CmoCh03G010490 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G010490
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	WRKY protein
Location	Cmo_Chr03: 7826027 .. 7826987 (+)
RNA-Seq Expression	CmoCh03G010490
Synteny	CmoCh03G010490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCATCGGCGTCGGAAGAAGACTTAATAATGGCGACTCTACTGCAAGCCGAACAAGCCGCCGCTATCACCACCAATTTCGCTTCTTTCCCTGAAAACATCAATAATCTGGTTCAGCAAACCCTAAAACCCTTCCTCTTCTTCAAAGCCGACGACCAATATTCGTTACAACAACAACAACAACAACAACAACAACAACAATCGGTTTTCCCGTTCCCGTTGCCCTCAACCACCGCCACCGACACCGCCACCTCCCATCTCCTTTCCTCTCTCCTCAGATCCTCGCCTTCCTCGGTGAGGGATGCAGAAGAGAGAGGAAACGACGGAGACAACCGCAAGGGTGGATTGAGGGTGAGGACGGTGAAGATGAAGAGAATGAAAGGGAGGAGGAAAGTGAGAGAGCCTAGATTCTGCTTCAAAACCATGACGGATGTGGACGTTCTTGACGACGGTTACAAATGGAGAAAGTACGGCCAAAAAGTTGTTAAGAACACCCTCCATCCAAGGTCCATTTTCTCTTTATATATATATATTATATTCCTTTGCATGGGTTAATAACAAGTATGCCATCATCATAAATTTTTTTTATACTAAGCTTTTTATTTGTTAATGTGATATTATTTATGACTATATAAAATTAACGAAAATAAAGATGGGCAGGAGTTACTATCGTTGCACGGAAGAGAATTGTAAGGTAAAGAAACGAGTAGAAAGATTAGCAGAAGATCCGAGAATGGTAATAACGACCTACGAAGGAAGACACGCTCATTCACCGTCCGATCCTAATTTAGAACACACCAACATGGGTTGCCTCAACACTTTGTTTTGTTAGAATAATGTGCATGCTTTTATGTTTAAACTTTATGATTGTTTTGCATTGTAAATTATGTTTTAAAATCAAATAATATGTTACATATTAGGGCTGTTTTAATGAAATGAGTTACTTTTTAAAATCGTG

mRNA sequence

ATGGGATCATCGGCGTCGGAAGAAGACTTAATAATGGCGACTCTACTGCAAGCCGAACAAGCCGCCGCTATCACCACCAATTTCGCTTCTTTCCCTGAAAACATCAATAATCTGGTTCAGCAAACCCTAAAACCCTTCCTCTTCTTCAAAGCCGACGACCAATATTCGTTACAACAACAACAACAACAACAACAACAACAACAATCGGTTTTCCCGTTCCCGTTGCCCTCAACCACCGCCACCGACACCGCCACCTCCCATCTCCTTTCCTCTCTCCTCAGATCCTCGCCTTCCTCGGTGAGGGATGCAGAAGAGAGAGGAAACGACGGAGACAACCGCAAGGGTGGATTGAGGGTGAGGACGGTGAAGATGAAGAGAATGAAAGGGAGGAGGAAAGTGAGAGAGCCTAGATTCTGCTTCAAAACCATGACGGATGTGGACGTTCTTGACGACGGTTACAAATGGAGAAAGTACGGCCAAAAAGTTGTTAAGAACACCCTCCATCCAAGGAGTTACTATCGTTGCACGGAAGAGAATTGTAAGGTAAAGAAACGAGTAGAAAGATTAGCAGAAGATCCGAGAATGGTAATAACGACCTACGAAGGAAGACACGCTCATTCACCGTCCGATCCTAATTTAGAACACACCAACATGGGTTGCCTCAACACTTTGTTTTGTTAGAATAATGTGCATGCTTTTATGTTTAAACTTTATGATTGTTTTGCATTGTAAATTATGTTTTAAAATCAAATAATATGTTACATATTAGGGCTGTTTTAATGAAATGAGTTACTTTTTAAAATCGTG

Coding sequence (CDS)

