CmoCh03G008570 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G008570
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Epidermal patterning factor-like protein
Location	Cmo_Chr03: 6725289 .. 6725906 (-)
RNA-Seq Expression	CmoCh03G008570
Synteny	CmoCh03G008570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACCATGAATTTGGCTACTGTTTGGGCCACCTCATTACTTCTTGTGCTTGTACATCTTCTTCTTCTTCTCTCGGCCTCTCCTCCTCCCATAGTATGCCTTCTCTTTCTCTTTCTCTTCCATGGCTTTCTTTCCATTTTTTTAATGTTTCTTTTAATGACAAGTTTTTATGCTTGCTGGTTTGATCAGGGTATATCTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCGCCCATGCATGGCGGTGCAGGTGCCTAGTATGCCTCGCCGTGCCGGCCGGTTGGATTCGCCCTCGGCTTTGCCAATGAGATTTTTTGACTCGTCTCCTCAAGGGAACAGATACTCATTTTACAAGCCATTGAGTTGGAAATGCCGCTGTGGGAACCGCTTCTTCAATCCTTAGACCAAATTGCATGTCCTGTATGGAGGCTTGGTCTTCCTTTCATTCCCCCTGGTTTTGTAAATGGCATTGAATTGTTTCTTTTTTTAATAGAAGGATGGAATTCTTTGTTCAGAGAGAAGCAAGATGTTCGTTTTTATTTTTATTTTGTGACATAATTTTATAAGAAAAGTTTGATCCCAC

mRNA sequence

ATGACTACCATGAATTTGGCTACTGTTTGGGCCACCTCATTACTTCTTGTGCTTGTACATCTTCTTCTTCTTCTCTCGGCCTCTCCTCCTCCCATAGGTATATCTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCGCCCATGCATGGCGGTGCAGGTGCCTAGTATGCCTCGCCGTGCCGGCCGGTTGGATTCGCCCTCGGCTTTGCCAATGAGATTTTTTGACTCGTCTCCTCAAGGGAACAGATACTCATTTTACAAGCCATTGAGTTGGAAATGCCGCTGTGGGAACCGCTTCTTCAATCCTTAGACCAAATTGCATGTCCTGTATGGAGGCTTGGTCTTCCTTTCATTCCCCCTGGTTTTGTAAATGGCATTGAATTGTTTCTTTTTTTAATAGAAGGATGGAATTCTTTGTTCAGAGAGAAGCAAGATGTTCGTTTTTATTTTTATTTTGTGACATAATTTTATAAGAAAAGTTTGATCCCAC

Coding sequence (CDS)

ATGACTACCATGAATTTGGCTACTGTTTGGGCCACCTCATTACTTCTTGTGCTTGTACATCTTCTTCTTCTTCTCTCGGCCTCTCCTCCTCCCATAGGTATATCTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCGCCCATGCATGGCGGTGCAGGTGCCTAGTATGCCTCGCCGTGCCGGCCGGTTGGATTCGCCCTCGGCTTTGCCAATGAGATTTTTTGACTCGTCTCCTCAAGGGAACAGATACTCATTTTACAAGCCATTGAGTTGGAAATGCCGCTGTGGGAACCGCTTCTTCAATCCTTAG

Protein sequence

MTTMNLATVWATSLLLVLVHLLLLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECRPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP

Homology

[Close]

BLAST of CmoCh03G008570 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.9e-18
Identity = 53/123 (43.09%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 11  ATSLLLVLVHLLLL-------LSASPPPIG---ISFEDKTRLGSTPPSCHNKCNECRPCM 70
           +T LLL L+ +LL+       L    PPI       EDK RLGSTPPSCHN+CN C PCM
Sbjct: 7   STLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCHPCM 66

Query: 71  AVQVPSMPRRA----------GRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRF 114
           A+QVP++P R+          G +  PS+L           ++YS YKP+ WKC C   F
Sbjct: 67  AIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVL-------DQYSNYKPMGWKCHCNGHF 122

[Close]

BLAST of CmoCh03G008570 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.2e-08
Identity = 38/125 (30.40%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 5   NLATVWATSLLLVLVHLLLLLSASPPPIGISFED----------KTRLGSTPPSCHN-KC 64
           N+++     L+L   H  L+ +  P P  + F            +  +GS PP C   +C
Sbjct: 6   NMSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRC 65

Query: 65  NECRPCMAVQVPSMPRRAGRLDSP-----SALPMRFFDSSPQGNRYSFYKPLSWKCRCGN 114
             C  C A+QVP+ P+   +L SP     S+          +G+  + YKP+SWKC+CGN
Sbjct: 66  RSCGHCEAIQVPTNPQT--KLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGN 125

[Close]

BLAST of CmoCh03G008570 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.4e-05
Identity = 25/68 (36.76%), Postives = 35/68 (51.47%), Query Frame = 0


Query: 39  KTRLGSTPPSCHNKCNECRPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYK 98
           + R+GS PPSC  KC  C PC A+Q P++          S++P      SP    Y+ Y+
Sbjct: 54  RRRIGSKPPSCEKKCYGCEPCEAIQFPTI----------SSIP----HLSP---HYANYQ 104

Query: 99  PLSWKCRC 107
           P  W+C C
Sbjct: 114 PEGWRCHC 104

[Close]

BLAST of CmoCh03G008570 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.7e-05
Identity = 24/72 (33.33%), Postives = 33/72 (45.83%), Query Frame = 0


Query: 42  LGSTPPSCHNKCNECRPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLS 101
           LGS+PP C +KC  C PC  V VP           P   P+            + Y P +
Sbjct: 106 LGSSPPRCSSKCGRCTPCKPVHVP----------VPPGTPVT-----------AEYYPEA 156

Query: 102 WKCRCGNRFFNP 114
           W+C+CGN+ + P
Sbjct: 166 WRCKCGNKLYMP 156

[Close]

BLAST of CmoCh03G008570 vs. ExPASy TrEMBL
Match: A0A0A0KGR1 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G499820 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.2e-51
Identity = 101/113 (89.38%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MTTMNLATVWATSLLLVLVHLLLLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECRPCM 60
           MTTMNLATVWATSLL+VL+HLLLLLSAS PP G+ FEDKTRLGSTPPSCHNKCNEC PCM
Sbjct: 5   MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNECHPCM 64

Query: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           AVQVPSMP RA RLDSPSALPMRFFDSS QGNRYSFYKPL WKCRCGN FFNP
Sbjct: 65  AVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]

BLAST of CmoCh03G008570 vs. ExPASy TrEMBL
Match: A0A1S3B112 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484960 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.6e-50
Identity = 101/113 (89.38%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 1   MTTMNLATVWATSLLLVLVHLLLLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECRPCM 60
           MTTMNLATVWATSLL+VL+HLLLLLSAS PP GI FEDKTRLGSTPPSCHNKCNEC PCM
Sbjct: 22  MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNECHPCM 81

Query: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           AVQVPSMP RA RLDS SALPMRFFDSS QGNRYSFYKPL WKCRCGN FFNP
Sbjct: 82  AVQVPSMPGRASRLDSSSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 134

[Close]

BLAST of CmoCh03G008570 vs. ExPASy TrEMBL
Match: A0A5A7T0A6 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002950 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 7.7e-37
Identity = 73/81 (90.12%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 33  GISFEDKTRLGSTPPSCHNKCNECRPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGN 92
           GI FEDKTRLGSTPPSCHNKCNEC PCMAVQVPSMP RA RLDS SALPMRFFDSS QGN
Sbjct: 29  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRASRLDSSSALPMRFFDSSSQGN 88

Query: 93  RYSFYKPLSWKCRCGNRFFNP 114
           RYSFYKPL WKCRCGN FFNP
Sbjct: 89  RYSFYKPLGWKCRCGNHFFNP 109

[Close]

BLAST of CmoCh03G008570 vs. ExPASy TrEMBL
Match: A0A5N6QFT0 (Epidermal patterning factor-like protein OS=Carpinus fangiana OX=176857 GN=FH972_002625 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.4e-25
Identity = 61/108 (56.48%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 12  TSLLLVLVHLLLLLSAS--PPPI----GISFEDKTRLGSTPPSCHNKCNECRPCMAVQVP 71
           TSL++V+++L+   S S  PPP     G+ FE+K R+GSTPPSCHNKCN+C PCMAVQVP
Sbjct: 24  TSLVIVVLYLISPASCSNHPPPTSSPQGLLFEEKIRIGSTPPSCHNKCNQCHPCMAVQVP 83

Query: 72  SMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           +MP + G   S   +P   FD SP+GN+YS YKPL WKCRC +R +NP
Sbjct: 84  TMPSQPG-AKSAQTVPAEVFDPSPRGNKYSNYKPLGWKCRCQDRLYNP 130

[Close]

BLAST of CmoCh03G008570 vs. ExPASy TrEMBL
Match: A0A059B7S9 (Epidermal patterning factor-like protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H04752 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.2e-25
Identity = 67/108 (62.04%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 14  LLLVLVHLLLLLSASPPPI----GISFEDKTRLGSTPPSCHNKCNECRPCMAVQVPSMPR 73
           LLL+L HLLL     PPP     G+SFE+KTRLGSTPPSCHNKCN C PCMAVQVPS+P 
Sbjct: 24  LLLLLCHLLL-----PPPSFPRQGLSFEEKTRLGSTPPSCHNKCNGCHPCMAVQVPSLPA 83

Query: 74  RAGR---LDSPSALPMRFFDSSPQG-NRYSFYKPLSWKCRCGNRFFNP 114
            AGR       ++ P  F D SP    RYS YKPL WKCRC NR FNP
Sbjct: 84  AAGREKMKREEASRPAEFVDPSPASPGRYSNYKPLGWKCRCRNRLFNP 126

[Close]

BLAST of CmoCh03G008570 vs. NCBI nr
Match: KAG6604039.1 (EPIDERMAL PATTERNING FACTOR-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034205.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 230.3 bits (586), Expect = 8.1e-57
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   MTTMNLATVWATSLLLVLVHLLLLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECRPCM 60
           MTTMNLATVWATSLLLVLVHLL LLSASPPPIGISFEDKTRLGSTPPSCHNKCNEC PCM
Sbjct: 1   MTTMNLATVWATSLLLVLVHLLPLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECHPCM 60

Query: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP
Sbjct: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 113

[Close]

BLAST of CmoCh03G008570 vs. NCBI nr
Match: KGN48738.1 (hypothetical protein Csa_003101 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 8.6e-51
Identity = 101/113 (89.38%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MTTMNLATVWATSLLLVLVHLLLLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECRPCM 60
           MTTMNLATVWATSLL+VL+HLLLLLSAS PP G+ FEDKTRLGSTPPSCHNKCNEC PCM
Sbjct: 5   MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNECHPCM 64

Query: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           AVQVPSMP RA RLDSPSALPMRFFDSS QGNRYSFYKPL WKCRCGN FFNP
Sbjct: 65  AVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]

BLAST of CmoCh03G008570 vs. NCBI nr
Match: XP_008440584.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo])

HSP 1 Score: 208.4 bits (529), Expect = 3.3e-50
Identity = 101/113 (89.38%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 1   MTTMNLATVWATSLLLVLVHLLLLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECRPCM 60
           MTTMNLATVWATSLL+VL+HLLLLLSAS PP GI FEDKTRLGSTPPSCHNKCNEC PCM
Sbjct: 22  MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNECHPCM 81

Query: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           AVQVPSMP RA RLDS SALPMRFFDSS QGNRYSFYKPL WKCRCGN FFNP
Sbjct: 82  AVQVPSMPGRASRLDSSSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 134

[Close]

BLAST of CmoCh03G008570 vs. NCBI nr
Match: KAA0036313.1 (EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa] >TYK12707.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 162.9 bits (411), Expect = 1.6e-36
Identity = 73/81 (90.12%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 33  GISFEDKTRLGSTPPSCHNKCNECRPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGN 92
           GI FEDKTRLGSTPPSCHNKCNEC PCMAVQVPSMP RA RLDS SALPMRFFDSS QGN
Sbjct: 29  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRASRLDSSSALPMRFFDSSSQGN 88

Query: 93  RYSFYKPLSWKCRCGNRFFNP 114
           RYSFYKPL WKCRCGN FFNP
Sbjct: 89  RYSFYKPLGWKCRCGNHFFNP 109

[Close]

BLAST of CmoCh03G008570 vs. NCBI nr
Match: KAE7998047.1 (hypothetical protein FH972_002625 [Carpinus fangiana])

HSP 1 Score: 125.6 bits (314), Expect = 2.8e-25
Identity = 61/108 (56.48%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 12  TSLLLVLVHLLLLLSAS--PPPI----GISFEDKTRLGSTPPSCHNKCNECRPCMAVQVP 71
           TSL++V+++L+   S S  PPP     G+ FE+K R+GSTPPSCHNKCN+C PCMAVQVP
Sbjct: 24  TSLVIVVLYLISPASCSNHPPPTSSPQGLLFEEKIRIGSTPPSCHNKCNQCHPCMAVQVP 83

Query: 72  SMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           +MP + G   S   +P   FD SP+GN+YS YKPL WKCRC +R +NP
Sbjct: 84  TMPSQPG-AKSAQTVPAEVFDPSPRGNKYSNYKPLGWKCRCQDRLYNP 130

[Close]

BLAST of CmoCh03G008570 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 91.7 bits (226), Expect = 4.2e-19
Identity = 53/123 (43.09%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 11  ATSLLLVLVHLLLL-------LSASPPPIG---ISFEDKTRLGSTPPSCHNKCNECRPCM 70
           +T LLL L+ +LL+       L    PPI       EDK RLGSTPPSCHN+CN C PCM
Sbjct: 7   STLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCHPCM 66

Query: 71  AVQVPSMPRRA----------GRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRF 114
           A+QVP++P R+          G +  PS+L           ++YS YKP+ WKC C   F
Sbjct: 67  AIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVL-------DQYSNYKPMGWKCHCNGHF 122

[Close]

BLAST of CmoCh03G008570 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 5.1e-09
Identity = 38/125 (30.40%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 5   NLATVWATSLLLVLVHLLLLLSASPPPIGISFED----------KTRLGSTPPSCHN-KC 64
           N+++     L+L   H  L+ +  P P  + F            +  +GS PP C   +C
Sbjct: 6   NMSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRC 65

Query: 65  NECRPCMAVQVPSMPRRAGRLDSP-----SALPMRFFDSSPQGNRYSFYKPLSWKCRCGN 114
             C  C A+QVP+ P+   +L SP     S+          +G+  + YKP+SWKC+CGN
Sbjct: 66  RSCGHCEAIQVPTNPQT--KLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGN 125

[Close]

BLAST of CmoCh03G008570 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 48.9 bits (115), Expect = 3.1e-06
Identity = 25/68 (36.76%), Postives = 35/68 (51.47%), Query Frame = 0


Query: 39  KTRLGSTPPSCHNKCNECRPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYK 98
           + R+GS PPSC  KC  C PC A+Q P++          S++P      SP    Y+ Y+
Sbjct: 54  RRRIGSKPPSCEKKCYGCEPCEAIQFPTI----------SSIP----HLSP---HYANYQ 104

Query: 99  PLSWKCRC 107
           P  W+C C
Sbjct: 114 PEGWRCHC 104

[Close]

BLAST of CmoCh03G008570 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 48.5 bits (114), Expect = 4.1e-06
Identity = 24/72 (33.33%), Postives = 33/72 (45.83%), Query Frame = 0


Query: 42  LGSTPPSCHNKCNECRPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLS 101
           LGS+PP C +KC  C PC  V VP           P   P+            + Y P +
Sbjct: 180 LGSSPPRCSSKCGRCTPCKPVHVP----------VPPGTPVT-----------AEYYPEA 230

Query: 102 WKCRCGNRFFNP 114
           W+C+CGN+ + P
Sbjct: 240 WRCKCGNKLYMP 230

[Close]

BLAST of CmoCh03G008570 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 48.5 bits (114), Expect = 4.1e-06
Identity = 24/72 (33.33%), Postives = 33/72 (45.83%), Query Frame = 0


Query: 42  LGSTPPSCHNKCNECRPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLS 101
           LGS+PP C +KC  C PC  V VP           P   P+            + Y P +
Sbjct: 106 LGSSPPRCSSKCGRCTPCKPVHVP----------VPPGTPVT-----------AEYYPEA 156

Query: 102 WKCRCGNRFFNP 114
           W+C+CGN+ + P
Sbjct: 166 WRCKCGNKLYMP 156

The following BLAST results are available for this feature:

BLAST of CmoCh03G008570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFT5	5.9e-18	43.09	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9T068	7.2e-08	30.40	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
C4B8C4	4.4e-05	36.76	EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	5.7e-05	33.33	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of CmoCh03G008570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGR1	4.2e-51	89.38	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G499...	[more]
A0A1S3B112	1.6e-50	89.38	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484960...	[more]
A0A5A7T0A6	7.7e-37	90.12	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5N6QFT0	1.4e-25	56.48	Epidermal patterning factor-like protein OS=Carpinus fangiana OX=176857 GN=FH972...	[more]
A0A059B7S9	5.2e-25	62.04	Epidermal patterning factor-like protein OS=Eucalyptus grandis OX=71139 GN=EUGRS...	[more]

BLAST of CmoCh03G008570 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604039.1	8.1e-57	98.23	EPIDERMAL PATTERNING FACTOR-like protein 1, partial [Cucurbita argyrosperma subs...	[more]
KGN48738.1	8.6e-51	89.38	hypothetical protein Csa_003101 [Cucumis sativus]	[more]
XP_008440584.1	3.3e-50	89.38	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo]	[more]
KAA0036313.1	1.6e-36	90.12	EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa] >TYK12707....	[more]
KAE7998047.1	2.8e-25	56.48	hypothetical protein FH972_002625 [Carpinus fangiana]	[more]

BLAST of CmoCh03G008570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10310.1	4.2e-19	43.09	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G37810.1	5.1e-09	30.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13898.1	3.1e-06	36.76	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]
AT2G30370.1	4.1e-06	33.33	allergen-related	[more]
AT2G30370.2	4.1e-06	33.33	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 41..113 e-value: 1.1E-21 score: 76.5
None	No IPR available	PANTHER	PTHR33109:SF3	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 1	coord: 11..113
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 11..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G008570.1	CmoCh03G008570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane