CmoCh03G009500 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh03G009500
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
LocationCmo_Chr03: 7146206 .. 7149705 (-)
RNA-Seq ExpressionCmoCh03G009500
SyntenyCmoCh03G009500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCGCAGATGCATTTTCGACAAGTTTTGAAGAAAACAACAGCGTAAATCTCTTCTCCGTCGTTCGGAGTATAATCGAGTTGGAACTGTGTTCGTAACGGGGGACGAGCTAGACGGAAAACTAGTTTTCGCGTCCAATTTTGTTCATCGACGGATGGCTAATTCATTGCAGCGGATCTGGAGCAACAGTCGTGCTATTCGTGGTACTGTGGCTCCTCTCTGCAGGTCATTTTCTTCCGATTCCTTGGTTCAATTGAAGCCCGGCGAGATCGGTATGGTCTCTGGAATTCCAGACGAACACCTTACCAGAAGGGTAATAGCCCAGGCATTCATTTTTATCAATGAGTTTCTGATTGCTTGCGTTTTTGTTTAATTTCGAGGGATCGGGTTATTGGATGGTAACGATGTTTTTTTGGGGATTAGGTATTCTTATACCCGTCTGATTGGGTATTCTTGCTTGCTTTTAGCTGGGCCTTTTTTGAATGGTCTGCAGTGGCTAAACCCATTAGGTGCTACTTTGTTAATACTATGTCGAAATGTAGACGGTTCCGATAAGGAGATGGAAATATCCGGTTTATTTTTCACTACGACATTACCATTGGTGTTGATAGTCTACTGATACCCAAAAAGTTGACTAAAATAAGGTTAAAGTCTGTAGGAGCCCAAGGTTCAATCACAAAGAACAACTGCACATTTCGTTTTTCGTTTTTACACTACTGTCTATTGCTATCGGTTGCCCTCTCTCTCAAGATCCTAATCAGTTACTTGGCAGAAATCTTTTTTTTTTTTAATGTTGATTTAACAAAAGGCTTGATCAATAACTATCTCACAGTCTCTTTAAGTATTCAGGACCAATTGTTGAATCATCCATTTTTTTGGCATGAAAGGCAAGTGTTTTTTTTTTTGTTTCTTTTAAATTTTTTGGACTATTGAACTTTGTCATGTATTGAGGTTTCATCTTGTGATTCTAATATGCCGAGCCATGGCATTGAATTTTCCTGTTGTTTTAATCTTTTTCTATACAACCATCTCAATTCATTTATCTTCCTATTATGAAATTATATCAGGTTGTAATTTACTCTCCTGCTAGAACTGCATCCCAGCAAGGATCAGGCAAGGTTGGCAAGTGGAAAATCAATTTTATGTCAACGCAAAAGTATGAACCTTCTTTTCTTTCTTTTTCCTGAGTTTTATTTTTTAAAAAATCGGAAATTGTTGCTTCATTAGTTAACAGAAATTTGAACTTAGTTCTAGGAGATTCCTAGGTGCTTGAGCAAAATATTGTGCACAACATGTTTTACTGCGTAAACTTCAAGTGCCTAAAAGTTAATGATCCTTGTTCTCGTACTTTCAACAGTTGGGAGTTTTTCCCCTTATAATTTTTGTCTTTTTTTTTTTTTTTTTTACTTTTGTTGCTCTGCTCAGGCATTTCTTTTCCGTATTGCCTGTGTGTAATATTTCATTTATTTTCATAAAAGTTCGGTTTCTCATTTGAAAAAAGGAAAATACACAAACAGAAGGGTAAATAGTTTTTCTATGCTTATTGACATGTTTGTAGGTGGGAAAACCCATTGATGGGGTGGACTTCTACTGGGGACCCTTACGCCAACGTAGGGGATTCGGCACTGTCTTTTGATAGTGAGGAAGCTGCAAAGGAATTTGCTGACAAACATGGATGGGAATATGTGGTAATGCTTCGTTTAACCATTTAGAAAGGGAAAAAAATATATATAAATATATTCTTGTAATTTCTTTTTGTAGTTTGAGTTGTCATATCTTAGGTTAGTTATTAACTATGTTATTTTTCCACTGTCAGCTGCCTCCAAATATGTAACAATTATAGTTGGTGGTGTTGGTTAATTGTCCATATATTCTAATATATTCTTTTTACCATAGATCTTCGCTTTTCCACAAGGTTAAAATAATGCGTTCTAATTCTAAATAAATATAACTAAAATTAAATTGCCCTTGGACATGGTTGTTTAATATGTTTCTTCAGAATAACAAATGTGTTTCACGATTTCTGCATTTGGGCTATGATATGGCGTTTGACTCTGAATGTAAGATTTTACTTTTGAAGACAGTGGAAATGAATTCTGTTTTTTAACATCCTAGTATTAGTTTAAAGCTAAAAATTCAGAAATTTCGAGAGGAGAAATGCCAATTTTTCTTCCAAATTTGGTCCATTAGATGCAGAGAGTTTATTTTCCTTATTTAGCATTCGGTTGACATTGCATTACAATTTTATCATCATCGAATTCTGGAGAGTGGACTCTTAAAGGACTTCTTTTTCTTTTTAATTGCTTCCTTCATGTTCAGATTTAGGGATCACTTTTCTGGCCTGCATATAATTATGAGGTTACATTGAGACAATCCCCAAACTGAGGGTTAATTTCTAATTCATTCGTTGATTTTTTGTTTTTTTTCTCTCTCTCCTTTTTGTAGGTTAAGAAGCGCCACACACCACTTTTGAAGGTTTGAGATTCTTTCCCATTATTTTAACTTCGTTGAGCTTGTATTTTGTCTATACTTCTGTGAATGTAATTTGGGAGAAGAGGGGGAGGGGGGAGGAGTGGTTTGCTGGCCCTCCATAGTGTTCACACTGAACCGTAGATTGATTCGTCCCTTGAGCTCTCTGGCAGTTGTGCAAACTTCCAACTATTTTCTTGGAATGATCCTCGTGTCAAATTTCATTCTTTTATCTTATGCAACTTCTTTCATAATCTTTTAGAGTTCTGCTGGCATTTTATTGTATCCTCCGGTTTTTGTGGCCTTCAGGGCATTTGGTATGGGAATTATAAATCTTTTTTGCAATCTAGAGTCTTCTTGTGGCTAGTTTAGGGGAGCTCAGTGTCAGTTTCCAATTGGTACCAGTAGTTATTTCTTAGTATATGCTAATTCTTTCCTAGATGACTTTATATCAGTTCTCATTGTTACGACTGGAGTAGTTTAGATGCCCTACCAGCTCAGATTTCCTTTTAGATAGATGAGGAGAAGGAGGATGAAGATCTTGCTATTGGTTTGAAAGTTAATCATGTTAACATTCCAGTAATGAAGGGATTTTGATGCTGCTTTGTTTCTTAATGTCATCTAACCCTTGGATGTCTTTAGTTCACCGGGATAACCCAAAATAAAGAAACAGAAACTTATAACCCTCTGTTTTGACTGCTGCAGGTGAAGGCATATGCGGACAATTTCAAGTGGAAGGGCCATCCTGAAGCCAAGGAGGCTTAAACTTATTCTTCACTCTTTCTCGTCTAGTTGGAGGCGGAACAGACTGGAGGGTTTGTGTAGTTCATTTCGTTGCTTATTTTTGAGGAAGTTGGTTATAATAAGCGGGAACGGTGATGTTTACTCACTTGACCTTGTAACTTTTGTTCTCTTTACGTTACCATTACAGAACATCGAATGAAGTTCGTATGCATTTAAACCAGTGGTTTTTAACTTGTGGAACCCTTTTGACTTCTTCACTATTTATATACGAAACAATTGCCAAACGAA

mRNA sequence

GCTCGCAGATGCATTTTCGACAAGTTTTGAAGAAAACAACAGCGTAAATCTCTTCTCCGTCGTTCGGAGTATAATCGAGTTGGAACTGTGTTCGTAACGGGGGACGAGCTAGACGGAAAACTAGTTTTCGCGTCCAATTTTGTTCATCGACGGATGGCTAATTCATTGCAGCGGATCTGGAGCAACAGTCGTGCTATTCGTGGTACTGTGGCTCCTCTCTGCAGGTCATTTTCTTCCGATTCCTTGGTTCAATTGAAGCCCGGCGAGATCGGTATGGTCTCTGGAATTCCAGACGAACACCTTACCAGAAGGGTTGTAATTTACTCTCCTGCTAGAACTGCATCCCAGCAAGGATCAGGCAAGGTTGGCAAGTGGAAAATCAATTTTATGTCAACGCAAAAGTGGGAAAACCCATTGATGGGGTGGACTTCTACTGGGGACCCTTACGCCAACGTAGGGGATTCGGCACTGTCTTTTGATAGTGAGGAAGCTGCAAAGGAATTTGCTGACAAACATGGATGGGAATATGTGATAGATGAGGAGAAGGAGGATGAAGATCTTGCTATTGGTTTGAAAGTTAATCATGTTAACATTCCAGTGAAGGCATATGCGGACAATTTCAAGTGGAAGGGCCATCCTGAAGCCAAGGAGGCTTAAACTTATTCTTCACTCTTTCTCGTCTAGTTGGAGGCGGAACAGACTGGAGGGTTTGTGTAGTTCATTTCGTTGCTTATTTTTGAGGAAGTTGGTTATAATAAGCGGGAACGGTGATGTTTACTCACTTGACCTTGTAACTTTTGTTCTCTTTACGTTACCATTACAGAACATCGAATGAAGTTCGTATGCATTTAAACCAGTGGTTTTTAACTTGTGGAACCCTTTTGACTTCTTCACTATTTATATACGAAACAATTGCCAAACGAA

Coding sequence (CDS)

ATGGCTAATTCATTGCAGCGGATCTGGAGCAACAGTCGTGCTATTCGTGGTACTGTGGCTCCTCTCTGCAGGTCATTTTCTTCCGATTCCTTGGTTCAATTGAAGCCCGGCGAGATCGGTATGGTCTCTGGAATTCCAGACGAACACCTTACCAGAAGGGTTGTAATTTACTCTCCTGCTAGAACTGCATCCCAGCAAGGATCAGGCAAGGTTGGCAAGTGGAAAATCAATTTTATGTCAACGCAAAAGTGGGAAAACCCATTGATGGGGTGGACTTCTACTGGGGACCCTTACGCCAACGTAGGGGATTCGGCACTGTCTTTTGATAGTGAGGAAGCTGCAAAGGAATTTGCTGACAAACATGGATGGGAATATGTGATAGATGAGGAGAAGGAGGATGAAGATCTTGCTATTGGTTTGAAAGTTAATCATGTTAACATTCCAGTGAAGGCATATGCGGACAATTTCAAGTGGAAGGGCCATCCTGAAGCCAAGGAGGCTTAA

Protein sequence

MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADKHGWEYVIDEEKEDEDLAIGLKVNHVNIPVKAYADNFKWKGHPEAKEA
Homology
[Close]
BLAST of CmoCh03G009500 vs. ExPASy Swiss-Prot
Match: Q9FJW4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FRO1 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.9e-49
Identity = 94/151 (62.25%), Postives = 118/151 (78.15%), Query Frame = 0 

Query: 15  IRGTVAPLCRSFSSDSLVQ--LKPGEIGMVSGIPDEHLTRRVVIYSPARTASQQGSGKVG 74
           I  T+  + R F++D++V+   K GEIG VSGIP+EHL+R+V+IYSPARTA+Q GSGK+G
Sbjct: 13  IAATLRRVARPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKLG 72

Query: 75  KWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADKHGWEYVIDEEKE 134
           KWKINF+ST KWENPLMGWTSTGDPYANVGDSAL+FDSEEAAK FA++HGW+Y +     
Sbjct: 73  KWKINFVSTLKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVK---- 132

Query: 135 DEDLAIGLKVNHVNIPVKAYADNFKWKGHPE 164
                   K N   + VK+Y+DNFKWKG+P+
Sbjct: 133 --------KPNTPLLKVKSYSDNFKWKGNPQ 151

