CmoCh03G010710 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh03G010710
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr03: 8016741 .. 8019711 (+)
RNA-Seq ExpressionCmoCh03G010710
SyntenyCmoCh03G010710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGGCATTATTATCTGCTTTGTTATCTATAATGGGTAGCAATTAAAATGGGATATTGGGAAGATTAATGAAATGGGGAAAGCGGGGATTTATGGATTAGGGGATTTCTGTTTGCCCTTTTCTTAATCGGTTGCGAGGACAGAGGGATGAGCGGCGGGTACGGATCATCGCGAGTGCCACTGGGATTTGGAAGCTTCGGAAAGGAGGTCGTGTCATTAATGGAGAGGGCATAGAAAAGGAAACACCCGATTTGATCTTATCTCACTTGCTCCATAGTGATTATTTTAATCTCTCTCGTTCCCCATTCCCCTTTCCCTCCACCCTATTTCTGGTGCTTTCTTTTGAGAAATGGACGCGTTTCACTCAACTTGGATTCTTCCATGTCTTCTCTGTATGAATCCAGAACCGTGCGAAGTTCATACGGGGCGATGAGAGAGGGCTGAGGATATGGTGATGCCTTTTCTCCTTCTTTTTTCTCTTTTTCTTTCTCGTTTTTGATCCTCTCTGTTGCTCTGTTTTGTTTGGATCTGTTGTCCGCTGAGTTTCTTCTTACGAATCTGATTCGTTTTCTCAAAACCTGATCGATAAGAGATCGACCCTTTTGGAATAGCGACGTTTAAGGCCTAGTTTTTGTTATTGTCTACGAGATTTCTACGGTTTTGGGAAAAATCTGAGGATTCTTCGCATATAATGGGAAAGGGGAAAGACCCTTTTCGATTAAGGTAAATATATGAACGGATTAGAGAGAACCCAGACTCCAATGTTCTTGTTATCGCTGCCAATAAGAGCCCCAAAACATACCCAGAATCCAGAAACCAGGAACATGAGTCGATCGCTTGGCTAGCCCATTGCATCTAAATTATGTGTGATTTGAACAAAAGGGTTTAGCTGCTGCATCAACCCCTGTGAAATTAGCCAAAGTTTATGGAAAAATCATGAGTATATTATAGGTTAGGGAGGATATCTCCATTGATTTGTGATGTTTTGAGTGATTGTAAAAGGAAATTTATGAGAGAAACAATACCTTACCATTCTAACGTTGATGTTCCTAAACAGAGCGATAAAAGAACGCCTAGATGGTTTAGGGCGTTGGTAGATGTGGCTTGTGGCTGTTGCAGAGGGAGCTTTCTCAGACACTCTGTCTGCTTCTCTTTTCGCCTTTCCTCTTTATATTGCTGTAATTTGTCCATTAAATGCTTCGTTTCGAAGCACTCAAAAAGGCTATTATATTGATGCTGAGCTGAACCCATCTGTTTTTTTTTTTTTTTTTTTTTTTTTTCACTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACTTTCGACAATTTAATAGCTTAAATCTCTCTTTATTCTCTTCTGGGTCTTAGGATTTGGCTTTATTTGCGCGTTTCTTGTAACTTTCCCATCTGGGTTTGGCTTCAAAACGTGAAATAGCTTCACTAGATCAAGCATCATTTCTGAGAAACCTCACGATCCATATTTCCAAATGGGTTTCTCTAACTTGATGTAATTTAATTTCCTTCATTCAATGAATATAATGTCTGATACCCATTTTAATTGGTTGCTAACATAGATTGATGCGCTTTGCAGATAAGTAGGCGAGCACAGAGTGGCTGCAGAAGCACAACAACAGCCAGAGGCTTCTGCTTATCGGACCGCGCCGCTCTTGTTTGTCGCTCGTGCGCTTACAATTTCAAACACAGATCTCGAGGCCCTTTTACTCTTGTCTATAACAACTGACATCTGTTTTGCTTTTACACCATTTTTTTTGTTCCTTCCCCCGCCATTTTCTCTTATTTATTTAGAGGCCAATCTTCCTCCTCCGTTGGGTTTGAGCTCAATACAAAGCACTTGGATTAGTTTTTTTTGGGTTTGTTTTATACTTTGCTCAAAGGCGTGGGGATTGACTCTTGAGAAGTTGCATCAGCCATAATCTTAGCCGGGTCGGTGACACTCTGTTGAATATTGCTGTTGCTTTGCAGTGATCTCGAGGTATAGCCTTCGAACCTTGCTTCCTTGGGCTGTGTTTCCTGTATTTGATTATTCCAATCACTTCCTTTTGTTTTGTATTGTATTACTGAATGAAACTCGGGCCGTGATAATTGGATTACGTGCAAATATTATAGAAGTTGCTGAGTTCTTTCCTTTGCTCTCTTGTAGAATTGTTAA

mRNA sequence

TGAGGCATTATTATCTGCTTTGTTATCTATAATGGGTAGCAATTAAAATGGGATATTGGGAAGATTAATGAAATGGGGAAAGCGGGGATTTATGGATTAGGGGATTTCTGTTTGCCCTTTTCTTAATCGGTTGCGAGGACAGAGGGATGAGCGGCGGGTACGGATCATCGCGAGTGCCACTGGGATTTGGAAGCTTCGGAAAGGAGGTCGTGTCATTAATGGAGAGGGCATAGAAAAGGAAACACCCGATTTGATCTTATCTCACTTGCTCCATAGTGATTATTTTAATCTCTCTCGTTCCCCATTCCCCTTTCCCTCCACCCTATTTCTGGTGCTTTCTTTTGAGAAATGGACGCGTTTCACTCAACTTGGATTCTTCCATGTCTTCTCTGTATGAATCCAGAACCGTGCGAAGTTCATACGGGGCGATGAGAGAGGGCTGAGGATATGATAAGTAGGCGAGCACAGAGTGGCTGCAGAAGCACAACAACAGCCAGAGGCTTCTGCTTATCGGACCGCGCCGCTCTTGTTTGTCGCTCGTGCGCTTACAATTTCAAACACAGATCTCGAGGCCCTTTTACTCTTGCCAATCTTCCTCCTCCGTTGGGTTTGAGCTCAATACAAAGCACTTGGATTAGTTTTTTTTGGGTTTGTTTTATACTTTGCTCAAAGGCGTGGGGATTGACTCTTGAGAATGATCTCGAGAATTGTTAA

Coding sequence (CDS)

ATGATAAGTAGGCGAGCACAGAGTGGCTGCAGAAGCACAACAACAGCCAGAGGCTTCTGCTTATCGGACCGCGCCGCTCTTGTTTGTCGCTCGTGCGCTTACAATTTCAAACACAGATCTCGAGGCCCTTTTACTCTTGCCAATCTTCCTCCTCCGTTGGGTTTGAGCTCAATACAAAGCACTTGGATTAGTTTTTTTTGGGTTTGTTTTATACTTTGCTCAAAGGCGTGGGGATTGACTCTTGAGAATGATCTCGAGAATTGTTAA

Protein sequence

MISRRAQSGCRSTTTARGFCLSDRAALVCRSCAYNFKHRSRGPFTLANLPPPLGLSSIQSTWISFFWVCFILCSKAWGLTLENDLENC
Homology
BLAST of CmoCh03G010710 vs. NCBI nr
Match: KAG7034433.1 (hypothetical protein SDJN02_04162, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 93.6 bits (231), Expect = 9.2e-16
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0

Query: 2  ISRRAQSGCRSTTTARGFCLSDRAALVCRSCAYNFKHRSRGPFTL 47
          ISRRAQSGCRSTTTARGFCLSDRAALVCRSCAYNFKHRSRGPF+L
Sbjct: 28 ISRRAQSGCRSTTTARGFCLSDRAALVCRSCAYNFKHRSRGPFSL 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG7034433.19.2e-1697.78hypothetical protein SDJN02_04162, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G010710.1CmoCh03G010710.1mRNA