CmoCh03G007290 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGAGGAAGGGGTTGTGGGGTTCTTTTGGTTGTTGGAATTGTGTTGAGCTTGTATTTGGTTGAGGGGGTGAAGGGTTTTGAAAGAAGTGGCAGTGTGGGTGCATCCAATGAATGGTCTGAGTTGGATGGAAGCCTGTTTGGAGGAGTTGGTGTAAGCGGGAGAAATGCGACTGTTAATGGTGGGAGAGATTCGGTTAAGCGTGGAATTACGAATGGTGGCGGGGGAGGAGGAGGAGGAGGAGGAGGAGGCGGTGGTGGTGGTGGAGAGGGAAGTGGGGTTGGGGTAAGAAAGAAAGATACGAAACATAGTAAAAAACATGGAAAAGGGGGAAGTGGCGGCGGTGGGGGAGGTGGAGGTGGAAAAGGCTATGGATGGGGAGGAGGAGGTGGCGGAGGTGGAGGGGGAGGAGGGGGAGGAGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGGAGGAGGGGGAGGAGGGGGAGGAGGTGGTGGTGGAGGAGGAGGAGGGGGAGGCGGAGGCGGAGGAAGTGGTGGAGGTTGGGGTTTTGGCGGCGGAGGGAGTAGGAGTTTTTGTTGGATATGGGGATGTGGCGGCGGTGATGGGAGGAAAGCAGGGCCTAGAAAAGAAGGCCCGAGAGAGTAG ATGGAGAGAGGAAGGGGTTGTGGGGTTCTTTTGGTTGTTGGAATTGTGTTGAGCTTGTATTTGGTTGAGGGGGTGAAGGGTTTTGAAAGAAGTGGCAGTGTGGGTGCATCCAATGAATGGTCTGAGTTGGATGGAAGCCTGTTTGGAGGAGTTGGTGTAAGCGGGAGAAATGCGACTGTTAATGGTGGGAGAGATTCGGTTAAGCGTGGAATTACGAATGGTGGCGGGGGAGGAGGAGGAGGAGGAGGAGGAGGCGGTGGTGGTGGTGGAGAGGGAAGTGGGGTTGGGGTAAGAAAGAAAGATACGAAACATAGTAAAAAACATGGAAAAGGGGGAAGTGGCGGCGGTGGGGGAGGTGGAGGTGGAAAAGGCTATGGATGGGGAGGAGGAGGTGGCGGAGGAGGTGGTGGTGGAGGAGGAGGAGGGGGAGGCGGAGGCGGAGGAAGTGGTGGAGGTTGGGGTTTTGGCGGCGGAGGGAGTAGGAGTTTTTGTTGGATATGGGGATGTGGCGGCGGTGATGGGAGGAAAGCAGGGCCTAGAAAAGAAGGCCCGAGAGAGTAG ATGGAGAGAGGAAGGGGTTGTGGGGTTCTTTTGGTTGTTGGAATTGTGTTGAGCTTGTATTTGGTTGAGGGGGTGAAGGGTTTTGAAAGAAGTGGCAGTGTGGGTGCATCCAATGAATGGTCTGAGTTGGATGGAAGCCTGTTTGGAGGAGTTGGTGTAAGCGGGAGAAATGCGACTGTTAATGGTGGGAGAGATTCGGTTAAGCGTGGAATTACGAATGGTGGCGGGGGAGGAGGAGGAGGAGGAGGAGGAGGCGGTGGTGGTGGTGGAGAGGGAAGTGGGGTTGGGGTAAGAAAGAAAGATACGAAACATAGTAAAAAACATGGAAAAGGGGGAAGTGGCGGCGGTGGGGGAGGTGGAGGTGGAAAAGGCTATGGATGGGGAGGAGGAGGTGGCGGAGGAGGTGGTGGTGGAGGAGGAGGAGGGGGAGGCGGAGGCGGAGGAAGTGGTGGAGGTTGGGGTTTTGGCGGCGGAGGGAGTAGGAGTTTTTGTTGGATATGGGGATGTGGCGGCGGTGATGGGAGGAAAGCAGGGCCTAGAAAAGAAGGCCCGAGAGAGTAG MERGRGCGVLLVVGIVLSLYLVEGVKGFERSGSVGASNEWSELDGSLFGGVGVSGRNATVNGGRDSVKRGITNGGGGGGGGGGGGGGGGGEGSGVGVRKKDTKHSKKHGKGGSGGGGGGGGGKGYGWGGGGGGGGGGGGGGGGGGGGGSGGGWGFGGGGSRSFCWIWGCGGGDGRKAGPRKEGPRE Homology
BLAST of CmoCh03G007290 vs. ExPASy TrEMBL
Match: A0A6J1ILV4 (putative glycine-rich cell wall structural protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111477646 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 2.8e-44 Identity = 149/186 (80.11%), Postives = 151/186 (81.18%), Query Frame = 0
BLAST of CmoCh03G007290 vs. ExPASy TrEMBL
Match: A0A0A0KGL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504700 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 7.2e-08 Identity = 97/158 (61.39%), Postives = 110/158 (69.62%), Query Frame = 0
BLAST of CmoCh03G007290 vs. ExPASy TrEMBL
Match: A0A067FY63 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028209mg PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 5.7e-05 Identity = 106/210 (50.48%), Postives = 119/210 (56.67%), Query Frame = 0
BLAST of CmoCh03G007290 vs. NCBI nr
Match: KAG6603927.1 (hypothetical protein SDJN03_04536, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 247.7 bits (631), Expect = 8.0e-62 Identity = 180/213 (84.51%), Postives = 182/213 (85.45%), Query Frame = 0
BLAST of CmoCh03G007290 vs. NCBI nr
Match: XP_022977280.1 (putative glycine-rich cell wall structural protein 1 [Cucurbita maxima]) HSP 1 Score: 188.3 bits (477), Expect = 5.8e-44 Identity = 149/186 (80.11%), Postives = 151/186 (81.18%), Query Frame = 0
BLAST of CmoCh03G007290 vs. NCBI nr
Match: XP_024036172.1 (putative glycine-rich cell wall structural protein 1 [Citrus clementina]) HSP 1 Score: 58.2 bits (139), Expect = 9.0e-05 Identity = 107/217 (49.31%), Postives = 121/217 (55.76%), Query Frame = 0
BLAST of CmoCh03G007290 vs. NCBI nr
Match: KDO71085.1 (hypothetical protein CISIN_1g028209mg [Citrus sinensis]) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-04 Identity = 106/210 (50.48%), Postives = 119/210 (56.67%), Query Frame = 0
BLAST of CmoCh03G007290 vs. NCBI nr
Match: XP_015389986.2 (putative glycine-rich cell wall structural protein 1 [Citrus sinensis]) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-04 Identity = 106/210 (50.48%), Postives = 119/210 (56.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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