[Close]
BLAST of CmoCh03G009500 vs. ExPASy Swiss-Prot
Match: Q0MQH0 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gorilla gorilla gorilla OX=9595 GN=NDUFS4 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-19
Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 0 

Query: 38  EIGMVSGIPDEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGD 97
           +I  ++G+P+EH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDSALSFDSEEAAKEFADKHGWEYVIDEEKEDEDLAIGLKVNHVNIPVKAYADNF 157
           P +N+    L+F ++E A  FA+K+GW Y I+E K  +  +            K+Y  NF
Sbjct: 120 PLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKS------------KSYGANF 166

Query: 158 KW 159
            W
Sbjct: 180 SW 166

[Close]
BLAST of CmoCh03G009500 vs. ExPASy Swiss-Prot
Match: O43181 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Homo sapiens OX=9606 GN=NDUFS4 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-19
Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 0 

Query: 38  EIGMVSGIPDEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGD 97
           +I  ++G+P+EH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDSALSFDSEEAAKEFADKHGWEYVIDEEKEDEDLAIGLKVNHVNIPVKAYADNF 157
           P +N+    L+F ++E A  FA+K+GW Y I+E K  +  +            K+Y  NF
Sbjct: 120 PLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKS------------KSYGANF 166

Query: 158 KW 159
            W
Sbjct: 180 SW 166

[Close]
BLAST of CmoCh03G009500 vs. ExPASy Swiss-Prot
Match: Q9CXZ1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs4 PE=1 SV=3)

HSP 1 Score: 96.3 bits (238), Expect = 3.5e-19
Identity = 48/122 (39.34%), Postives = 73/122 (59.84%), Query Frame = 0 

Query: 38  EIGMVSGIPDEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGD 97
           +I  ++G+P+EH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDSALSFDSEEAAKEFADKHGWEYVIDEEKEDEDLAIGLKVNHVNIPVKAYADNF 157
           P +N+    L+F ++E A  FA+K+GW Y ++E+K  +  +            K+Y  NF
Sbjct: 120 PLSNM---VLTFSAKEDAIAFAEKNGWSYDVEEKKVPKPKS------------KSYGANF 166

Query: 158 KW 159
            W
Sbjct: 180 SW 166

[Close]
BLAST of CmoCh03G009500 vs. ExPASy Swiss-Prot
Match: P0CB95 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Pongo abelii OX=9601 GN=NDUFS4 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.6e-19
Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = 0 

Query: 38  EIGMVSGIPDEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGD 97
           +I  ++G+P+EH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDSALSFDSEEAAKEFADKHGWEYVIDEEKEDEDLAIGLKVNHVNIPVKAYADNF 157
           P +N+    L+F ++E A  FA+K+GW Y ++E K  +  +            K+Y  NF
Sbjct: 120 PLSNM---VLTFRTKEDAVSFAEKNGWSYDVEERKVPKPKS------------KSYGANF 166

Query: 158 KW 159
            W
Sbjct: 180 SW 166

[Close]
BLAST of CmoCh03G009500 vs. ExPASy TrEMBL
Match: A0A6J1GDQ9 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111453236 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.3e-76
Identity = 147/168 (87.50%), Postives = 149/168 (88.69%), Query Frame = 0 

Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVIDEEKEDEDLAIGLKVNHVN-IPVKAYADNFKWKGHPEAKEA 168
           HGWEYV+             K  H   + VKAYADNFKWKGHPEAKEA
Sbjct: 121 HGWEYVV-------------KKRHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]
BLAST of CmoCh03G009500 vs. ExPASy TrEMBL
Match: A0A6J1IIF4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111477781 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.6e-76
Identity = 146/168 (86.90%), Postives = 149/168 (88.69%), Query Frame = 0 

Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIWSNSRA+RGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRALRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVIDEEKEDEDLAIGLKVNHVN-IPVKAYADNFKWKGHPEAKEA 168
           HGWEYV+             K  H   + VKAYADNFKWKGHPEAKEA
Sbjct: 121 HGWEYVV-------------KKRHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]
BLAST of CmoCh03G009500 vs. ExPASy TrEMBL
Match: A0A6J1HE01 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111463327 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 133/168 (79.17%), Postives = 143/168 (85.12%), Query Frame = 0 

Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIW+   A+RGT+APLCRSFS+DSLV++KPGEIGMVSGIP+EHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAK FA+K
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVIDEEKEDEDLAIGLKVNHVN-IPVKAYADNFKWKGHPEAKEA 168
           HGWEYV+             K  H   +  KAYADNFKWKGHPE KEA
Sbjct: 121 HGWEYVV-------------KKRHTPLLKAKAYADNFKWKGHPEPKEA 155

[Close]
BLAST of CmoCh03G009500 vs. ExPASy TrEMBL
Match: A0A6J1KR46 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111496890 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 133/168 (79.17%), Postives = 143/168 (85.12%), Query Frame = 0 

Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIW+   A+RGT+APLCRSFS+DSLV++KPGEIGMVSGIP+EHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAK FA+K
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVIDEEKEDEDLAIGLKVNHVN-IPVKAYADNFKWKGHPEAKEA 168
           HGWEYV+             K  H   +  KAYADNFKWKGHPE KEA
Sbjct: 121 HGWEYVV-------------KKRHTPLLKAKAYADNFKWKGHPEPKEA 155

[Close]
BLAST of CmoCh03G009500 vs. ExPASy TrEMBL
Match: A0A6J1BSY3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005430 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.6e-69
Identity = 133/168 (79.17%), Postives = 144/168 (85.71%), Query Frame = 0 

Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIW++   +RGT+APLCRSFS+DSLVQ+KPGEIGMVSGIP+EHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWNHRCGLRGTLAPLCRSFSADSLVQVKPGEIGMVSGIPEEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAK FA+K
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVIDEEKEDEDLAIGLKVNHVN-IPVKAYADNFKWKGHPEAKEA 168
           HGW+YV+             K  H   + VKAYADNFKWKG PEAKEA
Sbjct: 121 HGWDYVV-------------KKRHTPLLKVKAYADNFKWKGPPEAKEA 155

[Close]
BLAST of CmoCh03G009500 vs. NCBI nr
Match: KAG7034286.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330.9 bits (847), Expect = 6.5e-87
Identity = 166/194 (85.57%), Postives = 167/194 (86.08%), Query Frame = 0 

Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVI---------------------------DEEKEDEDLAIGLKVNHVNIPVKAYA 168
           HGWEYV+                           DEEKEDEDLAIGLKVNHVNIPVKAYA
Sbjct: 121 HGWEYVVKKRHTPLLKSSAGILLYPPVFVAFRAFDEEKEDEDLAIGLKVNHVNIPVKAYA 180

[Close]
BLAST of CmoCh03G009500 vs. NCBI nr
Match: XP_022950018.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata] >KAG6604122.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 294.3 bits (752), Expect = 6.7e-76
Identity = 147/168 (87.50%), Postives = 149/168 (88.69%), Query Frame = 0 

Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVIDEEKEDEDLAIGLKVNHVN-IPVKAYADNFKWKGHPEAKEA 168
           HGWEYV+             K  H   + VKAYADNFKWKGHPEAKEA
Sbjct: 121 HGWEYVV-------------KKRHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]
BLAST of CmoCh03G009500 vs. NCBI nr
Match: XP_022977437.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 146/168 (86.90%), Postives = 149/168 (88.69%), Query Frame = 0 

Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIWSNSRA+RGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRALRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVIDEEKEDEDLAIGLKVNHVN-IPVKAYADNFKWKGHPEAKEA 168
           HGWEYV+             K  H   + VKAYADNFKWKGHPEAKEA
Sbjct: 121 HGWEYVV-------------KKRHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]
BLAST of CmoCh03G009500 vs. NCBI nr
Match: XP_023543137.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.5 bits (737), Expect = 3.7e-74
Identity = 143/168 (85.12%), Postives = 147/168 (87.50%), Query Frame = 0 

Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MAN LQRIWSNSRA+RGTVAP CR FSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA
Sbjct: 1   MANPLQRIWSNSRALRGTVAPFCRPFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVIDEEKEDEDLAIGLKVNHVN-IPVKAYADNFKWKGHPEAKEA 168
           HGWEYV+             K +H   + VKAYADNFKWKGHPEAKEA
Sbjct: 121 HGWEYVV-------------KKHHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]
BLAST of CmoCh03G009500 vs. NCBI nr
Match: XP_038881462.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Benincasa hispida])

HSP 1 Score: 274.6 bits (701), Expect = 5.5e-70
Identity = 136/167 (81.44%), Postives = 146/167 (87.43%), Query Frame = 0 

Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIWS+  A+RGTVAPLCRSFS+DSLVQ+KPGEIGMVSGIP+EHLTRRV+IYSPA
Sbjct: 1   MANSLQRIWSHGCALRGTVAPLCRSFSTDSLVQVKPGEIGMVSGIPEEHLTRRVIIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAK FA+K
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVIDEEKEDEDLAIGLKVNHVNIPVKAYADNFKWKGHPEAKEA 168
           HGWEYV+  +K    L          + VKAYADNFKWKG PEAKEA
Sbjct: 121 HGWEYVV--QKRHTPL----------LKVKAYADNFKWKGPPEAKEA 155

[Close]
BLAST of CmoCh03G009500 vs. TAIR 10
Match: AT5G67590.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-50
Identity = 94/151 (62.25%), Postives = 118/151 (78.15%), Query Frame = 0 

Query: 15  IRGTVAPLCRSFSSDSLVQ--LKPGEIGMVSGIPDEHLTRRVVIYSPARTASQQGSGKVG 74
           I  T+  + R F++D++V+   K GEIG VSGIP+EHL+R+V+IYSPARTA+Q GSGK+G
Sbjct: 13  IAATLRRVARPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKLG 72

Query: 75  KWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADKHGWEYVIDEEKE 134
           KWKINF+ST KWENPLMGWTSTGDPYANVGDSAL+FDSEEAAK FA++HGW+Y +     
Sbjct: 73  KWKINFVSTLKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVK---- 132

Query: 135 DEDLAIGLKVNHVNIPVKAYADNFKWKGHPE 164
                   K N   + VK+Y+DNFKWKG+P+
Sbjct: 133 --------KPNTPLLKVKSYSDNFKWKGNPQ 151

The following BLAST results are available for this feature:
BLAST of CmoCh03G009500 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FJW41.9e-4962.25NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidop... [more]
Q0MQH02.1e-1940.16NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gorilla ... [more]
O431812.1e-1940.16NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Homo sap... [more]
Q9CXZ13.5e-1939.34NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musc... [more]
P0CB954.6e-1939.34NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Pongo ab... [more]
BLAST of CmoCh03G009500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GDQ93.3e-7687.50NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit... [more]
A0A6J1IIF45.6e-7686.90NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit... [more]
A0A6J1HE011.7e-6979.17NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit... [more]
A0A6J1KR461.7e-6979.17NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit... [more]
A0A6J1BSY36.6e-6979.17NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordic... [more]
BLAST of CmoCh03G009500 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7034286.16.5e-8785.57NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, partial [C... [more]
XP_022950018.16.7e-7687.50NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucur... [more]
XP_022977437.11.1e-7586.90NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucur... [more]
XP_023543137.13.7e-7485.12NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucur... [more]
XP_038881462.15.5e-7081.44NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Benincasa ... [more]
BLAST of CmoCh03G009500 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G67590.11.4e-5062.25NADH-ubiquinone oxidoreductase-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyGENE3D3.30.160.190atu1810 like domaincoord: 52..127
e-value: 2.9E-33
score: 115.6
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrialPFAMPF04800ETC_C1_NDUFA4coord: 53..160
e-value: 1.6E-30
score: 105.2
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrialPANTHERPTHR12219NADH-UBIQUINONE OXIDOREDUCTASEcoord: 1..126
NoneNo IPR availablePANTHERPTHR12219:SF24SUBFAMILY NOT NAMEDcoord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G009500.1CmoCh03G009500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0070469 respirasome
molecular_function GO:0016651 oxidoreductase activity, acting on NAD(P)H