ATGGGATCATCGGCGTCGGAAGAAGACTTAATAATGGCGACTCTACTGCAAGCCGAACAAGCCGCCGCTATCACCACCAATTTCGCTTCTTTCCCTGAAAACATCAATAATCTGGTTCAGCAAACCCTAAAACCCTTCCTCTTCTTCAAAGCCGACGACCAATATTCGTTACAACAACAACAACAACAACAACAACAACAACAATCGGTTTTCCCGTTCCCGTTGCCCTCAACCACCGCCACCGACACCGCCACCTCCCATCTCCTTTCCTCTCTCCTCAGATCCTCGCCTTCCTCGGTGAGGGATGCAGAAGAGAGAGGAAACGACGGAGACAACCGCAAGGGTGGATTGAGGGTGAGGACGGTGAAGATGAAGAGAATGAAAGGGAGGAGGAAAGTGAGAGAGCCTAGATTCTGCTTCAAAACCATGACGGATGTGGACGTTCTTGACGACGGTTACAAATGGAGAAAGTACGGCCAAAAAGTTGTTAAGAACACCCTCCATCCAAGGAGTTACTATCGTTGCACGGAAGAGAATTGTAAGGTAAAGAAACGAGTAGAAAGATTAGCAGAAGATCCGAGAATGGTAATAACGACCTACGAAGGAAGACACGCTCATTCACCGTCCGATCCTAATTTAGAACACACCAACATGGGTTGCCTCAACACTTTGTTTTGTTAG

Protein sequence

MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQQQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC

Homology

[Close]

BLAST of CmoCh03G010490 vs. ExPASy Swiss-Prot
Match: Q9SVB7 (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.9e-40
Identity = 74/92 (80.43%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 119 VRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEE 178
           V ++KMK++K RRKVREPRFCFKT+++VDVLDDGY+WRKYGQKVVKNT HPRSYYRCT++
Sbjct: 192 VSSLKMKKLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQD 251

Query: 179 NCKVKKRVERLAEDPRMVITTYEGRHAHSPSD 211
            C+VKKRVERLA+DPRMVITTYEGRH HSPS+
Sbjct: 252 KCRVKKRVERLADDPRMVITTYEGRHLHSPSN 283

[Close]

BLAST of CmoCh03G010490 vs. ExPASy Swiss-Prot
Match: Q93WY4 (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=WRKY12 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.1e-35
Identity = 95/198 (47.98%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 24  ITTNFASFPENINNLVQ-QTLKPFLFFKADDQYSLQQQQQQQQQQQSVFPFPLPSTTATD 83
           +T++  +  EN+N LV  +      FF +    SL             FP    S+T T 
Sbjct: 17  VTSSSTTIQENMNFLVPFEETNVLTFFSSSSSSSLSSPS---------FPIHNSSSTTTT 76

Query: 84  TATSHLLSSLLRSSP---SSVRDAEERGNDGDNRKG------GLRVRTVKMK-RMKGRRK 143
            A     ++L    P     V D +E    G N              +  MK ++K RRK
Sbjct: 77  HAPLGFSNNLQGGGPLGSKVVNDDQENFGGGTNNDAHSNSWWRSNSGSGDMKNKVKIRRK 136

Query: 144 VREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLAED 203
           +REPRFCF+T +DVDVLDDGYKWRKYGQKVVKN+LHPRSYYRCT  NC+VKKRVERL+ED
Sbjct: 137 LREPRFCFQTKSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSED 196

Query: 204 PRMVITTYEGRHAHSPSD 211
            RMVITTYEGRH H PSD
Sbjct: 197 CRMVITTYEGRHNHIPSD 205

[Close]

BLAST of CmoCh03G010490 vs. ExPASy Swiss-Prot
Match: Q9FGZ4 (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 59/131 (45.04%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 76  PSTTATDTATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVRTVKMKRMKGRRKVRE 135
           P++T+  ++++   +        +V+D EE    GD ++     +     + K ++K RE
Sbjct: 151 PNSTSVSSSSNEAANDNNSGKEVTVKDQEE----GDQQQEQKGTKPQLKAKKKNQKKARE 210

Query: 136 PRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLAEDPRM 195
            RF F T +D+D LDDGY+WRKYGQK VKN+ +PRSYYRCT   C VKKRVER ++DP +
Sbjct: 211 ARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSI 270

