vs. NCBI nr
Match: XP_008462609.1 (PREDICTED: uncharacterized protein LOC103500927 [Cucumis melo] >KAA0025225.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa])

HSP 1 Score: 219.5 bits (558), Expect = 2.0e-53
Identity = 125/161 (77.64%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLS-KSSS 60
           MAKSAAQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSS
Sbjct: 1   MAKSAAQLTYPPPSPS-----LRRTTFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSS 60

Query: 61  QSYTSLKDILPS-SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGP 120
           QSYTSLKDILPS SA AVNSPTAASPANS YEI IRNRLVKQAAWAYLQPMSASSYSAGP
Sbjct: 61  QSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGP 120

Query: 121 NLFHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 160
           N FH   LRFSTGNPI SC GFI   IIP+IIR FR CICL
Sbjct: 121 NFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL 156

[Close]

BLAST of CmoCh03G011180 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 3.2e-09
Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 0


Query: 15  PSPSPANLCRRSLIPS---SAMPPQNGTLSPAPPPSPIDLRLLS--KSSSQSYTSLKDIL 74
           PS SPA   RR+   S   +  PP+      + PPS  D  L+S   SS  +YTSL+DI+
Sbjct: 5   PSQSPATQLRRTKSISNMTTLTPPEVPFDIASTPPSSFDYELISVKPSSFVAYTSLRDII 64

Query: 75  PS------SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQP--MSASSYSAGPNLF 132
            S      +  ++N   +   + +  +I IRNRLVKQAA +YLQP  +++S  SAG   F
Sbjct: 65  SSPINSSLNLPSINGSCSPVISTAAGDISIRNRLVKQAALSYLQPTVLTSSDDSAGSQFF 124

[Close]

BLAST of CmoCh03G011180 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 3.2e-09
Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 0


Query: 15  PSPSPANLCRRSLIPS---SAMPPQNGTLSPAPPPSPIDLRLLS--KSSSQSYTSLKDIL 74
           PS SPA   RR+   S   +  PP+      + PPS  D  L+S   SS  +YTSL+DI+
Sbjct: 5   PSQSPATQLRRTKSISNMTTLTPPEVPFDIASTPPSSFDYELISVKPSSFVAYTSLRDII 64

Query: 75  PS------SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQP--MSASSYSAGPNLF 132
            S      +  ++N   +   + +  +I IRNRLVKQAA +YLQP  +++S  SAG   F
Sbjct: 65  SSPINSSLNLPSINGSCSPVISTAAGDISIRNRLVKQAALSYLQPTVLTSSDDSAGSQFF 124

[Close]

BLAST of CmoCh03G011180 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 4.2e-09
Identity = 55/140 (39.29%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 26  SLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQS-----YTSLKDILPSSAVAVNSPT 85
           +L+  S +  +NG +S       +DL L+S + S       YTSLKDILPSS+  V+SP 
Sbjct: 5   NLMNLSLLQRRNGAVS-----QTLDLELVSVNKSSEDPLPCYTSLKDILPSSSTTVDSPA 64

Query: 86  ---AASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNLFHGLWLRFSTGNPISSC 145
              A + A SG  I IRNRLVKQAA +YLQP S  + S+ P+     +LR  + + I   
Sbjct: 65  ISFAVASAVSGPTITIRNRLVKQAACSYLQP-STPTPSSNPS-----FLRRVSSSFIRLV 124

Query: 146 LGFIRGC--IIPSIIRVFRS 156
             F      I PS  ++FR+
Sbjct: 125 SAFFDALLRIFPSPQKIFRA 133

The following BLAST results are available for this feature:

BLAST of CmoCh03G011180 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh03G011180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EDY2	1.2e-80	100.00	uncharacterized protein LOC111433319 OS=Cucurbita moschata OX=3662 GN=LOC1114333...	[more]
A0A6J1IS66	5.1e-79	98.11	uncharacterized protein LOC111478820 OS=Cucurbita maxima OX=3661 GN=LOC111478820...	[more]
A0A5A7SL81	9.7e-54	77.64	Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5D3C6C7	9.7e-54	77.64	Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CHC6	9.7e-54	77.64	uncharacterized protein LOC103500927 OS=Cucumis melo OX=3656 GN=LOC103500927 PE=...	[more]

BLAST of CmoCh03G011180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926106.1	2.5e-80	100.00	uncharacterized protein LOC111433319 [Cucurbita moschata] >KAG6604323.1 hypothet...	[more]
XP_022979075.1	1.1e-78	98.11	uncharacterized protein LOC111478820 [Cucurbita maxima]	[more]
XP_023544532.1	2.4e-78	98.14	uncharacterized protein LOC111804081 [Cucurbita pepo subsp. pepo]	[more]
XP_038883302.1	2.4e-59	81.60	uncharacterized protein LOC120074291 [Benincasa hispida]	[more]
XP_008462609.1	2.0e-53	77.64	PREDICTED: uncharacterized protein LOC103500927 [Cucumis melo] >KAA0025225.1 put...	[more]

BLAST of CmoCh03G011180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06280.1	3.2e-09	38.46	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G06280.3	3.2e-09	38.46	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52520.1	4.2e-09	39.29	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..37
None	No IPR available	PANTHER	PTHR34569:SF2	EXPRESSED PROTEIN	coord: 17..155
None	No IPR available	PANTHER	PTHR34569	EXPRESSED PROTEIN	coord: 17..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G011180.1	CmoCh03G011180.1	mRNA