Query: 196 VITTYEGRHAH 207
           V+TTYEG+H H
Sbjct: 271 VMTTYEGQHTH 277

[Close]

BLAST of CmoCh03G010490 vs. ExPASy Swiss-Prot
Match: Q9FFS3 (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=WRKY24 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.6e-25
Identity = 55/95 (57.89%), Postives = 68/95 (71.58%), Query Frame = 0


Query: 123 KMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKV 182
           K K +K +R  + PR  F T +D DVLDDGY+WRKYGQK VK+  HPRSYYRCT   C V
Sbjct: 71  KGKELKEKRSRKVPRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTYHTCNV 130

Query: 183 KKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTN 218
           KK+V+RLA+DP +V+TTYEG H H P +  +E  N
Sbjct: 131 KKQVQRLAKDPNVVVTTYEGVHNH-PCEKLMETLN 164

[Close]

BLAST of CmoCh03G010490 vs. ExPASy Swiss-Prot
Match: Q9C983 (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.9e-25
Identity = 63/143 (44.06%), Postives = 90/143 (62.94%), Query Frame = 0


Query: 66  QQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEE--RGNDGDNRKGGLRVRTVK 125
           Q   V P  + S+ ++  A S  ++S   ++PS+   + E    N   + +      T  
Sbjct: 62  QTTGVKPTTVTSSCSSSAAVSVAVTS-TNNNPSATSSSSEDPAENSTASAEKTPPPETPV 121

Query: 126 MKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVK 185
            ++ K ++++R+PRF F T +DVD L+DGY+WRKYGQK VKN+  PRSYYRCT   C VK
Sbjct: 122 KEKKKAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVK 181

Query: 186 KRVERLAEDPRMVITTYEGRHAH 207
           KRVER ++DP +VITTYEG+H H
Sbjct: 182 KRVERSSDDPSIVITTYEGQHCH 203

[Close]

BLAST of CmoCh03G010490 vs. ExPASy TrEMBL
Match: A0A6J1GF73 (probable WRKY transcription factor 12 OS=Cucurbita moschata OX=3662 GN=LOC111453620 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 9.1e-122
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQ 60
           MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQ
Sbjct: 1   MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQ 60

Query: 61  QQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVR 120
           QQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVR
Sbjct: 61  QQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVR 120

Query: 121 TVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENC 180
           TVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENC
Sbjct: 121 TVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENC 180

Query: 181 KVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC 227
           KVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC
Sbjct: 181 KVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC 226

[Close]

BLAST of CmoCh03G010490 vs. ExPASy TrEMBL
Match: A0A6J1IL81 (probable WRKY transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC111478045 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 5.7e-108
Identity = 209/232 (90.09%), Postives = 212/232 (91.38%), Query Frame = 0


Query: 1   MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQ 60
           MGSSASEED+IMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSL   
Sbjct: 1   MGSSASEEDIIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSL--- 60

Query: 61  QQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEERGN------DGDNRK 120
            QQQQQQQSVFPFP P  + T TATSHLLSSLLRSSPSS+RDA E GN      DGDNRK
Sbjct: 61  -QQQQQQQSVFPFPFPFPSTTATATSHLLSSLLRSSPSSLRDAGESGNHGDGDGDGDNRK 120

Query: 121 GGLRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYR 180
           GGLRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYR
Sbjct: 121 GGLRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYR 180

Query: 181 CTEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC 227
           CTEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSD NLE TNMGCLNT FC
Sbjct: 181 CTEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSDRNLEDTNMGCLNTFFC 228

[Close]

BLAST of CmoCh03G010490 vs. ExPASy TrEMBL
Match: A0A1S3B0E1 (probable WRKY transcription factor 12 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484680 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 7.3e-63
Identity = 152/244 (62.30%), Postives = 167/244 (68.44%), Query Frame = 0


Query: 1   MGSSASEEDLIMATLLQAEQ--AAAITTNFASFPENIN------NLVQQTLKPFLFFKAD 60
           MGSSASEE++I++ L   +Q  AAA+TTN    PEN N      N+VQQ+LKP LFF   
Sbjct: 1   MGSSASEEEMIVSLLQGGDQVAAAAVTTNLICLPENNNNNNNFINVVQQSLKP-LFFTTT 60

Query: 61  DQYSLQQQQQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAE-------- 120
             +        QQQQQS+FPF  PSTT T        S LL SSPSS+ D          
Sbjct: 61  HHH--------QQQQQSLFPFCFPSTTTT--------SHLLTSSPSSLWDERGLSFMRGR 120

Query: 121 ----ERGNDGDNRKGG---LRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRK 180
                 G D D    G   LRV T+KMKR+KGR+KVREPRF FKTMTDVDVLDDGYKWRK
Sbjct: 121 NAIGNYGGDDDKENDGKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRK 180

Query: 181 YGQKVVKNTLHPRSYYRCTEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTN 222
           YGQKVVKNTLHPRSYYRCTEENCKVKKRVERLA+DPRMVITTYEGRHAHSPSD NLE   
Sbjct: 181 YGQKVVKNTLHPRSYYRCTEENCKVKKRVERLADDPRMVITTYEGRHAHSPSDHNLEDPI 227

[Close]

BLAST of CmoCh03G010490 vs. ExPASy TrEMBL
Match: A0A1S4DTC3 (probable WRKY transcription factor 12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484680 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 9.5e-63
Identity = 151/246 (61.38%), Postives = 167/246 (67.89%), Query Frame = 0


Query: 1   MGSSASEEDLIMATLLQAEQ--AAAITTNFASFPENIN------NLVQQTLKPFLFFKAD 60
           MGSSASEE++I++ L   +Q  AAA+TTN    PEN N      N+VQQ+LKP LFF   
Sbjct: 1   MGSSASEEEMIVSLLQGGDQVAAAAVTTNLICLPENNNNNNNFINVVQQSLKP-LFFTTT 60

Query: 61  DQYSLQQQQQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEER------ 120
             +        QQQQQS+FPF  PSTT T    +   SSL R  P S    +ER      
Sbjct: 61  HHH--------QQQQQSLFPFCFPSTTTTSHLLTSSPSSLWRIKPLSHTCRDERGLSFMR 120

Query: 121 --------GNDGDNRKGG---LRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKW 180
                   G D D    G   LRV T+KMKR+KGR+KVREPRF FKTMTDVDVLDDGYKW
Sbjct: 121 GRNAIGNYGGDDDKENDGKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKW 180

Query: 181 RKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEH 222
           RKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLA+DPRMVITTYEGRHAHSPSD NLE 
Sbjct: 181 RKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLADDPRMVITTYEGRHAHSPSDHNLED 237

[Close]

BLAST of CmoCh03G010490 vs. ExPASy TrEMBL
Match: A0A0A0KFC7 (WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486880 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.3e-61
Identity = 148/249 (59.44%), Postives = 169/249 (67.87%), Query Frame = 0


Query: 1   MGSSASEEDLIMATLLQAEQ------AAAITTNFASFPENIN-----NLVQQTLKPFLFF 60
           MGSSASEE++++  L   +Q      AAAITTN    PEN N     ++VQQ+LKP  F 
Sbjct: 1   MGSSASEEEMMVRLLKGGDQVAAAVNAAAITTNLICLPENNNKNNIISVVQQSLKPLFF- 60

Query: 61  KADDQYSLQQQQQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRD------- 120
                 +      QQQ+QQS+FPF  PSTT T        S LL SSPSS+ D       
Sbjct: 61  ------TTTHHHHQQQEQQSLFPFCFPSTTTT--------SHLLPSSPSSLWDERGVSFM 120

Query: 121 ----------AEERGNDGDNRKGGLRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDG 180
                      E+  N+ ++ K  LRV T+KMKR+KGR+KVREPRF FKTMTDVDVLDDG
Sbjct: 121 RGRNAIGNYGGEDDHNNENDGKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDG 180

Query: 181 YKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSDPN 222
           YKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLA+DPRMVITTYEGRHAHSPSD N
Sbjct: 181 YKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLADDPRMVITTYEGRHAHSPSDHN 234

[Close]

BLAST of CmoCh03G010490 vs. NCBI nr
Match: XP_022950553.1 (probable WRKY transcription factor 12 [Cucurbita moschata])

HSP 1 Score: 446.0 bits (1146), Expect = 1.9e-121
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQ 60
           MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQ
Sbjct: 1   MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQ 60

Query: 61  QQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVR 120
           QQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVR
Sbjct: 61  QQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVR 120

Query: 121 TVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENC 180
           TVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENC
Sbjct: 121 TVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENC 180

Query: 181 KVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC 227
           KVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC
Sbjct: 181 KVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC 226

[Close]

BLAST of CmoCh03G010490 vs. NCBI nr
Match: KAG7034406.1 (putative WRKY transcription factor 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 443.0 bits (1138), Expect = 1.6e-120
Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQ 60
           MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQ
Sbjct: 1   MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQ 60

Query: 61  QQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVR 120
           QQQQQQQQSVFPFPLPSTTAT TATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVR
Sbjct: 61  QQQQQQQQSVFPFPLPSTTATATATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVR 120

Query: 121 TVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENC 180
           TVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENC
Sbjct: 121 TVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENC 180

Query: 181 KVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC 227
           KVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC
Sbjct: 181 KVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC 226

[Close]

BLAST of CmoCh03G010490 vs. NCBI nr
Match: KAG6604249.1 (putative WRKY transcription factor 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 421.4 bits (1082), Expect = 4.9e-114
Identity = 218/226 (96.46%), Postives = 219/226 (96.90%), Query Frame = 0


Query: 1   MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQ 60
           MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKAD+QYSL  Q
Sbjct: 1   MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADEQYSL--Q 60

Query: 61  QQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVR 120
           QQQQQQQQSVFPFPLPST    TATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVR
Sbjct: 61  QQQQQQQQSVFPFPLPST----TATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVR 120

Query: 121 TVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENC 180
           TVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENC
Sbjct: 121 TVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENC 180

Query: 181 KVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC 227
           KVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHT MGCLNTLFC
Sbjct: 181 KVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTTMGCLNTLFC 220

[Close]

BLAST of CmoCh03G010490 vs. NCBI nr
Match: XP_022977891.1 (probable WRKY transcription factor 12 [Cucurbita maxima])

HSP 1 Score: 400.2 bits (1027), Expect = 1.2e-107
Identity = 209/232 (90.09%), Postives = 212/232 (91.38%), Query Frame = 0


Query: 1   MGSSASEEDLIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQQ 60
           MGSSASEED+IMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSL   
Sbjct: 1   MGSSASEEDIIMATLLQAEQAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSL--- 60

Query: 61  QQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEERGN------DGDNRK 120
            QQQQQQQSVFPFP P  + T TATSHLLSSLLRSSPSS+RDA E GN      DGDNRK
Sbjct: 61  -QQQQQQQSVFPFPFPFPSTTATATSHLLSSLLRSSPSSLRDAGESGNHGDGDGDGDNRK 120

Query: 121 GGLRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYR 180
           GGLRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYR
Sbjct: 121 GGLRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYR 180

Query: 181 CTEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC 227
           CTEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSD NLE TNMGCLNT FC
Sbjct: 181 CTEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSDRNLEDTNMGCLNTFFC 228

[Close]

BLAST of CmoCh03G010490 vs. NCBI nr
Match: XP_023544832.1 (probable WRKY transcription factor 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100
Identity = 202/231 (87.45%), Postives = 204/231 (88.31%), Query Frame = 0


Query: 1   MGSSASEEDLIMATLLQAEQ-AAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSLQQ 60
           MGSSASEED+IMATLLQAEQ AAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSL  
Sbjct: 1   MGSSASEEDIIMATLLQAEQAAAAITTNFASFPENINNLVQQTLKPFLFFKADDQYSL-- 60

Query: 61  QQQQQQQQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEERGN----DGDNRKG 120
             QQQQQQQSVFPFP P  + T TATSHLLSSL        RDA E GN    DGDNRKG
Sbjct: 61  --QQQQQQQSVFPFPFPFPSTTATATSHLLSSL--------RDAGESGNHGDCDGDNRKG 120

Query: 121 GLRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRC 180
           GLRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRC
Sbjct: 121 GLRVRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRC 180

Query: 181 TEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSDPNLEHTNMGCLNTLFC 227
           TEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSD NLE TNMGCLNT FC
Sbjct: 181 TEENCKVKKRVERLAEDPRMVITTYEGRHAHSPSDRNLEDTNMGCLNTFFC 219

[Close]

BLAST of CmoCh03G010490 vs. TAIR 10
Match: AT4G39410.1 (WRKY DNA-binding protein 13 )

HSP 1 Score: 166.8 bits (421), Expect = 2.0e-41
Identity = 74/92 (80.43%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 119 VRTVKMKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEE 178
           V ++KMK++K RRKVREPRFCFKT+++VDVLDDGY+WRKYGQKVVKNT HPRSYYRCT++
Sbjct: 192 VSSLKMKKLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQD 251

Query: 179 NCKVKKRVERLAEDPRMVITTYEGRHAHSPSD 211
            C+VKKRVERLA+DPRMVITTYEGRH HSPS+
Sbjct: 252 KCRVKKRVERLADDPRMVITTYEGRHLHSPSN 283

[Close]

BLAST of CmoCh03G010490 vs. TAIR 10
Match: AT2G44745.1 (WRKY family transcription factor )

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-36
Identity = 95/198 (47.98%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 24  ITTNFASFPENINNLVQ-QTLKPFLFFKADDQYSLQQQQQQQQQQQSVFPFPLPSTTATD 83
           +T++  +  EN+N LV  +      FF +    SL             FP    S+T T 
Sbjct: 17  VTSSSTTIQENMNFLVPFEETNVLTFFSSSSSSSLSSPS---------FPIHNSSSTTTT 76

Query: 84  TATSHLLSSLLRSSP---SSVRDAEERGNDGDNRKG------GLRVRTVKMK-RMKGRRK 143
            A     ++L    P     V D +E    G N              +  MK ++K RRK
Sbjct: 77  HAPLGFSNNLQGGGPLGSKVVNDDQENFGGGTNNDAHSNSWWRSNSGSGDMKNKVKIRRK 136

Query: 144 VREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLAED 203
           +REPRFCF+T +DVDVLDDGYKWRKYGQKVVKN+LHPRSYYRCT  NC+VKKRVERL+ED
Sbjct: 137 LREPRFCFQTKSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSED 196

Query: 204 PRMVITTYEGRHAHSPSD 211
            RMVITTYEGRH H PSD
Sbjct: 197 CRMVITTYEGRHNHIPSD 205

[Close]

BLAST of CmoCh03G010490 vs. TAIR 10
Match: AT5G49520.1 (WRKY DNA-binding protein 48 )

HSP 1 Score: 118.2 bits (295), Expect = 8.3e-27
Identity = 59/131 (45.04%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 76  PSTTATDTATSHLLSSLLRSSPSSVRDAEERGNDGDNRKGGLRVRTVKMKRMKGRRKVRE 135
           P++T+  ++++   +        +V+D EE    GD ++     +     + K ++K RE
Sbjct: 151 PNSTSVSSSSNEAANDNNSGKEVTVKDQEE----GDQQQEQKGTKPQLKAKKKNQKKARE 210

Query: 136 PRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLAEDPRM 195
            RF F T +D+D LDDGY+WRKYGQK VKN+ +PRSYYRCT   C VKKRVER ++DP +
Sbjct: 211 ARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSI 270

Query: 196 VITTYEGRHAH 207
           V+TTYEG+H H
Sbjct: 271 VMTTYEGQHTH 277

[Close]

BLAST of CmoCh03G010490 vs. TAIR 10
Match: AT1G69310.1 (WRKY DNA-binding protein 57 )

HSP 1 Score: 115.2 bits (287), Expect = 7.1e-26
Identity = 63/143 (44.06%), Postives = 90/143 (62.94%), Query Frame = 0


Query: 66  QQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEE--RGNDGDNRKGGLRVRTVK 125
           Q   V P  + S+ ++  A S  ++S   ++PS+   + E    N   + +      T  
Sbjct: 62  QTTGVKPTTVTSSCSSSAAVSVAVTS-TNNNPSATSSSSEDPAENSTASAEKTPPPETPV 121

Query: 126 MKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVK 185
            ++ K ++++R+PRF F T +DVD L+DGY+WRKYGQK VKN+  PRSYYRCT   C VK
Sbjct: 122 KEKKKAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVK 181

Query: 186 KRVERLAEDPRMVITTYEGRHAH 207
           KRVER ++DP +VITTYEG+H H
Sbjct: 182 KRVERSSDDPSIVITTYEGQHCH 203

[Close]

BLAST of CmoCh03G010490 vs. TAIR 10
Match: AT1G69310.2 (WRKY DNA-binding protein 57 )

HSP 1 Score: 115.2 bits (287), Expect = 7.1e-26
Identity = 63/143 (44.06%), Postives = 90/143 (62.94%), Query Frame = 0


Query: 66  QQQSVFPFPLPSTTATDTATSHLLSSLLRSSPSSVRDAEE--RGNDGDNRKGGLRVRTVK 125
           Q   V P  + S+ ++  A S  ++S   ++PS+   + E    N   + +      T  
Sbjct: 62  QTTGVKPTTVTSSCSSSAAVSVAVTS-TNNNPSATSSSSEDPAENSTASAEKTPPPETPV 121

Query: 126 MKRMKGRRKVREPRFCFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVK 185
            ++ K ++++R+PRF F T +DVD L+DGY+WRKYGQK VKN+  PRSYYRCT   C VK
Sbjct: 122 KEKKKAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVK 181

Query: 186 KRVERLAEDPRMVITTYEGRHAH 207
           KRVER ++DP +VITTYEG+H H
Sbjct: 182 KRVERSSDDPSIVITTYEGQHCH 203

The following BLAST results are available for this feature:

BLAST of CmoCh03G010490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVB7	2.9e-40	80.43	Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 ...	[more]
Q93WY4	2.1e-35	47.98	Probable WRKY transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=WRKY12 ...	[more]
Q9FGZ4	1.2e-25	45.04	Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 ...	[more]
Q9FFS3	7.6e-25	57.89	Probable WRKY transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=WRKY24 ...	[more]
Q9C983	9.9e-25	44.06	Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 ...	[more]

BLAST of CmoCh03G010490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GF73	9.1e-122	100.00	probable WRKY transcription factor 12 OS=Cucurbita moschata OX=3662 GN=LOC111453...	[more]
A0A6J1IL81	5.7e-108	90.09	probable WRKY transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC11147804...	[more]
A0A1S3B0E1	7.3e-63	62.30	probable WRKY transcription factor 12 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S4DTC3	9.5e-63	61.38	probable WRKY transcription factor 12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0KFC7	2.3e-61	59.44	WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486880 PE=4 S...	[more]

BLAST of CmoCh03G010490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950553.1	1.9e-121	100.00	probable WRKY transcription factor 12 [Cucurbita moschata]	[more]
KAG7034406.1	1.6e-120	99.56	putative WRKY transcription factor 13, partial [Cucurbita argyrosperma subsp. ar...	[more]
KAG6604249.1	4.9e-114	96.46	putative WRKY transcription factor 13, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022977891.1	1.2e-107	90.09	probable WRKY transcription factor 12 [Cucurbita maxima]	[more]
XP_023544832.1	1.1e-100	87.45	probable WRKY transcription factor 12 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh03G010490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39410.1	2.0e-41	80.43	WRKY DNA-binding protein 13	[more]
AT2G44745.1	1.5e-36	47.98	WRKY family transcription factor	[more]
AT5G49520.1	8.3e-27	45.04	WRKY DNA-binding protein 48	[more]
AT1G69310.1	7.1e-26	44.06	WRKY DNA-binding protein 57	[more]
AT1G69310.2	7.1e-26	44.06	WRKY DNA-binding protein 57	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 149..208 e-value: 1.1E-37 score: 141.2
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 150..206 e-value: 4.3E-25 score: 87.7
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 144..209 score: 29.309898
IPR036576	WRKY domain superfamily	GENE3D	2.20.25.80	WRKY domain	coord: 136..202 e-value: 5.3E-32 score: 111.3
IPR036576	WRKY domain superfamily	SUPERFAMILY	118290	WRKY DNA-binding domain	coord: 141..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..116
None	No IPR available	PANTHER	PTHR31221:SF17	WRKY TRANSCRIPTION FACTOR 13-RELATED	coord: 48..211
IPR044810	WRKY transcription factor, plant	PANTHER	PTHR31221	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	coord: 48..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G010490.1	CmoCh03G010490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding